{"meta":{"query_hash":"b0c02fb706c5","filters":{"topic":"Amoebic Infections and Treatments"},"cohort_total":309,"direct_labels_cover":0,"predictions_cover":309,"exported":309,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/b0c02fb706c5","api":"https://metacan.xera.ac/api/v1/cohort?topic=Amoebic+Infections+and+Treatments"},"results":[{"id":"W11175412","doi":"","title":"Early discharge after core liver biopsy: is it safe and cost-effective?","year":2002,"lang":"en","type":"article","venue":"PubMed","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Ambulatory; Biopsy; Emergency department; Liver biopsy; Surgery; Complication; Radiology","score_opus":0.03702060664714649,"score_gpt":0.24962605695244258,"score_spread":0.2126054503052961,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W11175412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9696605,0.0006617849,0.000032006246,0.00084275624,0.00018461853,0.0024128996,0.000027561424,0.00003320647,0.026144642],"genre_scores_gemma":[0.96907586,0.000110519504,0.000052776046,0.0005887231,0.0001137435,0.0048446427,0.0000044643466,0.00001558849,0.025193702],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992963,0.000013923132,0.00009774862,0.00021226882,0.000109356304,0.00027039615],"domain_scores_gemma":[0.99955875,0.00003201804,0.00002800315,0.00017162848,0.000035486897,0.00017410362],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00005611839,0.00012341718,0.00016284283,0.00007164266,0.00007069937,0.000022399441,0.000020170655,0.00006779444,0.0013922942],"category_scores_gemma":[0.000025659285,0.00009161091,0.000058180583,0.000110206325,0.000067688845,0.000090924776,0.000026997255,0.00009886775,0.0004164465],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000101787125,0.00034456843,0.69185656,0.000032577827,0.00020376129,0.00015837692,0.00056444964,2.452503e-8,0.0000057909165,0.000060339535,0.0069095124,0.29976222],"study_design_scores_gemma":[0.0014981901,0.00006853271,0.9540808,0.000014075616,0.00012710928,0.00013722971,0.000012237888,0.00004507335,0.000050521598,0.00001816321,0.04385677,0.00009130056],"about_ca_topic_score_codex":0.000082093095,"about_ca_topic_score_gemma":0.0000046049836,"teacher_disagreement_score":0.29967093,"about_ca_system_score_codex":0.00006272341,"about_ca_system_score_gemma":0.000002825739,"threshold_uncertainty_score":0.99952054},"labels":[],"label_agreement":null},{"id":"W1138516355","doi":"10.1096/fasebj.29.1_supplement.507.3","title":"<i>Entamoeba histolytica</i> Induces Pro‐Inflammatory Mediator HMGB1 Release in Early Contact with Macrophage","year":2015,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"HMGB1; Secretion; Entamoeba histolytica; Microbiology; Biology; Virulence; Macrophage; Extracellular; Cell biology; Innate immune system; Cysteine protease; Inflammation; Immunology; Immune system; Cysteine; Biochemistry; In vitro","score_opus":0.01881016447703114,"score_gpt":0.24873219872151914,"score_spread":0.22992203424448798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1138516355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99424446,0.00041764535,0.000015088032,0.00054906606,0.00021349381,0.0003449881,0.0000031961101,0.000018757977,0.004193314],"genre_scores_gemma":[0.9987439,0.00004061144,0.000106443586,0.0001995152,0.00021093395,0.000021225631,0.000002855122,0.000022950719,0.0006515467],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99878395,0.00010933164,0.00030338854,0.00013775546,0.00036263478,0.0003029646],"domain_scores_gemma":[0.9991929,0.00005013124,0.00014084818,0.00021138297,0.00009260582,0.00031216157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005123833,0.00015589394,0.00025106154,0.00017618787,0.000091929796,0.000031764786,0.00009766053,0.000068245434,0.00008902809],"category_scores_gemma":[0.00007816704,0.000086261534,0.00005527865,0.00021350896,0.0000876469,0.00016712816,0.000021349533,0.0006395961,0.00009628556],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014953569,0.00061970373,0.979453,0.000021963335,0.00014726086,0.0072367825,0.002800917,0.00002200505,0.005334232,0.0001804031,0.0008128978,0.001875472],"study_design_scores_gemma":[0.03122349,0.0034595113,0.92646277,0.00087824964,0.00043536592,0.009152793,0.0035804715,0.00017733527,0.021418205,0.00050675834,0.002211031,0.00049399387],"about_ca_topic_score_codex":0.00019758944,"about_ca_topic_score_gemma":0.00013761522,"teacher_disagreement_score":0.052990213,"about_ca_system_score_codex":0.000503723,"about_ca_system_score_gemma":0.0005250125,"threshold_uncertainty_score":0.35176432},"labels":[],"label_agreement":null},{"id":"W128027646","doi":"10.1155/2013/802545","title":"<i>Streptococcus anginosus</i> Pyogenic Liver Abscess following a Screening Colonoscopy","year":2013,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke","funders":"","keywords":"Streptococcus anginosus; Pyogenic liver abscess; Medicine; Colonoscopy; Liver abscess; Streptococcus intermedius; Abscess; Microbiology; Gastroenterology; Internal medicine; Surgery; Streptococcus; Bacteria; Biology; Colorectal cancer","score_opus":0.005214875561108864,"score_gpt":0.229372743933168,"score_spread":0.22415786837205914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W128027646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99366593,0.0040472047,0.00028971187,0.0005886176,0.00056330755,0.0002814064,0.000024080331,0.000015803298,0.000523956],"genre_scores_gemma":[0.9978224,0.00017696303,0.00009420804,0.0015202534,0.00024169995,0.000016266531,0.000018672505,0.00001590193,0.00009360513],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989925,0.000054441516,0.0003294675,0.00015927655,0.000073393916,0.00039090103],"domain_scores_gemma":[0.99791884,0.00008891501,0.00013179975,0.000104477345,0.00016740244,0.0015885825],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009978735,0.00015829793,0.00040136336,0.00026645503,0.00020589,0.00003265567,0.00006953201,0.00018627611,0.0016620631],"category_scores_gemma":[0.00026203302,0.000120379795,0.0002476666,0.00014180403,0.00023756173,0.00009373692,0.000017616814,0.0002700849,0.000037285456],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045030727,0.0001489201,0.96601737,0.000049159597,0.0008263137,0.0023173657,0.00010645013,0.000002188701,0.0011570576,0.00006060139,0.007424449,0.02184511],"study_design_scores_gemma":[0.013678648,0.004762907,0.89227605,0.0011602074,0.002189098,0.028222378,0.00044915907,0.000109202396,0.00037625476,0.00038666342,0.055707376,0.0006820857],"about_ca_topic_score_codex":0.0075822384,"about_ca_topic_score_gemma":0.0025697781,"teacher_disagreement_score":0.07374133,"about_ca_system_score_codex":0.00013997039,"about_ca_system_score_gemma":0.0011803743,"threshold_uncertainty_score":0.99925053},"labels":[],"label_agreement":null},{"id":"W133991913","doi":"10.1155/2003/829860","title":"Necrotizing Lung Infection Caused by the Protozoan <i>Balantidium coli</i>","year":2003,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Bronchoalveolar lavage; Lung; Biology; Genitourinary system; Microbiology; Parasite hosting; Peritoneal cavity; Protozoan parasite; Doxycycline; Pathology; Medicine; Antibiotics; Anatomy; Internal medicine","score_opus":0.004518715363554175,"score_gpt":0.2293549662454634,"score_spread":0.22483625088190923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W133991913","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932817,0.0027743212,0.00030270743,0.00097539,0.00077976787,0.00049553096,0.000038205617,0.00001425785,0.0013381063],"genre_scores_gemma":[0.9976415,0.00032380663,0.00000617504,0.0016901486,0.00014683898,0.000021146703,0.000016078513,0.000014914094,0.00013941072],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989741,0.00015178075,0.00032031426,0.00014027883,0.00007530657,0.00033822592],"domain_scores_gemma":[0.99848485,0.00008823223,0.00015129754,0.00011336056,0.00016666965,0.0009956016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025043782,0.00015129808,0.0003107856,0.00015263927,0.0003487524,0.000029382518,0.000038704362,0.00016727147,0.0004632876],"category_scores_gemma":[0.000561057,0.00009519061,0.00013618561,0.00017091894,0.0003437934,0.000052324343,0.000007341565,0.00035192532,0.0000069982707],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003984709,0.00020313168,0.965683,0.00007175374,0.0004636168,0.0005370518,0.000105570354,0.0000017228792,0.0016354152,0.0005192057,0.028390797,0.0023489257],"study_design_scores_gemma":[0.011646414,0.0029102657,0.25262424,0.00064478023,0.001673323,0.062021073,0.00020544583,0.000030503737,0.0014587023,0.00042667412,0.66582096,0.0005376162],"about_ca_topic_score_codex":0.0041474327,"about_ca_topic_score_gemma":0.0033947367,"teacher_disagreement_score":0.7130587,"about_ca_system_score_codex":0.00020561088,"about_ca_system_score_gemma":0.0016702573,"threshold_uncertainty_score":0.6269706},"labels":[],"label_agreement":null},{"id":"W14693744","doi":"10.5167/uzh-139094","title":"Caudal vena cava thrombosis-like syndrome in a horse","year":2010,"lang":"en","type":"article","venue":"PubMed","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Medicine; Thrombosis; Pneumonia; Horse; Surgery; Vena cava; Inferior vena cava; Venous thrombosis; Internal medicine; Biology","score_opus":0.017339053970072692,"score_gpt":0.24752208517637717,"score_spread":0.23018303120630448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W14693744","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9853306,0.000029457797,0.0000036463284,0.0005918783,0.0007512916,0.00061164144,0.000005401463,0.00005304638,0.012623035],"genre_scores_gemma":[0.9964318,0.000009610014,0.00008880047,0.00025521358,0.000070905735,0.0009190086,0.000011146279,0.000015890679,0.0021975723],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99925166,0.000013116939,0.00013391847,0.00017322131,0.000120807665,0.00030724908],"domain_scores_gemma":[0.99954456,0.000020239502,0.000028836805,0.00024280795,0.000024041847,0.00013950019],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001367537,0.00009800827,0.0001844503,0.00012595166,0.000042020874,0.000010283083,0.000038270893,0.00013122248,0.00013496002],"category_scores_gemma":[0.000058224992,0.00007924827,0.00005654631,0.00019428217,0.000048776317,0.00004760901,0.000021500622,0.0003568954,0.00013134116],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053898733,0.001022782,0.95378387,0.0000512066,0.00020083481,0.00085078535,0.00026760896,0.0000012241763,0.0002384197,0.0005394004,0.0018031449,0.041186847],"study_design_scores_gemma":[0.0012525993,0.000042678574,0.9924955,0.000008581748,0.000051846127,0.00037397858,0.000017490422,0.0000069936686,0.00010513674,0.00010243813,0.0054694307,0.00007333888],"about_ca_topic_score_codex":0.000419547,"about_ca_topic_score_gemma":0.00043649838,"teacher_disagreement_score":0.041113507,"about_ca_system_score_codex":0.00006821325,"about_ca_system_score_gemma":0.00003384116,"threshold_uncertainty_score":0.32316506},"labels":[],"label_agreement":null},{"id":"W1505420129","doi":"10.1111/j.1742-4658.2009.07234.x","title":"The effect of <i>hfq</i> on global gene expression and virulence in <i>Neisseria gonorrhoeae</i>","year":2009,"lang":"en","type":"article","venue":"FEBS Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Public Health Agency of Canada","keywords":"Neisseria gonorrhoeae; Biology; Virulence; Microbiology; Mutant; Cell biology; Gene; Genetics","score_opus":0.004434581719034974,"score_gpt":0.270008227977494,"score_spread":0.26557364625845903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1505420129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99523336,0.0009009986,0.00005105978,0.00025634692,0.00015263662,0.00013702155,0.0000023482414,0.0000065111512,0.0032597298],"genre_scores_gemma":[0.99913836,0.00044794148,0.00015024384,0.0001046457,0.00009019411,0.0000026677478,9.098283e-7,0.0000035822093,0.000061431136],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994363,0.00006940824,0.00017850466,0.000090721005,0.00007543193,0.0001496005],"domain_scores_gemma":[0.9996274,0.00006221285,0.0000851703,0.000120167715,0.000024273486,0.000080781014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024425902,0.000093132185,0.00016149714,0.000034400036,0.0001508186,0.000020546106,0.000042924654,0.000043763113,0.000014166713],"category_scores_gemma":[0.000052537667,0.000048867532,0.000051357903,0.000119141136,0.000033699605,0.0000540705,0.000010592439,0.0001696837,0.0000072878165],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030981326,0.00036511337,0.7788705,0.000024308962,0.0000707392,0.00014142532,0.000101984595,0.00006015258,0.05416358,0.0001545275,0.0016583368,0.16129117],"study_design_scores_gemma":[0.0076279584,0.008152186,0.89806193,0.00066043716,0.000105562314,0.0031959924,0.000036109785,0.00007493315,0.07863861,0.0008643405,0.002444149,0.0001377694],"about_ca_topic_score_codex":0.00000959296,"about_ca_topic_score_gemma":0.000003059878,"teacher_disagreement_score":0.16115339,"about_ca_system_score_codex":0.00006978944,"about_ca_system_score_gemma":0.00002632521,"threshold_uncertainty_score":0.19927602},"labels":[],"label_agreement":null},{"id":"W1518556167","doi":"10.1371/journal.ppat.1004887","title":"The NLRP3 Inflammasome Is a Pathogen Sensor for Invasive Entamoeba histolytica via Activation of α5β1 Integrin at the Macrophage-Amebae Intercellular Junction","year":2015,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Innovates","keywords":"Entamoeba histolytica; Inflammasome; Integrin; Cell biology; Biology; Integrin alpha M; Extracellular; Microbiology; Receptor; Immunology; Inflammation; Biochemistry","score_opus":0.034954482090965265,"score_gpt":0.2574246735778588,"score_spread":0.22247019148689354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1518556167","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927169,0.00019149433,0.0023178947,0.0012764263,0.00034874782,0.0016149099,0.00011108524,0.000045975507,0.0013765353],"genre_scores_gemma":[0.9915217,0.000066730616,0.00053118676,0.00025972605,0.00022288968,0.00031381764,0.00014309809,0.000048990772,0.0068918164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984915,0.00010911099,0.0004252255,0.0003144797,0.0003543428,0.00030531976],"domain_scores_gemma":[0.9981184,0.0003622816,0.00027418535,0.0005969971,0.00050469127,0.00014345546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003248475,0.00023995824,0.0003101141,0.00009682061,0.00033076623,0.000020917672,0.000113534275,0.00014070532,0.0001297174],"category_scores_gemma":[0.00060613104,0.0001362953,0.00024648473,0.00021678959,0.0001929332,0.00008571354,0.000103171566,0.00019753214,0.00017821351],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013515942,0.0007483416,0.02016805,0.00015229138,0.0009246013,0.000064057225,0.0044882013,0.000018026449,0.9554858,0.00020534679,0.0044190744,0.011974601],"study_design_scores_gemma":[0.0066612572,0.0026151945,0.013441224,0.0003146603,0.0019887714,0.0003467275,0.0040914263,0.0024917298,0.92196226,0.0010917975,0.04449893,0.0004959889],"about_ca_topic_score_codex":0.000077208955,"about_ca_topic_score_gemma":0.000064877924,"teacher_disagreement_score":0.04007986,"about_ca_system_score_codex":0.0006320661,"about_ca_system_score_gemma":0.00016399194,"threshold_uncertainty_score":0.5557961},"labels":[],"label_agreement":null},{"id":"W1527183840","doi":"10.1096/fasebj.28.1_supplement.152.4","title":"<i>Entamoeba histolytica</i> evades innate immunity by triggering the degradation of macrophage cytoskeletal‐associated proteins (152.4)","year":2014,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Entamoeba histolytica; Innate immune system; Biology; Immune system; Macrophage; Cell biology; Inflammation; Actin cytoskeleton; Cytoskeleton; Microbiology; Immunity; Immunology; Mucus; Cell; In vitro","score_opus":0.011203492392800154,"score_gpt":0.24471417595517497,"score_spread":0.2335106835623748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1527183840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937448,0.00031231734,0.0015612342,0.0008832341,0.0001637742,0.0003629655,0.000014381558,0.000025593708,0.0029317117],"genre_scores_gemma":[0.9972695,0.00009303819,0.000091007074,0.00016585989,0.00007854,0.000013955597,0.000022777389,0.000019104476,0.0022462038],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987077,0.00031255512,0.00034792864,0.00009059457,0.00030949814,0.00023172736],"domain_scores_gemma":[0.99901694,0.00013774095,0.00034404412,0.00029384193,0.00012542451,0.0000820169],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010111984,0.00014160702,0.00023664215,0.000060386294,0.0006290038,0.000033938253,0.00015821186,0.00006129996,0.00015718861],"category_scores_gemma":[0.00025128145,0.000072190924,0.00015415161,0.00022337923,0.00016941992,0.000095889496,0.000039753748,0.00052601006,0.000021732349],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005283546,0.001736675,0.02487779,0.00007980358,0.0015140241,0.000043789427,0.00117052,0.000057600944,0.9239441,0.0007778117,0.0046066977,0.040662803],"study_design_scores_gemma":[0.014199943,0.0029866064,0.06302345,0.0006919708,0.0022997847,0.002395698,0.0012977666,0.0036210872,0.8969099,0.0017252708,0.010271936,0.00057658064],"about_ca_topic_score_codex":0.00022819336,"about_ca_topic_score_gemma":0.000013662059,"teacher_disagreement_score":0.04008622,"about_ca_system_score_codex":0.00023338004,"about_ca_system_score_gemma":0.00007736462,"threshold_uncertainty_score":0.4837852},"labels":[],"label_agreement":null},{"id":"W1541681122","doi":"10.1096/fasebj.28.1_supplement.152.3","title":"Unraveling the mechanism on how <i>Entamoeba histolytica</i> evokes MUC2 exocytosis (152.3)","year":2014,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Mucin; Exocytosis; Secretion; Entamoeba histolytica; Biology; Mucus; Cell biology; Microbiology; Goblet cell; Cysteine protease; Epithelium; Proteases; Biochemistry","score_opus":0.01829214981183475,"score_gpt":0.24117939272207764,"score_spread":0.2228872429102429,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1541681122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9443394,0.00023775332,0.013089317,0.022473829,0.0014295591,0.00041290472,0.000006647815,0.00007864226,0.017931938],"genre_scores_gemma":[0.99269,0.000102417594,0.00028521003,0.0023279267,0.00080085965,0.000011182895,0.0000029887804,0.000027738806,0.0037516742],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988051,0.00015702334,0.00019104187,0.00014732082,0.00038941845,0.00031006514],"domain_scores_gemma":[0.99898183,0.00022001065,0.00015079662,0.0004056303,0.00009346706,0.00014826297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068465405,0.00018036878,0.00021467164,0.00008233976,0.00092294515,0.00008969036,0.0001720453,0.00006114808,0.00022713504],"category_scores_gemma":[0.00013849339,0.00008206947,0.00020362699,0.00012974768,0.000099590456,0.0000639033,0.0000359909,0.00055155065,0.00018803065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028490478,0.0049430537,0.041706797,0.00019343481,0.0068972833,0.0013308071,0.010895315,0.0006752045,0.3681938,0.22936752,0.098845646,0.23410207],"study_design_scores_gemma":[0.030255241,0.011865079,0.033348564,0.0021598109,0.008644596,0.036501206,0.010327635,0.019025378,0.6147976,0.05923242,0.17161061,0.0022318596],"about_ca_topic_score_codex":0.0000368824,"about_ca_topic_score_gemma":0.000010459227,"teacher_disagreement_score":0.24660377,"about_ca_system_score_codex":0.00020203393,"about_ca_system_score_gemma":0.00006843919,"threshold_uncertainty_score":0.70986414},"labels":[],"label_agreement":null},{"id":"W1551268106","doi":"10.1111/j.1478-3231.2011.02562.x","title":"Amoebic liver abscess in USA: a population‐based study of incidence, temporal trends and mortality","year":2011,"lang":"en","type":"article","venue":"Liver International","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Agencja Badań Medycznych; Canadian Institutes of Health Research; Alberta Innovates - Health Solutions","keywords":"Medicine; Interquartile range; Incidence (geometry); Confidence interval; Odds ratio; Epidemiology; Population; Mortality rate; Pediatrics; Demography; Internal medicine; Surgery; Environmental health","score_opus":0.0635101062118831,"score_gpt":0.3369474422502754,"score_spread":0.27343733603839226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1551268106","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925055,0.000015923633,0.0000381297,0.000009941299,0.00012059903,0.00014634796,0.000011551386,0.000008266866,0.0071437224],"genre_scores_gemma":[0.998663,0.000003249471,0.00038829562,0.000031399635,0.000031717038,0.000022692922,0.00003285014,0.000005660724,0.00082111696],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999286,0.000026018177,0.00022307239,0.00016591304,0.00022431184,0.00007469689],"domain_scores_gemma":[0.99965274,0.000019004356,0.0000907854,0.000118709126,0.000079697216,0.000039082304],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000081346814,0.000083657964,0.00014610612,0.0003179806,0.000025709965,0.0000056542726,0.000054122986,0.000038106115,0.0018590363],"category_scores_gemma":[0.00001538891,0.00007158185,0.000035156947,0.0001594332,0.000028540639,0.0001279091,0.000034073204,0.00007217586,0.0000134661095],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008932704,0.0014429843,0.9961487,0.0000089052355,0.00010568906,0.00009970537,0.00064148306,0.000004872297,0.0000050928934,0.00021806579,0.000015224966,0.0012199382],"study_design_scores_gemma":[0.001907506,0.00025025636,0.9963687,0.00003169124,0.00006213048,0.0000122307565,0.000087768,0.0011245939,0.0000344422,0.00005279462,0.0000118792195,0.000055985423],"about_ca_topic_score_codex":0.021662012,"about_ca_topic_score_gemma":0.007171887,"teacher_disagreement_score":0.014490125,"about_ca_system_score_codex":0.000070783375,"about_ca_system_score_gemma":0.00002269224,"threshold_uncertainty_score":0.9990534},"labels":[],"label_agreement":null},{"id":"W1565857616","doi":"10.4000/vertigo.3369","title":"Parasitoses intestinales dans la zone du complexe hydroagricole du Sourou au Burkina Faso","year":2004,"lang":"fr","type":"article","venue":"VertigO","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Geology","score_opus":0.01139288971978391,"score_gpt":0.248701598130066,"score_spread":0.2373087084102821,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1565857616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9297093,0.0021003494,0.020726066,0.0025968777,0.0016639525,0.00043057065,0.000044165532,0.00016889148,0.042559795],"genre_scores_gemma":[0.9900521,0.00036922368,0.0018042009,0.00022348893,0.0014233406,0.000050098864,0.000059508442,0.000054248794,0.005963806],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99809796,0.00012240827,0.0003896092,0.00042496374,0.0002864322,0.00067860656],"domain_scores_gemma":[0.9987688,0.00026112894,0.00012197564,0.00040668983,0.000107678265,0.00033371008],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001446281,0.00038923114,0.00045672877,0.0001397325,0.00046110764,0.000052879717,0.00014841053,0.00018925242,0.00036125229],"category_scores_gemma":[0.00022095615,0.00034461796,0.0002238878,0.00041357704,0.0005823419,0.00016786582,0.00009838922,0.00030512025,0.0016055872],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010621592,0.003396842,0.9390889,0.00017124032,0.00046769244,0.0023509571,0.0028993099,0.0010320733,0.0013894981,0.041561324,0.0021933187,0.0053426432],"study_design_scores_gemma":[0.007678,0.0020218468,0.8112823,0.0018785653,0.0010809696,0.0055037425,0.0017950101,0.0008835602,0.004485247,0.0021171882,0.16059184,0.0006817647],"about_ca_topic_score_codex":0.0067148698,"about_ca_topic_score_gemma":0.0011757911,"teacher_disagreement_score":0.15839852,"about_ca_system_score_codex":0.0009533145,"about_ca_system_score_gemma":0.0004633869,"threshold_uncertainty_score":0.9999006},"labels":[],"label_agreement":null},{"id":"W1570056882","doi":"10.1155/2012/852835","title":"A Review of Amoebic Liver Abscess for Clinicians in a Nonendemic Setting","year":2012,"lang":"en","type":"review","venue":"Canadian Journal of Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"St. Michael's Hospital; University of Toronto; University Health Network; Toronto General Hospital; St Joseph's Health Centre; University of Manitoba","funders":"","keywords":"Entamoeba histolytica; Amoebic liver abscess; Medicine; Liver abscess; Complication; Abscess; Intensive care medicine; Dermatology; Gastroenterology; Immunology; Internal medicine; General surgery; Surgery","score_opus":0.06673147411606327,"score_gpt":0.36316535950625745,"score_spread":0.29643388539019416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1570056882","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002612309,0.9979501,0.00009994783,0.00013221228,0.0005119567,0.0007970212,0.00010316547,0.0000018146161,0.00014259804],"genre_scores_gemma":[0.0010387796,0.9969953,0.0006221353,0.00085043965,0.00032316838,0.000039111685,0.0000435012,0.00003972639,0.000047891615],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99754727,0.00020183281,0.0014805171,0.00015650697,0.00007909863,0.00053477805],"domain_scores_gemma":[0.99754614,0.00013810926,0.0013907528,0.00021639155,0.00023737307,0.00047122908],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00085342996,0.00025961048,0.0025011662,0.0008055786,0.000034133514,0.0000034040308,0.00016451676,0.0002357369,0.00015850809],"category_scores_gemma":[0.00020847713,0.00020243264,0.00083876326,0.00016019163,0.00010667446,0.000053725937,0.000012055519,0.0005840854,0.000009522435],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017491504,0.00025434708,0.06273952,0.20333962,0.0016601186,0.00088428264,0.00010876671,5.322498e-7,1.2074953e-7,0.000026400035,0.0056996285,0.7251117],"study_design_scores_gemma":[0.0012317138,0.0013631838,0.0009844056,0.15995485,0.0039756596,0.0067955824,0.000010785807,0.0000011293063,3.5797573e-8,0.0000046069513,0.82559836,0.000079704645],"about_ca_topic_score_codex":0.0008424244,"about_ca_topic_score_gemma":0.011839457,"teacher_disagreement_score":0.8198987,"about_ca_system_score_codex":0.00045010814,"about_ca_system_score_gemma":0.0018075414,"threshold_uncertainty_score":0.8254964},"labels":[],"label_agreement":null},{"id":"W1582151198","doi":"10.1111/j.1365-2958.2007.05979.x","title":"Novel mitochondrion‐related organelles in the anaerobic amoeba <i>Mastigamoeba balamuthi</i>","year":2007,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"","keywords":"Organelle; Biology; Eukaryote; Entamoeba histolytica; Mitochondrion; Amoeba (genus); Proteome; Entamoeba; Cell biology; Biochemistry; Gene; Genetics; Genome","score_opus":0.006313179855845396,"score_gpt":0.24075251711330836,"score_spread":0.23443933725746297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1582151198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882996,0.0006181778,0.0050917235,0.0009931185,0.0003123624,0.0005964719,0.000013485013,0.000057395893,0.00401767],"genre_scores_gemma":[0.9948959,0.000014484707,0.001904918,0.0023861646,0.000038081216,0.000016213815,0.00023837274,0.000028191902,0.00047769002],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986594,0.00007677938,0.0003802012,0.0003529384,0.00006442119,0.00046629246],"domain_scores_gemma":[0.9992866,0.00009115782,0.00008351117,0.0004048596,0.00006524247,0.00006863586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034912772,0.0002214992,0.00030326194,0.00021188022,0.0000990046,0.000010563179,0.00014175719,0.00027740884,0.00012528927],"category_scores_gemma":[0.00006823731,0.00015146249,0.00013649097,0.0005569071,0.00019972175,0.000024742641,0.000047178535,0.00037764024,0.00019602582],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005189255,0.00045946566,0.006307521,0.0000075036523,0.00013223564,0.0006518739,0.00039536008,0.0000151541435,0.9901461,0.0010106076,0.00046306453,0.00035919392],"study_design_scores_gemma":[0.025243368,0.002813952,0.15313034,0.00030514476,0.0012459072,0.03285913,0.0031123837,0.000066749584,0.65617126,0.00078504905,0.12270258,0.0015641629],"about_ca_topic_score_codex":0.00013743997,"about_ca_topic_score_gemma":0.000084065614,"teacher_disagreement_score":0.3339749,"about_ca_system_score_codex":0.00008615873,"about_ca_system_score_gemma":0.000066255074,"threshold_uncertainty_score":0.6176461},"labels":[],"label_agreement":null},{"id":"W1710056516","doi":"10.1155/2007/106946","title":"Pylephlebitis and Pyogenic Liver Abscesses: A Complication of Hemorrhoidal Banding","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Medicine; Complication; Surgery; Diabetes mellitus; Pyogenic liver abscess; Abscess; Liver abscess","score_opus":0.012541795470112981,"score_gpt":0.24533471761203474,"score_spread":0.23279292214192177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1710056516","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951076,0.00028712576,0.003610235,0.00028999677,0.00012258957,0.00006731509,0.000006589675,0.0000018911969,0.0005066819],"genre_scores_gemma":[0.99866694,0.000038039572,0.0009259913,0.00023958497,0.00007857143,5.8457437e-7,0.0000032056312,0.000007038296,0.00004005814],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993901,0.000017182294,0.0002680265,0.00006717986,0.000052831234,0.00020464532],"domain_scores_gemma":[0.9992509,0.00002443703,0.00017447093,0.00007236901,0.00014574378,0.0003320803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001791861,0.0000645026,0.00021518338,0.0003163427,0.000050217655,0.000004487181,0.00003600928,0.000044074637,0.00010567875],"category_scores_gemma":[0.000030131925,0.000056921217,0.00005744554,0.000060611983,0.00012494219,0.000044960303,0.0000050396366,0.00011122768,0.0000024084095],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023023516,0.000036063393,0.9952774,0.000023177447,0.00012197352,0.0004544744,0.00012523982,0.0000021091798,0.0007268873,0.00009729275,0.00021849207,0.0026866323],"study_design_scores_gemma":[0.0021008991,0.0024554366,0.9792576,0.00007667182,0.00015784062,0.013910997,0.0000981753,0.000024499359,0.00044793158,0.000050307022,0.0013862663,0.000033370292],"about_ca_topic_score_codex":0.0015278772,"about_ca_topic_score_gemma":0.014258649,"teacher_disagreement_score":0.016019817,"about_ca_system_score_codex":0.00010321938,"about_ca_system_score_gemma":0.00014157654,"threshold_uncertainty_score":0.7956661},"labels":[],"label_agreement":null},{"id":"W176841883","doi":"10.1096/fasebj.22.1_supplement.320.8","title":"Induction of immune tolerance through an IL‐10 dependent mechanism allows Entamoeba histolytica successful cololization in the colon","year":2008,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Entamoeba histolytica; Immune system; Antigen; Biology; Apoptosis; Population; Immune tolerance; Immunology; Microbiology; Medicine","score_opus":0.02735932296255198,"score_gpt":0.27674711037447114,"score_spread":0.24938778741191917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W176841883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951251,0.00016869219,0.001332324,0.00058186165,0.00032184785,0.0003485974,0.000004479336,0.000011464212,0.0021056377],"genre_scores_gemma":[0.9985572,0.0004376777,0.00021464938,0.00017286678,0.00015849982,0.000017021566,0.000014085387,0.000011637741,0.00041637142],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988165,0.00019036779,0.00036389535,0.00011051708,0.0003450375,0.00017368804],"domain_scores_gemma":[0.9993085,0.000043220636,0.00023698987,0.0002447322,0.00012642676,0.000040123552],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042871045,0.00011316803,0.00020271586,0.00007352954,0.00038802437,0.000013917234,0.0001373427,0.000071747745,0.00030049038],"category_scores_gemma":[0.000035934052,0.0000638735,0.000081592385,0.00022085485,0.00010404581,0.00025114894,0.000016457052,0.0003210704,0.00001518109],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0056759226,0.013099281,0.15635017,0.00015837721,0.0013217428,0.0027392497,0.07426605,0.0033537399,0.6923289,0.040165577,0.001979182,0.00856186],"study_design_scores_gemma":[0.024768053,0.009261273,0.39194405,0.00061932666,0.0015364635,0.05071815,0.017131547,0.003889815,0.48201543,0.013519921,0.0037713945,0.00082454795],"about_ca_topic_score_codex":0.0003413534,"about_ca_topic_score_gemma":0.000086165346,"teacher_disagreement_score":0.2355939,"about_ca_system_score_codex":0.00020651035,"about_ca_system_score_gemma":0.00012633545,"threshold_uncertainty_score":0.32901588},"labels":[],"label_agreement":null},{"id":"W1798514207","doi":"10.14740/jmc.v6i11.2326","title":"Unusual Presentation of Streptococcus anginosus With Severe Sepsis, Liver Abscess Secondary to Biliary Tract Perforation","year":2015,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Streptococcus anginosus; Medicine; Liver abscess; Perforation; Bacteremia; Sepsis; Abscess; Gastroenterology; Internal medicine; Surgery; Microbiology; Streptococcus; Antibiotics; Bacteria","score_opus":0.036401859070472005,"score_gpt":0.33656170362737364,"score_spread":0.30015984455690164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1798514207","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966292,0.00031407192,0.0005467209,0.0009756286,0.00017797605,0.00022417655,0.000013064353,0.000007831478,0.0011113341],"genre_scores_gemma":[0.9987649,0.00004342022,0.000514651,0.00016953448,0.00032909168,0.000005037672,0.000014807393,0.000009710043,0.00014887734],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99837327,0.000056591336,0.00036518014,0.00009280667,0.0009974517,0.00011468906],"domain_scores_gemma":[0.9986506,0.0001370817,0.00022634967,0.00009839087,0.00045998383,0.0004276123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003775962,0.00009795307,0.00026662528,0.00018029966,0.000033792167,0.000010573509,0.00005700248,0.00009396783,0.0006146267],"category_scores_gemma":[0.00044031165,0.000060403327,0.00007599764,0.00019054016,0.000059924158,0.00020225038,0.000016843836,0.00023937228,0.000008184151],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004960067,0.0049328245,0.7566779,0.0005197189,0.0010108136,0.018974727,0.0037038985,0.0006708795,0.00025302422,0.000095660056,0.053891525,0.15430894],"study_design_scores_gemma":[0.022565987,0.025339415,0.8736412,0.0019229492,0.0015483543,0.04775503,0.009712383,0.0011959246,0.008156346,0.00009460336,0.0076549654,0.00041286138],"about_ca_topic_score_codex":0.00015250531,"about_ca_topic_score_gemma":0.00004517987,"teacher_disagreement_score":0.15389608,"about_ca_system_score_codex":0.00009686343,"about_ca_system_score_gemma":0.000884766,"threshold_uncertainty_score":0.67297316},"labels":[],"label_agreement":null},{"id":"W1833915969","doi":"10.1373/clinchem.2013.216606","title":"Where Has All the β1-Transferrin Gone?","year":2014,"lang":"en","type":"article","venue":"Clinical Chemistry","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University; The Scarborough Hospital; Horizon Health Network; Dr. Everett Chalmers Regional Hospital; Dalhousie University","funders":"","keywords":"Transferrin; Medicine; Internal medicine","score_opus":0.06536920259253975,"score_gpt":0.36885014253305626,"score_spread":0.3034809399405165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1833915969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89650285,0.00014889329,0.00020495003,0.006778128,0.00016987028,0.000121213976,0.0000040540644,0.000062422856,0.09600762],"genre_scores_gemma":[0.98853844,0.00007488739,0.00012363252,0.00076502014,0.00060492824,0.000014902666,0.000020222682,0.000014192029,0.009843789],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.999099,0.000036934423,0.00035727312,0.0002270561,0.000116685405,0.00016302706],"domain_scores_gemma":[0.9989619,0.0002921521,0.000046318506,0.0005103594,0.000047051006,0.00014217675],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00039331886,0.00010863911,0.00023802926,0.0000037736281,0.000091318674,0.000018162415,0.0000911408,0.00016919176,0.0011844374],"category_scores_gemma":[0.00030881292,0.00006319248,0.00022648403,0.00004713659,0.00022218157,0.000014890436,0.000025412444,0.0003604514,0.00035814155],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025827755,0.0020552576,0.8878397,0.00031383324,0.0007740133,0.000068702175,0.000103797516,0.000003624558,0.0022785128,0.00026208887,0.07154352,0.034498695],"study_design_scores_gemma":[0.0036071166,0.00027130885,0.05880793,0.000112679096,0.00039307566,0.00012210822,0.00006419732,0.00018597806,0.0071144267,0.00045182364,0.928682,0.00018733756],"about_ca_topic_score_codex":0.000010294541,"about_ca_topic_score_gemma":0.0000036320896,"teacher_disagreement_score":0.8571385,"about_ca_system_score_codex":0.00002149166,"about_ca_system_score_gemma":0.000051032814,"threshold_uncertainty_score":0.9997286},"labels":[],"label_agreement":null},{"id":"W1928337022","doi":"10.1096/fasebj.29.1_supplement.507.2","title":"<i>Entamoeba histolytica</i> ‐Induced Caspase‐4/11 Activation Elicits a Pro‐Inflammatory Response in Macrophages","year":2015,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Inflammasome; Entamoeba histolytica; Caspase; Chemokine; Secretion; Caspase 1; Biology; Inflammation; Tumor necrosis factor alpha; Mucus; Pyroptosis; Cell biology; Cytokine; Immunology; Microbiology; Apoptosis; Programmed cell death; Biochemistry","score_opus":0.03833255793101618,"score_gpt":0.2936610781367529,"score_spread":0.2553285202057367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1928337022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99538404,0.00008983894,0.000105645435,0.0022521142,0.00026026895,0.00036364273,0.0000023546215,0.000032069285,0.0015100184],"genre_scores_gemma":[0.9976098,0.0000120674,0.00011949524,0.00039201495,0.00025080488,0.000022220214,0.0000037836453,0.000023481363,0.00156632],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986437,0.00026714746,0.00031732328,0.00013898686,0.00035516138,0.000277669],"domain_scores_gemma":[0.9990755,0.000110621055,0.00016766688,0.00025519833,0.0001611712,0.00022988442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010597697,0.00015425905,0.0002055583,0.00021279715,0.00018976314,0.000035302848,0.00008834843,0.000079092155,0.00009334201],"category_scores_gemma":[0.00033762463,0.00009787051,0.000084385334,0.00024178105,0.00005905116,0.0001609752,0.000029903942,0.00042927338,0.00010434859],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016975893,0.0017020308,0.20404948,0.000050085768,0.00042520603,0.004893755,0.0072562597,0.0002010462,0.7444733,0.0003308502,0.00987506,0.009767049],"study_design_scores_gemma":[0.025527073,0.0035982688,0.47536853,0.0007794043,0.00046538605,0.017150698,0.0047205533,0.00088046887,0.4634472,0.0009255357,0.0064742095,0.0006626757],"about_ca_topic_score_codex":0.00010643435,"about_ca_topic_score_gemma":0.000026893325,"teacher_disagreement_score":0.28102607,"about_ca_system_score_codex":0.00074071577,"about_ca_system_score_gemma":0.0005100709,"threshold_uncertainty_score":0.39910436},"labels":[],"label_agreement":null},{"id":"W1942863297","doi":"10.5489/cuaj.2155","title":"Klebsiella pneumonia-induced prostate abscess: How to work it up?","year":2014,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Soonchunhyang University","keywords":"Medicine; Pyogenic liver abscess; Abscess; Prostate; Liver abscess; Pneumonia; Klebsiella pneumonia; Radiology; Surgery; Internal medicine; Pseudomonas aeruginosa; Cancer; Bacteria","score_opus":0.013827258779626053,"score_gpt":0.23573870358169757,"score_spread":0.22191144480207153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1942863297","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8725945,0.000015077855,0.00014821418,0.116661996,0.0007047071,0.00025465828,0.0000084266085,0.000033960067,0.009578505],"genre_scores_gemma":[0.98174715,0.000010728292,0.00017177212,0.009516068,0.00055210263,0.00001655159,0.000009933494,0.000014159702,0.00796156],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986414,0.00012317329,0.00021597579,0.00019690824,0.00028709948,0.0005354428],"domain_scores_gemma":[0.99824035,0.00010415004,0.00016384081,0.00012480299,0.00028002332,0.0010868087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005326284,0.0001440769,0.00025073884,0.00019564509,0.00037131805,0.00014468996,0.00007936417,0.0002098214,0.00043960716],"category_scores_gemma":[0.001015059,0.00011037618,0.0001163829,0.00034045705,0.000012289674,0.00007199008,0.000011965839,0.00047797526,0.00042381557],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054797903,0.000062205814,0.9410714,0.0000030189278,0.00016611417,0.00009903025,0.00025172904,0.000028512628,0.00022340601,0.0001459032,0.044685625,0.0132082645],"study_design_scores_gemma":[0.00096746546,0.0005027904,0.73407215,0.000020102741,0.00007314944,0.0001494431,0.00006151986,0.000041222655,0.000033642245,0.00031671967,0.26362774,0.00013407021],"about_ca_topic_score_codex":0.0004725005,"about_ca_topic_score_gemma":0.00088690146,"teacher_disagreement_score":0.2189421,"about_ca_system_score_codex":0.0010710274,"about_ca_system_score_gemma":0.00028369212,"threshold_uncertainty_score":0.5447433},"labels":[],"label_agreement":null},{"id":"W1964998086","doi":"10.1016/j.ajpath.2012.11.035","title":"Entamoeba histolytica Exacerbates Epithelial Tight Junction Permeability and Proinflammatory Responses in Muc2 Mice","year":2013,"lang":"en","type":"article","venue":"American Journal Of Pathology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Innovates; Crohn's and Colitis Foundation of Canada; Crohn's and Colitis Foundation","keywords":"Entamoeba histolytica; Proinflammatory cytokine; Tight junction; Permeability (electromagnetism); Biology; Microbiology; Immunology; Pathology; Cancer research; Medicine; Cell biology; Inflammation; Genetics","score_opus":0.006932949416560842,"score_gpt":0.25007115194478846,"score_spread":0.24313820252822763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964998086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99781483,0.00016595828,0.000072521536,0.0010261385,0.00015534599,0.00019200445,0.0000015713096,0.000009774712,0.00056184037],"genre_scores_gemma":[0.9976718,0.00009053103,0.0016485748,0.00017029454,0.00009349037,0.000013507342,0.0000010669426,0.000011006639,0.00029976285],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989661,0.0002294456,0.0003753324,0.00014848515,0.00010425099,0.00017636637],"domain_scores_gemma":[0.99919134,0.00014612832,0.00027377432,0.00012639671,0.00014863572,0.00011373635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032149628,0.00011116052,0.0003755522,0.0002367764,0.00004544714,0.0000068967115,0.000035420177,0.00004704896,0.00017361421],"category_scores_gemma":[0.00022746311,0.000081872386,0.00006762359,0.00012928956,0.00048364222,0.00011255908,0.000019062434,0.00023002092,0.000026412179],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009487462,0.00049633667,0.86851203,0.000025619867,0.00008084173,0.0011128825,0.0012207718,0.000001693965,0.051223498,0.00007659167,0.00021866254,0.07608231],"study_design_scores_gemma":[0.0016043945,0.002657045,0.9836296,0.00004206468,0.00009396296,0.00832503,0.0012039363,0.000031260075,0.0011321796,0.000322391,0.00087149057,0.00008664179],"about_ca_topic_score_codex":0.00015202328,"about_ca_topic_score_gemma":0.0000138389405,"teacher_disagreement_score":0.115117565,"about_ca_system_score_codex":0.00016933038,"about_ca_system_score_gemma":0.00013391691,"threshold_uncertainty_score":0.3338659},"labels":[],"label_agreement":null},{"id":"W1965521224","doi":"10.14740/jocmr2131w","title":"Seroepidemiology of Entamoeba histolytica Infection in General Population in Rural Durango, Mexico","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Medicine Research","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Entamoeba histolytica; Seroprevalence; Medicine; Serology; Rural area; Population; Cross-sectional study; Environmental health; Antibody; Demography; Immunology","score_opus":0.3549058576505192,"score_gpt":0.5917264289815609,"score_spread":0.23682057133104173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965521224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99020875,0.00038605524,0.000080339465,0.0059752446,0.00067273504,0.0002651748,5.6820187e-7,0.0000042454235,0.0024068821],"genre_scores_gemma":[0.9975063,0.0007820214,0.00039928942,0.00013217109,0.00091134175,0.00000546136,0.000007810484,0.000011551694,0.00024402412],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9951119,0.0012757654,0.0023588184,0.00014703385,0.0007919366,0.00031457705],"domain_scores_gemma":[0.9965385,0.0015854868,0.00051379506,0.00019996992,0.0007981796,0.00036407204],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.013404732,0.00010719461,0.0011021589,0.0010772967,0.000023376371,0.0000021063772,0.00008294134,0.00023467348,0.00011053124],"category_scores_gemma":[0.016728086,0.00007030986,0.00015944667,0.0007353698,0.00032416027,0.00011926751,0.000040922274,0.0012970807,0.00000987189],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001325063,0.0007163908,0.9834314,0.00003455403,0.000055899927,0.00017239928,0.00012547575,0.00005434503,0.00007420585,0.00028488156,0.0020128181,0.011712591],"study_design_scores_gemma":[0.009207102,0.0047993325,0.9808465,0.0005634862,0.000045800032,0.00031210648,0.00016235803,0.00085894787,0.00004125077,0.00219289,0.0009254784,0.00004473469],"about_ca_topic_score_codex":0.00549022,"about_ca_topic_score_gemma":0.0005336467,"teacher_disagreement_score":0.011667856,"about_ca_system_score_codex":0.00046284925,"about_ca_system_score_gemma":0.00040907995,"threshold_uncertainty_score":0.99155444},"labels":[],"label_agreement":null},{"id":"W1971498878","doi":"10.1096/fj.03-0578fje","title":"Regulation of Toll‐like receptor‐2 expression by the Gal‐lectin of <i>Entamoeba histolytica</i>","year":2003,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"C-type lectin; Lectin; Entamoeba histolytica; Proinflammatory cytokine; Molecular biology; Biology; Receptor; CD69; Signal transduction; Cell biology; Immune system; Microbiology; Biochemistry; T cell; Immunology; Inflammation","score_opus":0.012015192085431474,"score_gpt":0.24716128653766475,"score_spread":0.23514609445223328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971498878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98396873,0.0007093973,0.0012770562,0.0005750421,0.0005005982,0.00023732203,0.00000569439,0.000009605912,0.012716539],"genre_scores_gemma":[0.9938252,0.00008162826,0.00039752686,0.000086661064,0.00005872314,0.0000035097228,0.0000047764843,0.000011139019,0.0055308426],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990638,0.00015941229,0.00029618185,0.000076223834,0.00027337926,0.00013102272],"domain_scores_gemma":[0.9992081,0.00009689446,0.00027897838,0.0002459576,0.000112688576,0.000057407447],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043972867,0.00009021237,0.00017146002,0.000046561363,0.0002315702,0.0000073830865,0.00006991812,0.000046747864,0.0007741902],"category_scores_gemma":[0.00008367799,0.000043775373,0.00011535336,0.00014806923,0.000116144634,0.000052642572,0.0000118115395,0.00021458181,0.000011916237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022454321,0.0003756604,0.013046895,0.000016038623,0.00013498068,0.000003336983,0.00055721984,0.00002903106,0.9170436,0.00034007028,0.066034906,0.0021936756],"study_design_scores_gemma":[0.0020655522,0.0004161208,0.00400409,0.00017623544,0.00024871022,0.0009548848,0.0005747624,0.000042962012,0.9719963,0.00045565513,0.018990107,0.00007461503],"about_ca_topic_score_codex":0.000022101925,"about_ca_topic_score_gemma":0.0000017298222,"teacher_disagreement_score":0.05495266,"about_ca_system_score_codex":0.00009661177,"about_ca_system_score_gemma":0.000080573096,"threshold_uncertainty_score":0.84768397},"labels":[],"label_agreement":null},{"id":"W1973779126","doi":"10.1128/iai.69.8.4874-4883.2001","title":"Characterization of a Stress-Induced Alternate Sigma Factor, RpoS, of <i>Coxiella burnetii</i> and Its Expression during the Development Cycle","year":2001,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; National Institute of Allergy and Infectious Diseases","keywords":"rpoS; Sigma factor; Coxiella burnetii; Biology; Complementation; Molecular biology; Gene expression; Genetics; Gene; Mutant; Microbiology; Promoter","score_opus":0.018159576544034356,"score_gpt":0.2618831833995556,"score_spread":0.24372360685552122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973779126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99880916,0.000049077633,0.00007347227,0.000018254388,0.00007360272,0.00022698619,0.0000053187036,0.000018173796,0.0007259632],"genre_scores_gemma":[0.9992304,0.0005386109,0.000011174373,0.00001013469,0.000017751532,0.000010493972,0.000014890024,0.000006857884,0.00015967307],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99948555,0.0000513247,0.00020454942,0.00008814876,0.00008886253,0.000081577906],"domain_scores_gemma":[0.9996087,0.000021446063,0.00013524762,0.00011475488,0.00008185124,0.00003800041],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007021155,0.000088325025,0.00014493888,0.00007196231,0.00018124408,0.000008589359,0.000018669507,0.000051691033,0.000057041758],"category_scores_gemma":[0.000020951868,0.000060528935,0.0000246817,0.00010295655,0.000026080643,0.00009394706,0.000043171698,0.00010225933,0.0000012416269],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006590783,0.00017596298,0.2704664,0.00006741573,0.000041494895,0.0000010044723,0.0006122635,0.0000016639455,0.7250866,0.000007680632,1.6383558e-7,0.0034733973],"study_design_scores_gemma":[0.00057509576,0.000077746496,0.5563466,0.00009562526,0.000013714053,0.00002912263,0.000028820597,0.00003464376,0.44267017,0.0000038055318,0.000092691706,0.000031989905],"about_ca_topic_score_codex":0.00026328524,"about_ca_topic_score_gemma":0.000023132166,"teacher_disagreement_score":0.28588018,"about_ca_system_score_codex":0.000024375295,"about_ca_system_score_gemma":0.000019700248,"threshold_uncertainty_score":0.24682984},"labels":[],"label_agreement":null},{"id":"W1974414406","doi":"10.1016/j.crad.2006.03.010","title":"Imaging of hepatic infections","year":2006,"lang":"en","type":"review","venue":"Clinical Radiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Mount Sinai Hospital","funders":"","keywords":"Medicine; Immunosuppression; Tuberculosis; Population; Malaria; Echinococcus granulosus; Echinococcosis; Pathology; Immunology","score_opus":0.09285654089080113,"score_gpt":0.4800779342833457,"score_spread":0.3872213933925446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974414406","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013781333,0.9875736,0.00025509554,0.000023480023,0.0009098399,0.0004966108,0.000015514277,0.000045868343,0.010542143],"genre_scores_gemma":[0.0005514682,0.99744666,0.00024185047,0.000049794784,0.00051591685,0.00006323815,0.00020537221,0.00003037163,0.00089533563],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978921,0.00029070055,0.001252464,0.00031299662,0.00005585586,0.00019591146],"domain_scores_gemma":[0.99771416,0.0012619335,0.00043690263,0.00042057803,0.00007657934,0.000089843175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031952834,0.00021803228,0.0024725834,0.00018354015,0.000044119188,0.0000023752366,0.00006105465,0.00038914892,0.00015342246],"category_scores_gemma":[0.0007200082,0.00015121636,0.0010912309,0.0002117053,0.00034728672,0.000015436937,0.000038172868,0.000508374,0.00019890406],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000040182595,0.0006596871,0.05663372,0.0020492,0.0005196684,0.00007106438,0.0000012290014,1.6795566e-7,1.0578596e-8,0.00028548422,0.0031202938,0.93665546],"study_design_scores_gemma":[0.000538171,0.00042878065,0.0026620405,0.0019559204,0.0032241049,0.0012169612,6.743018e-7,0.0000079125875,2.516433e-8,0.00014612402,0.9897151,0.000104167746],"about_ca_topic_score_codex":0.00006197889,"about_ca_topic_score_gemma":0.00000641416,"teacher_disagreement_score":0.9865948,"about_ca_system_score_codex":0.000081726066,"about_ca_system_score_gemma":0.00034784942,"threshold_uncertainty_score":0.6166424},"labels":[],"label_agreement":null},{"id":"W1976386072","doi":"10.2214/ajr.07.2888","title":"Imaging-Guided Percutaneous Needle Aspiration or Catheter Drainage of Neonatal Liver Abscesses: 14-Year Experience","year":2008,"lang":"en","type":"article","venue":"American Journal of Roentgenology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Percutaneous; Surgery; Catheter; Abscess; Radiology","score_opus":0.019822658539768875,"score_gpt":0.2818215362438219,"score_spread":0.261998877704053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976386072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99611723,0.0002393185,0.0021709919,0.00020737067,0.00016948812,0.00010825949,0.000003911258,0.000011733963,0.00097169227],"genre_scores_gemma":[0.9950663,0.00020018614,0.003963741,0.00028898436,0.000092486356,0.0000030911885,0.0000029838445,0.000017062519,0.00036518797],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99894917,0.000057132434,0.0004346087,0.00013763897,0.00020607417,0.00021537635],"domain_scores_gemma":[0.9988374,0.000051012405,0.0004827209,0.00019108952,0.00033085208,0.00010693556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000064539876,0.00013062352,0.00042135533,0.00022621747,0.00008564314,0.0000042089723,0.000103155086,0.000032484404,0.00051587657],"category_scores_gemma":[0.00009956836,0.00009312183,0.00013919988,0.0002280824,0.0006298365,0.00011998231,0.000029055078,0.0001637999,0.000022325556],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0056649516,0.0039989124,0.6643622,0.00012934282,0.0019686176,0.051197264,0.0742082,0.00026360125,0.030370018,0.00031314834,0.0030862784,0.16443746],"study_design_scores_gemma":[0.010049834,0.049600605,0.11119461,0.00029771664,0.0010943988,0.75423056,0.041572183,0.0005220455,0.014695021,0.00017189374,0.015780708,0.00079040736],"about_ca_topic_score_codex":0.0002799937,"about_ca_topic_score_gemma":0.000008936096,"teacher_disagreement_score":0.7030333,"about_ca_system_score_codex":0.000088745466,"about_ca_system_score_gemma":0.000195649,"threshold_uncertainty_score":0.56484866},"labels":[],"label_agreement":null},{"id":"W1976584444","doi":"10.1016/j.exppara.2010.03.005","title":"The immunopathogenesis of Entamoeba histolytica","year":2010,"lang":"en","type":"review","venue":"Experimental Parasitology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":175,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Health Sciences Centre","funders":"Canadian Institutes of Health Research","keywords":"Entamoeba histolytica; Biology; Dysentery; Immunology; Immune system; Disease; Malaria; Amoebiasis; Parasitic disease; Parasite hosting; Plasmodium (life cycle); Entamoeba; Microbiology; Medicine; Pathology","score_opus":0.029870040866993856,"score_gpt":0.41784312334051127,"score_spread":0.3879730824735174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976584444","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00077740184,0.9891912,0.0000035849857,0.000016809905,0.0013098248,0.000750987,0.000015649865,0.000029226885,0.0079053445],"genre_scores_gemma":[0.0027477953,0.99510133,0.00018917865,0.000015263131,0.00015046436,0.0003084076,0.000081043065,0.00004921076,0.0013572817],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985771,0.00011049657,0.0005815211,0.00030238417,0.00014411482,0.0002843772],"domain_scores_gemma":[0.99869174,0.00019256822,0.00033179653,0.0006619504,0.000037521513,0.00008444713],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000092669005,0.00033630466,0.0013930296,0.00010722152,0.00021687454,0.000007764143,0.00017123777,0.00040504488,0.00021123805],"category_scores_gemma":[0.00003013964,0.00019868181,0.00060428685,0.00013843253,0.00043761055,0.000018784896,0.00007928175,0.00036301886,0.00025769198],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007204269,0.0009669363,0.00046148692,0.0009109419,0.0008255021,0.00015350715,0.000073691095,8.180779e-9,0.0006076134,0.0017847901,0.0006164111,0.99352705],"study_design_scores_gemma":[0.0004000591,0.0003721774,0.0000905295,0.0005212174,0.0008862728,0.0018049364,0.000041684078,2.7356677e-7,0.0009865635,0.0000065484455,0.9947466,0.00014310682],"about_ca_topic_score_codex":0.000041775642,"about_ca_topic_score_gemma":0.0000055464734,"teacher_disagreement_score":0.9941302,"about_ca_system_score_codex":0.00018362439,"about_ca_system_score_gemma":0.00024533505,"threshold_uncertainty_score":0.81020087},"labels":[],"label_agreement":null},{"id":"W1977088559","doi":"10.1111/1556-4029.12564","title":"Death Due to Complications of Anhidrotic Ectodermal Dysplasia","year":2014,"lang":"en","type":"article","venue":"Journal of Forensic Sciences","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Office of the Chief Medical Examiner","funders":"","keywords":"Ectodermal dysplasia; Etiology; Medicine; Diaper Dermatitis; SWEAT; Dermatology; Complication; Pediatrics; Surgery; Pathology; Internal medicine","score_opus":0.031217703541624432,"score_gpt":0.31776770120257286,"score_spread":0.2865499976609484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977088559","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9808496,0.000024299528,0.005393765,0.0013822308,0.0001862803,0.00008406432,0.0000011808226,0.0000043722152,0.012074204],"genre_scores_gemma":[0.9851245,0.0000027966657,0.0145340245,0.00019743104,0.000078183766,0.0000017589317,2.9364267e-7,0.0000025841912,0.00005841779],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99927884,0.000018158566,0.0002505654,0.00007452969,0.00026572717,0.00011216923],"domain_scores_gemma":[0.9993219,0.00007680508,0.0001768522,0.00009654558,0.00021889697,0.000109013665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029511878,0.000054845383,0.00019816945,0.00019901838,0.00011043567,0.000010557254,0.00008104469,0.000019141231,0.00003867165],"category_scores_gemma":[0.00014434349,0.000034643515,0.000074681375,0.0002906035,0.00015519165,0.00008455687,0.00001381194,0.000058919013,0.000014053127],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011653301,0.0008326699,0.90418345,0.00005576191,0.0002345417,0.000077721306,0.0007565552,0.0011345091,0.004806784,0.033198774,0.004069861,0.050532855],"study_design_scores_gemma":[0.00080092915,0.002334221,0.9824681,0.00017287064,0.00012514957,0.0027184938,0.00012327642,0.00091368065,0.0066372575,0.002809969,0.00083448103,0.000061529696],"about_ca_topic_score_codex":0.000025812798,"about_ca_topic_score_gemma":0.000007297897,"teacher_disagreement_score":0.07828471,"about_ca_system_score_codex":0.00002805692,"about_ca_system_score_gemma":0.00011141407,"threshold_uncertainty_score":0.14127216},"labels":[],"label_agreement":null},{"id":"W1980527645","doi":"10.1016/s1286-4579(00)01330-7","title":"Recent developments in amoebiasis:the Gal/GalNAc lectins of and","year":2000,"lang":"en","type":"review","venue":"Microbes and Infection","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Entamoeba histolytica; Amoebiasis; Biology; Mucin; Lectin; Dispar; Microbiology; Entamoeba; Protozoa; Immunology; Virology; Biochemistry","score_opus":0.038652909985392205,"score_gpt":0.3282787356911182,"score_spread":0.289625825705726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980527645","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015493386,0.9803843,0.0000033583956,0.000021143605,0.00012161643,0.0007210746,0.0000088975785,0.000016744894,0.0032294954],"genre_scores_gemma":[0.0012518305,0.99799556,0.00004923762,0.000028123972,0.000044150274,0.000058840928,0.000054259992,0.00002177075,0.0004962496],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990572,0.00006839076,0.00040620402,0.00024451964,0.00006626325,0.00015743251],"domain_scores_gemma":[0.9995915,0.000041547293,0.00014645925,0.00013949949,0.000037708443,0.000043244694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014500548,0.00022958616,0.0007129109,0.00025460453,0.00010797841,0.000017271723,0.00002013501,0.00018960812,0.00009083736],"category_scores_gemma":[0.00002111689,0.00014627901,0.000098798395,0.0003576329,0.00007021696,0.000046637582,0.000031935222,0.00024124073,0.000013230848],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000091206775,0.00014282484,0.0051702694,0.0017209247,0.00013800574,0.0000036803124,0.00006176607,1.214325e-7,0.000002344873,0.000008715755,0.00016974306,0.9925725],"study_design_scores_gemma":[0.00047133933,0.00014392899,0.009075631,0.004152064,0.00050390535,0.00044564353,0.0000062855734,0.0000010437999,0.000016964079,0.0000075876897,0.9850571,0.000118505675],"about_ca_topic_score_codex":0.0005064522,"about_ca_topic_score_gemma":0.0001982333,"teacher_disagreement_score":0.992454,"about_ca_system_score_codex":0.00013813114,"about_ca_system_score_gemma":0.00011795825,"threshold_uncertainty_score":0.5965085},"labels":[],"label_agreement":null},{"id":"W1981875981","doi":"10.1016/s0264-410x(02)00303-1","title":"Construction and immunogenicity of a codon-optimized Entamoeba histolytica Gal-lectin-based DNA vaccine","year":2002,"lang":"en","type":"article","venue":"Vaccine","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Entamoeba histolytica; Immunogenicity; Lectin; DNA vaccination; Biology; Virology; Recombinant DNA; Immune system; Protein subunit; Microbiology; Antibody; C-type lectin; Molecular biology; Immunology; Gene; Immunization; Biochemistry","score_opus":0.011406729372015693,"score_gpt":0.2295834723910919,"score_spread":0.2181767430190762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981875981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928841,0.0009893512,0.001243756,0.0008773658,0.0002596243,0.00050670415,0.000012751585,0.00009885292,0.0031275032],"genre_scores_gemma":[0.99302,0.0001912967,0.0053340667,0.0001297459,0.00006694288,0.000021540456,0.000026766225,0.00002478301,0.0011848323],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99891645,0.000038970473,0.00040172398,0.00026849372,0.00015426049,0.00022010771],"domain_scores_gemma":[0.99912935,0.00009220875,0.00017358459,0.00033606758,0.00014880828,0.0001199503],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010154531,0.00019984884,0.00048605455,0.00021088234,0.00011978092,0.000008112932,0.000039555856,0.00010266924,0.0024324318],"category_scores_gemma":[0.00009867551,0.00016613549,0.00012653487,0.0003106222,0.000025180212,0.000056595196,0.000024284642,0.00014524646,0.00003474955],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007205307,0.005664479,0.7925021,0.0006851599,0.002487955,0.00024688468,0.0005734161,0.00011390104,0.118929975,0.0007640176,0.013150841,0.057675947],"study_design_scores_gemma":[0.19401866,0.00967756,0.43049136,0.0010099029,0.0063523864,0.0052782283,0.000450591,0.035940714,0.2825014,0.00041496937,0.03207958,0.0017846351],"about_ca_topic_score_codex":0.00020435479,"about_ca_topic_score_gemma":0.000014946139,"teacher_disagreement_score":0.36201075,"about_ca_system_score_codex":0.00013363358,"about_ca_system_score_gemma":0.00003646181,"threshold_uncertainty_score":0.9984795},"labels":[],"label_agreement":null},{"id":"W1982405577","doi":"10.1073/pnas.1835863100","title":"Identification and characterization of a cyclooxygenase-like enzyme from <i>Entamoeba histolytica</i>","year":2003,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Entamoeba histolytica; Arachidonic acid; Enzyme; Biology; Cyclooxygenase; Biochemistry; Immune system; Prostaglandin; Microbiology; Molecular biology; Immunology","score_opus":0.023487734347992287,"score_gpt":0.2789947284614995,"score_spread":0.2555069941135072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982405577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970354,0.000069600115,0.000006608857,0.0005888612,0.000023089375,0.00017234577,0.00002427292,0.0000053811596,0.002074448],"genre_scores_gemma":[0.9990912,0.000045326593,0.00043270693,0.00011424922,0.000019419856,0.0000074544696,9.700217e-7,0.000002754299,0.00028593076],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902683,0.000004594273,0.00027068012,0.00015057926,0.0004822159,0.00006510077],"domain_scores_gemma":[0.9993472,0.00003630629,0.00037270033,0.000008252062,0.00020979556,0.000025733365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036642826,0.000058720056,0.00012740052,0.00010670948,0.0000955123,0.000006992686,0.00008905894,0.00004892109,0.000018471897],"category_scores_gemma":[0.00018254312,0.00003985225,0.000041127212,0.00036255416,0.0003926539,0.0002183591,0.000020866393,0.000055237513,9.365855e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012603741,0.00010581023,0.038619377,0.000035622506,0.000025957905,4.5977413e-9,0.00011759001,8.462811e-7,0.94453454,0.016293246,0.000067341694,0.00018705275],"study_design_scores_gemma":[0.0003234415,0.000041691084,0.37277165,0.00007076486,0.00005639403,0.000010601537,0.00006698014,0.00022949271,0.62067187,0.0054355874,0.0002848966,0.000036612233],"about_ca_topic_score_codex":0.000009873516,"about_ca_topic_score_gemma":3.7196063e-8,"teacher_disagreement_score":0.33415228,"about_ca_system_score_codex":0.000031349107,"about_ca_system_score_gemma":0.000029202125,"threshold_uncertainty_score":0.16251275},"labels":[],"label_agreement":null},{"id":"W1985564612","doi":"10.4155/fmc.09.59","title":"Current and Future Perspectives on the Chemotherapy of the Parasitic Protozoa<i>Trichomonas Vaginalis</i>and<i>Entamoeba Histolytica</i>","year":2009,"lang":"en","type":"review","venue":"Future Medicinal Chemistry","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Trichomonas vaginalis; Entamoeba histolytica; Protozoa; Trichomoniasis; Metronidazole; Biology; Trichomonas; Entamoeba; Microbiology; Pathogen; Antiprotozoal; Human pathogen; Protozoan parasite; Antibiotics; Medicine; Parasite hosting; Bacteria; Genetics; Gynecology","score_opus":0.013883189901850205,"score_gpt":0.3051080731378833,"score_spread":0.29122488323603307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985564612","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00078124204,0.9890011,0.00000196093,0.004253078,0.00036222584,0.0019081385,0.000032971486,0.000031350995,0.003627918],"genre_scores_gemma":[0.0010995768,0.99332047,0.000020403511,0.0002803763,0.0044154157,0.00022876123,0.000038581387,0.000046647303,0.0005497686],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99803895,0.000091354486,0.00046651406,0.0005694449,0.0005302299,0.00030349565],"domain_scores_gemma":[0.9983673,0.0001763153,0.00041505785,0.00074243033,0.00012060122,0.00017826016],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00022241483,0.0006214987,0.0013371599,0.00005586757,0.00023033548,0.000017835073,0.00022140655,0.00034426193,0.00017171381],"category_scores_gemma":[0.00007530792,0.00027976636,0.0004092972,0.00036795516,0.00046878276,0.00002404333,0.000036343907,0.0013385854,0.0000033044726],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010787286,0.00074525893,0.00030655166,0.0141560435,0.0006256072,0.000046402216,0.0009501134,1.0069553e-8,0.000018662076,0.00054726086,0.0061768633,0.9763194],"study_design_scores_gemma":[0.0009174485,0.00022892046,0.00048608548,0.008667185,0.0022483147,0.0010509123,0.00074118975,5.4392314e-7,0.00008509003,0.00005182978,0.98529077,0.00023168612],"about_ca_topic_score_codex":0.0000068527816,"about_ca_topic_score_gemma":4.3342044e-7,"teacher_disagreement_score":0.97911394,"about_ca_system_score_codex":0.00028524813,"about_ca_system_score_gemma":0.00034757587,"threshold_uncertainty_score":0.9999654},"labels":[],"label_agreement":null},{"id":"W1987488025","doi":"10.1016/j.ejrad.2006.11.022","title":"Portal and hepatic vein thrombosis in liver abscess: CT findings","year":2006,"lang":"en","type":"article","venue":"European Journal of Radiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Mount Sinai Hospital","funders":"","keywords":"Medicine; Portal vein thrombosis; Thrombosis; Radiology; Lumen (anatomy); Liver abscess; Abscess; Venous thrombosis; Surgery","score_opus":0.012035795524824153,"score_gpt":0.2428121795604668,"score_spread":0.23077638403564266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987488025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9831103,0.00067630515,0.000095494426,0.0001660816,0.0001240081,0.000047054484,9.5021807e-7,0.0000050957005,0.015774677],"genre_scores_gemma":[0.99875283,0.0002367444,0.00055482076,0.00008879974,0.00016228463,2.7950466e-7,0.000002454215,0.000011780858,0.00018998855],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99931645,0.00013646118,0.0002902052,0.00007965566,0.000057410267,0.0001198285],"domain_scores_gemma":[0.9996997,0.000040716088,0.00011489476,0.0000614361,0.00003480156,0.00004845243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003111298,0.000075751894,0.00023593096,0.00016158591,0.00003082682,0.000006246737,0.000033672575,0.00001279269,0.0001258574],"category_scores_gemma":[0.000040733375,0.000055300265,0.000052528085,0.000073769996,0.000074799565,0.000057277684,0.000012627984,0.00016169537,0.000024312862],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005501822,0.00020155119,0.9837177,0.000015796346,0.00010152036,0.0093666585,0.00017083225,0.000012652077,0.00078072073,0.00023277836,0.003305579,0.0020391895],"study_design_scores_gemma":[0.001838613,0.00067203806,0.9807181,0.00005932737,0.00007397267,0.014931829,0.000036820657,0.000025102645,0.00006807954,0.000051931343,0.0014770736,0.000047133013],"about_ca_topic_score_codex":0.000038762948,"about_ca_topic_score_gemma":0.000009814307,"teacher_disagreement_score":0.015642513,"about_ca_system_score_codex":0.000032704498,"about_ca_system_score_gemma":0.00002309885,"threshold_uncertainty_score":0.22550793},"labels":[],"label_agreement":null},{"id":"W1988385488","doi":"10.1016/j.micinf.2014.12.012","title":"Suppression of ERK activation in urethral epithelial cells infected with Neisseria gonorrhoeae and its isogenic minD mutant contributes to anti-apoptosis","year":2014,"lang":"en","type":"article","venue":"Microbes and Infection","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Saskatchewan Health Research Foundation; University of Saskatchewan","keywords":"Neisseria gonorrhoeae; MAPK/ERK pathway; Apoptosis; Biology; Mutant; Kinase; Cell culture; Microbiology; Phosphorylation; Cell biology; Gene; Genetics","score_opus":0.005207042243513527,"score_gpt":0.22756942427924673,"score_spread":0.2223623820357332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988385488","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99807924,0.000043943306,0.0010223552,0.00010739258,0.0001133787,0.0004960443,0.000011140356,0.000016760789,0.00010974678],"genre_scores_gemma":[0.99958813,0.00010473155,0.00011667839,0.000050370574,0.000038755665,0.00001866862,0.000029269844,0.00001387747,0.00003950844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993037,0.00004841013,0.00021842918,0.0002287935,0.00003599816,0.00016464423],"domain_scores_gemma":[0.99959135,0.000046737143,0.000091248876,0.00009921583,0.0001065861,0.000064857864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011249304,0.00015250681,0.0002885026,0.00024216202,0.00008852522,0.000020475602,0.000013239765,0.00011557438,0.000034084544],"category_scores_gemma":[0.00004616567,0.00011463234,0.00003216832,0.0002861721,0.000034930836,0.00013479983,0.000025409023,0.00010142096,0.0000052124624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022139035,0.00018602464,0.1769731,0.000057785455,0.000051547355,1.6455027e-7,0.00013843073,0.000030407677,0.81902224,0.00003632939,0.000016208867,0.003266367],"study_design_scores_gemma":[0.002036489,0.00075524126,0.35810012,0.00019255813,0.00008056442,0.000015769918,0.000016802702,0.00023190449,0.63772464,0.000015752854,0.0007465802,0.00008360689],"about_ca_topic_score_codex":0.0005665154,"about_ca_topic_score_gemma":0.0000987353,"teacher_disagreement_score":0.18129762,"about_ca_system_score_codex":0.000053344505,"about_ca_system_score_gemma":0.00002465864,"threshold_uncertainty_score":0.46745712},"labels":[],"label_agreement":null},{"id":"W1991078372","doi":"10.1007/s150100070006","title":"Epidemiology of Enterococcal Bacteremia in a Referral Center for Hepatobiliary Diseases","year":2000,"lang":"en","type":"article","venue":"Infection","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Saint-Luc; Centre Hospitalier de l’Université de Montréal; Université de Montréal; Centre Hospitalier Universitaire de Sherbrooke","funders":"","keywords":"Bacteremia; Medicine; Internal medicine; Hepatology; Septic shock; Risk factor; Epidemiology; Enterococcus faecium; Intensive care medicine; Surgery; Sepsis; Antibiotics","score_opus":0.03844170745230394,"score_gpt":0.34751666041344703,"score_spread":0.30907495296114307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991078372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99695456,0.0000383241,0.00025234415,0.000077581055,0.00013931969,0.00040755922,0.00002845005,0.000030650514,0.0020712372],"genre_scores_gemma":[0.9990696,0.000075037526,0.00012523137,0.000115802286,0.00008612123,0.00011161554,0.00012355628,0.00000890067,0.00028418127],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99935895,0.00005407643,0.00025541717,0.0001496106,0.0000316685,0.00015029455],"domain_scores_gemma":[0.99966395,0.00009107204,0.000045785397,0.00011905615,0.000031065185,0.00004909195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008906518,0.00008109028,0.00023744593,0.00009884636,0.000026262122,6.713746e-7,0.00001219962,0.000079045094,0.0004703816],"category_scores_gemma":[0.00007689596,0.00006615793,0.00012237485,0.00008299951,0.000035673092,0.00006219635,0.000005447763,0.000068152265,0.000025777445],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036484943,0.0006080605,0.9772679,0.000047488127,0.000031222706,0.0000025900201,0.000025207944,0.0000121975245,0.00004129139,0.000047319594,0.00014284224,0.02140901],"study_design_scores_gemma":[0.002113599,0.0004773968,0.9933719,0.00007952811,0.000047590926,0.000045479825,0.0000030252706,0.0002671735,0.00010539929,0.00039327858,0.0030499124,0.000045715038],"about_ca_topic_score_codex":0.0005202566,"about_ca_topic_score_gemma":0.000121268386,"teacher_disagreement_score":0.021363296,"about_ca_system_score_codex":0.0001051868,"about_ca_system_score_gemma":0.00002134444,"threshold_uncertainty_score":0.51503485},"labels":[],"label_agreement":null},{"id":"W1991653634","doi":"10.1038/srep01129","title":"Novel TPR-containing subunit of TOM complex functions as cytosolic receptor for Entamoeba mitosomal transport","year":2013,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Japan Science and Technology Agency; Ministry of Health, Labour and Welfare; Ministry of Education, Culture, Sports, Science and Technology; Japan Society for the Promotion of Science; Dalhousie University; Japan Health Sciences Foundation","keywords":"Cytosol; Protein subunit; Receptor; Computational biology; Biology; Cell biology; Chemistry; Bioinformatics; Biochemistry; Gene; Enzyme","score_opus":0.03172569196121061,"score_gpt":0.2792425595568858,"score_spread":0.2475168675956752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991653634","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98539925,0.000022255932,0.0020872783,0.00019412237,0.0035428498,0.0013250804,0.000029875864,0.00008327326,0.0073160017],"genre_scores_gemma":[0.9769379,0.0000011348751,0.0033887215,0.000048076025,0.00014020556,0.00025248193,0.0006860615,0.00002669591,0.018518709],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99816746,0.000011080928,0.000577566,0.00054051034,0.00035840477,0.00034495955],"domain_scores_gemma":[0.99829334,0.000046595065,0.00029326344,0.00063561124,0.00052994915,0.00020121723],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032690418,0.00017783589,0.00035037444,0.00025003994,0.00040281177,0.000044599983,0.00005609862,0.00008988027,0.002516239],"category_scores_gemma":[0.000065422355,0.00015017945,0.00026243425,0.00042377587,0.00024470774,0.0001914393,0.000018734108,0.000094844036,0.0001303009],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015351493,0.0017000057,0.28109917,0.00015781945,0.0004865358,0.00006236161,0.001221839,0.00003482695,0.6870783,0.00023691724,0.023388337,0.004380392],"study_design_scores_gemma":[0.007457656,0.00282118,0.4995278,0.0004773918,0.001381638,0.004584417,0.0041517303,0.0007311407,0.122253075,0.0014011863,0.35420397,0.0010087739],"about_ca_topic_score_codex":0.0014655351,"about_ca_topic_score_gemma":0.00011653528,"teacher_disagreement_score":0.5648252,"about_ca_system_score_codex":0.00008454388,"about_ca_system_score_gemma":0.00026885374,"threshold_uncertainty_score":0.9983956},"labels":[],"label_agreement":null},{"id":"W1992264242","doi":"10.3201/eid1809.120122","title":"<i>Entamoeba bangladeshi</i>nov. sp., Bangladesh","year":2012,"lang":"en","type":"letter","venue":"Emerging infectious diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Centre for Disease Control; Interior Health","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Entamoeba; Microbiology; Entamoeba histolytica; Biology; Medicine","score_opus":0.011875054939639565,"score_gpt":0.26184531759863977,"score_spread":0.24997026265900021,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992264242","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.097125165,0.023912929,0.0008403235,0.506264,0.025547758,0.00762051,0.002438114,0.008800451,0.32745078],"genre_scores_gemma":[0.44398585,0.0003903418,0.000114437134,0.50376403,0.022858074,0.0007424433,0.0062563163,0.00057649903,0.021311998],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965066,0.00013938533,0.00058813696,0.00082045514,0.0007345936,0.0012108522],"domain_scores_gemma":[0.997798,0.00016501918,0.00033753927,0.0010389014,0.00021853374,0.00044197563],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000097408774,0.0009085452,0.0010149796,0.0006654353,0.0004934391,0.00010203831,0.00016870187,0.0008487784,0.0060533104],"category_scores_gemma":[0.00011733538,0.00081810215,0.0008982553,0.0005673959,0.00019875728,0.00026317348,0.00013304013,0.0017611535,0.0020625682],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017469492,0.0006203053,0.23573622,0.00042731638,0.0009428694,0.00092600094,0.00005194866,0.0000030935248,0.0000061175733,0.000035784502,0.7590263,0.002206613],"study_design_scores_gemma":[0.0019589297,0.0003040987,0.029541664,0.0003761935,0.0033679954,0.0005831193,0.000018869405,0.00001123649,0.000034587112,0.00019494019,0.9628288,0.00077954354],"about_ca_topic_score_codex":0.0003548564,"about_ca_topic_score_gemma":0.0000127477,"teacher_disagreement_score":0.34686068,"about_ca_system_score_codex":0.00063215004,"about_ca_system_score_gemma":0.00029070769,"threshold_uncertainty_score":0.99942696},"labels":[],"label_agreement":null},{"id":"W1993362378","doi":"10.1007/s15010-013-0408-0","title":"Community-acquired Klebsiella pneumoniae liver abscess: an emerging infection in Ireland and Europe","year":2013,"lang":"en","type":"review","venue":"Infection","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre","funders":"","keywords":"Klebsiella pneumoniae; Liver abscess; Medicine; Pyogenic liver abscess; Klebsiella infections; Klebsiella; Hepatic abscess; Abscess; Microbiology; Biology; Surgery","score_opus":0.07942758899990214,"score_gpt":0.3637924080983455,"score_spread":0.28436481909844336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993362378","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17011838,0.8156227,0.00011866553,0.000017054865,0.000803689,0.0022018503,0.000011307488,0.00032664379,0.010779725],"genre_scores_gemma":[0.014800115,0.9834705,0.00003050902,0.00002562445,0.00020229591,0.0002536,0.00026139195,0.00008922788,0.00086674537],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979366,0.000651719,0.00056841533,0.00038115217,0.00015840995,0.00030372248],"domain_scores_gemma":[0.99882627,0.00009990187,0.00030385182,0.00048776015,0.00012815993,0.00015408131],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038324468,0.00047650226,0.0010869243,0.0007504996,0.00036342195,0.00009297947,0.00004887678,0.00043728156,0.00020119286],"category_scores_gemma":[0.000083805986,0.00039465603,0.00018443874,0.0007375174,0.00008841191,0.00039680576,0.00008731135,0.0008109872,0.00036579362],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010389892,0.000717142,0.031910073,0.00621802,0.00023898731,0.000056684064,0.00020913643,0.0000037099412,0.000007670486,0.000030537285,0.000100429475,0.9604972],"study_design_scores_gemma":[0.0010215214,0.0007323033,0.044416264,0.0072247954,0.0012375613,0.0012683538,0.0000126394925,0.000113099515,0.0000033487745,0.0000312155,0.9434759,0.00046298938],"about_ca_topic_score_codex":0.013376585,"about_ca_topic_score_gemma":0.0014364027,"teacher_disagreement_score":0.96003425,"about_ca_system_score_codex":0.0003163673,"about_ca_system_score_gemma":0.000103546365,"threshold_uncertainty_score":0.9998505},"labels":[],"label_agreement":null},{"id":"W1997067191","doi":"10.1002/1521-4141(200002)30:2<423::aid-immu423>3.0.co;2-0","title":"A subunit vaccine candidate region of theEntamoeba histolytica galactose-adherence lectin promotes interleukin-12 gene transcription and protein production in human macrophages","year":2000,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Medical Research Council Canada; McGill University","keywords":"Biology; Entamoeba histolytica; Lectin; Molecular biology; Protein subunit; Immune system; Mannan-binding lectin; Microbiology; Gene; Immunology; Biochemistry","score_opus":0.015792827702883247,"score_gpt":0.24145497103066252,"score_spread":0.22566214332777929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997067191","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967001,0.001085768,0.00005715927,0.00041467717,0.00011909765,0.0003339599,7.653689e-7,0.000012094468,0.001276343],"genre_scores_gemma":[0.99742824,0.00045015806,0.00024161088,0.000014307838,0.000066514,0.0000035008165,0.000004651846,0.000022729655,0.0017683085],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986751,0.00036323088,0.0005518234,0.00015939883,0.000089238994,0.00016119998],"domain_scores_gemma":[0.99936837,0.000008341373,0.00030238734,0.00016741085,0.00011205726,0.000041406278],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035408113,0.0001386523,0.00032291937,0.00028865537,0.00006852994,0.000008167579,0.00007030996,0.000035971887,0.00016833004],"category_scores_gemma":[0.00004336125,0.00010845749,0.00006447754,0.000149855,0.000103752616,0.0001256336,0.00001214952,0.00031834884,0.000006463902],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019419715,0.0006980793,0.012310975,0.00006085525,0.00023536384,0.0008515988,0.001596841,0.0000031639852,0.9113962,0.000017008106,0.000060256487,0.0708277],"study_design_scores_gemma":[0.01029049,0.013803944,0.55427396,0.0011084793,0.00032300578,0.011933404,0.0003163168,0.000010238819,0.40589422,0.00017985485,0.0016205164,0.00024554602],"about_ca_topic_score_codex":0.0001107883,"about_ca_topic_score_gemma":0.00003204516,"teacher_disagreement_score":0.541963,"about_ca_system_score_codex":0.00010612188,"about_ca_system_score_gemma":0.00004248068,"threshold_uncertainty_score":0.4422768},"labels":[],"label_agreement":null},{"id":"W2002066745","doi":"10.1016/j.ajpath.2011.05.001","title":"Prostaglandin E2 Produced by Entamoeba histolytica Signals via EP4 Receptor and Alters Claudin-4 to Increase Ion Permeability of Tight Junctions","year":2011,"lang":"en","type":"article","venue":"American Journal Of Pathology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Weizmann Institute of Science; Crohn's and Colitis Foundation of Canada","keywords":"Entamoeba histolytica; Tight junction; Prostaglandin E2; Claudin; Cell biology; Biology; Cryptosporidium parvum; Immunology; Microbiology; Endocrinology","score_opus":0.01294999157138963,"score_gpt":0.25772742066350013,"score_spread":0.2447774290921105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002066745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967658,0.0000973747,0.0012813027,0.0009590281,0.00021037465,0.0002914044,0.000021130534,0.0000097991815,0.0003637834],"genre_scores_gemma":[0.99643695,0.000046755842,0.0029163016,0.00021586793,0.00007091064,0.000011950803,0.000007165733,0.000014978409,0.00027913455],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99889976,0.00017939978,0.00038229043,0.00021102592,0.0001358667,0.00019166821],"domain_scores_gemma":[0.99881005,0.000051024384,0.0004348689,0.00020509165,0.00023945449,0.00025947895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033331467,0.00013802225,0.0005046188,0.00021095059,0.000068462046,0.0000037855143,0.000053274787,0.000045190718,0.00023851907],"category_scores_gemma":[0.00021741638,0.00010255967,0.00009792526,0.00021218917,0.00044123616,0.00007632585,0.000027372005,0.00017655498,0.0000092185],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026095486,0.0022453435,0.3891205,0.000055308312,0.00040022642,0.00034242676,0.0030199036,6.698694e-7,0.5570844,0.00008854657,0.0061470713,0.0388861],"study_design_scores_gemma":[0.0124115385,0.09083293,0.550176,0.0004634833,0.0029606814,0.02044072,0.003893797,0.000036060235,0.2883832,0.00066866964,0.028641572,0.0010913592],"about_ca_topic_score_codex":0.00014576917,"about_ca_topic_score_gemma":0.0000042894426,"teacher_disagreement_score":0.26870117,"about_ca_system_score_codex":0.0001388412,"about_ca_system_score_gemma":0.000090763446,"threshold_uncertainty_score":0.4182262},"labels":[],"label_agreement":null},{"id":"W2003594736","doi":"10.1016/s0188-4409(00)00155-7","title":"Immunogenicity of an Optimized Entamoeba histolytica Gal-Lectin DNA Vaccine","year":2000,"lang":"en","type":"article","venue":"Archives of Medical Research","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Entamoeba histolytica; Immunogenicity; DNA vaccination; Virology; Microbiology; Lectin; Entamoeba; Biology; Immunology; Immune system; Immunization","score_opus":0.0353044222582048,"score_gpt":0.39984030841460905,"score_spread":0.36453588615640425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003594736","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9473442,0.00037840367,0.0001635706,0.0015714982,0.00004769832,0.0004187018,0.000008833275,0.000027252312,0.050039873],"genre_scores_gemma":[0.9914991,0.001178475,0.0027229865,0.000044639834,0.000092145114,0.000029406006,0.000040340467,0.000022313458,0.0043705786],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9965488,0.0004028997,0.00050323416,0.00031003891,0.0017592025,0.0004758716],"domain_scores_gemma":[0.99763596,0.001080755,0.000057465702,0.00058584096,0.00011669356,0.0005232888],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012554354,0.00013444386,0.000493713,0.0003402122,0.00013366937,0.0000059512163,0.00033397606,0.00012677223,0.014289204],"category_scores_gemma":[0.0011821567,0.00010198261,0.00018444935,0.00039808667,0.0006096013,0.000055406636,0.00012180744,0.0006545475,0.00006335294],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010585784,0.008098746,0.010512414,0.0003566819,0.00087976066,0.00044727064,0.0017391583,0.000013516287,0.015465616,0.001423908,0.0018605985,0.94861656],"study_design_scores_gemma":[0.10811571,0.031788424,0.502689,0.004292369,0.0010521404,0.0020820939,0.0022781983,0.04534149,0.21242811,0.013623526,0.0749903,0.0013186068],"about_ca_topic_score_codex":0.0013935448,"about_ca_topic_score_gemma":0.00004036222,"teacher_disagreement_score":0.94729793,"about_ca_system_score_codex":0.000054759043,"about_ca_system_score_gemma":0.00054954033,"threshold_uncertainty_score":0.98661184},"labels":[],"label_agreement":null},{"id":"W2005528651","doi":"10.1139/o06-060","title":"Microbicidal action of lactoferrin and lactoferricin and their synergistic effect with metronidazole in <i>Entamoeba histolytica</i>This paper is one of a selection of papers published in this Special Issue, entitled 7th International Conference on Lactoferrin: Structure, Function, and Applications, and has undergone the Journal's usual peer review process.","year":2006,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Consejo Nacional de Ciencia y Tecnología; Morinaga Milk Industry","keywords":"Entamoeba histolytica; Lactoferrin; Metronidazole; Microbiology; Entamoeba; Amoebiasis; Biology; Antibiotics; Chemistry; Biochemistry","score_opus":0.010247249980543032,"score_gpt":0.24732965869103177,"score_spread":0.23708240871048875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005528651","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99299246,0.0024954227,0.000037380636,0.0004983672,0.00003210133,0.00031377925,0.000031311138,0.0000037096393,0.0035954865],"genre_scores_gemma":[0.99710035,0.0021629788,0.000021770908,0.00006402491,0.00008865945,0.000012951866,0.000066800385,0.000006263606,0.00047620037],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992707,0.000057509867,0.0002727463,0.00020788156,0.00009345358,0.00009772229],"domain_scores_gemma":[0.9994452,0.00008016399,0.00021200524,0.00008159667,0.00014586982,0.000035167723],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020931683,0.0001425896,0.0003187114,0.000089003974,0.000054132404,0.000011615709,0.00003076181,0.00011800003,0.0012509488],"category_scores_gemma":[0.000037062397,0.00009031501,0.000017335227,0.0001386787,0.0002815566,0.000049958555,0.000020508243,0.00019076858,1.16399754e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012965451,0.00045779409,0.1855056,0.001588264,0.0001975623,0.0000011479904,0.00016807152,0.0000014305435,0.80600584,0.00019413313,0.0006998417,0.0038837881],"study_design_scores_gemma":[0.0071480772,0.0018910647,0.11067167,0.0009474838,0.00064887083,0.00024000932,0.00056957995,0.00009393741,0.8702192,0.00045804217,0.0068162414,0.00029586346],"about_ca_topic_score_codex":0.00030849187,"about_ca_topic_score_gemma":0.00016613686,"teacher_disagreement_score":0.07483394,"about_ca_system_score_codex":0.000047750145,"about_ca_system_score_gemma":0.00006420962,"threshold_uncertainty_score":0.99966204},"labels":[],"label_agreement":null},{"id":"W2009191465","doi":"10.1038/ajg.2014.2","title":"Response to Hassan et al.","year":2014,"lang":"en","type":"letter","venue":"The American Journal of Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital; Queen's University","funders":"","keywords":"Medicine","score_opus":0.01389268497187732,"score_gpt":0.29759306781402817,"score_spread":0.2837003828421508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009191465","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2769355,0.000009568156,0.0021843796,0.7203378,0.00026814095,0.00011496041,0.0000061913506,0.000008532021,0.00013493083],"genre_scores_gemma":[0.18212545,0.000022120377,0.00092303386,0.8157568,0.00066332537,0.0000071937643,0.000006669087,0.0000392801,0.00045613587],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970921,0.0015461888,0.000469666,0.00017708089,0.00030879158,0.00040614154],"domain_scores_gemma":[0.99793977,0.0003599929,0.00089817884,0.00046449518,0.00020197337,0.00013559504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013037656,0.00024346341,0.0010133013,0.0003837029,0.00006169814,0.000014627737,0.00025401346,0.00006637982,0.000081202634],"category_scores_gemma":[0.00016779576,0.00014167216,0.0003288769,0.00012738084,0.00036748557,0.000024105182,0.00005989832,0.0016375498,0.000088357956],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.022411764,0.000066742425,0.0071353754,0.0000033264992,0.00062307727,0.0011933249,0.000078250676,0.000008575496,0.00010806166,7.118599e-7,0.96772516,0.00064561976],"study_design_scores_gemma":[0.0012121219,0.04261388,0.014465836,0.00009041244,0.00033488314,0.018357689,0.000038203,0.000002756898,0.000005674631,0.00001578598,0.922802,0.000060780632],"about_ca_topic_score_codex":0.00003296915,"about_ca_topic_score_gemma":0.000003927283,"teacher_disagreement_score":0.09541898,"about_ca_system_score_codex":0.00013203699,"about_ca_system_score_gemma":0.00011169397,"threshold_uncertainty_score":0.711443},"labels":[],"label_agreement":null},{"id":"W2010936509","doi":"10.1078/0344-0338-00047","title":"Intestinal Amebiasis: A Diagnosis not to be Missed","year":2001,"lang":"en","type":"article","venue":"Pathology - Research and Practice","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cégep de Rimouski; Montreal General Hospital; McGill University Health Centre","funders":"","keywords":"Entamoeba histolytica; Amoebiasis; Medicine; Colitis; Biopsy; Pathology; Intensive care medicine; Internal medicine; Immunology","score_opus":0.26866704384248813,"score_gpt":0.5005052892524606,"score_spread":0.2318382454099725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010936509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8595212,0.00019851977,0.00017582183,0.09916135,0.00007517877,0.00048006844,0.0000075198823,0.00004307066,0.04033725],"genre_scores_gemma":[0.98425084,0.0012449358,0.00503807,0.005325772,0.00013966097,0.00027404088,0.000010673314,0.000015683338,0.0037003167],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99838865,0.00044454527,0.00014092519,0.00032419356,0.00027802854,0.00042368117],"domain_scores_gemma":[0.99570715,0.0032207433,0.000033301494,0.00026712922,0.0004413544,0.0003303382],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.001549204,0.00009994345,0.00017386442,0.00024443844,0.0002869459,0.000036145073,0.000054321074,0.00008695077,0.00040286683],"category_scores_gemma":[0.013957842,0.00007257652,0.000028348553,0.00043669716,0.00018553989,0.00014768467,0.0000962857,0.0004714385,0.00032721157],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.018626137,0.009174646,0.59105164,0.00016973313,0.0006630109,0.059501644,0.006680188,0.0000018443558,0.013972887,0.0029657905,0.05492992,0.24226254],"study_design_scores_gemma":[0.0037276135,0.010645797,0.18050936,0.00013790715,0.00026941867,0.03783135,0.0049328273,0.000040542214,0.0034411272,0.00080109405,0.757381,0.00028195576],"about_ca_topic_score_codex":0.0003481109,"about_ca_topic_score_gemma":0.000045771583,"teacher_disagreement_score":0.7024511,"about_ca_system_score_codex":0.000059034246,"about_ca_system_score_gemma":0.000101548285,"threshold_uncertainty_score":0.994348},"labels":[],"label_agreement":null},{"id":"W2012829930","doi":"10.1074/jbc.m601988200","title":"Suppression of NF-κB Activation by Entamoeba histolytica in Intestinal Epithelial Cells Is Mediated by Heat Shock Protein 27","year":2006,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Hsp27; Cell biology; Biology; IκB kinase; Phosphorylation; MAPK/ERK pathway; NF-κB; Heat shock protein; Molecular biology; Intestinal epithelium; Kinase; IκBα; Gene silencing; Small interfering RNA; Entamoeba histolytica; Signal transduction; Cell culture; Hsp70; Epithelium; Immunology; Transfection; Biochemistry; Gene","score_opus":0.01082317788891065,"score_gpt":0.2448684267450043,"score_spread":0.23404524885609365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012829930","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99781054,0.00016314063,0.0002043442,0.0004222722,0.000043346456,0.00013975172,0.000042449567,0.000008505316,0.0011656315],"genre_scores_gemma":[0.9987441,0.00003170824,0.0003086667,0.000044782326,0.00010760628,0.0000046274517,0.000082632694,0.0000069539865,0.0006689353],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892247,0.000031265703,0.000542714,0.00014308756,0.00019596828,0.00016449978],"domain_scores_gemma":[0.99934083,0.00009018903,0.0002695671,0.00009288329,0.000116499825,0.00009001998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013585221,0.00014036158,0.00034266233,0.000036839803,0.000026560192,0.000004996309,0.00007053505,0.00021781803,0.0006186048],"category_scores_gemma":[0.00015607786,0.00008879986,0.00011287159,0.00011357021,0.000099560704,0.00004645434,0.000023228438,0.00032976456,0.0000043094783],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005555552,0.000954934,0.01726821,0.000037978578,0.000023365652,0.000027279772,0.000009715963,0.0000014414593,0.9719807,7.732401e-7,0.008939172,0.00020088645],"study_design_scores_gemma":[0.0021349047,0.0004842072,0.0016616277,0.00021148018,0.00002734037,0.0000957519,0.000025483941,0.000032595035,0.992835,0.00008285712,0.0023305113,0.00007826991],"about_ca_topic_score_codex":0.0000648518,"about_ca_topic_score_gemma":2.4034807e-7,"teacher_disagreement_score":0.020854285,"about_ca_system_score_codex":0.00021563565,"about_ca_system_score_gemma":0.00006336927,"threshold_uncertainty_score":0.6773289},"labels":[],"label_agreement":null},{"id":"W203202853","doi":"10.1155/2010/594712","title":"Fever and Abdominal Pain in a Returning Traveller","year":2010,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"LMC Diabetes & Endocrinology (Canada)","funders":"","keywords":"Chills; Medicine; Abdominal pain; Vomiting; Emergency department; Nausea; Malaise; Physical examination; Gastroenterology; Internal medicine; Microhematuria; Past medical history; Surgery; Proteinuria; Kidney","score_opus":0.003270966275869181,"score_gpt":0.21953964714963306,"score_spread":0.21626868087376389,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W203202853","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974102,0.00091480336,0.00006333185,0.0008667146,0.0003383216,0.00008026291,0.00001017014,0.0000033186936,0.00031288443],"genre_scores_gemma":[0.99867994,0.0001301159,0.000066691384,0.00089110463,0.00017017983,0.0000021888793,0.000005062051,0.0000071975405,0.000047525067],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99935067,0.00006131001,0.00022764463,0.000106603446,0.00003612165,0.00021763166],"domain_scores_gemma":[0.99874055,0.000099441015,0.00006754914,0.000054098582,0.00006348121,0.00097488327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032200094,0.000093956376,0.0002541428,0.0002532566,0.00008142866,0.000011012636,0.000027247954,0.00017004678,0.0006641863],"category_scores_gemma":[0.0007184053,0.000068896974,0.000055712164,0.00007787655,0.00030163556,0.00003112977,0.0000073659276,0.00044088732,0.0000021348349],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055186516,0.00008488738,0.9312754,0.000029986726,0.00008957154,0.0014090937,0.00017008155,1.4924159e-7,0.0019898862,0.00012769226,0.0008888302,0.06387921],"study_design_scores_gemma":[0.006500912,0.001475803,0.9087759,0.0003154193,0.00022630217,0.035920687,0.0002456885,0.000058095506,0.000054300515,0.0004373127,0.045787577,0.00020196053],"about_ca_topic_score_codex":0.002557518,"about_ca_topic_score_gemma":0.019840162,"teacher_disagreement_score":0.063677244,"about_ca_system_score_codex":0.000052379175,"about_ca_system_score_gemma":0.0008883888,"threshold_uncertainty_score":0.9980452},"labels":[],"label_agreement":null},{"id":"W2032854797","doi":"10.4161/gmic.22596","title":"Reprofiled drug targets ancient protozoans","year":2013,"lang":"en","type":"review","venue":"Gut Microbes","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Montreal General Hospital","funders":"National Institute of Allergy and Infectious Diseases; Michigan State University","keywords":"Auranofin; Entamoeba histolytica; Giardia lamblia; Biology; Antiparasitic; Microbiology; Drug; Nitazoxanide; Cryptosporidium parvum; Antiparasitic agent; Pharmacology; Drug repositioning; Thioredoxin reductase; Thioredoxin; Biochemistry; Medicine; Enzyme; Immunology","score_opus":0.036828749416887956,"score_gpt":0.3416056089571228,"score_spread":0.3047768595402348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032854797","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006008126,0.9841094,0.00001561942,0.000027833967,0.000398185,0.00609161,0.00006253394,0.00012834213,0.0091063995],"genre_scores_gemma":[0.000009432055,0.958835,0.0012547629,0.000075146454,0.0002658206,0.0024143169,0.00041825004,0.00007598215,0.036651272],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99829274,0.00007112881,0.00051920564,0.00057185756,0.00015092938,0.00039413178],"domain_scores_gemma":[0.9987123,0.000034239238,0.00024636998,0.0007380261,0.00012231858,0.00014677209],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001404304,0.00045335258,0.0014554949,0.00021447346,0.00013669753,0.00003452766,0.00011179121,0.00023025874,0.0016826522],"category_scores_gemma":[0.000046644633,0.00029298977,0.00060793327,0.000252483,0.000070512666,0.00005158884,0.00008970071,0.00034805495,0.005088419],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007022361,0.0005119182,0.00009970926,0.015475411,0.0006968542,0.00011808929,0.000075367076,1.9442517e-8,0.00003417139,0.000056367546,0.0864808,0.89644426],"study_design_scores_gemma":[0.00037812465,0.00010473049,0.000034235374,0.007809005,0.0011599098,0.00041611155,0.000009966818,4.475195e-7,0.00004607204,0.00000824103,0.9897906,0.00024253031],"about_ca_topic_score_codex":0.00012773217,"about_ca_topic_score_gemma":0.000004777451,"teacher_disagreement_score":0.9033098,"about_ca_system_score_codex":0.00027118018,"about_ca_system_score_gemma":0.00035951968,"threshold_uncertainty_score":0.9999522},"labels":[],"label_agreement":null},{"id":"W2033457723","doi":"10.4161/hv.27796","title":"The future for vaccine development against<i>Entamoeba histolytica</i>","year":2014,"lang":"en","type":"review","venue":"Human Vaccines & Immunotherapeutics","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Bible College; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Entamoeba histolytica; Biology; Microbiology; Immunology; Liver abscess; Amoebiasis; Virology; Abscess","score_opus":0.037873825658677654,"score_gpt":0.356250264909805,"score_spread":0.31837643925112735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033457723","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000033510336,0.9939073,0.00032936363,0.00018917507,0.0013427875,0.003012648,0.000017035347,0.00017057643,0.0009976586],"genre_scores_gemma":[0.000037983078,0.9819146,0.0007714084,0.00062118855,0.0016280835,0.00096993253,0.0006769553,0.00028338312,0.013096472],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99690884,0.00010501789,0.0013857275,0.00059662125,0.0002942273,0.00070956594],"domain_scores_gemma":[0.9972415,0.00032888318,0.0007071609,0.0013080983,0.0002823977,0.00013197362],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.00042993316,0.0009324983,0.0021631455,0.00022331443,0.0014783419,0.00011110241,0.0004352856,0.00049633085,0.000092498674],"category_scores_gemma":[0.000018983083,0.0005492109,0.0010530007,0.00028570765,0.000042208358,0.000047822617,0.000094304174,0.0005603525,0.00018038205],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006017625,0.00025695155,0.000041877905,0.0040599406,0.0023530957,0.0000060476423,0.00006412585,1.0713058e-7,0.0000020091343,0.00083865057,0.0040129498,0.9883041],"study_design_scores_gemma":[0.002469621,0.0002953215,0.00008184745,0.0028376314,0.003203601,0.00012028797,0.000026581087,0.000004536663,0.0000056328745,0.00006207412,0.9903685,0.0005243688],"about_ca_topic_score_codex":0.00000428728,"about_ca_topic_score_gemma":0.00004452478,"teacher_disagreement_score":0.9877797,"about_ca_system_score_codex":0.00070070376,"about_ca_system_score_gemma":0.0005069083,"threshold_uncertainty_score":0.9998216},"labels":[],"label_agreement":null},{"id":"W2036649413","doi":"10.1093/cid/cir621","title":"Bowel \"Infarction\" in a Postpartum Patient","year":2011,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Bowel infarction; Infarction; Postpartum period; Pregnancy; General surgery; Surgery; Myocardial infarction; Internal medicine","score_opus":0.0486895401273979,"score_gpt":0.3423259811243795,"score_spread":0.2936364409969816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036649413","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96361077,0.00019103901,0.000035777495,0.000095250514,0.0006568895,0.00041320463,0.00001482081,0.00017568188,0.03480659],"genre_scores_gemma":[0.9982878,0.00017204304,0.000034597426,0.0010024322,0.0001318385,0.00009947765,0.00002390823,0.00001991687,0.00022799858],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987427,0.00008607947,0.0005015304,0.00030637757,0.00012217778,0.00024116435],"domain_scores_gemma":[0.9990936,0.0001168383,0.000095428026,0.00030373494,0.00009336508,0.00029706513],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000088695146,0.00014900386,0.00030714058,0.00014138735,0.00007915441,0.000009603876,0.000032802498,0.000110628636,0.0010529088],"category_scores_gemma":[0.0003969237,0.00012148019,0.0003406094,0.00022314348,0.00014648448,0.00009053912,0.00004103472,0.00020940379,0.00043606243],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012579055,0.004723967,0.9849535,0.000018404298,0.00014480807,0.00014223259,0.0000743474,0.0000011805379,0.0000011071925,0.00028447565,0.0008367712,0.008693375],"study_design_scores_gemma":[0.0020075338,0.0016376463,0.9928075,0.00006461836,0.00021303285,0.000037275575,0.000046292782,0.0000323404,0.000012025869,0.0013646845,0.001656885,0.00012017905],"about_ca_topic_score_codex":0.00022910284,"about_ca_topic_score_gemma":0.00006460595,"teacher_disagreement_score":0.034677044,"about_ca_system_score_codex":0.00009145377,"about_ca_system_score_gemma":0.0001176027,"threshold_uncertainty_score":0.9998603},"labels":[],"label_agreement":null},{"id":"W2037124756","doi":"10.1097/00006454-200009000-00022","title":"SURGICAL COMPLICATIONS OF SHIGELLOSIS IN CHILDREN","year":2000,"lang":"en","type":"review","venue":"The Pediatric Infectious Disease Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Medicine; Shigellosis; Shigella; Abdominal pain; Peritonitis; Perforation; Appendicitis; Bloody diarrhea; Surgery; Abdomen; Dysentery; Gastroenterology; Pathology","score_opus":0.018834694210061727,"score_gpt":0.31990948322780166,"score_spread":0.30107478901773993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037124756","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013491788,0.98084164,0.000006470428,0.000055305383,0.00013873473,0.0010525258,0.00010239427,0.000034168435,0.004276981],"genre_scores_gemma":[0.012935281,0.98554456,0.000008672652,0.000022377477,0.0011052917,0.00009268056,0.0000670135,0.000045469635,0.00017863669],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.997978,0.00027328636,0.0008941624,0.00023006313,0.00031428284,0.00031023208],"domain_scores_gemma":[0.9983671,0.0002456728,0.0005185533,0.0004570985,0.00009200815,0.00031960043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002763708,0.00034053816,0.0011198247,0.0006942913,0.0002614034,0.000030516838,0.00016971571,0.00016640637,0.00060227804],"category_scores_gemma":[0.000059308742,0.00020059175,0.0010106819,0.0009867253,0.000088961155,0.000052922638,0.00004211939,0.00092570484,0.00017755604],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004935164,0.0023565837,0.63835794,0.0017578332,0.0008945664,0.00018564431,0.000030175443,0.000026926351,1.6188672e-9,0.00009814649,0.0009886794,0.35525417],"study_design_scores_gemma":[0.0061520347,0.0006211452,0.25836498,0.0047969776,0.046328872,0.047845528,0.000009642534,0.00001776617,3.320168e-8,0.0012517087,0.63360643,0.0010048526],"about_ca_topic_score_codex":0.000057358367,"about_ca_topic_score_gemma":0.0000019565127,"teacher_disagreement_score":0.6326178,"about_ca_system_score_codex":0.00028234447,"about_ca_system_score_gemma":0.0009574303,"threshold_uncertainty_score":0.8179894},"labels":[],"label_agreement":null},{"id":"W2037965258","doi":"10.1016/s0272-5231(02)00008-4","title":"Lung radiology in the tropics","year":2002,"lang":"en","type":"review","venue":"Clinics in Chest Medicine","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; McMaster University Medical Centre","funders":"","keywords":"Medicine; Tropics; Melioidosis; Chest radiograph; Tuberculosis; Intensive care medicine; Disease; Radiography; Radiology; Pathology","score_opus":0.16211263895925465,"score_gpt":0.4667529605669806,"score_spread":0.304640321607726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037965258","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006114108,0.9831704,0.000016167058,0.0008511478,0.0009416484,0.0012551977,0.0000051344855,0.000022345075,0.013676803],"genre_scores_gemma":[0.00029710855,0.99599373,0.00009159712,0.00063947495,0.0013040842,0.00021458499,0.00016474658,0.00004433604,0.0012503137],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972627,0.00035284832,0.0013322724,0.0004482514,0.00023910578,0.00036481564],"domain_scores_gemma":[0.99708426,0.0016781797,0.00032561706,0.00078926055,0.00003773419,0.00008493871],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011278304,0.00040001958,0.0025188278,0.00045263852,0.00004572621,0.0000041880794,0.00024954393,0.0006450632,0.0003456451],"category_scores_gemma":[0.0010715512,0.00020743065,0.00028419404,0.0008323536,0.00030594112,0.000020607677,0.00003978095,0.0016509404,0.00009862098],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010254074,0.00051421515,0.006509026,0.0059593273,0.00016604533,0.001261857,0.00043292536,2.5987933e-7,4.873034e-9,0.00053353474,0.005413614,0.97919893],"study_design_scores_gemma":[0.002151046,0.00047984562,0.0010073785,0.012613848,0.0012263774,0.001072981,0.000081485734,0.000040617782,4.815514e-9,0.000121210054,0.9810584,0.00014678709],"about_ca_topic_score_codex":0.00004419916,"about_ca_topic_score_gemma":0.000033985456,"teacher_disagreement_score":0.9790521,"about_ca_system_score_codex":0.00035516082,"about_ca_system_score_gemma":0.00020048427,"threshold_uncertainty_score":0.84587765},"labels":[],"label_agreement":null},{"id":"W2040550331","doi":"10.1093/cid/ciu414","title":"Reply to Chironda et al","year":2014,"lang":"fr","type":"letter","venue":"Clinical Infectious Diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine","score_opus":0.04317781999412269,"score_gpt":0.3978570147593424,"score_spread":0.3546791947652197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040550331","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.048350245,0.0021783567,0.0022738627,0.85728735,0.02460684,0.002949247,0.00075029954,0.0009527845,0.06065101],"genre_scores_gemma":[0.08495817,0.0009220309,0.00006574132,0.88444847,0.012075004,0.00035508373,0.0010172358,0.00020580272,0.015952488],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9934636,0.0011487077,0.0018114172,0.0017345533,0.0006233065,0.0012184487],"domain_scores_gemma":[0.9928263,0.0029419335,0.0005368181,0.0017662677,0.00035077168,0.0015779273],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00078546064,0.0009857395,0.0019845867,0.00034097227,0.00042586247,0.00015526963,0.00026933049,0.0008908225,0.0046754405],"category_scores_gemma":[0.004535361,0.00086622074,0.0017298292,0.0004744862,0.0006733627,0.00014179561,0.000293317,0.0026014738,0.02022394],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006009093,0.0021218092,0.3529898,0.00015202626,0.0009512005,0.00076283223,0.000016854083,0.000026210655,5.1939185e-7,0.00023772684,0.63241607,0.010264876],"study_design_scores_gemma":[0.0027933503,0.0033362673,0.21957713,0.00079788774,0.0021049818,0.00014209487,0.000006289937,0.00004674976,0.0000013784991,0.0004471716,0.7701219,0.00062480127],"about_ca_topic_score_codex":0.00058787403,"about_ca_topic_score_gemma":0.00004077753,"teacher_disagreement_score":0.13770583,"about_ca_system_score_codex":0.0005232614,"about_ca_system_score_gemma":0.0007412364,"threshold_uncertainty_score":0.9996996},"labels":[],"label_agreement":null},{"id":"W2040889492","doi":"10.1073/pnas.0907106106","title":"Mitosomes in <i>Entamoeba histolytica</i> contain a sulfate activation pathway","year":2009,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":148,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Royal Holloway, University of London; Ministry of Health, Labour and Welfare; Ministry of Education, Culture, Sports, Science and Technology; Japan Health Sciences Foundation","keywords":"Entamoeba histolytica; Biology; Biochemistry; Organelle; Inorganic pyrophosphatase; Sulfate; Entamoeba; Mitochondrion; Western blot; Microbiology; Enzyme; Chemistry; Gene; Pyrophosphate","score_opus":0.03135291845086574,"score_gpt":0.3066633674708718,"score_spread":0.27531044902000607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040889492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9713361,0.000045254583,8.929382e-7,0.006826228,0.000010058179,0.00021858608,0.0000028681402,0.000008895253,0.02155108],"genre_scores_gemma":[0.99858946,0.00001351414,0.0004961875,0.00054170383,0.00003390667,0.0000065741647,2.0134209e-7,0.0000018928679,0.00031654033],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989237,0.0000032767055,0.00023791355,0.00014816511,0.00057599205,0.00011090832],"domain_scores_gemma":[0.9995672,0.000048520975,0.00020813168,0.0000058035334,0.00014481015,0.00002551329],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004319933,0.00006831485,0.00014261584,0.00019613608,0.00008857457,0.0000069388357,0.0001378023,0.000055311124,0.000010767751],"category_scores_gemma":[0.00027035965,0.000043254084,0.00005774878,0.0006375711,0.00024551313,0.00026454453,0.000020040436,0.00011103273,0.0000012567584],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001321106,0.00066546985,0.16907288,0.000063021624,0.000033095264,7.0186346e-8,0.00036307308,0.00002396535,0.70146114,0.12262628,0.00077181286,0.004787079],"study_design_scores_gemma":[0.0007639632,0.00018298948,0.60106057,0.00018362378,0.000014103289,0.000016328762,0.00013218082,0.00023247625,0.36852142,0.028549168,0.000288584,0.000054571523],"about_ca_topic_score_codex":0.000012667674,"about_ca_topic_score_gemma":8.022207e-8,"teacher_disagreement_score":0.4319877,"about_ca_system_score_codex":0.00010818533,"about_ca_system_score_gemma":0.000045971356,"threshold_uncertainty_score":0.17638503},"labels":[],"label_agreement":null},{"id":"W2041503042","doi":"10.1016/j.pt.2006.12.006","title":"Innate resistance to Entamoeba histolytica in murine models","year":2006,"lang":"en","type":"letter","venue":"Trends in Parasitology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Health Sciences Centre","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canadian Association of Gastroenterology","keywords":"Innate immune system; Entamoeba histolytica; Biology; Immunology; Disease; Immune system; Medicine; Pathology","score_opus":0.026241302626801848,"score_gpt":0.33684682125203286,"score_spread":0.310605518625231,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041503042","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08493618,0.0008714371,0.00022750495,0.5586057,0.0015946862,0.00078636984,0.00010979853,0.00019912401,0.3526692],"genre_scores_gemma":[0.54305583,0.000049121358,0.0026381752,0.21306926,0.0014245601,0.00061069976,0.0018799623,0.0001686497,0.23710373],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976325,0.0001068148,0.0006169816,0.0007197531,0.00022721732,0.0006967328],"domain_scores_gemma":[0.99903816,0.000089432295,0.00012357043,0.00063301646,0.00004424911,0.00007156345],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00008935024,0.00041504402,0.0009802022,0.0019771948,0.000038454993,0.0000075796156,0.00015036855,0.00088923104,0.00035981214],"category_scores_gemma":[0.00001624196,0.00039576853,0.00013364444,0.000865855,0.000119717835,0.00004766107,0.000054878645,0.001372512,0.00018215629],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001649614,0.00034231937,0.06739056,0.00008293864,0.00008952842,0.012536475,0.000093045164,0.000114648545,0.0000036623048,0.00031429037,0.9175119,0.0013556741],"study_design_scores_gemma":[0.0049554133,0.0003988042,0.15208475,0.0004772829,0.0002804308,0.00043598915,0.0000070704814,0.00017222983,0.000044409295,0.003002653,0.8374609,0.00068006595],"about_ca_topic_score_codex":0.0010365064,"about_ca_topic_score_gemma":0.0050577642,"teacher_disagreement_score":0.45811966,"about_ca_system_score_codex":0.00085047254,"about_ca_system_score_gemma":0.0000832511,"threshold_uncertainty_score":0.99984944},"labels":[],"label_agreement":null},{"id":"W2042128707","doi":"10.1590/0074-0276140196","title":"Community-acquired invasive liver abscess syndrome caused by a K1 serotype Klebsiella pneumoniae isolate in Brazil: a case report of hypervirulent ST23","year":2014,"lang":"en","type":"letter","venue":"Memórias do Instituto Oswaldo Cruz","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Ceftriaxone; Liver abscess; Lumbar puncture; Gastroenterology; Vomiting; Internal medicine; Necrotising fasciitis; Diabetes mellitus; Meningitis; Abscess; Nausea; Surgery; Cerebrospinal fluid; Antibiotics; Endocrinology; Microbiology","score_opus":0.033486452256728534,"score_gpt":0.28540459915530886,"score_spread":0.25191814689858033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042128707","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9650067,0.00067801005,0.0000661152,0.022574063,0.0011618788,0.002675427,0.00034203337,0.00020583012,0.0072899247],"genre_scores_gemma":[0.93916297,0.00027717595,0.00017977445,0.052030656,0.00046756674,0.00042062148,0.0013655373,0.00023888855,0.005856812],"study_design_codex":"case_report","study_design_gemma":"not_applicable","domain_scores_codex":[0.9950116,0.0006689467,0.0016753847,0.00095780287,0.0007838335,0.00090239913],"domain_scores_gemma":[0.99546057,0.00038288112,0.0010487187,0.0024375897,0.00040130503,0.000268956],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00075613573,0.0010578209,0.0022282,0.00084405113,0.00044871029,0.000098291675,0.00047447497,0.001553402,0.00062813703],"category_scores_gemma":[0.00033915005,0.00096522766,0.00048346474,0.0007368722,0.0005061742,0.00027228688,0.00036113642,0.0027008578,0.0003519893],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022379679,0.0013686288,0.0050134864,0.0025035616,0.0015070842,0.7809294,0.0017457877,0.000048987207,0.00074643083,0.000019053743,0.2053561,0.0005377034],"study_design_scores_gemma":[0.011409289,0.0025255824,0.0038474635,0.004744041,0.0024783742,0.42645627,0.00039987412,0.00016615055,0.0010109888,0.00012394492,0.54477674,0.0020612923],"about_ca_topic_score_codex":0.01913654,"about_ca_topic_score_gemma":0.0027323682,"teacher_disagreement_score":0.3544731,"about_ca_system_score_codex":0.0007573333,"about_ca_system_score_gemma":0.00074813183,"threshold_uncertainty_score":0.9997428},"labels":[],"label_agreement":null},{"id":"W2042177064","doi":"10.1006/expr.2001.4672","title":"Entamoeba dispar: Molecular Characterization of the Galactose/N-Acetyl-d-galactosamine Lectin","year":2001,"lang":"en","type":"article","venue":"Experimental Parasitology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"","keywords":"Biology; Lectin; Dispar; Entamoeba; Microbiology; Galactosamine; Entamoeba histolytica; Galactose; Molecular biology; Biochemistry","score_opus":0.009292862877442925,"score_gpt":0.3073734152014987,"score_spread":0.2980805523240558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042177064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921448,0.00012801381,0.00037437672,0.00046505436,0.00057400815,0.00042907923,0.000004212429,0.00003977534,0.005840643],"genre_scores_gemma":[0.9984834,0.000019714342,0.000087991735,0.00025799323,0.00007334083,0.00005661875,0.00007113169,0.000022045622,0.00092774077],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99905056,0.000071342445,0.00025663702,0.00023193065,0.0001584862,0.00023103754],"domain_scores_gemma":[0.9994093,0.000017919525,0.00013410761,0.00033019244,0.000037721093,0.00007072919],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000035786343,0.00016932742,0.0002837233,0.00006685383,0.00010374172,0.0000063047764,0.00007922086,0.000105879284,0.00057557283],"category_scores_gemma":[0.000018118406,0.00012050217,0.00013890753,0.00023687987,0.0001504922,0.00006429535,0.000051741015,0.00011827668,0.000050510618],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012005404,0.00055441924,0.350466,0.0000047147105,0.00007343933,0.000028821243,0.00011767198,6.7635773e-7,0.6481205,0.00026895173,0.00004162682,0.0002030922],"study_design_scores_gemma":[0.0011579492,0.0003599756,0.38788325,0.00001628708,0.000046339836,0.0004496179,0.00006651872,0.000024946796,0.60860044,0.000009682217,0.0013101255,0.00007490657],"about_ca_topic_score_codex":0.000083712126,"about_ca_topic_score_gemma":0.0000063330635,"teacher_disagreement_score":0.039520115,"about_ca_system_score_codex":0.0000988026,"about_ca_system_score_gemma":0.00003833448,"threshold_uncertainty_score":0.6302119},"labels":[],"label_agreement":null},{"id":"W2042377320","doi":"10.1002/eji.200636476","title":"Activation of dendritic cells by the Gal‐lectin of <i>Entamoeba histolytica</i> drives Th1 responses <i>in vitro</i> and <i>in vivo</i>","year":2007,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Entamoeba histolytica; Biology; In vivo; Lectin; In vitro; Cell biology; Microbiology; Immunology; Biochemistry; Genetics","score_opus":0.008386381765986894,"score_gpt":0.2405027848098828,"score_spread":0.2321164030438959,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042377320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939229,0.0011191453,0.00031182473,0.0012770445,0.00015720469,0.0001247324,0.0000031784948,0.0000037006885,0.0030803056],"genre_scores_gemma":[0.9984512,0.00024219367,0.0003708957,0.00051615376,0.0000334693,4.9510555e-7,9.828236e-7,0.000017156064,0.0003675012],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984709,0.00042988916,0.0006761424,0.0001030483,0.00012906578,0.00019096727],"domain_scores_gemma":[0.9987958,0.0004742478,0.00042894148,0.00015972463,0.00011016567,0.000031111227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009910106,0.0001116853,0.00033300638,0.0002944242,0.00003727141,0.0000037056157,0.00009419116,0.000041512656,0.000022939605],"category_scores_gemma":[0.00017298806,0.00007885596,0.00007638134,0.00022705198,0.00027429566,0.00007326698,0.00003096257,0.000368452,0.000002150354],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023928243,0.00035076815,0.00710125,0.000017096467,0.00010356056,0.00028349395,0.00046878462,0.0000022546615,0.9855256,0.00001983498,0.00086832396,0.0028662258],"study_design_scores_gemma":[0.0038946082,0.0012311301,0.0553236,0.00018728379,0.00008328571,0.0011419296,0.0006694754,0.0000034151626,0.9318585,0.0000243638,0.0055092457,0.000073166804],"about_ca_topic_score_codex":0.00003351462,"about_ca_topic_score_gemma":0.000004500868,"teacher_disagreement_score":0.053667087,"about_ca_system_score_codex":0.000082397244,"about_ca_system_score_gemma":0.000057387486,"threshold_uncertainty_score":0.32156527},"labels":[],"label_agreement":null},{"id":"W2045704709","doi":"10.1074/jbc.m109.066035","title":"Entamoeba histolytica Cysteine Proteinase 5 Binds Integrin on Colonic Cells and Stimulates NFκB-mediated Pro-inflammatory Responses","year":2010,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"Canadian Institutes of Health Research; Canadian Association of Gastroenterology","keywords":"Entamoeba histolytica; Integrin; Pathogenesis; Biology; Cell biology; Inflammation; Receptor; Immunology; Microbiology; Biochemistry","score_opus":0.015689536619954703,"score_gpt":0.26689713637117374,"score_spread":0.25120759975121904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045704709","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980047,0.0001588654,0.0000031661957,0.00050360634,0.00011163612,0.00023266714,0.000014426876,0.000027296554,0.00094364164],"genre_scores_gemma":[0.9985927,0.0000732636,0.00031736158,0.00007343117,0.00022517082,0.000012427072,0.000009128801,0.000010945198,0.00068561384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99899185,0.00003701701,0.0004211378,0.0001840393,0.00016255022,0.00020339327],"domain_scores_gemma":[0.9988611,0.00026427535,0.00028293586,0.00016915984,0.00016610682,0.0002564682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030704448,0.00018806622,0.00037001303,0.00006348158,0.00007435593,0.000015129445,0.00007774095,0.00030455375,0.00038361183],"category_scores_gemma":[0.00075718074,0.00011018122,0.00012364196,0.0000899225,0.00024206465,0.00003531784,0.000038727172,0.0007864128,0.000020029835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021080174,0.0005620922,0.02409201,0.000062525934,0.000098962926,0.0006338224,0.000022788576,5.4287307e-7,0.9717073,0.000011766664,0.00021476486,0.00048544473],"study_design_scores_gemma":[0.0038478137,0.0043341317,0.02840467,0.00022941445,0.00012667016,0.001740621,0.00005892949,0.00006158229,0.95545006,0.00009323975,0.005456469,0.00019638673],"about_ca_topic_score_codex":0.000002578088,"about_ca_topic_score_gemma":4.2863013e-7,"teacher_disagreement_score":0.016257191,"about_ca_system_score_codex":0.00010608377,"about_ca_system_score_gemma":0.00015834063,"threshold_uncertainty_score":0.44930598},"labels":[],"label_agreement":null},{"id":"W2048163600","doi":"10.1177/8756479306297098","title":"Pyogenic Abscess in a Patient With Alcoholic Cirrhosis","year":2007,"lang":"en","type":"article","venue":"Journal of diagnostic medical sonography","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"British Columbia Institute of Technology","funders":"","keywords":"Medicine; Cirrhosis; Differential diagnosis; Alcoholic liver disease; Hepatocellular carcinoma; Radiology; Medical diagnosis; Abscess; Liver abscess; Hepatic abscess; Surgery; Internal medicine; Pathology","score_opus":0.0061958424267925475,"score_gpt":0.2711507436090605,"score_spread":0.26495490118226794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048163600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944858,0.0008976148,0.0015156986,0.00076751225,0.00022858102,0.00020430701,0.0000013266575,0.000011079341,0.001888088],"genre_scores_gemma":[0.9975891,0.00053709676,0.0009216503,0.0007370635,0.00018329413,0.000008620046,0.0000021744677,0.000015092527,0.0000059009467],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99800974,0.000034842004,0.000643034,0.00012805685,0.0008526784,0.00033167494],"domain_scores_gemma":[0.99772984,0.0011156907,0.0002635027,0.0001384209,0.00016369975,0.0005888659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063387793,0.0001446096,0.00039398624,0.0006338036,0.000047057852,0.000009907628,0.00008552113,0.00012877614,0.00038127592],"category_scores_gemma":[0.0013602253,0.00008968808,0.00021562095,0.0007872314,0.00013093336,0.00007147646,0.000017952074,0.0004535313,0.000011759912],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031416095,0.0017606277,0.92404604,0.00003203354,0.00036579493,0.009185487,0.00032486476,0.0000049479504,0.000009731796,0.00005469266,0.0005343822,0.063367225],"study_design_scores_gemma":[0.0066947704,0.0034222438,0.9769818,0.0013289878,0.00037452398,0.0061269095,0.00038545983,0.0000156945,0.0003036804,0.00016740133,0.0040377644,0.00016073094],"about_ca_topic_score_codex":0.000085905056,"about_ca_topic_score_gemma":0.00009814307,"teacher_disagreement_score":0.063206494,"about_ca_system_score_codex":0.00007985353,"about_ca_system_score_gemma":0.00020503733,"threshold_uncertainty_score":0.4174704},"labels":[],"label_agreement":null},{"id":"W2051019502","doi":"10.1080/00365540701266763","title":"Pyogenic liver abscess caused by hypermucoviscous Klebsiella pneumoniae","year":2007,"lang":"en","type":"article","venue":"Scandinavian Journal of Infectious Diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"National Taiwan University","keywords":"Klebsiella pneumoniae; Pyogenic liver abscess; Liver abscess; Klebsiella infections; Serotype; Hepatic abscess; Medicine; Microbiology; Klebsiella; Enterobacteriaceae; Abscess; Biology; Surgery; Escherichia coli; Gene","score_opus":0.0071211556579114585,"score_gpt":0.26221543971352085,"score_spread":0.2550942840556094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051019502","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98909765,0.0031773164,0.0009715816,0.00008136373,0.0005989576,0.00023566185,0.000040347124,0.00006383248,0.005733271],"genre_scores_gemma":[0.99794245,0.0004550737,0.00002356632,0.0002186892,0.0004127036,0.000004295096,0.000015370337,0.000041307663,0.0008865543],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99842525,0.000042742908,0.0005264677,0.00019577329,0.00039640634,0.000413364],"domain_scores_gemma":[0.9983681,0.000106638036,0.00037002942,0.00022712344,0.00033345827,0.000594655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020808949,0.0002496476,0.0004575278,0.0003650808,0.00022657015,0.00004709251,0.00009154293,0.00010162223,0.00042167315],"category_scores_gemma":[0.00010403332,0.00019533023,0.0003871101,0.00035618,0.00013735275,0.0001881256,0.000022377171,0.0002754908,0.00007602037],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027905483,0.0014511159,0.9781385,0.00006876526,0.00064488145,0.0025324195,0.0001353913,0.00001035622,0.002143876,0.00004216616,0.004466862,0.010086582],"study_design_scores_gemma":[0.009273362,0.0036019736,0.9645482,0.00052041386,0.0021918148,0.009854015,0.00030322117,0.0000201827,0.0029619085,0.0003545846,0.005864359,0.0005060213],"about_ca_topic_score_codex":0.00007834291,"about_ca_topic_score_gemma":0.000024744728,"teacher_disagreement_score":0.013590386,"about_ca_system_score_codex":0.00039940025,"about_ca_system_score_gemma":0.00019538942,"threshold_uncertainty_score":0.7965335},"labels":[],"label_agreement":null},{"id":"W2052471143","doi":"10.1016/j.exppara.2004.12.007","title":"Entamoeba histolytica: identification of a distinct β2 integrin-like molecule with a potential role in cellular adherence","year":2005,"lang":"en","type":"article","venue":"Experimental Parasitology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"","keywords":"Entamoeba histolytica; Biology; Integrin; CD18; Cell adhesion molecule; Gentamicin protection assay; Integrin alpha M; Intestinal epithelium; Microbiology; Molecular biology; Flow cytometry; Immunology; Epithelium; Metastasis; Cell; Biochemistry","score_opus":0.007339561310620006,"score_gpt":0.2925402219615815,"score_spread":0.2852006606509615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052471143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940845,0.00070860924,0.0007769497,0.00008348304,0.00013501497,0.0003524478,0.000004205026,0.00002681059,0.0038279821],"genre_scores_gemma":[0.99867296,0.00000433238,0.0005836407,0.000040487274,0.00004654931,0.00010144389,0.00004756507,0.000015527265,0.0004874737],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998983,0.00004280715,0.00033647753,0.0002864283,0.00014318559,0.00020808485],"domain_scores_gemma":[0.9995173,0.000012875232,0.00012404878,0.00024010996,0.000036441088,0.0000692156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000048317776,0.00015045167,0.00028205573,0.00012458472,0.000045564764,0.0000056082204,0.00006613194,0.00008285923,0.000299556],"category_scores_gemma":[0.0000074116465,0.00012617503,0.00006193041,0.00014203666,0.00017495973,0.000072700765,0.000029606721,0.00012403376,0.00009687073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008548854,0.003241426,0.16094555,0.00001946466,0.00013239983,0.00025684424,0.0010806227,0.000029792862,0.83124095,0.0007871471,0.00010470542,0.0013062288],"study_design_scores_gemma":[0.0036175384,0.0012879785,0.09096067,0.000043592743,0.00008962644,0.00044439913,0.0009952665,0.00094351306,0.90104485,0.0000365039,0.0003641772,0.00017192487],"about_ca_topic_score_codex":0.0003824088,"about_ca_topic_score_gemma":0.00008192916,"teacher_disagreement_score":0.06998489,"about_ca_system_score_codex":0.00022319905,"about_ca_system_score_gemma":0.000055497887,"threshold_uncertainty_score":0.51452684},"labels":[],"label_agreement":null},{"id":"W2052992264","doi":"10.1007/s10096-012-1614-x","title":"Pyrosequencing reveals the complex polymicrobial nature of invasive pyogenic infections: microbial constituents of empyema, liver abscess, and intracerebral abscess","year":2012,"lang":"en","type":"article","venue":"European Journal of Clinical Microbiology & Infectious Diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Pyrosequencing; Interquartile range; Fastidious organism; Medical microbiology; Brain abscess; Microbiological culture; Abscess; Liver abscess; Microbiology; Pyogenic liver abscess; Medicine; Pathology; Biology; Internal medicine; Bacteria; Surgery","score_opus":0.031020091726616943,"score_gpt":0.32750563380048003,"score_spread":0.2964855420738631,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052992264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99314755,0.004030753,0.000046368314,0.00012991995,0.0013261742,0.00037270333,0.00018313414,0.000022631966,0.00074079004],"genre_scores_gemma":[0.99735016,0.0009024953,0.0001689161,0.0006170435,0.0008522066,0.0000019018348,0.000035191377,0.00003480251,0.000037294914],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99660873,0.0009121773,0.0017850768,0.00024167771,0.00009518138,0.00035712367],"domain_scores_gemma":[0.99601954,0.0010215981,0.0018006915,0.0003037229,0.0005734324,0.00028101276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010543796,0.00029073117,0.0010295494,0.0002243855,0.00021455967,0.000018444882,0.00018994334,0.00020269302,0.00020625694],"category_scores_gemma":[0.0015594262,0.00019337068,0.0006301796,0.00023405324,0.0016247681,0.00019749225,0.00016216657,0.00087541743,0.000029965415],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053942564,0.0020869763,0.8897204,0.00016002537,0.0015297285,0.00008124107,0.00019764426,0.0000062511513,0.10159768,0.00014283038,0.0023075833,0.0016302291],"study_design_scores_gemma":[0.0076338607,0.002047195,0.97131693,0.0006754468,0.002212183,0.007928473,0.00016450706,0.0000010548489,0.005500205,0.000059237653,0.0021855782,0.00027533455],"about_ca_topic_score_codex":0.0000320295,"about_ca_topic_score_gemma":0.000023342258,"teacher_disagreement_score":0.09609748,"about_ca_system_score_codex":0.00006580556,"about_ca_system_score_gemma":0.00033372617,"threshold_uncertainty_score":0.78854275},"labels":[],"label_agreement":null},{"id":"W2055867779","doi":"10.1016/s1542-3565(04)00459-8","title":"Population-based study of the epidemiology of and the risk factors for pyogenic liver abscess","year":2004,"lang":"en","type":"article","venue":"Clinical Gastroenterology and Hepatology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":331,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Calgary Laboratory Services","funders":"","keywords":"Medicine; Incidence (geometry); Relative risk; Pyogenic liver abscess; Population; Epidemiology; Liver transplantation; Confidence interval; Internal medicine; Transplantation; Risk factor; Surgery; Relative survival; Abscess; Pediatrics; Liver abscess; Cancer registry; Environmental health","score_opus":0.06348653367251897,"score_gpt":0.37684398759246185,"score_spread":0.31335745391994285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055867779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975597,0.000119896635,0.0006174465,0.0008307934,0.00016947159,0.00067660044,0.000014703989,0.000005721085,0.00000565654],"genre_scores_gemma":[0.9990927,0.00006678194,0.00018086558,0.0005833758,0.000022777098,0.000035593064,0.0000061570045,0.000005674071,0.000006101666],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99834883,0.0006353532,0.0006147259,0.0002089569,0.000031870935,0.00016027517],"domain_scores_gemma":[0.996885,0.002397109,0.00038576868,0.00022872069,0.00005837594,0.000045010092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006493824,0.000099192126,0.00072121766,0.000036767775,0.00011718303,4.6717332e-7,0.000060583963,0.00015029842,0.000008707405],"category_scores_gemma":[0.0009431415,0.00004774496,0.00017346824,0.000034471745,0.0007930831,0.000009599545,0.00004683546,0.0001980982,2.9306582e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002153066,0.00070279755,0.9958893,0.000017897386,0.00031966966,0.0000013199383,0.000094666015,0.000043456494,3.029785e-7,0.0006320065,0.000005032458,0.00014046625],"study_design_scores_gemma":[0.013151118,0.0034232214,0.9807226,0.000008683929,0.0006294238,0.000028851811,0.000100555706,0.0003742192,0.0000025402355,0.001533402,0.0000051785414,0.000020174111],"about_ca_topic_score_codex":0.0009318057,"about_ca_topic_score_gemma":0.0012900432,"teacher_disagreement_score":0.015166688,"about_ca_system_score_codex":0.0000101333235,"about_ca_system_score_gemma":0.000030891253,"threshold_uncertainty_score":0.29221478},"labels":[],"label_agreement":null},{"id":"W2056998319","doi":"10.1016/s0221-0363(05)81412-x","title":"Complications des gestes interventionnels percutanés sous contrôle radioscopique, échographique ou scanographique","year":2005,"lang":"fr","type":"review","venue":"Journal de Radiologie","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Medicine; Pneumothorax; Percutaneous; Surgery; Complication; Radiofrequency ablation; Interventional radiology; Radiology; Septic arthritis; Fluoroscopy; Arthritis; Ablation","score_opus":0.08817759986379606,"score_gpt":0.38884817932655635,"score_spread":0.3006705794627603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056998319","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002213315,0.96877664,0.017463552,0.0014975955,0.002166743,0.0016995535,0.00017447985,0.00018922352,0.00581892],"genre_scores_gemma":[0.014195037,0.96928465,0.0100658,0.00039990176,0.0031858769,0.00038858326,0.00013449263,0.00014133292,0.002204302],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99367636,0.0015904182,0.002118812,0.00074061955,0.00033042015,0.0015433691],"domain_scores_gemma":[0.9950457,0.0011263795,0.0013097629,0.000838293,0.0006584747,0.0010213744],"candidate_categories":["metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016961062,0.0010919344,0.00264664,0.0013192581,0.0013283688,0.00026427876,0.00064718444,0.001281538,0.0012388275],"category_scores_gemma":[0.0008946006,0.0008566294,0.0031838922,0.0010683209,0.0013246803,0.00037746422,0.00010157944,0.0029380524,0.00048507855],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056440815,0.00173181,0.033858594,0.0037432853,0.005244941,0.0015195616,0.00017944053,0.00016165368,0.000021792908,0.0034063468,0.0081655355,0.9419106],"study_design_scores_gemma":[0.002663927,0.0022095507,0.040933147,0.043490767,0.0065741865,0.13426873,0.00027597768,0.00017253717,0.000007398662,0.0050979294,0.76323724,0.0010686371],"about_ca_topic_score_codex":0.00013328237,"about_ca_topic_score_gemma":0.00010070809,"teacher_disagreement_score":0.940842,"about_ca_system_score_codex":0.0034615856,"about_ca_system_score_gemma":0.0012790437,"threshold_uncertainty_score":0.99997175},"labels":[],"label_agreement":null},{"id":"W2062070280","doi":"10.1053/j.gastro.2005.11.012","title":"Antisense Inhibition of Entamoeba histolytica Cysteine Proteases Inhibits Colonic Mucus Degradation","year":2006,"lang":"en","type":"article","venue":"Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Entamoeba histolytica; Proteases; Mucus; Microbiology; Chemistry; Cysteine; Mucin; Degradation (telecommunications); Biochemistry; Biology; Enzyme","score_opus":0.00687509156839032,"score_gpt":0.22726813342665106,"score_spread":0.22039304185826075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062070280","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970711,0.00005707071,0.00078028336,0.0006219593,0.00010603324,0.0005456668,0.0000263679,0.00005301226,0.0007385057],"genre_scores_gemma":[0.9982988,0.000008549795,0.00067906425,0.00013245855,0.000081246,0.000055741093,0.00026056974,0.000015141864,0.00046839326],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99900156,0.000061428276,0.0003459974,0.00021120587,0.00012826487,0.00025152613],"domain_scores_gemma":[0.9994583,0.0000165342,0.00017335072,0.00018401637,0.00011343191,0.000054342017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006836221,0.00013429491,0.000287518,0.00018011905,0.000056536843,0.0000036413146,0.000020536647,0.00007713559,0.00008824184],"category_scores_gemma":[0.000025222957,0.00012012185,0.000091942435,0.00010640289,0.00013334054,0.000059707236,0.00002456105,0.00009243693,0.000032715863],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001888295,0.002144747,0.82253367,0.00012215893,0.00014765903,0.00023814879,0.000038880982,0.000018446815,0.16892934,0.0006894283,0.0023792766,0.00086997147],"study_design_scores_gemma":[0.013086341,0.01283655,0.84006727,0.00024363388,0.0006007043,0.0027375016,0.000045423363,0.00029877832,0.12836373,0.0003124774,0.0012365599,0.00017102562],"about_ca_topic_score_codex":0.0003573912,"about_ca_topic_score_gemma":0.00017938261,"teacher_disagreement_score":0.040565617,"about_ca_system_score_codex":0.00012978731,"about_ca_system_score_gemma":0.000038777238,"threshold_uncertainty_score":0.48984268},"labels":[],"label_agreement":null},{"id":"W2063244242","doi":"10.1038/ajg.2009.614","title":"A Population-Based Study of Pyogenic Liver Abscesses in the United States: Incidence, Mortality, and Temporal Trends","year":2009,"lang":"en","type":"article","venue":"The American Journal of Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":353,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Incidence (geometry); Confidence interval; Pyogenic liver abscess; Population; Internal medicine; Odds ratio; Surgery; Gastroenterology; Liver abscess; Abscess","score_opus":0.025063129159904964,"score_gpt":0.3253676575329633,"score_spread":0.3003045283730584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063244242","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99880135,0.000025737663,0.000065787666,0.0009773115,0.000017957505,0.00009852476,0.0000021181986,0.0000027731764,0.000008416661],"genre_scores_gemma":[0.99878937,0.000028876653,0.00006141391,0.0010789066,0.000026003716,0.00000219243,0.000006015843,0.0000039913357,0.000003257498],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989642,0.00032718029,0.00034668713,0.00006900902,0.00016600412,0.0001269117],"domain_scores_gemma":[0.99917024,0.00008969095,0.00047273748,0.0001525588,0.00007884482,0.00003591029],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035128978,0.000085077365,0.00035921007,0.00032842587,0.000041375733,0.000005530619,0.00009897561,0.000010110155,0.000012595585],"category_scores_gemma":[0.00002094981,0.000042988697,0.00005358631,0.00037018416,0.0001306628,0.00003266834,0.000010214566,0.00015769024,2.1592804e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017983658,0.0008871358,0.99497193,0.0000021976673,0.00012264174,0.00010891268,0.000857849,0.00030701986,0.0000063280404,0.0000018311581,0.000017445484,0.00091835187],"study_design_scores_gemma":[0.001796463,0.031427916,0.9638033,0.000022776272,0.00020622463,0.00037857058,0.0020658877,0.00023586978,0.000001535936,0.00003981154,0.0000032519774,0.000018398183],"about_ca_topic_score_codex":0.002771945,"about_ca_topic_score_gemma":0.0008883948,"teacher_disagreement_score":0.031168628,"about_ca_system_score_codex":0.000029557255,"about_ca_system_score_gemma":0.000022138856,"threshold_uncertainty_score":0.419037},"labels":[],"label_agreement":null},{"id":"W2076116940","doi":"10.1097/00006454-200205000-00021","title":"Fifteen-year-old girl with fever, headache and vomiting","year":2002,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario","funders":"","keywords":"Medicine; Photophobia; Vomiting; Phonophobia; Chills; Sore throat; Headaches; Pediatrics; Nausea; Migraine; Sinusitis; Rash; Pharyngitis; Stridor; Anesthesia; Surgery; Aura; Internal medicine","score_opus":0.009790193336034378,"score_gpt":0.22231070302064904,"score_spread":0.21252050968461467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076116940","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900357,0.0014739984,0.00017314877,0.0007805255,0.00016466969,0.00026226853,0.0000070295196,0.00007442051,0.00702822],"genre_scores_gemma":[0.9944791,0.0014904931,0.00010526483,0.00035748084,0.0015600574,0.000015680469,0.000001750534,0.00002986014,0.001960266],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99891365,0.000072683346,0.0002217574,0.00017377047,0.0002907331,0.0003273879],"domain_scores_gemma":[0.9989771,0.00011691895,0.00014955614,0.00021459686,0.000121097575,0.00042073347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019354765,0.00019082888,0.0002011423,0.00016022865,0.000748407,0.0000902806,0.0000487791,0.000049523544,0.00063240365],"category_scores_gemma":[0.000119805416,0.00010852984,0.000112509166,0.0003169033,0.00007592554,0.00013634996,0.000031901352,0.00047284784,0.000100655205],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000773197,0.0003360781,0.99524045,0.00002908642,0.00013761126,0.00023774721,0.00012896028,0.00002705967,9.5264113e-7,0.00007903093,0.0027044285,0.0010012999],"study_design_scores_gemma":[0.005600495,0.0006552932,0.97997344,0.00004490533,0.0021937266,0.008856221,0.000099463796,0.0006358751,0.0000030202273,0.00058157346,0.0010931566,0.00026282368],"about_ca_topic_score_codex":0.000037122623,"about_ca_topic_score_gemma":0.0000072735893,"teacher_disagreement_score":0.015266979,"about_ca_system_score_codex":0.000113968206,"about_ca_system_score_gemma":0.000083841915,"threshold_uncertainty_score":0.69243765},"labels":[],"label_agreement":null},{"id":"W2079844538","doi":"10.1128/iai.73.6.3790-3793.2005","title":"<i>Entamoeba histolytica</i> -Secreted Products Degrade Colonic Mucin Oligosaccharides","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Entamoeba histolytica; Mucin; Biology; Mucus; Microbiology; Amoeba (genus); Intestinal mucosa; Biochemistry","score_opus":0.01790918386671666,"score_gpt":0.26993134641260946,"score_spread":0.2520221625458928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079844538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897504,0.00043510104,0.00009803928,0.0016596641,0.00023570312,0.000364047,0.0000042986476,0.00017077984,0.007281991],"genre_scores_gemma":[0.9961309,0.00044104087,0.0003533297,0.00047293367,0.00013961288,0.000034506687,0.000040967392,0.000015878912,0.0023708446],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992524,0.000059681934,0.00018112164,0.00019584745,0.00010569997,0.00020528027],"domain_scores_gemma":[0.9993923,0.000033240005,0.0000678498,0.0002820364,0.00011438972,0.00011024143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015103474,0.0001539568,0.00020647833,0.00013739527,0.00034535985,0.000024983361,0.000025890802,0.00009293906,0.0002424136],"category_scores_gemma":[0.00012073525,0.00013212017,0.00006132978,0.00027155585,0.00010969961,0.00017023337,0.000035581,0.00027975175,0.00013903655],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005827536,0.0040381313,0.7990415,0.00032811824,0.0008548713,0.000046322755,0.0014825014,0.000018305755,0.048653375,0.0024217637,0.01803224,0.12450009],"study_design_scores_gemma":[0.0035300255,0.00089827337,0.71889025,0.0000874591,0.00033003933,0.0009354703,0.000065546,0.00048299826,0.03335167,0.000112618574,0.24102299,0.0002926682],"about_ca_topic_score_codex":0.0013841678,"about_ca_topic_score_gemma":0.00016960314,"teacher_disagreement_score":0.22299075,"about_ca_system_score_codex":0.00021778194,"about_ca_system_score_gemma":0.00008525217,"threshold_uncertainty_score":0.53877044},"labels":[],"label_agreement":null},{"id":"W2082470671","doi":"10.1038/mi.2013.100","title":"Gal-lectin-dependent contact activates the inflammasome by invasive Entamoeba histolytica","year":2013,"lang":"en","type":"article","venue":"Mucosal Immunology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates","keywords":"Entamoeba histolytica; Inflammasome; Biology; Microbiology; Immune system; Innate immune system; Lectin; Pathogen; Entamoeba; Extracellular; Immunology; Acquired immune system; Cell biology; Inflammation","score_opus":0.006619208172053483,"score_gpt":0.2225433528936001,"score_spread":0.21592414472154664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082470671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9804003,0.0008541213,0.00004670211,0.0042992146,0.0006489049,0.0008137899,0.0000059260747,0.00011518152,0.012815841],"genre_scores_gemma":[0.9891991,0.0001810224,0.000045790544,0.0006789397,0.00008832482,0.0002634338,0.00005446421,0.00003113184,0.009457816],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987707,0.00009673019,0.0002738589,0.00028298373,0.0001441874,0.00043154703],"domain_scores_gemma":[0.99891114,0.0003005729,0.00012157745,0.0004531904,0.00013400656,0.000079491816],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007726478,0.00022884693,0.0003267375,0.00009788424,0.0002620747,0.0000339161,0.00014273166,0.00018011298,0.0025497293],"category_scores_gemma":[0.0001823266,0.00014556639,0.00011501471,0.00014017125,0.00019485845,0.00014883163,0.000101461184,0.0004187065,0.0019307922],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004425714,0.0014727198,0.12611628,0.000038770755,0.0029639695,0.00017386317,0.0010748163,9.566562e-7,0.796534,0.0028021657,0.05087223,0.01750765],"study_design_scores_gemma":[0.010409647,0.0037193785,0.56337816,0.00010272219,0.00070081465,0.0021442752,0.0018463685,0.000040720017,0.315987,0.0019179755,0.0990144,0.0007385643],"about_ca_topic_score_codex":0.0021715933,"about_ca_topic_score_gemma":0.000069342765,"teacher_disagreement_score":0.48054704,"about_ca_system_score_codex":0.00034542166,"about_ca_system_score_gemma":0.00013556353,"threshold_uncertainty_score":0.9988463},"labels":[],"label_agreement":null},{"id":"W2083287893","doi":"10.2214/ajr.06.0181","title":"Percutaneous Drainage of Abdominal Abscesses in Pediatric Crohn's Disease","year":2007,"lang":"en","type":"article","venue":"American Journal of Roentgenology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Medicine; Percutaneous; Crohn's disease; Crohn disease; Abscess; Radiology; Surgery; Drainage; Disease; General surgery; Internal medicine","score_opus":0.005926591777275952,"score_gpt":0.274023760023504,"score_spread":0.26809716824622803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083287893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969428,0.00061498885,0.00060438126,0.0003134657,0.00014590453,0.000088111854,0.0000027234578,0.0000050717463,0.0012825152],"genre_scores_gemma":[0.9980092,0.00038853142,0.00125092,0.00011480233,0.0001455159,6.121445e-7,0.0000012696307,0.000012344211,0.00007677163],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989071,0.00004579448,0.00050650525,0.000107209606,0.00017099245,0.00026241908],"domain_scores_gemma":[0.99889964,0.00012044112,0.0004800968,0.00013823147,0.00017215336,0.00018944396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022574862,0.00010777919,0.0004457205,0.0005746308,0.000027429835,0.0000024817905,0.000079883175,0.000030416975,0.00010298799],"category_scores_gemma":[0.00014260387,0.00008557727,0.00013256221,0.00041005402,0.00026202784,0.000043410506,0.000020050082,0.00020047525,0.000008024192],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030206952,0.0011330382,0.91434246,0.000060358136,0.0001727373,0.032766387,0.0004957474,0.00004566832,0.00067447795,0.00012398027,0.00006959677,0.047094855],"study_design_scores_gemma":[0.0013350743,0.0032756387,0.98594105,0.00003383363,0.00036072198,0.0073191198,0.0011208706,0.000007733346,0.00014233217,0.00019867787,0.00018809109,0.00007687823],"about_ca_topic_score_codex":0.00011060114,"about_ca_topic_score_gemma":0.000033066568,"teacher_disagreement_score":0.07159857,"about_ca_system_score_codex":0.00011272865,"about_ca_system_score_gemma":0.00020205768,"threshold_uncertainty_score":0.348974},"labels":[],"label_agreement":null},{"id":"W2083428043","doi":"10.1007/s12275-014-4241-7","title":"Profiling of the bacteria responsible for pyogenic liver abscess by 16S rRNA gene pyrosequencing","year":2014,"lang":"en","type":"article","venue":"The Journal of Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Optech (Canada)","funders":"","keywords":"Microbiology; Biology; Pyrosequencing; 16S ribosomal RNA; Ribosomal RNA; Bacteria; Peptostreptococcus; Streptococcus anginosus; Streptococcus; Gene; Bacteroides; Genetics","score_opus":0.013343317459331398,"score_gpt":0.2532631498482361,"score_spread":0.2399198323889047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083428043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99730074,0.00045236567,0.0011614638,0.00042646631,0.0003131796,0.0002263859,0.000022055483,0.0000034582972,0.000093860996],"genre_scores_gemma":[0.99732214,0.00009494488,0.0017981995,0.00020459412,0.0001300112,0.0000022315294,0.000005177392,0.0000115136545,0.0004311624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992688,0.00017519106,0.0003118014,0.00006151951,0.000034729557,0.00014800527],"domain_scores_gemma":[0.99900985,0.000222093,0.00037649687,0.00018324764,0.00018117785,0.00002710737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077394256,0.00008253011,0.00024373525,0.000048118818,0.00011037254,0.0000030065216,0.00013713565,0.00007335099,0.00002984377],"category_scores_gemma":[0.00012122764,0.000038428287,0.00013780636,0.00006850219,0.00012481221,0.000024585308,0.000034008863,0.00014540573,0.0000056488298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047521843,0.000054320033,0.0016764248,0.000018252185,0.0001595862,0.0000011963841,0.0001087082,0.000010205494,0.99629515,0.000040521558,0.00079244364,0.00036795458],"study_design_scores_gemma":[0.0015330785,0.00065928686,0.0026602142,0.000065008935,0.00030322408,0.0019403226,0.000051864805,0.000024368115,0.9888789,0.00012011547,0.0037190022,0.00004463427],"about_ca_topic_score_codex":0.000021715903,"about_ca_topic_score_gemma":0.0000073824694,"teacher_disagreement_score":0.0074162884,"about_ca_system_score_codex":0.000061829036,"about_ca_system_score_gemma":0.00013981394,"threshold_uncertainty_score":0.156706},"labels":[],"label_agreement":null},{"id":"W2083775197","doi":"10.4021//jmc.v3i6.844","title":"Pyogenic Liver Abscess With Complicating Intestinal Tuberculosis","year":2012,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Pyogenic liver abscess; Liver abscess; Diverticulitis; Abscess; Tuberculosis; Gastroenterology; Klebsiella pneumoniae; INTESTINAL TUBERCULOSIS; Polypectomy; Colonoscopy; Internal medicine; Surgery; Colorectal cancer; Pathology; Cancer","score_opus":0.04059245675611738,"score_gpt":0.3302476133089313,"score_spread":0.28965515655281393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083775197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946524,0.0014347521,0.0009674527,0.0012085295,0.00012338434,0.0000640692,0.0000010991371,0.00001210757,0.0015362008],"genre_scores_gemma":[0.9967164,0.00012041966,0.0019973426,0.00040216555,0.00068957824,0.0000028717,0.0000016141087,0.000010947294,0.000058668014],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99873984,0.00003193436,0.0002769578,0.000058677924,0.00070209155,0.00019048741],"domain_scores_gemma":[0.9988293,0.00025969473,0.00017100481,0.00009407505,0.00017468851,0.00047125499],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037029016,0.00009015826,0.00023733577,0.00008110772,0.00006890474,0.000008517774,0.00006383518,0.00006085538,0.0012822463],"category_scores_gemma":[0.000554744,0.000050644558,0.00009373332,0.00012383552,0.00009793327,0.00010565768,0.0000243558,0.00031957662,0.00003235165],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038916117,0.0019733435,0.93859076,0.00011898916,0.0005537895,0.0054997304,0.0002921783,0.0000018809842,0.0001339668,0.00023398887,0.0044521284,0.047760095],"study_design_scores_gemma":[0.004432926,0.0029539934,0.6005932,0.0015638273,0.0012427012,0.379723,0.00064646796,0.00020997378,0.0011506961,0.000020097628,0.0072690444,0.00019405286],"about_ca_topic_score_codex":0.00007638821,"about_ca_topic_score_gemma":0.0000070460887,"teacher_disagreement_score":0.3742233,"about_ca_system_score_codex":0.00007451754,"about_ca_system_score_gemma":0.00014566087,"threshold_uncertainty_score":0.9996307},"labels":[],"label_agreement":null},{"id":"W2085336040","doi":"10.1016/s0188-4409(00)00226-5","title":"Production of Prostaglandin E2 by Entamoeba histolytica via a Novel Cyclooxygenase","year":2000,"lang":"en","type":"article","venue":"Archives of Medical Research","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Medical Research Council","keywords":"Entamoeba histolytica; Cyclooxygenase; Prostaglandin E2; Entamoeba; Medicine; Biology; Immunology; Internal medicine; Biochemistry; Enzyme","score_opus":0.031429660762355954,"score_gpt":0.3672107373494629,"score_spread":0.335781076587107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085336040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9663769,0.00043185434,0.00049220247,0.0048994315,0.00008061478,0.0007653868,0.000027091013,0.000025207337,0.026901297],"genre_scores_gemma":[0.98722804,0.0007465711,0.00067818625,0.000032808242,0.00010615058,0.000053086544,0.000061542465,0.00001720321,0.011076404],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99715406,0.00011983943,0.00036318993,0.0002981883,0.0016926507,0.00037205598],"domain_scores_gemma":[0.99875146,0.00037983325,0.00004793709,0.0003672932,0.00008744354,0.00036602875],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00079085544,0.00010647919,0.00029542818,0.00025039783,0.00009896225,0.0000037802738,0.00016120097,0.00009260115,0.0026188223],"category_scores_gemma":[0.0009767982,0.00007887034,0.00010116146,0.00033735714,0.00097593846,0.000040204905,0.00006740863,0.0004670342,0.00005047325],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025093486,0.0088258125,0.019804822,0.0006839542,0.000423175,0.000094641175,0.0017393586,0.000001973042,0.1258759,0.0009815404,0.015227784,0.8238317],"study_design_scores_gemma":[0.034443308,0.015369918,0.20219366,0.004904811,0.0005175574,0.0016468759,0.0011828041,0.008239139,0.3284157,0.00680249,0.3953143,0.0009694283],"about_ca_topic_score_codex":0.00079284725,"about_ca_topic_score_gemma":0.000018560233,"teacher_disagreement_score":0.82286227,"about_ca_system_score_codex":0.000049470353,"about_ca_system_score_gemma":0.00034656306,"threshold_uncertainty_score":0.9982929},"labels":[],"label_agreement":null},{"id":"W2087203078","doi":"10.1016/j.ejcts.2010.01.056","title":"Reply to Hossein Mandagar et al.","year":2010,"lang":"en","type":"article","venue":"European Journal of Cardio-Thoracic Surgery","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Medicine; Psychology","score_opus":0.02343207942358702,"score_gpt":0.3106297876772541,"score_spread":0.2871977082536671,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087203078","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9360404,0.00023186907,0.0014856246,0.008110786,0.0022844179,0.00012547914,0.000005541549,0.00004389726,0.051671974],"genre_scores_gemma":[0.9861672,0.00012797689,0.0022937306,0.009238226,0.0006700218,0.0000014560375,0.0000047220537,0.000063726446,0.001432951],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979431,0.00057480374,0.0005942121,0.00018913668,0.0004258069,0.00027295397],"domain_scores_gemma":[0.9982666,0.00020746008,0.00027310403,0.00043213685,0.00039178552,0.00042892815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0056311456,0.00017715167,0.0005250974,0.00039498738,0.00009364986,0.000045947454,0.000085507614,0.00002372275,0.00019954705],"category_scores_gemma":[0.0007902998,0.0001353491,0.00056082144,0.0002798762,0.000046732657,0.00014428259,0.000042778,0.00057468517,0.00038963105],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00095193426,0.0003574933,0.13587816,0.00003751882,0.0010273457,0.02032885,0.00037618334,0.000032803127,0.005797004,0.00003250098,0.5386223,0.2965579],"study_design_scores_gemma":[0.00030862167,0.00024300363,0.12992941,0.00015746018,0.00016364818,0.0068346555,0.00004971122,0.0000015297782,0.0015699518,0.0000065616564,0.8606,0.00013542712],"about_ca_topic_score_codex":0.0000065968384,"about_ca_topic_score_gemma":7.5074723e-7,"teacher_disagreement_score":0.3219777,"about_ca_system_score_codex":0.000048071768,"about_ca_system_score_gemma":0.00018150054,"threshold_uncertainty_score":0.5519376},"labels":[],"label_agreement":null},{"id":"W2087377958","doi":"10.4021//jmc.v4i2.900","title":"Toxic Megacolon due to Fulminant Amebic Colitis in a non Endemic Area","year":2012,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Toxic megacolon; Fulminant; Colitis; Perforation; Gastroenterology; Entamoeba histolytica; Megacolon; Loperamide; Peritonitis; Internal medicine; Disease; Immunology; Diarrhea; Ulcerative colitis","score_opus":0.026916846044102383,"score_gpt":0.3298356278789317,"score_spread":0.30291878183482934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087377958","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941777,0.00056635356,0.00023604724,0.003395038,0.0005599672,0.00016758483,0.000002970523,0.0000063842444,0.0008879752],"genre_scores_gemma":[0.99762815,0.00013223059,0.0002526103,0.0010588598,0.00067470013,0.000011780875,0.0000016462728,0.000010841516,0.0002292054],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983701,0.000055142053,0.0004472499,0.00008110312,0.00072426617,0.0003221188],"domain_scores_gemma":[0.9987268,0.00019989556,0.00013224673,0.00010421746,0.00008135157,0.00075551175],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00074216764,0.00011058712,0.00040680033,0.00027194663,0.00003804009,0.0000069645534,0.00007175447,0.00014234154,0.001241567],"category_scores_gemma":[0.0012552708,0.00007383825,0.00011501122,0.00023602389,0.000045154065,0.00010595617,0.000033988057,0.00038815383,0.000050092844],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002964429,0.008474097,0.6129553,0.0002898949,0.00059189386,0.10886866,0.0031645007,0.000010655456,0.0016084217,0.0003339007,0.09069206,0.17004623],"study_design_scores_gemma":[0.0064115566,0.0047383322,0.839914,0.0018720324,0.00036186544,0.11381172,0.0010709198,0.00009216659,0.0024505942,0.0000697269,0.028988753,0.00021830785],"about_ca_topic_score_codex":0.0001856778,"about_ca_topic_score_gemma":0.000101376216,"teacher_disagreement_score":0.22695875,"about_ca_system_score_codex":0.0002819295,"about_ca_system_score_gemma":0.00025238068,"threshold_uncertainty_score":0.99967146},"labels":[],"label_agreement":null},{"id":"W2087814923","doi":"10.1371/journal.pone.0073339","title":"Entamoeba histolytica Contains an Occludin-Like Protein That Can Alter Colonic Epithelial Barrier Function","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Occludin; Entamoeba histolytica; Tight junction; Cell biology; Barrier function; Biology; Immunoprecipitation; Virulence; Intestinal mucosa; Claudin; Epithelium; Intestinal epithelium; Cell junction; Microbiology; Immunology; Antibody; Biochemistry; Gene; Cell; Medicine; Genetics","score_opus":0.04035560873106254,"score_gpt":0.23735377017751508,"score_spread":0.19699816144645255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087814923","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933905,0.00004770267,0.00008173994,0.0010268666,0.00014235778,0.0017893678,0.000026748923,0.00013194531,0.0033627541],"genre_scores_gemma":[0.9843109,0.000009893842,0.0005193201,0.0007418578,0.00023828146,0.0005638964,0.00009332213,0.000038325485,0.013484176],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987984,0.00005129052,0.00019359314,0.00030827217,0.00031563555,0.00033285035],"domain_scores_gemma":[0.99908274,0.000020086081,0.0000773693,0.00038917814,0.00015646707,0.00027415404],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0000718553,0.000189562,0.00031003487,0.00010442111,0.00018800344,0.000029292913,0.00005301826,0.000115544644,0.0038144647],"category_scores_gemma":[0.000033572625,0.00015607782,0.00007669833,0.00009546622,0.00008508,0.00017608152,0.000027969545,0.00019595993,0.00081874855],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016044853,0.028500669,0.40053773,0.00044863202,0.0051647136,0.0002449741,0.0015898664,0.0000019824226,0.5491123,0.0032180373,0.0036806345,0.005895935],"study_design_scores_gemma":[0.026309768,0.023610704,0.56777674,0.0013040042,0.006789418,0.00020801487,0.0011741652,0.0024262918,0.35351244,0.003225462,0.011798946,0.0018640663],"about_ca_topic_score_codex":0.0014447559,"about_ca_topic_score_gemma":0.00031117818,"teacher_disagreement_score":0.19559991,"about_ca_system_score_codex":0.0003829539,"about_ca_system_score_gemma":0.00013217432,"threshold_uncertainty_score":0.99995923},"labels":[],"label_agreement":null},{"id":"W2091919339","doi":"10.1097/00001574-200101000-00004","title":"Emerging and reemerging intestinal protozoa","year":2001,"lang":"en","type":"article","venue":"Current Opinion in Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institutes of Health; Burroughs Wellcome Fund; Howard Hughes Medical Institute","keywords":"Protozoa; Cyclospora cayetanensis; Entamoeba histolytica; Cyclospora; Protozoan infection; Amoebiasis; Population; Biology; Entamoeba; Diarrhea; Environmental health; Medicine; Immunology; Cryptosporidium; Microbiology; Pathology; Feces","score_opus":0.03771076004756447,"score_gpt":0.3539520704095192,"score_spread":0.31624131036195474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091919339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939375,0.00040360118,0.0022687693,0.0009937643,0.0014333318,0.00048392668,0.0000012173836,0.00004300854,0.0004348704],"genre_scores_gemma":[0.9985025,0.00051230425,0.0004949761,0.000051222247,0.00022717609,0.00014080488,0.000024795496,0.000010893265,0.000035347373],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991469,0.00004238453,0.00022330703,0.00023165546,0.0000738519,0.000281912],"domain_scores_gemma":[0.9996944,0.000013860692,0.000054769247,0.00012244565,0.00003394929,0.0000805592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000098796234,0.00011604364,0.00018223259,0.00020960614,0.00005114974,0.00000581903,0.000030298734,0.00003092827,0.00009333047],"category_scores_gemma":[0.000037964503,0.000103219994,0.000034811645,0.00011193021,0.00006946744,0.000056292578,0.000052749598,0.00020336205,0.000014683107],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023730802,0.00023109565,0.9829429,0.00006317594,0.000014081823,0.000010428761,0.00007821797,0.0000038832827,0.000028583467,0.00009893194,0.00027265624,0.016018754],"study_design_scores_gemma":[0.0035845912,0.0010766416,0.9705052,0.00047490452,0.000019628089,0.0016039516,0.00007860842,0.0010403771,0.0000067114265,0.00014258789,0.021397604,0.00006919749],"about_ca_topic_score_codex":0.000018018347,"about_ca_topic_score_gemma":0.0000067761534,"teacher_disagreement_score":0.021124948,"about_ca_system_score_codex":0.00005324694,"about_ca_system_score_gemma":0.000014695972,"threshold_uncertainty_score":0.42091894},"labels":[],"label_agreement":null},{"id":"W2095427405","doi":"10.1046/j.1365-3024.2003.00607.x","title":"Prospect for an <i>Entamoeba histolytica</i> Gal‐lectin‐based vaccine","year":2003,"lang":"en","type":"review","venue":"Parasite Immunology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Entamoeba histolytica; Biology; Immunogenicity; DNA vaccination; Lectin; Immunology; Amoebiasis; Virology; Vaccination; Antigen; Microbiology; Immunization","score_opus":0.07470694969148105,"score_gpt":0.4153063508833704,"score_spread":0.34059940119188936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095427405","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000042022944,0.9865936,0.00082455564,0.000043561857,0.0011097079,0.003654917,0.000057195644,0.00017549231,0.0074989246],"genre_scores_gemma":[0.00011566493,0.9887686,0.0018829209,0.00024797852,0.00021458232,0.0018324507,0.0013540665,0.00017639578,0.0054073753],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974893,0.00018901676,0.0007554911,0.0007808759,0.0001282517,0.00065711956],"domain_scores_gemma":[0.998061,0.00021690417,0.00042204696,0.0009917091,0.0001664681,0.0001418591],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001964311,0.0006749019,0.0024610183,0.0004244964,0.00023927218,0.000021788,0.00016652365,0.0006400702,0.00042035274],"category_scores_gemma":[0.00009729828,0.0005311307,0.00079752057,0.0004312888,0.000090135705,0.000062670304,0.00002611041,0.0005307531,0.0004403619],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042047934,0.0030002133,0.0014729755,0.0085526025,0.0036335723,0.00014923609,0.000026842365,6.3333636e-7,0.00002393251,0.0013696268,0.0058879307,0.97546196],"study_design_scores_gemma":[0.002848838,0.0023733557,0.00013880072,0.0014951124,0.0044009364,0.0012442173,0.0000036893648,0.000008826073,0.000019822257,0.000038186354,0.987018,0.00041019797],"about_ca_topic_score_codex":0.000060975857,"about_ca_topic_score_gemma":0.000022458711,"teacher_disagreement_score":0.98113006,"about_ca_system_score_codex":0.00071251264,"about_ca_system_score_gemma":0.0006163159,"threshold_uncertainty_score":0.999714},"labels":[],"label_agreement":null},{"id":"W2100947533","doi":"10.1086/521170","title":"Diabetes Mellitus and Pyogenic Liver Abscess: Risk and Prognosis","year":2007,"lang":"en","type":"letter","venue":"Clinical Infectious Diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"University of Manitoba","keywords":"Medicine; Pyogenic liver abscess; Diabetes mellitus; Liver abscess; Abscess; Internal medicine; Gastroenterology; Surgery; Endocrinology","score_opus":0.027348215506309795,"score_gpt":0.32820791071716066,"score_spread":0.3008596952108509,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100947533","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94763845,0.031805202,0.000046048273,0.01487033,0.0010093786,0.0016684,0.00042709737,0.00051731337,0.0020177877],"genre_scores_gemma":[0.70108354,0.04065518,0.00006862271,0.24919137,0.0066666002,0.0002866602,0.0005480904,0.00017740157,0.0013225336],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99746025,0.00021021473,0.00069753936,0.00084064173,0.00027094077,0.00052039884],"domain_scores_gemma":[0.99708337,0.0015538358,0.0003420203,0.0004285175,0.00016987084,0.00042238613],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000262941,0.00048407094,0.001000028,0.00024401459,0.00027973382,0.00008727597,0.00005863579,0.0009921879,0.00023058624],"category_scores_gemma":[0.0007508489,0.00038154965,0.00046288708,0.00019053447,0.00077721704,0.00008742459,0.00011998655,0.0015060749,0.000118979646],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021366786,0.0006519151,0.8147516,0.00037663846,0.0010212103,0.00049147685,0.000009365055,8.76098e-8,1.5132566e-7,0.0000033036054,0.14519374,0.03747913],"study_design_scores_gemma":[0.0023094872,0.0012625187,0.74738127,0.0003018795,0.005796218,0.00005836262,0.0000054988245,0.000033541866,0.0000044087096,0.00040814743,0.2420121,0.00042655662],"about_ca_topic_score_codex":0.00012255674,"about_ca_topic_score_gemma":0.0000220942,"teacher_disagreement_score":0.24655491,"about_ca_system_score_codex":0.00007796336,"about_ca_system_score_gemma":0.00012281133,"threshold_uncertainty_score":0.9998636},"labels":[],"label_agreement":null},{"id":"W2101072968","doi":"10.1503/cmaj.091926","title":"Entamoeba histolytica liver abscess","year":2010,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Royal Columbian Hospital","funders":"","keywords":"Chills; Medicine; Entamoeba histolytica; Abdomen; Liver abscess; Diarrhea; Emergency department; Abdominal pain; Abscess; General surgery; Surgery; Internal medicine; Immunology; Nursing","score_opus":0.004860630956953735,"score_gpt":0.2334226964772438,"score_spread":0.22856206552029007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101072968","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84714097,0.00011971686,0.00010289906,0.03120107,0.003801204,0.00018317853,0.000016746717,0.0000438659,0.11739035],"genre_scores_gemma":[0.9858338,0.00005650879,0.00025955902,0.00667967,0.0018504565,0.0000046451287,0.000009743104,0.000013828659,0.0052917483],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985092,0.00003134834,0.0002348521,0.000107330554,0.0007689153,0.00034834462],"domain_scores_gemma":[0.9975632,0.000065702014,0.000101043915,0.000101000514,0.00030727565,0.0018617692],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00052939507,0.00008903915,0.00016027235,0.00016341674,0.0002876957,0.000042224336,0.00007778803,0.00033964246,0.029417668],"category_scores_gemma":[0.0009301665,0.000074026735,0.000104107836,0.00013585038,0.000041484018,0.000077206496,0.0000070598185,0.0012124234,0.0009134229],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017852139,0.00023333883,0.57541037,0.000012016261,0.00040155853,0.004392917,0.00028286743,2.4199625e-7,0.000103196704,0.0019892487,0.3172247,0.099931695],"study_design_scores_gemma":[0.0013280478,0.000056398687,0.19346893,0.000026328486,0.00008226891,0.0034192135,0.000054014643,0.00013135526,0.000027508897,0.000107955864,0.80120546,0.00009250045],"about_ca_topic_score_codex":0.003447053,"about_ca_topic_score_gemma":0.034419317,"teacher_disagreement_score":0.48398075,"about_ca_system_score_codex":0.0008956326,"about_ca_system_score_gemma":0.0026043474,"threshold_uncertainty_score":0.99986446},"labels":[],"label_agreement":null},{"id":"W2102942024","doi":"10.1128/jcm.39.2.716-719.2001","title":"Development of Monoclonal Antibodies Which Specifically Recognize<i>Entamoeba histolytica</i>in Preserved Stool Samples","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"","keywords":"Entamoeba histolytica; Dispar; Giardia lamblia; Monoclonal antibody; Entamoeba; Microbiology; Biology; Entamoeba coli; Protozoa; Giardia; Recombinant DNA; Antibody; Virology; Immunology","score_opus":0.12606731498896173,"score_gpt":0.3935622056199537,"score_spread":0.26749489063099197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102942024","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960535,0.00036677913,0.0004218739,0.00081854005,0.0006006506,0.0001813982,0.000010087518,0.0000069965167,0.0015401703],"genre_scores_gemma":[0.95111173,0.00070644746,0.047298525,0.00017241476,0.0002580407,0.0000022711297,0.00002328202,0.000014746343,0.00041252485],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99673206,0.00019030219,0.002492939,0.00021906912,0.00009188426,0.00027377173],"domain_scores_gemma":[0.99761945,0.00066904584,0.00086023106,0.00018917068,0.00051457103,0.0001475353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001285144,0.0001658311,0.0010967316,0.00020895858,0.000045160694,0.0000049478335,0.00014434334,0.00025195398,0.00049752404],"category_scores_gemma":[0.0011512182,0.00011801091,0.0002983158,0.0002019241,0.00019027965,0.000062427425,0.00006346914,0.0005180861,0.00003492696],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027770437,0.002703171,0.94599205,0.000034973335,0.0006365854,0.00019311962,0.00012167968,0.000004808418,0.029510535,0.00006212036,0.0016737474,0.016290145],"study_design_scores_gemma":[0.0073376116,0.001508089,0.876142,0.0003069491,0.00019811539,0.0017079335,0.00012745387,0.000010225062,0.0027590774,0.0002074967,0.10953093,0.00016407688],"about_ca_topic_score_codex":0.00001731257,"about_ca_topic_score_gemma":0.0001745085,"teacher_disagreement_score":0.10785719,"about_ca_system_score_codex":0.000107929925,"about_ca_system_score_gemma":0.0005690607,"threshold_uncertainty_score":0.5447539},"labels":[],"label_agreement":null},{"id":"W2105955329","doi":"10.1086/600298","title":"A Possible Cluster of Sexually Transmitted <i>Entamoeba histolytica:</i> Genetic Analysis of a Highly Virulent Strain","year":2009,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University Health Network; Toronto Public Health; Toronto General Hospital; St. Michael's Hospital","funders":"London School of Hygiene and Tropical Medicine","keywords":"Entamoeba histolytica; Transmission (telecommunications); Medicine; Outbreak; Genotyping; Virulence; Index case; Feces; Contact tracing; Sexual transmission; Virology; Cluster (spacecraft); Genotype; Biology; Immunology; Microbiology; Internal medicine; Disease; Genetics","score_opus":0.02019767510638642,"score_gpt":0.3418817185872544,"score_spread":0.321684043480868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105955329","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99481153,0.00034947885,0.0015875316,0.00028845936,0.00013135752,0.00047622315,0.00024751888,0.00009322304,0.0020146705],"genre_scores_gemma":[0.9982268,0.00014117867,0.00016473563,0.00099137,0.00007921466,0.00001739601,0.00011351496,0.000016842054,0.0002488994],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99778724,0.00014522942,0.0011304592,0.00038950346,0.00029384418,0.00025371416],"domain_scores_gemma":[0.99829245,0.00032204852,0.00032399953,0.000506923,0.00022910285,0.000325484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016106604,0.0002218997,0.001038786,0.0004124317,0.000060927712,0.000009631376,0.00008098096,0.00015032619,0.00030373377],"category_scores_gemma":[0.00021822022,0.0001818654,0.000980673,0.0009975989,0.00036756063,0.00005607506,0.000018526625,0.00015927514,0.00001445396],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003371267,0.01015684,0.9622074,0.000089004636,0.0042317575,0.000053641576,0.00007625001,0.00035385496,0.00023820839,0.00028150209,0.0003757023,0.021598712],"study_design_scores_gemma":[0.0036949487,0.0032322954,0.97825116,0.00006201501,0.012574147,0.000008939271,0.000025228144,0.0013200247,0.000082081046,0.00044582525,0.0001504711,0.0001528907],"about_ca_topic_score_codex":0.00011406489,"about_ca_topic_score_gemma":0.00005210978,"teacher_disagreement_score":0.02144582,"about_ca_system_score_codex":0.00008320501,"about_ca_system_score_gemma":0.0002203175,"threshold_uncertainty_score":0.74162555},"labels":[],"label_agreement":null},{"id":"W2108229064","doi":"10.1128/ec.5.1.148-154.2006","title":"Pyruvate-Phosphate Dikinase of Oxymonads and Parabasalia and the Evolution of Pyrophosphate-Dependent Glycolysis in Anaerobic Eukaryotes","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Genome Canada","keywords":"Phosphofructokinase; Entamoeba histolytica; Biochemistry; Biology; Pyrophosphate; Glycolysis; Enzyme; Pyruvate kinase; Entamoeba; Phosphofructokinase 2; Microbiology","score_opus":0.003436896290048626,"score_gpt":0.19807211862118715,"score_spread":0.19463522233113853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108229064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904208,0.0065599615,0.0001444729,0.0001258513,0.00008153321,0.0005020249,0.00001066806,0.000015597161,0.0021390596],"genre_scores_gemma":[0.99825525,0.0003650638,0.000303174,0.000019011579,0.00002250137,0.000021739814,0.0000137031475,0.000017182883,0.0009823648],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988421,0.00006229615,0.00044237968,0.00024214335,0.00020368704,0.00020737019],"domain_scores_gemma":[0.9992922,0.00013205162,0.0001857828,0.0002589122,0.00007475404,0.000056331657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002721182,0.00017379453,0.00044143907,0.000121422905,0.00006593237,0.000009006164,0.000048252263,0.00007528595,0.00005666668],"category_scores_gemma":[0.000028798104,0.00011832901,0.000079695565,0.0003353311,0.00034435446,0.000069466965,0.000054836124,0.00011310738,0.000004860318],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054440385,0.0005972357,0.99357855,0.00015562591,0.000067701534,0.000056493027,0.00019079927,0.00017933182,0.0012119346,0.0026769007,0.000056520967,0.00068450597],"study_design_scores_gemma":[0.007211383,0.00029921188,0.9727929,0.00009067186,0.00031415888,0.000019377958,0.0002304171,0.0013603511,0.016167225,0.0013962445,0.000011732377,0.00010629571],"about_ca_topic_score_codex":0.01655083,"about_ca_topic_score_gemma":0.00042935662,"teacher_disagreement_score":0.020785617,"about_ca_system_score_codex":0.00011539752,"about_ca_system_score_gemma":0.000066020526,"threshold_uncertainty_score":0.98999804},"labels":[],"label_agreement":null},{"id":"W2110085915","doi":"10.1128/aac.02576-14","title":"Hsp90 Inhibitors as New Leads To Target Parasitic Diarrheal Diseases","year":2014,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; University of California, San Diego; Instituto Mexicano del Seguro Social; National Institute of Diabetes and Digestive and Kidney Diseases; Bill and Melinda Gates Foundation","keywords":"Giardia lamblia; Entamoeba histolytica; Microbiology; In vivo; Antiparasitic; Antiparasitic agent; Cytotoxicity; Metronidazole; Biology; Pharmacology; In vitro; Biochemistry; Antibiotics; Medicine","score_opus":0.007269012453277378,"score_gpt":0.2669878976723725,"score_spread":0.25971888521909514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110085915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887286,0.000023979155,0.00047921416,0.007898511,0.00022326219,0.00031590488,0.000010662355,0.00006202885,0.0022578428],"genre_scores_gemma":[0.96827847,0.0001341665,0.00071053195,0.025022376,0.00047419206,0.0000064886,0.000040793395,0.000032308344,0.0053006867],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999184,0.000014071881,0.000159922,0.0002751408,0.00010404653,0.00026278815],"domain_scores_gemma":[0.9993172,0.000016078706,0.000036802263,0.00017619142,0.000029032979,0.0004246854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003440892,0.00018336419,0.00025804623,0.000073152376,0.00013918633,0.00003706438,0.0000404358,0.000068306406,0.0004999404],"category_scores_gemma":[0.00001964848,0.00014668112,0.000092123046,0.0001188484,0.000045964494,0.00005531084,0.000013812076,0.000068011715,0.00021249354],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037167972,0.0010004626,0.7453163,0.000061131155,0.0002557738,0.00006468649,0.00046213288,0.000008171729,0.0065282695,0.00034689813,0.20656581,0.03901867],"study_design_scores_gemma":[0.008731468,0.0017139826,0.5131878,0.00024076112,0.00026246594,0.00029135047,0.0000316843,0.00006699806,0.032708608,0.00072910404,0.44144148,0.0005942731],"about_ca_topic_score_codex":0.00024763172,"about_ca_topic_score_gemma":0.0000050936965,"teacher_disagreement_score":0.23487566,"about_ca_system_score_codex":0.000032062107,"about_ca_system_score_gemma":0.000059864957,"threshold_uncertainty_score":0.5981482},"labels":[],"label_agreement":null},{"id":"W2110141337","doi":"10.1128/iai.01217-07","title":"Toll-Like Receptor 9-Dependent Macrophage Activation by <i>Entamoeba histolytica</i> DNA","year":2007,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Association of Gastroenterology; McGill University","keywords":"Entamoeba histolytica; Biology; TLR9; Toll-Like Receptor 9; Molecular biology; Innate immune system; Transfection; Cell culture; Immune system; Microbiology; Gene expression; DNA methylation; Immunology; Gene; Biochemistry","score_opus":0.009158591218771005,"score_gpt":0.26237160192866327,"score_spread":0.25321301070989227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110141337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9760612,0.00009263334,0.0033177475,0.00015216356,0.0005332638,0.0003038282,0.000008389567,0.00012970748,0.019401032],"genre_scores_gemma":[0.9934172,0.00018286429,0.000099750876,0.0004843715,0.00007539861,0.000013476898,0.00010459147,0.000017831684,0.005604507],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99918026,0.000048065693,0.00022792617,0.00017739377,0.00015447027,0.00021190483],"domain_scores_gemma":[0.99941194,0.000054517823,0.00008418037,0.00022284035,0.00008664783,0.00013987039],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029666253,0.00015143186,0.00017463411,0.00012707888,0.00035965742,0.000024885536,0.000023177106,0.00012918437,0.0005514657],"category_scores_gemma":[0.000052325016,0.00013561329,0.00006624734,0.00018197193,0.000075632364,0.00017283531,0.000032434033,0.00028570002,0.00011699971],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011251376,0.0040865964,0.33453643,0.00015373534,0.0005561219,0.000036576916,0.0007435673,0.0000018807601,0.4636765,0.0005222947,0.030834632,0.16372651],"study_design_scores_gemma":[0.0060943426,0.0013004382,0.40556568,0.00010458803,0.00023327304,0.00044652174,0.0002922162,0.000040873394,0.2621137,0.00009446321,0.32327846,0.000435473],"about_ca_topic_score_codex":0.0015769766,"about_ca_topic_score_gemma":0.00005467389,"teacher_disagreement_score":0.2924438,"about_ca_system_score_codex":0.00032200437,"about_ca_system_score_gemma":0.00003084226,"threshold_uncertainty_score":0.60381633},"labels":[],"label_agreement":null},{"id":"W2110287688","doi":"10.1016/j.suc.2006.05.006","title":"Laparoscopic Colon Surgery: Past, Present and Future","year":2006,"lang":"en","type":"review","venue":"Surgical Clinics of North America","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":100,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital","funders":"","keywords":"Medicine; Albendazole; Cyst; Echinococcosis; Abdominal ultrasonography; Surgery; Echinococcus granulosus; Abdominal pain; Radiology; Magnetic resonance imaging; Kidney; Ultrasonography; Internal medicine","score_opus":0.03628812458854356,"score_gpt":0.36147783051833554,"score_spread":0.32518970592979196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110287688","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011230789,0.99433243,0.0000021263984,0.00016341904,0.0004196442,0.0007522996,0.00019338161,0.00004493828,0.0029687036],"genre_scores_gemma":[0.00012516826,0.995609,0.00012026118,0.000029770825,0.0021244676,0.000078307865,0.0010011022,0.000045865523,0.000866075],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997711,0.00016064839,0.0010449548,0.00046935954,0.00029442678,0.00031960916],"domain_scores_gemma":[0.9974608,0.0010641566,0.0006813639,0.00045595513,0.000111123954,0.0002266013],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001396133,0.00040402033,0.0031948215,0.00017852522,0.00007369629,0.000010806555,0.000073575604,0.00030201356,0.000121361416],"category_scores_gemma":[0.000025848327,0.00027867695,0.0008585113,0.0005097632,0.00027976529,0.000028603536,0.00008093217,0.0004659039,0.0000494708],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036174428,0.00046865863,0.021712014,0.0037682962,0.00033613466,0.00025124408,0.000002691049,2.2694059e-7,1.9221921e-10,0.00000573831,0.005653076,0.96776575],"study_design_scores_gemma":[0.000540473,0.00036813694,0.0028088011,0.0012255308,0.0014904668,0.00012456127,0.0000022683678,0.0000017642523,1.3426758e-8,0.00000505561,0.9932376,0.00019532586],"about_ca_topic_score_codex":0.000106860745,"about_ca_topic_score_gemma":0.000007566297,"teacher_disagreement_score":0.98758453,"about_ca_system_score_codex":0.0000509867,"about_ca_system_score_gemma":0.00033307885,"threshold_uncertainty_score":0.99996656},"labels":[],"label_agreement":null},{"id":"W2114151069","doi":"10.1128/jcm.41.1.237-241.2003","title":"Detection and Differentiation of <i>Entamoeba histolytica</i> and <i>Entamoeba dispar</i> Isolates in Clinical Samples by PCR and Enzyme-Linked Immunosorbent Assay","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":146,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec","funders":"London School of Hygiene and Tropical Medicine","keywords":"Dispar; Entamoeba histolytica; Biology; Context (archaeology); Microbiology; Polymerase chain reaction; Entamoeba; Virology; Gene; Genetics","score_opus":0.027386023191200995,"score_gpt":0.3270288591462209,"score_spread":0.2996428359550199,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114151069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99422526,0.0035074411,0.0010623666,0.0003279111,0.0005693497,0.00021804923,0.00001754429,0.0000055740443,0.000066527646],"genre_scores_gemma":[0.9932968,0.0056133945,0.00065945747,0.00026272703,0.00007890393,0.0000025135428,0.00001285521,0.00001359915,0.00005977163],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996888,0.000612025,0.0019791813,0.00026898488,0.000052234707,0.00019959135],"domain_scores_gemma":[0.99724656,0.001413483,0.0009061372,0.0001379081,0.00013325685,0.00016265736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016084758,0.00017927287,0.0010048501,0.00013090986,0.000057483343,0.00001114078,0.000043031505,0.00034938383,0.000030701132],"category_scores_gemma":[0.0011969768,0.00013164007,0.00018838591,0.000088899,0.0004393564,0.00008614621,0.00004226195,0.000563176,0.0000013149036],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008325223,0.0012178307,0.91352963,0.000046611647,0.00034220947,0.000009945198,0.000044801873,3.8466834e-7,0.06959229,0.00008134284,0.0002933719,0.014009084],"study_design_scores_gemma":[0.016235804,0.0056023477,0.95202786,0.00026446496,0.00081302534,0.0018130897,0.00015151013,0.00008029484,0.0071124937,0.0005802954,0.015072913,0.0002459052],"about_ca_topic_score_codex":0.000037682345,"about_ca_topic_score_gemma":0.000050206003,"teacher_disagreement_score":0.062479794,"about_ca_system_score_codex":0.00004460439,"about_ca_system_score_gemma":0.00006763708,"threshold_uncertainty_score":0.53681266},"labels":[],"label_agreement":null},{"id":"W2118283102","doi":"10.1128/iai.00759-10","title":"Nod1 and Nod2 Regulation of Inflammation in the <i>Salmonella</i> Colitis Model","year":2010,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":122,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto","funders":"Canadian Institutes of Health Research; Crohn's and Colitis Foundation of Canada; Crohn's and Colitis Foundation; Howard Hughes Medical Institute","keywords":"NOD1; NOD2; Colitis; Inflammation; Salmonella; Biology; Immunology; Microbiology; Immune system; Innate immune system; Bacteria; Genetics","score_opus":0.012133740819509171,"score_gpt":0.2600967592577136,"score_spread":0.24796301843820442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118283102","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931292,0.000014796073,0.00019997962,0.00014955612,0.00005494643,0.00020292851,0.0000016246626,0.000013151413,0.006233833],"genre_scores_gemma":[0.9996605,0.000085131695,0.00008488742,0.000038112514,0.000023205876,0.000013470953,0.0000120861105,0.0000037014856,0.0000788879],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996523,0.000040323874,0.00013063154,0.000059633825,0.000061107494,0.000055950182],"domain_scores_gemma":[0.9997108,0.00003138384,0.000051513023,0.0001291897,0.00005764289,0.0000194895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000225926,0.000054268006,0.00008673363,0.00007918192,0.00010420226,0.000010847085,0.000010915441,0.00006494435,0.00001674489],"category_scores_gemma":[0.000048958063,0.000039338673,0.000018448252,0.00011443465,0.00007064317,0.00010185304,0.00001209218,0.00017868259,0.0000017861244],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018239784,0.00044218617,0.7693038,0.00012782661,0.000049354585,0.0000016678434,0.0025507752,0.00010890641,0.18491966,0.0068489113,0.00006482528,0.0353997],"study_design_scores_gemma":[0.00085882575,0.00008670965,0.98323876,0.00002165439,0.000029298037,0.00008494672,0.000054592045,0.0072715157,0.0070179156,0.0010161975,0.00028192022,0.000037674818],"about_ca_topic_score_codex":0.0013296021,"about_ca_topic_score_gemma":0.00048655632,"teacher_disagreement_score":0.21393496,"about_ca_system_score_codex":0.000011511979,"about_ca_system_score_gemma":0.00001776967,"threshold_uncertainty_score":0.20099695},"labels":[],"label_agreement":null},{"id":"W2122881156","doi":"10.1111/hdi.12185","title":"Pyogenic liver abscess in end‐stage renal disease patients: A nationwide longitudinal study","year":2014,"lang":"en","type":"article","venue":"Hemodialysis International","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; End stage renal disease; Cohort; Internal medicine; Hazard ratio; Hemodialysis; Incidence (geometry); Diabetes mellitus; Rate ratio; Dialysis; Peritoneal dialysis; Cohort study; Surgery; Mortality rate; Confidence interval; Endocrinology","score_opus":0.0185382633323485,"score_gpt":0.29171086760950005,"score_spread":0.27317260427715157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122881156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917964,0.000015039665,0.0015276077,0.00015555864,0.0002808081,0.00036087958,0.000036019203,0.000038253922,0.0057894853],"genre_scores_gemma":[0.9968497,0.000008706743,0.0002599688,0.00015425436,0.00022613457,0.00011493576,0.00030804318,0.000016578015,0.002061669],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99850625,0.00007167858,0.00033339616,0.00035440372,0.00056392833,0.00017037493],"domain_scores_gemma":[0.9991682,0.00008170544,0.000108646906,0.00024726603,0.0002645641,0.00012958258],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020676297,0.0001545777,0.00021841191,0.00041857152,0.00008062243,0.00003697518,0.00011269177,0.000040020102,0.0020145902],"category_scores_gemma":[0.00027127855,0.00013641358,0.000150808,0.00024079089,0.000040316205,0.00016374134,0.000061878,0.00012741891,0.00018086919],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022130809,0.0028197018,0.99230474,0.0000067902392,0.00030021646,0.000071761446,0.00016001337,0.00016190163,0.00000781029,0.00047118196,0.000109797504,0.0033647744],"study_design_scores_gemma":[0.0041227452,0.00013615494,0.988354,0.000024283845,0.000194143,0.0000037018951,0.000030870044,0.005269544,0.000026152853,0.00010292778,0.0016185388,0.000116894706],"about_ca_topic_score_codex":0.0003031474,"about_ca_topic_score_gemma":0.00041560625,"teacher_disagreement_score":0.005107642,"about_ca_system_score_codex":0.00026385285,"about_ca_system_score_gemma":0.00006436271,"threshold_uncertainty_score":0.99889773},"labels":[],"label_agreement":null},{"id":"W2124479660","doi":"10.1503/cmaj.091210","title":"An unusual presentation of amebic liver abscesses","year":2010,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Presentation (obstetrics); Jaundice; Diarrhea; Abdominal pain; Medicine; General surgery; Quadrant (abdomen); Case presentation; Surgery; Internal medicine","score_opus":0.0065365870088228036,"score_gpt":0.2789938891131431,"score_spread":0.2724573021043203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124479660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99128926,0.000028911973,0.00009843762,0.0023787352,0.0006818071,0.00008466748,0.00001226748,0.000010948311,0.0054149814],"genre_scores_gemma":[0.99741733,0.00004275578,0.00028195535,0.000859335,0.0009379159,0.000002958496,0.000018833502,0.000008722864,0.00043018072],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99874127,0.000052040126,0.00024549154,0.00008308738,0.00067434425,0.00020376884],"domain_scores_gemma":[0.99823177,0.00006624121,0.00015423795,0.00008655782,0.0004535895,0.001007634],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00049029815,0.00006565366,0.00014147369,0.00017844992,0.00014100631,0.00002535441,0.000064244035,0.00023751709,0.00524024],"category_scores_gemma":[0.0007334135,0.00005494207,0.0000614043,0.00015991562,0.000041530995,0.0001411207,0.0000033859171,0.00058646896,0.00007399732],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017863586,0.00026387235,0.91905576,0.000015809195,0.00022148572,0.00045277257,0.00040888492,0.0000022692195,0.0006199936,0.00068789686,0.014596624,0.063656755],"study_design_scores_gemma":[0.002053893,0.0003502121,0.93823177,0.000050090497,0.00013645143,0.0012876043,0.00037690919,0.0006522585,0.000870511,0.00021562356,0.055656873,0.00011781653],"about_ca_topic_score_codex":0.005942987,"about_ca_topic_score_gemma":0.037863202,"teacher_disagreement_score":0.06353894,"about_ca_system_score_codex":0.00022326593,"about_ca_system_score_gemma":0.001891646,"threshold_uncertainty_score":0.9956691},"labels":[],"label_agreement":null},{"id":"W2125633042","doi":"10.1128/iai.68.7.4217-4224.2000","title":"The Most Abundant Glycoprotein of Amebic Cyst Walls (Jacob) Is a Lectin with Five Cys-Rich, Chitin-Binding Domains","year":2000,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; York University; National Institutes of Health; Harvard University","keywords":"Chitin; Lectin; Biology; Concanavalin A; Glycoprotein; Biochemistry; Mucin; Entamoeba histolytica; Microbiology","score_opus":0.007080679632247217,"score_gpt":0.24557591582908508,"score_spread":0.23849523619683788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125633042","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98341596,0.00011447736,0.00007086197,0.00019285297,0.00008548569,0.0004844129,0.000016216269,0.000056977766,0.015562733],"genre_scores_gemma":[0.9930344,0.00052680174,0.000079258985,0.00011306172,0.000042114036,0.00004298282,0.000016593292,0.000017676239,0.0061271177],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991193,0.00009796996,0.00023810062,0.00016251732,0.00015974115,0.00022236328],"domain_scores_gemma":[0.9993017,0.00009699918,0.00011571227,0.0003014952,0.00010763533,0.00007651198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001694222,0.00017039277,0.00023247764,0.00010160565,0.0008880153,0.000041268,0.000038419777,0.000079012265,0.00058440794],"category_scores_gemma":[0.000041067182,0.00010576551,0.00006619462,0.0004408158,0.0002101354,0.000099249446,0.000023196048,0.00031709805,0.000049189017],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039263777,0.0038473476,0.48824638,0.0002966761,0.0028053676,0.00013934264,0.011890601,0.000069916685,0.022817327,0.0007856409,0.0012681846,0.46390685],"study_design_scores_gemma":[0.0109204,0.005946323,0.9027134,0.0006284008,0.0005307947,0.002731569,0.0013180701,0.0003813535,0.030664153,0.0003093988,0.043291368,0.0005647416],"about_ca_topic_score_codex":0.0077505508,"about_ca_topic_score_gemma":0.0005490886,"teacher_disagreement_score":0.4633421,"about_ca_system_score_codex":0.00010203838,"about_ca_system_score_gemma":0.000083254985,"threshold_uncertainty_score":0.9988569},"labels":[],"label_agreement":null},{"id":"W2126024417","doi":"10.1139/w01-136","title":"Early interactions of<i>Entamoeba histolytica</i>trophozoites with parenchymal and inflammatory cells in the hamster liver: an immunocytochemical study","year":2002,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Biology; Entamoeba histolytica; Microbiology; Cell adhesion molecule; Hamster; Phagocytosis; Secretion; Cytotoxicity; Cell biology; Molecular biology; In vitro; Biochemistry","score_opus":0.013125942943506497,"score_gpt":0.21682139281621687,"score_spread":0.20369544987271038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126024417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988414,0.00048649492,0.000007835224,0.00009766093,0.00008693728,0.00019185904,0.000013861561,0.0000013760189,0.00027254608],"genre_scores_gemma":[0.99962765,0.000016095806,0.00011896166,0.00011344395,0.00003449121,0.0000034131033,0.000003942224,0.0000059344416,0.00007606727],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99936676,0.000085643136,0.00026429005,0.00009446582,0.000029898807,0.00015893171],"domain_scores_gemma":[0.9994576,0.000055285436,0.0001227209,0.00014022349,0.00008891918,0.00013523892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010710638,0.00009169621,0.0002491194,0.0003089506,0.000056824843,0.000009935434,0.000076005585,0.000048003687,0.00018140391],"category_scores_gemma":[0.000010831933,0.000057177665,0.000051498497,0.00013976118,0.00019832485,0.000065789936,0.0000061248525,0.00025455735,0.000004723471],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015480188,0.00051190984,0.953342,0.00001075915,0.0006829352,0.0014286786,0.007657409,0.0000070935466,0.035185155,0.000023324683,0.00047989428,0.00051604107],"study_design_scores_gemma":[0.0054644705,0.007285181,0.9611631,0.00010614233,0.0014069816,0.0118984375,0.0042692125,0.000027180822,0.002834492,0.000010956451,0.0053195,0.00021436748],"about_ca_topic_score_codex":0.0027648932,"about_ca_topic_score_gemma":0.013781625,"teacher_disagreement_score":0.032350663,"about_ca_system_score_codex":0.0001162615,"about_ca_system_score_gemma":0.00013148271,"threshold_uncertainty_score":0.769047},"labels":[],"label_agreement":null},{"id":"W2129583258","doi":"10.1139/o2012-008","title":"Oral lactoferrin treatment resolves amoebic intracecal infection in C3H/HeJ mice<sup>1</sup>This article is part of a Special Issue entitled Lactoferrin and has undergone the Journal’s usual peer review process.","year":2012,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Lactoferrin; Cecum; Mucus; Microbiology; Entamoeba histolytica; Biology; Ileum; Cytokine; Immunology; Endocrinology; Biochemistry","score_opus":0.029594531858319832,"score_gpt":0.30283884679054934,"score_spread":0.2732443149322295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129583258","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98696387,0.008261659,0.000005457916,0.001313339,0.0000864701,0.00024987187,0.000016252608,0.0000098315895,0.0030932704],"genre_scores_gemma":[0.98495656,0.009936895,0.000030290834,0.00016558915,0.0006766393,0.000021710284,0.000039172282,0.000009810275,0.0041633393],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999025,0.000098218174,0.00031722736,0.0001846212,0.0001056476,0.00026927626],"domain_scores_gemma":[0.9994425,0.000059783786,0.00012768026,0.00014193483,0.00009773472,0.00013037794],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00035429857,0.00018196173,0.00033809594,0.000042699354,0.00012394029,0.000012966341,0.000034595127,0.00018357612,0.0018993675],"category_scores_gemma":[0.00009026794,0.00011507514,0.00006369201,0.00012812323,0.00023443461,0.0000609457,0.00003066409,0.00020271447,0.000020266667],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012441159,0.0046198675,0.85605896,0.0019009275,0.00068244134,0.000037001897,0.0054425816,0.0000041098897,0.07657302,0.00004639639,0.026178997,0.027211586],"study_design_scores_gemma":[0.008001857,0.002180516,0.035382293,0.0008699185,0.001333895,0.001035986,0.0013433297,0.00017175873,0.6379074,0.00014765291,0.31110358,0.00052180106],"about_ca_topic_score_codex":0.00024560458,"about_ca_topic_score_gemma":0.000034684417,"teacher_disagreement_score":0.8206767,"about_ca_system_score_codex":0.000086755645,"about_ca_system_score_gemma":0.00008959602,"threshold_uncertainty_score":0.999013},"labels":[],"label_agreement":null},{"id":"W2133253501","doi":"10.1128/iai.00725-07","title":"Intranasal Immunization with Gal-Inhibitable Lectin plus an Adjuvant of CpG Oligodeoxynucleotides Protects against <i>Entamoeba histolytica</i> Challenge","year":2007,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"University of Virginia","keywords":"Biology; Adjuvant; Immune system; Entamoeba histolytica; CpG Oligodeoxynucleotide; Immunology; Lectin; Antigen; Virology; Microbiology; C-type lectin; Antibody; Immunization; DNA methylation","score_opus":0.01391777879917864,"score_gpt":0.262549175708894,"score_spread":0.2486313969097154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133253501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9779841,0.00018385868,0.007144708,0.00006852256,0.00014471773,0.0006568096,0.0000031761654,0.00013096424,0.013683184],"genre_scores_gemma":[0.9987996,0.00031929798,0.00040568944,0.00008333137,0.000052828276,0.000027867352,0.000055690252,0.00003152842,0.00022413942],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989217,0.000088167675,0.00033285868,0.00020954336,0.00018097316,0.00026673963],"domain_scores_gemma":[0.9990413,0.000045094574,0.00016407641,0.00034483845,0.00026263134,0.00014206044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042525912,0.00020562006,0.00033790286,0.00025057778,0.00037003937,0.000020241736,0.00003622698,0.00012730768,0.00007904994],"category_scores_gemma":[0.000057173136,0.00016846728,0.000058201684,0.0003914456,0.00018137594,0.00029999818,0.000033094828,0.00035440337,0.0000065251156],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010210019,0.01786719,0.4898328,0.002157872,0.002339647,0.0002787955,0.011820944,0.0009957238,0.18277742,0.006600756,0.00048045925,0.27463838],"study_design_scores_gemma":[0.01654347,0.011737465,0.7539559,0.00091808796,0.0005806278,0.0008449126,0.0017604508,0.0021784857,0.20542088,0.00033721712,0.0048280237,0.00089446566],"about_ca_topic_score_codex":0.0030257488,"about_ca_topic_score_gemma":0.0009705372,"teacher_disagreement_score":0.27374393,"about_ca_system_score_codex":0.00023481634,"about_ca_system_score_gemma":0.000113613525,"threshold_uncertainty_score":0.68698967},"labels":[],"label_agreement":null},{"id":"W2134782096","doi":"10.1128/iai.00699-10","title":"<i>Entamoeba histolytica</i> Infection and Secreted Proteins Proteolytically Damage Enteric Neurons","year":2010,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Queen's University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research","keywords":"Biology; Entamoeba histolytica; Enteric nervous system; Microbiology; Protease; Axon; Secretion; Mucus; Cysteine protease; Population; Cell biology; Biochemistry; Enzyme; Endocrinology","score_opus":0.010297718219493435,"score_gpt":0.2565030876427873,"score_spread":0.24620536942329385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134782096","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98787916,0.000016317275,0.0008133254,0.00028898744,0.00041829477,0.0009797043,0.000005558819,0.00020305881,0.009395618],"genre_scores_gemma":[0.9983184,0.00011607636,0.00029218945,0.00024055508,0.00008691488,0.00011539384,0.000030882155,0.000023789835,0.0007758392],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990847,0.00008699355,0.00023238026,0.00025121408,0.00012361031,0.00022111242],"domain_scores_gemma":[0.9992384,0.000039189683,0.00008516411,0.00031854887,0.00012099286,0.00019773364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018405002,0.00020520686,0.00023149635,0.00018208355,0.00048298846,0.0000626371,0.000023175253,0.00015963304,0.00029357424],"category_scores_gemma":[0.00019574293,0.00017791177,0.00007061004,0.00024354515,0.00024557568,0.00022806827,0.00007693837,0.0007215514,0.00003590875],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001952996,0.0010787429,0.8714151,0.00015659288,0.00014448237,0.00002313881,0.00022844106,5.475729e-7,0.10948371,0.00089156814,0.0001747437,0.01620768],"study_design_scores_gemma":[0.002115865,0.0010769077,0.97319293,0.000047284233,0.00017301178,0.0008086535,0.000012544466,0.0005592006,0.0039343038,0.0001747201,0.017717272,0.00018729783],"about_ca_topic_score_codex":0.0025266095,"about_ca_topic_score_gemma":0.000351752,"teacher_disagreement_score":0.10554941,"about_ca_system_score_codex":0.00006062964,"about_ca_system_score_gemma":0.00006279589,"threshold_uncertainty_score":0.7255032},"labels":[],"label_agreement":null},{"id":"W2135570308","doi":"10.1503/cmaj.101510","title":"Persistent epigastric pain in an 80-year-old man","year":2011,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Epigastric pain; Chills; Medicine; Vomiting; Presentation (obstetrics); Chest pain; Exertional dyspnea; Surgery; Nausea; General surgery","score_opus":0.015587961586550457,"score_gpt":0.23298890461944854,"score_spread":0.2174009430328981,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135570308","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.979041,0.00005815824,0.000050620725,0.004420757,0.00042986372,0.00013486743,0.000007639969,0.000016092687,0.015841031],"genre_scores_gemma":[0.994196,0.00003176632,0.00027552329,0.0039597866,0.0005192703,0.000006648662,0.000012609555,0.000012308626,0.0009860612],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984433,0.00018439296,0.0002802533,0.00012295751,0.0005750125,0.00039409826],"domain_scores_gemma":[0.997994,0.00003635428,0.00009560572,0.00009355235,0.0001707105,0.0016097664],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015629973,0.00009064177,0.00017256837,0.00031321752,0.0001456094,0.000022917115,0.000073273426,0.00024212942,0.008036113],"category_scores_gemma":[0.00072589086,0.00007854392,0.000110028675,0.00025022723,0.000021552045,0.000099754034,0.0000054341517,0.0006180944,0.00017034626],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010655543,0.00015263194,0.96154207,0.000003132963,0.00008675493,0.0010369185,0.00041931047,4.6477942e-7,9.2561737e-7,0.000110686364,0.008102861,0.028533606],"study_design_scores_gemma":[0.0023529876,0.000778991,0.967161,0.000091910995,0.00007373347,0.0006918491,0.001402728,0.00031153683,0.0000035693322,0.0001416601,0.026862394,0.0001276193],"about_ca_topic_score_codex":0.0072422693,"about_ca_topic_score_gemma":0.034085125,"teacher_disagreement_score":0.028405987,"about_ca_system_score_codex":0.00166047,"about_ca_system_score_gemma":0.0011760723,"threshold_uncertainty_score":0.9993686},"labels":[],"label_agreement":null},{"id":"W2137051671","doi":"10.1073/pnas.0600623103","title":"<i>Entamoeba histolytica</i> cysteine proteases cleave the MUC2 mucin in its C-terminal domain and dissolve the protective colonic mucus gel","year":2006,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":258,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; McGill University","funders":"","keywords":"Proteases; Mucin; Mucus; Cysteine protease; Cysteine; Entamoeba histolytica; Biochemistry; Protease; Biology; Microbiology; Chemistry; Enzyme","score_opus":0.020591331933882965,"score_gpt":0.2892511353387306,"score_spread":0.26865980340484763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137051671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981637,0.00035560198,8.9356246e-7,0.012224256,0.000012794555,0.0013920419,0.000014750657,0.000008727612,0.004353938],"genre_scores_gemma":[0.9989726,0.000011967808,0.00018363816,0.00023202381,0.00007900296,0.00016983971,2.5366813e-7,0.000004948151,0.00034575135],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985328,0.000016550151,0.00030630972,0.0002340017,0.000729327,0.00018104956],"domain_scores_gemma":[0.99928945,0.00015260286,0.00032088364,0.000015422162,0.00019479942,0.00002686843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000986027,0.000119042066,0.0001786159,0.00011595334,0.00038595893,0.000021260736,0.00026753935,0.00006492179,0.000008939639],"category_scores_gemma":[0.0002936224,0.000053319927,0.000068333364,0.0006430216,0.0012349968,0.00019737153,0.00010642389,0.00023992667,0.0000013112873],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00127283,0.002921084,0.28711927,0.00075592176,0.0002993763,0.0000025221245,0.003995888,0.000098387995,0.3775522,0.31878218,0.004049743,0.003150565],"study_design_scores_gemma":[0.0020423557,0.00082099857,0.8251045,0.00049661443,0.00014925911,0.0004519945,0.0012167977,0.0012736638,0.104247555,0.06312589,0.000892492,0.00017791412],"about_ca_topic_score_codex":0.00012576305,"about_ca_topic_score_gemma":0.000003843932,"teacher_disagreement_score":0.53798515,"about_ca_system_score_codex":0.00012419047,"about_ca_system_score_gemma":0.00006860575,"threshold_uncertainty_score":0.45503974},"labels":[],"label_agreement":null},{"id":"W2138473556","doi":"10.1128/iai.71.2.838-844.2003","title":"<i>Entamoeba histolytica</i> Cysteine Proteinases Disrupt the Polymeric Structure of Colonic Mucin and Alter Its Protective Function","year":2003,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":120,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Mucin; Entamoeba histolytica; Cysteine; Cysteine protease; Biology; Mucus; Biochemistry; Intestinal mucosa; Microbiology; Intestinal epithelium; Molecular biology; Epithelium; Enzyme","score_opus":0.00902133389270602,"score_gpt":0.24507261049195184,"score_spread":0.23605127659924582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138473556","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99641764,0.0007871019,0.00019241183,0.000107403466,0.00014277984,0.0010127658,0.000009566664,0.00003283556,0.0012975186],"genre_scores_gemma":[0.9993814,0.00008703578,0.000016559934,0.00009950081,0.000024905828,0.000057207744,0.000009249582,0.000011360585,0.00031274933],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99929684,0.00015832961,0.00017493946,0.00014632006,0.000096375,0.00012719922],"domain_scores_gemma":[0.99948525,0.00004617166,0.000113393304,0.00019514209,0.00010573661,0.000054301076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009527666,0.00013939611,0.00019601014,0.00008296018,0.00034386225,0.000014129339,0.000015490516,0.00007647333,0.0001254145],"category_scores_gemma":[0.00011880086,0.000090041,0.00004779131,0.0002338787,0.00015835119,0.0001067562,0.000022657146,0.00023817211,0.0000033172607],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023240498,0.002485879,0.3230542,0.00095238665,0.0015078896,0.000018760435,0.0023044392,0.000016759135,0.61884403,0.008242797,0.0002748297,0.039973944],"study_design_scores_gemma":[0.005305369,0.006825448,0.76723075,0.00018963125,0.000743273,0.0012920274,0.000434216,0.00012400391,0.20883225,0.0009481528,0.0077704093,0.00030450002],"about_ca_topic_score_codex":0.0010536859,"about_ca_topic_score_gemma":0.000099004545,"teacher_disagreement_score":0.44417652,"about_ca_system_score_codex":0.00006928417,"about_ca_system_score_gemma":0.00005197667,"threshold_uncertainty_score":0.36717653},"labels":[],"label_agreement":null},{"id":"W2144451271","doi":"10.1139/w08-106","title":"Innate immunity prevents tissue invasion by<i>Entamoeba histolytica</i>","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Entamoeba histolytica; Innate immune system; Biology; Immunity; Microbiology; Entamoeba; Virology; Immunology; Immune system","score_opus":0.014629571034181133,"score_gpt":0.23473318504123028,"score_spread":0.22010361400704914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144451271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954432,0.0013841335,0.00005098419,0.0007277762,0.0004841155,0.00012389847,0.000042967178,0.000004769952,0.00173814],"genre_scores_gemma":[0.995252,0.00011475367,0.00028447685,0.0006442912,0.00006696373,8.611123e-7,0.000055151366,0.000013263477,0.0035682244],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992223,0.00007659258,0.00030817822,0.00009591164,0.00003179318,0.0002652645],"domain_scores_gemma":[0.99912286,0.000024905254,0.00015998574,0.0001534182,0.00013000598,0.0004088006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012521697,0.00011416177,0.00028932956,0.00021675984,0.00019785704,0.000003548938,0.00009592618,0.00012930286,0.00059759367],"category_scores_gemma":[0.00006424891,0.00009399519,0.00008592263,0.00011229676,0.00020519848,0.00005134233,0.000010755684,0.00028845997,0.00009315944],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014394878,0.00038344483,0.19944823,0.000033888857,0.0005625636,0.003740337,0.00090709736,0.0000023936354,0.44656572,0.000054407243,0.34310865,0.005049328],"study_design_scores_gemma":[0.004268304,0.0016352702,0.020079933,0.00017006061,0.00024216207,0.055063196,0.00010609032,0.0000010982277,0.06906805,0.0000791558,0.84903526,0.00025141664],"about_ca_topic_score_codex":0.004676442,"about_ca_topic_score_gemma":0.0030447992,"teacher_disagreement_score":0.5059266,"about_ca_system_score_codex":0.00039697767,"about_ca_system_score_gemma":0.0010200252,"threshold_uncertainty_score":0.7069413},"labels":[],"label_agreement":null},{"id":"W2145043941","doi":"10.1093/cid/cir690","title":"Multiloculated Liver Abscess Due to Hypermucoviscous Klebsiella pneumoniae","year":2011,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Klebsiella pneumoniae; Medicine; Liver abscess; Klebsiella infections; Pyogenic liver abscess; Microbiology; Hepatic abscess; Abscess; Klebsiella; Surgery; Escherichia coli; Biology","score_opus":0.07103417891378581,"score_gpt":0.3598466692866935,"score_spread":0.2888124903729077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145043941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97815067,0.00018790273,0.00039485146,0.00007317481,0.00073176273,0.00069130096,0.000035606085,0.00043413983,0.019300602],"genre_scores_gemma":[0.9968351,0.00010909985,0.00008004828,0.0014174834,0.00031591146,0.000091026974,0.000029071129,0.000047611244,0.0010746231],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982875,0.00009995109,0.0005380062,0.00051900744,0.00018736412,0.00036817955],"domain_scores_gemma":[0.9981636,0.00021968363,0.00010688031,0.00053222553,0.00021686024,0.00076075474],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00012591474,0.0002610715,0.0005552254,0.00015038147,0.0001822813,0.000024972056,0.00008895508,0.00018231173,0.0013219587],"category_scores_gemma":[0.00053542486,0.0002106484,0.00039784116,0.00031849457,0.00017855786,0.0000910952,0.00008940689,0.00024197885,0.0023722947],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014658773,0.0047099576,0.97043204,0.000044995224,0.00041969714,0.0013105981,0.00010875989,0.000008465294,0.000030385587,0.00012455056,0.0014128579,0.021251122],"study_design_scores_gemma":[0.002213096,0.0012880613,0.9924549,0.00007717372,0.00063257595,0.00012721302,0.000022701071,0.00019387557,0.00008640221,0.0002521772,0.0024010004,0.00025081186],"about_ca_topic_score_codex":0.0003160521,"about_ca_topic_score_gemma":0.000053205495,"teacher_disagreement_score":0.022022888,"about_ca_system_score_codex":0.00008540016,"about_ca_system_score_gemma":0.00013370019,"threshold_uncertainty_score":0.999591},"labels":[],"label_agreement":null},{"id":"W2145979689","doi":"10.1016/s0188-4409(00)00227-7","title":"Entamoeba histolytica Cysteine Proteinases Degrade Human Colonic Mucin and Alter Its Function","year":2000,"lang":"en","type":"article","venue":"Archives of Medical Research","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Medical Research Council","keywords":"Entamoeba histolytica; Mucin; Entamoeba; Microbiology; Cysteine; Function (biology); Chemistry; Biology; Biochemistry; Enzyme; Cell biology","score_opus":0.05403413562170917,"score_gpt":0.4020517913056225,"score_spread":0.34801765568391335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145979689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9680947,0.0011162849,0.000035045538,0.0031739941,0.00002490635,0.00070232124,0.0000058534683,0.000030125102,0.026816765],"genre_scores_gemma":[0.9885185,0.0008198819,0.00014327433,0.000084571984,0.00012893023,0.0001055556,0.000029882987,0.000017476506,0.0101519795],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.997556,0.00021355691,0.00028418584,0.00030397522,0.001234995,0.0004073372],"domain_scores_gemma":[0.9987025,0.0004900572,0.000030636398,0.00026740754,0.00006390993,0.0004454449],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00054257445,0.000118543954,0.00027115035,0.00027381652,0.00024050711,0.000012335443,0.00011985698,0.0001003939,0.0046648565],"category_scores_gemma":[0.00053026626,0.000088264154,0.00007346896,0.00021284161,0.00073388865,0.000052641895,0.00009406841,0.0005300016,0.00008208869],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003414207,0.0040572817,0.02618462,0.0011186788,0.00066209945,0.0008648301,0.0013675417,9.388473e-7,0.041186817,0.01380021,0.0045028916,0.9028399],"study_design_scores_gemma":[0.034377795,0.048207298,0.5043275,0.005364908,0.0006751675,0.0015910949,0.0006937685,0.0054062097,0.053563755,0.0109726405,0.33391485,0.0009050625],"about_ca_topic_score_codex":0.00052056287,"about_ca_topic_score_gemma":0.00005966611,"teacher_disagreement_score":0.9019348,"about_ca_system_score_codex":0.000046684574,"about_ca_system_score_gemma":0.00023258681,"threshold_uncertainty_score":0.996245},"labels":[],"label_agreement":null},{"id":"W2148973276","doi":"10.5811/westjem.2012.10.13268","title":"Hepatic Abscess: Case Report and Review","year":2013,"lang":"en","type":"article","venue":"Western Journal of Emergency Medicine","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Medicine; Emergency department; Etiology; Abscess; Pneumonia; Liver abscess; Emergency physician; Differential diagnosis; Surgery; General surgery; Radiology; Intensive care medicine; Internal medicine; Pathology","score_opus":0.04766419855901753,"score_gpt":0.3687575590175739,"score_spread":0.32109336045855635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148973276","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9420767,0.04564341,0.00024755654,0.006058532,0.0013342359,0.00038439184,6.002864e-7,0.00001103951,0.004243545],"genre_scores_gemma":[0.9542164,0.03957868,0.00019308513,0.00048677545,0.00068551855,0.000012091347,0.0000039947367,0.000018587569,0.0048048203],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99846107,0.000035632536,0.000982763,0.00011437284,0.00026568645,0.00014045864],"domain_scores_gemma":[0.99852127,0.000029331151,0.00051588315,0.00021333605,0.00045590432,0.00026429808],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004091364,0.00013539782,0.0005068942,0.00011801503,0.000054245294,0.00000201229,0.000036738802,0.000036442438,0.005325885],"category_scores_gemma":[0.00034137006,0.00007903612,0.00008859494,0.00016201778,0.000052557814,0.00014728868,0.000015800246,0.0001718146,0.00004038678],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037330945,0.00038495107,0.77030164,0.0023771268,0.00069941033,0.14698331,0.00049743726,3.2963635e-7,0.00040868367,0.000015845013,0.0651987,0.013095255],"study_design_scores_gemma":[0.0023340643,0.0017900044,0.11624213,0.006945453,0.0016847148,0.853669,0.00023141687,0.00001411928,0.000027130325,0.00021853458,0.016694551,0.00014889752],"about_ca_topic_score_codex":0.00028383866,"about_ca_topic_score_gemma":0.000017201792,"teacher_disagreement_score":0.70668566,"about_ca_system_score_codex":0.000031902775,"about_ca_system_score_gemma":0.00004953866,"threshold_uncertainty_score":0.99558336},"labels":[],"label_agreement":null},{"id":"W2152624601","doi":"10.1128/iai.01442-06","title":"Induction of Monocyte Chemotactic Protein 1 in Colonic Epithelial Cells by <i>Entamoeba histolytica</i> Is Mediated via the Phosphatidylinositol 3-Kinase/p65 Pathway","year":2007,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canadian Association of Gastroenterology; McGill University","keywords":"Biology; Chemotaxis; Phosphatidylinositol; Entamoeba histolytica; Cell biology; Protein kinase A; Chemokine; Kinase; Monocyte; Signal transduction; Molecular biology; Protein kinase B; Mitogen-activated protein kinase; Inflammation; Biochemistry; Immunology; Receptor","score_opus":0.009771835486804523,"score_gpt":0.2464345016325111,"score_spread":0.23666266614570658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152624601","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99674946,0.00019553135,0.00042778644,0.00021628443,0.00027357484,0.00081966154,0.000015304242,0.00004094169,0.0012614633],"genre_scores_gemma":[0.9991273,0.00017252823,0.000043680706,0.00016760248,0.00003733019,0.00003786812,0.000031727333,0.000015568945,0.00036638422],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989774,0.00009525571,0.0003748678,0.0001728386,0.00016321274,0.00021640693],"domain_scores_gemma":[0.9992618,0.00009756035,0.00019306144,0.00026304094,0.00010666056,0.00007789809],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046459967,0.00016537932,0.00024854642,0.00013873901,0.00021147383,0.000011779083,0.00003904022,0.00016065649,0.00013263957],"category_scores_gemma":[0.00006707424,0.00012500478,0.00007460902,0.00042223735,0.00016194758,0.00013065469,0.0000322973,0.00041607136,0.000029043991],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00092524034,0.0031238005,0.060971774,0.00013758766,0.00024003338,0.000021689886,0.0014383319,0.0000021103785,0.9010802,0.00008095892,0.00047693154,0.031501323],"study_design_scores_gemma":[0.0028657499,0.0007588772,0.0990466,0.00006330098,0.000088768844,0.0000738429,0.00013429127,0.0001532921,0.88906187,0.00008064513,0.0075400993,0.00013264782],"about_ca_topic_score_codex":0.0066716853,"about_ca_topic_score_gemma":0.00021806528,"teacher_disagreement_score":0.038074825,"about_ca_system_score_codex":0.0002657931,"about_ca_system_score_gemma":0.000080836704,"threshold_uncertainty_score":0.99994296},"labels":[],"label_agreement":null},{"id":"W2154078738","doi":"10.1128/iai.74.1.528-536.2006","title":"CpG-Oligodeoxynucleotide Is a Potent Adjuvant with an<i>Entamoeba histolytica</i>Gal-Inhibitable Lectin Vaccine against Amoebic Liver Abscess in Gerbils","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; McGill University; University of Virginia","keywords":"Entamoeba histolytica; CpG Oligodeoxynucleotide; Lectin; Biology; Adjuvant; Microbiology; Immunology; Immunoadjuvant; Virology; Molecular biology; Biochemistry; DNA methylation","score_opus":0.01231824442178423,"score_gpt":0.25531160078955456,"score_spread":0.24299335636777034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154078738","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98961455,0.00037918863,0.00036184143,0.0003938969,0.0001380878,0.0005681225,0.0000067442015,0.0001437786,0.008393821],"genre_scores_gemma":[0.99582255,0.0006336589,0.0003711804,0.0012401952,0.000105927924,0.00007320259,0.00004063604,0.000039817594,0.0016728387],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984984,0.00011473826,0.00039058574,0.00037861857,0.00020757239,0.0004101056],"domain_scores_gemma":[0.99897814,0.000045212328,0.00013276692,0.00045745092,0.00016071608,0.00022569147],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027747484,0.0003087602,0.0004448007,0.0003558864,0.0003713062,0.000055299184,0.000051910305,0.00014114044,0.0004530941],"category_scores_gemma":[0.000039656898,0.00024813242,0.00009028979,0.00047153435,0.0000811046,0.00051269546,0.0000568221,0.000470485,0.000091856906],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016671857,0.00672596,0.8882675,0.0002133753,0.00042722642,0.00021582922,0.0020174244,0.00031893392,0.0043722284,0.00018504892,0.0024956497,0.093093604],"study_design_scores_gemma":[0.008616766,0.0017792524,0.96034974,0.0003184413,0.00027302795,0.000758602,0.00021595665,0.0032563822,0.0070214123,0.000048768583,0.016889082,0.00047257333],"about_ca_topic_score_codex":0.008573193,"about_ca_topic_score_gemma":0.0045637493,"teacher_disagreement_score":0.09262103,"about_ca_system_score_codex":0.0004930808,"about_ca_system_score_gemma":0.00010931964,"threshold_uncertainty_score":0.9999971},"labels":[],"label_agreement":null},{"id":"W2157421338","doi":"10.1139/w10-088","title":"Effect of phosphatidylcholine–cholesterol liposomes on Entamoeba histolytica virulence","year":2010,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Virulence; Entamoeba histolytica; Biology; Microbiology; Axenic; Hamster; In vitro; Cholesterol; In vivo; Phagocytosis; Biochemistry; Molecular biology; Bacteria","score_opus":0.004273173137042765,"score_gpt":0.24130264643988306,"score_spread":0.2370294733028403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157421338","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969027,0.00024922384,0.00000898393,0.0003862325,0.0011152598,0.00014038717,0.000031533207,0.0000031538734,0.0011625056],"genre_scores_gemma":[0.9990081,0.000016877144,0.00013939544,0.00036345623,0.00013409412,0.0000016938436,0.000008657742,0.000011960535,0.00031572985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99927115,0.0000575735,0.0003063884,0.00010637554,0.000034936962,0.0002235753],"domain_scores_gemma":[0.9990221,0.00011994351,0.00020700364,0.000184977,0.00013019564,0.00033578262],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022955902,0.00012592724,0.00036956207,0.0002941907,0.00005897113,0.0000049643654,0.000102945116,0.00014526217,0.00045536787],"category_scores_gemma":[0.00017589313,0.00008953644,0.00014282268,0.00008483111,0.00022700723,0.00003450605,0.000005378394,0.0004019488,0.000053746728],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057781563,0.00020390651,0.25406814,0.000100945384,0.00051279704,0.0006236744,0.00030707577,0.0000057651637,0.7043859,0.00036156076,0.0056589707,0.03319347],"study_design_scores_gemma":[0.008688697,0.014003645,0.054795645,0.00045302924,0.00069072354,0.01423157,0.000033381737,0.0000052922533,0.78921336,0.00004268686,0.117556125,0.0002858727],"about_ca_topic_score_codex":0.0010879659,"about_ca_topic_score_gemma":0.0029453328,"teacher_disagreement_score":0.19927248,"about_ca_system_score_codex":0.00011698741,"about_ca_system_score_gemma":0.00052613555,"threshold_uncertainty_score":0.4985959},"labels":[],"label_agreement":null},{"id":"W2157747644","doi":"10.14740/jmc.v6i8.2238","title":"Pyogenic Liver Abscess Mimicking Liver Neoplasm on Computed Tomography Scan in a Patient With Elevated CA 19-9","year":2015,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Leukocytosis; Liver abscess; Metastasis; Pyogenic liver abscess; Computed tomography; Radiology; Abscess; Tumor marker; Presentation (obstetrics); Lesion; Cancer; Pathology; Internal medicine; Surgery","score_opus":0.02955633341962121,"score_gpt":0.2818952835785707,"score_spread":0.25233895015894947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157747644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977319,0.00084786594,0.00011070612,0.00051152654,0.0002202399,0.00015582779,0.000004427456,0.000012523568,0.00040496464],"genre_scores_gemma":[0.99858916,0.000113057846,0.00037929075,0.0006993812,0.00017081061,0.0000035558205,0.000007095938,0.000014225364,0.000023397824],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980773,0.000083110106,0.00039491666,0.0001296524,0.001100724,0.0002143429],"domain_scores_gemma":[0.998605,0.00018858562,0.00022287267,0.000115701805,0.00026189917,0.00060594064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002742763,0.00014526428,0.0003525996,0.00039525284,0.00004617742,0.000015035282,0.00007617809,0.00011531795,0.00024185858],"category_scores_gemma":[0.0003209114,0.00008872802,0.000108277774,0.0004029128,0.00009651534,0.000070597,0.000025425048,0.00043931016,0.000014415758],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007176729,0.008617243,0.4651856,0.00022018948,0.0015945736,0.40752563,0.0032949783,0.0005894286,0.00005485634,0.000095206124,0.03158638,0.074059196],"study_design_scores_gemma":[0.07391423,0.053559415,0.4327069,0.01268016,0.002088031,0.37167603,0.005760487,0.012904733,0.002633049,0.00011885394,0.030700365,0.0012577487],"about_ca_topic_score_codex":0.0009836914,"about_ca_topic_score_gemma":0.0004251196,"teacher_disagreement_score":0.07280145,"about_ca_system_score_codex":0.00021755416,"about_ca_system_score_gemma":0.0005537101,"threshold_uncertainty_score":0.36182237},"labels":[],"label_agreement":null},{"id":"W2159173892","doi":"10.1016/j.ejcts.2010.03.023","title":"Reply to Quiroga et al.","year":2010,"lang":"en","type":"article","venue":"European Journal of Cardio-Thoracic Surgery","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Humanities; Philosophy","score_opus":0.027092308854762912,"score_gpt":0.3159258195649594,"score_spread":0.2888335107101965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159173892","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9321327,0.00020086039,0.0012922969,0.008578948,0.0027186286,0.00011933714,0.0000047831563,0.00004616717,0.054906275],"genre_scores_gemma":[0.9849307,0.00010035228,0.0024003915,0.010787185,0.0007147979,0.0000014287971,0.000004132058,0.000059710506,0.0010012853],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979426,0.0005995535,0.0005894296,0.00018035763,0.00042210086,0.000265958],"domain_scores_gemma":[0.9982319,0.00023337505,0.0002731396,0.00042857532,0.00039069625,0.00044231734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0055894684,0.00016875603,0.0005107348,0.00038655577,0.0000873666,0.00004000367,0.00008260973,0.000022050779,0.00020188432],"category_scores_gemma":[0.00091518654,0.00012904404,0.00058396236,0.00028612584,0.00004813196,0.00015023646,0.000043140408,0.0005511435,0.00040604285],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081355864,0.00038268344,0.15624416,0.000031151827,0.000997384,0.01645984,0.0003963032,0.000034801695,0.0059514535,0.00003739225,0.5055768,0.31307447],"study_design_scores_gemma":[0.00028647794,0.00023873146,0.12007313,0.00013638615,0.00016961327,0.00753719,0.000061607294,0.0000012015613,0.0013943154,0.0000063124326,0.8699669,0.00012811784],"about_ca_topic_score_codex":0.000006562569,"about_ca_topic_score_gemma":7.262341e-7,"teacher_disagreement_score":0.36439013,"about_ca_system_score_codex":0.00004860742,"about_ca_system_score_gemma":0.00018646078,"threshold_uncertainty_score":0.5262263},"labels":[],"label_agreement":null},{"id":"W2163012476","doi":"10.2217/17460913.4.1.105","title":"Recent Discoveries in the Pathogenesis and Immune Response Toward <i>Entamoeba Histolytica</i>","year":2009,"lang":"en","type":"review","venue":"Future Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Entamoeba histolytica; Biology; Amoebiasis; Entamoeba; Immune system; Microbiology; Virology; Immunology","score_opus":0.02178957162639258,"score_gpt":0.29945313171513355,"score_spread":0.277663560088741,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163012476","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00056210154,0.9953678,0.000003818206,0.0018768106,0.0005554586,0.0010038037,0.000158746,0.000022517443,0.0004489161],"genre_scores_gemma":[0.00010745749,0.99755174,0.00012443126,0.000613972,0.00032787523,0.00009912175,0.00068674213,0.000028373344,0.0004602728],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99808645,0.00063884695,0.0004908965,0.0004230898,0.000043765547,0.00031695145],"domain_scores_gemma":[0.99906945,0.00019856977,0.00018082254,0.00047424244,0.000031698302,0.000045190314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038454562,0.00041154574,0.0014169533,0.00018970996,0.00009797649,0.000015785261,0.0001338979,0.00048241823,0.00009134869],"category_scores_gemma":[0.000057313817,0.00021934847,0.00028590887,0.00029624527,0.0002152485,0.000023478267,0.000060838167,0.0004426889,0.000048399033],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003271488,0.00025504566,0.000032614942,0.00092623744,0.00018766141,0.00033398072,0.00026474803,1.0466295e-8,0.00016163879,0.00015484206,0.0022682566,0.9950878],"study_design_scores_gemma":[0.00055797485,0.0004218264,0.0006579692,0.0010860447,0.0008983548,0.004570447,0.00011773654,1.7044268e-8,0.0000032932792,0.000012453337,0.991488,0.00018590598],"about_ca_topic_score_codex":0.000013015129,"about_ca_topic_score_gemma":0.000013384339,"teacher_disagreement_score":0.9949019,"about_ca_system_score_codex":0.00026223756,"about_ca_system_score_gemma":0.0002597742,"threshold_uncertainty_score":0.89447707},"labels":[],"label_agreement":null},{"id":"W2163912335","doi":"10.1093/ndt/15.2.231","title":"Outpatient CAPD catheter salvage for persistent exit-site/tunnel infection","year":2000,"lang":"en","type":"article","venue":"Nephrology Dialysis Transplantation","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital du Sacré-Cœur de Montréal","funders":"American Society of Nephrology","keywords":"Medicine; Exit site; Catheter; Surgery","score_opus":0.014159709803276757,"score_gpt":0.2545599435023846,"score_spread":0.24040023369910785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163912335","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99260527,0.00005697008,0.003315503,0.00038790196,0.0001555242,0.0007045459,0.00007423312,0.00010320645,0.002596833],"genre_scores_gemma":[0.99523,0.0006939066,0.00056505436,0.0008725392,0.00016298766,0.0003134916,0.001313674,0.000023567256,0.00082473643],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99895537,0.00006427947,0.00028318085,0.00032271582,0.00011630365,0.00025813765],"domain_scores_gemma":[0.99950016,0.000070587914,0.0000639175,0.00019462948,0.00008551401,0.00008522083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011018423,0.00017881031,0.0002911912,0.0002959775,0.00021103889,0.0000126873165,0.000025969326,0.00019943008,0.00066165905],"category_scores_gemma":[0.0000068901018,0.00015618929,0.00040693747,0.00023873187,0.00006097995,0.00010877173,0.0000019599877,0.000109407236,0.00018306683],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010729377,0.0070257955,0.8151124,0.0007125076,0.005691028,0.00012965171,0.01711323,0.005697971,0.01594075,0.0005527223,0.0032718098,0.11802278],"study_design_scores_gemma":[0.014307209,0.005343482,0.9375373,0.0000666236,0.010197552,0.00045238074,0.0000655855,0.0027323212,0.0020039612,0.00029287994,0.026489459,0.00051121844],"about_ca_topic_score_codex":0.00047264053,"about_ca_topic_score_gemma":0.0004386756,"teacher_disagreement_score":0.122424945,"about_ca_system_score_codex":0.00008739214,"about_ca_system_score_gemma":0.000029002436,"threshold_uncertainty_score":0.7244703},"labels":[],"label_agreement":null},{"id":"W2165017241","doi":"10.1503/cmaj.092117","title":"Hepatodiaphragmatic interposition of the colon","year":2010,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Supine position; Feeling; Medicine; Medical history; Physical examination; General surgery; Surgery; Position (finance); Psychology","score_opus":0.0027319099651594214,"score_gpt":0.22581226834641877,"score_spread":0.22308035838125934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165017241","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9748255,0.000011839325,0.00002970721,0.012767369,0.0012179585,0.00010054156,0.000006605818,0.0000050716394,0.0110353865],"genre_scores_gemma":[0.9969862,0.0000086230275,0.00007046076,0.0021727502,0.0003645386,0.0000032438904,0.0000024785613,0.000005033334,0.00038664675],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99902284,0.000049377883,0.0002134184,0.000046943274,0.0005173194,0.00015011083],"domain_scores_gemma":[0.9990126,0.000054681368,0.00014475624,0.00008338514,0.000236632,0.00046796395],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00048671165,0.000047844333,0.0001114384,0.000079105885,0.00016248903,0.000013333451,0.00006423093,0.00018712207,0.002881528],"category_scores_gemma":[0.00095107325,0.0000307833,0.00009731889,0.00014514248,0.000037629852,0.00003685681,0.0000066157922,0.00069300266,0.00005328095],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008176434,0.00009977265,0.96211636,0.000011589913,0.0001891482,0.00009585728,0.00023110204,3.3117993e-7,0.0004223859,0.0015433723,0.018992404,0.016289491],"study_design_scores_gemma":[0.0018798356,0.00014837168,0.9270525,0.00019473079,0.00016970272,0.002721317,0.00019413416,0.000372161,0.00062926684,0.000874596,0.065672,0.000091378904],"about_ca_topic_score_codex":0.0015720946,"about_ca_topic_score_gemma":0.023500768,"teacher_disagreement_score":0.0466796,"about_ca_system_score_codex":0.0003319013,"about_ca_system_score_gemma":0.0014596314,"threshold_uncertainty_score":0.99802995},"labels":[],"label_agreement":null},{"id":"W2165738025","doi":"10.1096/fasebj.28.1_supplement.152.5","title":"<i>Entamoeba histolytica</i> induces caspase‐4/11 activation in inflammasome signaling (152.5)","year":2014,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Inflammasome; Entamoeba histolytica; Caspase; Caspase 1; Cell biology; NLRP1; Caspase 8; Caspase 3; Biology; Caspase 2; Caspase 10; Inflammation; Microbiology; Chemistry; Apoptosis; Immunology; Biochemistry; Programmed cell death","score_opus":0.01747619231191,"score_gpt":0.25425609754964007,"score_spread":0.23677990523773007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165738025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99377626,0.000036527523,0.00074004504,0.001340911,0.00021387839,0.00015363899,6.655381e-7,0.000021426871,0.0037166732],"genre_scores_gemma":[0.99835026,0.000012953917,0.00020417271,0.00044258047,0.00047645406,0.000008002818,0.0000059733684,0.000016227477,0.00048338916],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990064,0.00010755234,0.0002848906,0.00011395603,0.00024489145,0.00024234838],"domain_scores_gemma":[0.9993562,0.00013334595,0.00015343515,0.00017550681,0.00006852552,0.00011296882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000489154,0.00012544049,0.00018890439,0.00017196403,0.00026063813,0.000036621757,0.0000778402,0.00006319865,0.00021487399],"category_scores_gemma":[0.00012718436,0.00007845566,0.000083602805,0.00019930836,0.00006109253,0.00016062024,0.000022035198,0.0004224571,0.000055946814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043244727,0.00087025255,0.32439885,0.000050036826,0.0003304708,0.00026278256,0.0028685066,0.00065165485,0.6389671,0.0027632043,0.0012565594,0.027148131],"study_design_scores_gemma":[0.014781703,0.0015731041,0.21901937,0.0011488431,0.0007288173,0.00479487,0.0023613682,0.0020545973,0.7381376,0.0054847295,0.009172017,0.0007429834],"about_ca_topic_score_codex":0.00012538863,"about_ca_topic_score_gemma":0.000028866141,"teacher_disagreement_score":0.10537946,"about_ca_system_score_codex":0.0002623729,"about_ca_system_score_gemma":0.000093287425,"threshold_uncertainty_score":0.3199329},"labels":[],"label_agreement":null},{"id":"W2168219552","doi":"10.1128/iai.00645-08","title":"Prostaglandin E<sub>2</sub>Produced by<i>Entamoeba histolytica</i>Binds to EP4 Receptors and Stimulates Interleukin-8 Production in Human Colonic Cells","year":2008,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Ono Pharmaceutical; Canadian Association of Gastroenterology; University of Calgary","keywords":"Entamoeba histolytica; Biology; Proinflammatory cytokine; Receptor; Prostaglandin E; Chemokine; Interleukin 8; Prostaglandin E2; Mucin; Prostaglandin E2 receptor; Microbiology; Inflammation; Immunology; Endocrinology; Biochemistry; Agonist","score_opus":0.014133163644504702,"score_gpt":0.2581786309421706,"score_spread":0.24404546729766588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168219552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977976,0.00010874925,0.000018432482,0.00045136316,0.0004633153,0.0008380065,0.0000045168517,0.000089012,0.00022898795],"genre_scores_gemma":[0.9986836,0.0003521952,0.000024390145,0.000092998765,0.00006158941,0.00007243715,0.00004110453,0.000022286282,0.0006494214],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989584,0.00010227025,0.00024409244,0.00034537454,0.000115720315,0.00023411443],"domain_scores_gemma":[0.99941283,0.000028987415,0.00007965483,0.00024511598,0.00009514403,0.0001382742],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022245025,0.00020576183,0.0002852666,0.00030249174,0.00044754325,0.00002776971,0.000024932906,0.00011380389,0.00002613408],"category_scores_gemma":[0.00010530531,0.00018860507,0.0000436956,0.00037066644,0.0001518777,0.00018618026,0.000052457992,0.00033191917,0.000016947914],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020662832,0.00086130894,0.39311296,0.0000653975,0.00007201019,0.000011352329,0.0011982333,0.0000076168017,0.59791064,0.000013165319,0.002902758,0.0036379416],"study_design_scores_gemma":[0.0024952446,0.0017050607,0.33488476,0.00012739783,0.00007683813,0.00027548897,0.000103302045,0.00003179852,0.65648764,0.000029225299,0.003524092,0.00025911615],"about_ca_topic_score_codex":0.00097151037,"about_ca_topic_score_gemma":0.000183479,"teacher_disagreement_score":0.058577046,"about_ca_system_score_codex":0.000334565,"about_ca_system_score_gemma":0.00004400422,"threshold_uncertainty_score":0.7691092},"labels":[],"label_agreement":null},{"id":"W2169085095","doi":"10.1136/adc.86.6.439","title":"Pelvic inflammatory disease associated with Enterobius vermicularis","year":2002,"lang":"en","type":"article","venue":"Archives of Disease in Childhood","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"British Columbia Children's Hospital","funders":"Pfizer","keywords":"Medicine; Enterobius; Albendazole; Clearance; Girl; Disease; Pelvic inflammatory disease; Infestation; Lower abdominal pain; Abdominal pain; Surgery; Dermatology; Pathology; Helminths; Immunology","score_opus":0.006039067657443622,"score_gpt":0.20432758904135487,"score_spread":0.19828852138391126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169085095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947085,0.00042795477,0.000015286252,0.0002713727,0.00003054982,0.00043251936,0.00007138373,0.00005046167,0.0039919694],"genre_scores_gemma":[0.9991812,0.00008062722,0.000103399274,0.00010255414,0.000031488282,0.00004455251,0.000102493774,0.000025691294,0.00032796772],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990327,0.00005486061,0.00022842309,0.0002463288,0.00020298449,0.00023473262],"domain_scores_gemma":[0.9991032,0.00008689038,0.00009090255,0.00033124036,0.00001960929,0.00036817812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000024590285,0.00017109673,0.00023307519,0.00020298845,0.00005783948,0.0000073698857,0.00006743327,0.000023917068,0.00018016194],"category_scores_gemma":[0.000115114664,0.00013623944,0.00015027258,0.00015583761,0.00013699986,0.00007525893,0.000037217753,0.00013762646,0.00002620666],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029162705,0.0029081346,0.9937304,0.000056938057,0.00025845008,0.0005029031,0.0005294751,0.00006523742,0.000015025329,0.00010201382,0.00005550958,0.001484251],"study_design_scores_gemma":[0.0041773873,0.00020385801,0.9934602,0.0006438479,0.0002955411,0.00000413998,0.000022433425,0.00044247846,0.000021252288,0.00056590926,0.000038301994,0.00012464277],"about_ca_topic_score_codex":0.000016432641,"about_ca_topic_score_gemma":0.000015075547,"teacher_disagreement_score":0.0044727237,"about_ca_system_score_codex":0.00003511363,"about_ca_system_score_gemma":0.00008019365,"threshold_uncertainty_score":0.55556834},"labels":[],"label_agreement":null},{"id":"W2235092148","doi":"10.3389/fmicb.2015.01394","title":"Immune Evasion Mechanisms of Entamoeba histolytica: Progression to Disease","year":2015,"lang":"en","type":"review","venue":"Frontiers in Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Immune system; Biology; Entamoeba histolytica; Immunology; Microbiology; Cytotoxic T cell; Population; Medicine","score_opus":0.02474178522349635,"score_gpt":0.33678271461713516,"score_spread":0.3120409293936388,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2235092148","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000046930825,0.9928102,0.0027914476,0.000042138447,0.0019051408,0.0019761622,0.00013706574,0.000027413682,0.00026348658],"genre_scores_gemma":[0.00013812474,0.9781085,0.018870715,0.000043151307,0.00006418435,0.00024842212,0.0012802064,0.000059391492,0.0011873073],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99829155,0.0001752301,0.0006733507,0.0004596172,0.0000746465,0.00032562422],"domain_scores_gemma":[0.99888617,0.000020839783,0.00028521262,0.0005052952,0.000092921844,0.00020958584],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025953425,0.000355121,0.0020676102,0.0006015105,0.00003428534,0.0000029389844,0.00015153777,0.000400888,0.00006202926],"category_scores_gemma":[0.00008476955,0.0002528051,0.00036207912,0.00034149975,0.00011115526,0.000020708036,0.00014468827,0.0002855271,0.00008270886],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026801924,0.00080249045,0.00039314647,0.005643637,0.00039805294,0.00019658149,0.00004878139,2.8238873e-7,0.00023142026,0.00011562854,0.01856801,0.97333395],"study_design_scores_gemma":[0.00094342645,0.0005478742,0.000024608467,0.009535618,0.0013331292,0.00014832866,0.000020718471,0.0000015238047,0.000056668592,0.00021678372,0.9869487,0.0002225876],"about_ca_topic_score_codex":0.000014101145,"about_ca_topic_score_gemma":0.0000012535531,"teacher_disagreement_score":0.9731114,"about_ca_system_score_codex":0.00081557815,"about_ca_system_score_gemma":0.0005398641,"threshold_uncertainty_score":0.99999243},"labels":[],"label_agreement":null},{"id":"W224583256","doi":"10.1016/s0188-4409(00)00224-1","title":"Entamoeba dispar Galactose/N-Acetyl-d-Galactosamine Lectin","year":2000,"lang":"en","type":"article","venue":"Archives of Medical Research","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital","funders":"Medical Research Council","keywords":"Lectin; Dispar; Galactosamine; Entamoeba; Galactose; Microbiology; Entamoeba histolytica; Chemistry; Biochemistry; Biology","score_opus":0.04799575490666026,"score_gpt":0.4200536984601779,"score_spread":0.3720579435535177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W224583256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79174256,0.00036523127,0.0001880303,0.0063342517,0.00007663099,0.0004400488,0.000007560822,0.000051721512,0.20079395],"genre_scores_gemma":[0.97845495,0.0021597268,0.00048307382,0.00011999628,0.00022803791,0.000048138383,0.000044720346,0.000027869877,0.018433493],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99609953,0.00028531672,0.00037120312,0.0003599816,0.0022323001,0.00065165147],"domain_scores_gemma":[0.997404,0.0013107272,0.000034070825,0.00047836578,0.0000723216,0.0007005291],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00090627436,0.0001559594,0.0003745686,0.00032349603,0.00018688804,0.000014771868,0.000276166,0.00013970626,0.02375154],"category_scores_gemma":[0.0012887194,0.00011438486,0.00017082714,0.0004907356,0.0009194617,0.00005657768,0.00012631848,0.00091735704,0.0004493835],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012656918,0.002921808,0.09160991,0.00022870729,0.00035471004,0.0004143569,0.0009211178,0.0000017139423,0.0035261996,0.0017652779,0.006775151,0.89021534],"study_design_scores_gemma":[0.014750154,0.006769086,0.6271413,0.001731899,0.00016536642,0.00074848154,0.00062967365,0.0033689237,0.017765392,0.004261457,0.32216424,0.0005040602],"about_ca_topic_score_codex":0.00084051344,"about_ca_topic_score_gemma":0.000059637405,"teacher_disagreement_score":0.8897113,"about_ca_system_score_codex":0.000044065557,"about_ca_system_score_gemma":0.00043538283,"threshold_uncertainty_score":0.9771409},"labels":[],"label_agreement":null},{"id":"W2247139643","doi":"10.1139/o11-084","title":"Effect of bovine lactoferrin in a therapeutic hamster model of hepatic amoebiasis<sup>1</sup>This article is part of a Special Issue entitled Lactoferrin and has undergone the Journal's usual peer review process.","year":2012,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Entamoeba histolytica; Amoebiasis; Metronidazole; Lactoferrin; Immune system; Liver function; Dysentery; Immunology; Biology; Innate immune system; Medicine; Gastroenterology; Internal medicine; Microbiology; Antibiotics; Biochemistry","score_opus":0.024801444210493472,"score_gpt":0.2951781496356075,"score_spread":0.27037670542511405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2247139643","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98899055,0.008555819,0.000022336239,0.00039988826,0.000023587421,0.00023467581,0.000016796557,0.0000028991262,0.0017534748],"genre_scores_gemma":[0.9966991,0.0016783706,0.000016310625,0.000106820306,0.0001331797,0.000010838174,0.000010020892,0.0000076080505,0.001337778],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991555,0.000109320325,0.00033424422,0.00011770661,0.00010909044,0.0001741256],"domain_scores_gemma":[0.9993946,0.00010999451,0.00017072717,0.00015996188,0.00009769738,0.000067018205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055753934,0.00013413279,0.0004122295,0.0000331069,0.00003795021,0.000003036983,0.000046097244,0.00011971411,0.0007486918],"category_scores_gemma":[0.00009083759,0.000080177524,0.00006330923,0.000100156554,0.00022669644,0.00003155739,0.000030873674,0.0001444909,0.0000029117516],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002514478,0.0024340088,0.63215053,0.011593467,0.0007376557,0.0000073628103,0.0042010504,0.000013473362,0.32972127,0.000045407054,0.0029797314,0.013601576],"study_design_scores_gemma":[0.004038218,0.001630312,0.002701936,0.000924441,0.0009825696,0.00012317547,0.0003205478,0.0012172414,0.9858562,0.00011218004,0.0019146462,0.0001785817],"about_ca_topic_score_codex":0.0000412008,"about_ca_topic_score_gemma":0.0000028730958,"teacher_disagreement_score":0.6561349,"about_ca_system_score_codex":0.000022001792,"about_ca_system_score_gemma":0.00006293067,"threshold_uncertainty_score":0.81976503},"labels":[],"label_agreement":null},{"id":"W2277325967","doi":"","title":"CANADIAN HOSPITAL EPIDEMIOLOGY COMMITTEE. CANADIAN NOSOCOMIAL INFECTION SURVEILLANCE PROGRAM. PROSPECTIVE SURVEILLANCE FOR PRIMARY BLOODSTREAM INFECTIONS OCCURRING IN CANADIAN HEMODIALYSIS UNITS","year":2002,"lang":"en","type":"article","venue":"","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Epidemiology; Hemodialysis; Bloodstream infection; Epidemiological surveillance; Epidemiologic Surveillance; Intensive care medicine; Emergency medicine; Medical emergency; Surgery; Internal medicine","score_opus":0.01974011387949086,"score_gpt":0.2749193187356728,"score_spread":0.25517920485618195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2277325967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9445046,0.00016534323,0.000060876602,0.004023747,0.0008704849,0.004624182,0.0005783942,0.00021602638,0.044956304],"genre_scores_gemma":[0.9956431,0.00007913905,0.00054996414,0.00092822564,0.00027945897,0.0012117216,0.0005459169,0.00005746877,0.0007050004],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9966229,0.00021381376,0.00060957426,0.0006932132,0.0001252827,0.0017352011],"domain_scores_gemma":[0.99657726,0.00036598774,0.00013806461,0.000484492,0.00052340503,0.0019107701],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000671885,0.00043094603,0.000833347,0.0015374445,0.0007823474,0.00004680705,0.00010857842,0.00042541357,0.00038326377],"category_scores_gemma":[0.0011770986,0.00043317405,0.00020551089,0.0017724792,0.00014491862,0.00018080344,0.000019390409,0.0004895305,0.00008990165],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000930247,0.00033243978,0.9881476,0.000033208868,0.0002466511,0.000055057048,0.00015372108,0.00009213538,8.623344e-7,0.00033432263,0.0029281594,0.0076665254],"study_design_scores_gemma":[0.0022901844,0.00079234724,0.9534426,0.000037316455,0.00006827415,0.00009196779,0.00004842756,0.0014300249,0.0000072969506,0.00009236887,0.04127366,0.000425554],"about_ca_topic_score_codex":0.99942595,"about_ca_topic_score_gemma":0.99997663,"teacher_disagreement_score":0.05113846,"about_ca_system_score_codex":0.0078113955,"about_ca_system_score_gemma":0.0029512136,"threshold_uncertainty_score":0.999812},"labels":[],"label_agreement":null},{"id":"W2304783255","doi":"10.1177/0049475515627236","title":"Molecular prevalence of <i>Entamoeba histolytica/dispar</i> infection among patients attending four health centres in north-west Ethiopia","year":2016,"lang":"en","type":"article","venue":"Tropical Doctor","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Society of Microbiologists","funders":"Amhara Regional Health Bureau","keywords":"Medicine; Entamoeba histolytica; Dispar; Epidemiology; Tropical medicine; Amoebiasis; Environmental health; Immunology; Internal medicine; Pathology","score_opus":0.014977366807829802,"score_gpt":0.27419098649149504,"score_spread":0.25921361968366524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2304783255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99792594,0.00004577148,0.00056950015,0.00037856755,0.00021535723,0.0004817211,0.000025006333,0.000040862556,0.00031729814],"genre_scores_gemma":[0.99913824,0.00014232218,0.00013575579,0.00015428726,0.00004460878,0.000027795411,0.00001141961,0.000017758752,0.00032781938],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998617,0.000084882886,0.00041435077,0.00028566434,0.0002713712,0.0003267664],"domain_scores_gemma":[0.9992655,0.00006548455,0.00015007964,0.000249827,0.0000781621,0.00019093456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000040144452,0.000159746,0.0003152374,0.00013358513,0.000052593507,0.000005140776,0.000051157782,0.000080378224,0.00024838187],"category_scores_gemma":[0.0001481048,0.00010832899,0.000109248234,0.00020984716,0.00012288967,0.0001073559,0.00003981197,0.00014109844,0.000054311113],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008150232,0.00057902955,0.99445534,0.00020126207,0.000037072572,0.000019187148,0.000047031215,0.0000023142713,0.00023550802,0.0005534148,0.000067000015,0.0037213187],"study_design_scores_gemma":[0.0025307848,0.0005785954,0.99533075,0.00034312668,0.000052476586,0.000004992839,0.0000021749465,0.000015899028,0.0005108261,0.00001644951,0.0005181554,0.00009575183],"about_ca_topic_score_codex":0.0008314286,"about_ca_topic_score_gemma":0.00058264926,"teacher_disagreement_score":0.0036255668,"about_ca_system_score_codex":0.0006878197,"about_ca_system_score_gemma":0.00007244936,"threshold_uncertainty_score":0.4417528},"labels":[],"label_agreement":null},{"id":"W2324643197","doi":"10.5152/tpd.2014.3327","title":"Twenty-Five years of Intestinal Parasite Prevalence in İstanbul University, İstanbul Faculty of Medicine: A Retrospective Study","year":2014,"lang":"en","type":"article","venue":"Turkish Journal of Parasitology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stantec (Canada)","funders":"","keywords":"Enterobius; Ascaris lumbricoides; Blastocystis; Intestinal parasite; Medicine; Veterinary medicine; Parasite hosting; General hospital; Helminths; University hospital; Internal medicine; Biology; Feces; Pediatrics; Immunology; Microbiology","score_opus":0.016889719919008953,"score_gpt":0.33439533652552395,"score_spread":0.317505616606515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2324643197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971901,0.000106589665,0.00036068461,0.0001909926,0.00020877266,0.00029021187,0.000010899228,0.0000070000933,0.0016347371],"genre_scores_gemma":[0.9990538,0.000059369482,0.00058121997,0.000018124809,0.00008638599,8.6071805e-7,0.0000030741617,0.000009973856,0.00018722696],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99829453,0.00027349402,0.00065380824,0.0002007094,0.00036743475,0.0002099968],"domain_scores_gemma":[0.9980629,0.00020576284,0.00082325365,0.0002168929,0.0005773267,0.000113855276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058444735,0.00015607341,0.00087315176,0.0004933532,0.000031473588,0.0000020130906,0.0001795269,0.00009995261,0.00010456472],"category_scores_gemma":[0.0005900062,0.00013259244,0.00012461415,0.00046780636,0.00041952686,0.00009593503,0.00004988395,0.00038543297,0.000004706527],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000924709,0.0010622767,0.99249774,0.000058222304,0.00028066567,0.0006442429,0.0024388568,0.000030248268,0.0005492361,0.00035890302,0.00021699833,0.0009379044],"study_design_scores_gemma":[0.006755271,0.006918349,0.9808897,0.00037666527,0.00047690113,0.0011775634,0.0025997707,0.000028502554,0.00021351725,0.00036570436,0.00011569565,0.00008235623],"about_ca_topic_score_codex":0.000354585,"about_ca_topic_score_gemma":0.00011403736,"teacher_disagreement_score":0.0116080325,"about_ca_system_score_codex":0.00021622136,"about_ca_system_score_gemma":0.00013102338,"threshold_uncertainty_score":0.54069626},"labels":[],"label_agreement":null},{"id":"W2328138538","doi":"10.1097/01.ccm.0000458548.55869.bd","title":"1051","year":2014,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Medicine; Intensive care medicine","score_opus":0.017907496384160712,"score_gpt":0.3495528117290375,"score_spread":0.3316453153448768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2328138538","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15150413,0.0016332342,0.011427101,0.023568988,0.001367711,0.00033820057,0.0000049065366,0.00029129267,0.80986446],"genre_scores_gemma":[0.99570197,0.0000064732344,0.0005313693,0.0020626101,0.00081714976,0.000014825339,0.000029487872,0.00001433906,0.0008217985],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99924237,0.000026745683,0.00014477203,0.00017723054,0.00020773173,0.0002011622],"domain_scores_gemma":[0.999116,0.00017887884,0.000009117109,0.000246199,0.00021561922,0.00023416264],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000874195,0.00010260939,0.00023881558,0.00006670249,0.0000870673,0.0000036778047,0.000029651657,0.000062632724,0.0014060866],"category_scores_gemma":[0.0011960207,0.000067395755,0.00004982825,0.00011417533,0.0002919709,0.000024754345,0.000015822186,0.00013165857,0.00027309736],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028033298,0.00080628396,0.26646778,0.0017686444,0.000190083,0.0007522903,0.0028004562,0.0000011134405,0.0021272448,0.360332,0.037775643,0.3266981],"study_design_scores_gemma":[0.016364098,0.014118124,0.22192718,0.0014747613,0.002475658,0.0016815958,0.008467747,0.0005393941,0.0028251577,0.0120107075,0.7173837,0.0007318721],"about_ca_topic_score_codex":0.000045014494,"about_ca_topic_score_gemma":0.0000036684173,"teacher_disagreement_score":0.8441978,"about_ca_system_score_codex":0.000053042928,"about_ca_system_score_gemma":0.000024309309,"threshold_uncertainty_score":0.9995068},"labels":[],"label_agreement":null},{"id":"W2332322794","doi":"10.3949/ccjm.81a.14051","title":"A 41-year-old man with abdominal pain","year":2014,"lang":"en","type":"article","venue":"Cleveland Clinic Journal of Medicine","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Regina Qu'Appelle Health Region; Regina General Hospital","funders":"","keywords":"Medicine; Abdominal pain; General surgery; Internal medicine","score_opus":0.022037424451502575,"score_gpt":0.3132638688594313,"score_spread":0.2912264444079287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2332322794","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94519776,0.00038922727,0.018703774,0.012230484,0.00067476137,0.0002569314,0.00000199122,0.000026196545,0.022518871],"genre_scores_gemma":[0.98967296,0.00014087142,0.0021578064,0.0020563058,0.001470687,0.0000024806614,0.000004287447,0.000021360389,0.0044732587],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984629,0.00014528778,0.00062607025,0.00013838497,0.0004140951,0.00021322098],"domain_scores_gemma":[0.9983903,0.0004174914,0.0004104159,0.00022234551,0.00027075718,0.0002886472],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0024954702,0.00015784736,0.0005991777,0.00016717831,0.0000733314,0.0000056870717,0.000079756544,0.000087988454,0.0012591537],"category_scores_gemma":[0.00073482376,0.00008215898,0.000112233734,0.00016226884,0.00021426092,0.000054839045,0.000011397249,0.00040875343,0.000063087056],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0071992166,0.0012306931,0.7067628,0.00019907045,0.0014939831,0.001316075,0.00086280645,0.0000033923845,0.0001850002,0.0006037698,0.06861068,0.21153253],"study_design_scores_gemma":[0.08332122,0.054285705,0.702759,0.0045883297,0.0029406652,0.0124596115,0.002770343,0.0002599044,0.0001304361,0.0023353584,0.1337169,0.00043250015],"about_ca_topic_score_codex":0.00001910438,"about_ca_topic_score_gemma":0.000008108865,"teacher_disagreement_score":0.21110003,"about_ca_system_score_codex":0.000051241794,"about_ca_system_score_gemma":0.00011446166,"threshold_uncertainty_score":0.9996538},"labels":[],"label_agreement":null},{"id":"W2332565566","doi":"10.1097/acm.0b013e31822c0aca","title":"Artistʼs Statement: The Last Supper","year":2011,"lang":"en","type":"article","venue":"Academic Medicine","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Advanced Micro Devices (Canada)","funders":"","keywords":"Nothing; Art; Visual arts; Art history; Philosophy; Epistemology","score_opus":0.07009658035856549,"score_gpt":0.32880854069966864,"score_spread":0.25871196034110316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2332565566","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7128851,0.0015198735,0.0012448562,0.0101830885,0.00088217313,0.00087138865,0.000006399796,0.00024886418,0.2721583],"genre_scores_gemma":[0.98772985,0.0005158292,0.00007636669,0.0027885253,0.00044028144,0.000046665595,0.000020941496,0.000018327852,0.008363238],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989196,0.000035278255,0.00033190532,0.00018763547,0.0002573922,0.00026816045],"domain_scores_gemma":[0.9993422,0.000061247985,0.000084305626,0.0003079507,0.000056977056,0.00014733306],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034486505,0.00013934952,0.00022481705,0.00007676389,0.00012628836,0.0000013013471,0.00009447739,0.000102065154,0.0031939473],"category_scores_gemma":[0.00012417366,0.00006859653,0.000038295497,0.00019800146,0.00027041798,0.000057495636,0.00003537405,0.0004446542,0.00054632657],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002608719,0.00015348845,0.5904909,0.000085491396,0.0006382605,0.00026484006,0.021893809,4.539194e-7,0.0019077354,0.023127558,0.34662265,0.014553999],"study_design_scores_gemma":[0.009082625,0.0022835787,0.45097253,0.00059233326,0.0012736589,0.0012554488,0.00698456,0.00011220895,0.004127874,0.005850202,0.5171094,0.0003555577],"about_ca_topic_score_codex":0.00020063538,"about_ca_topic_score_gemma":0.000007774869,"teacher_disagreement_score":0.27484477,"about_ca_system_score_codex":0.000056469373,"about_ca_system_score_gemma":0.000044031665,"threshold_uncertainty_score":0.99771726},"labels":[],"label_agreement":null},{"id":"W2339338044","doi":"10.1371/journal.ppat.1005579","title":"Entamoeba histolytica Cysteine Proteinase 5 Evokes Mucin Exocytosis from Colonic Goblet Cells via αvβ3 Integrin","year":2016,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"MARCKS; Mucin; Secretion; Goblet cell; Cell biology; Entamoeba histolytica; Biology; Mucus; Protein kinase C; Integrin; Signal transduction; Microbiology; Biochemistry; Receptor; Epithelium","score_opus":0.014539001612878476,"score_gpt":0.22245085876721843,"score_spread":0.20791185715433996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2339338044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99317,0.00026782864,0.00083598506,0.0010327944,0.00027033576,0.001175198,0.00043515663,0.00020634478,0.0026063193],"genre_scores_gemma":[0.99242103,0.00008631655,0.001879685,0.00019315512,0.00030232465,0.00035056614,0.00008055671,0.00006489306,0.004621461],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99814814,0.00009117827,0.00040694105,0.00055284885,0.00033754169,0.00046336898],"domain_scores_gemma":[0.99853104,0.00016412925,0.00015106898,0.00071099494,0.00014915703,0.0002936217],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000103656195,0.0003330231,0.0005144689,0.00015951652,0.00014950523,0.000015587126,0.00011512313,0.00018325928,0.002201051],"category_scores_gemma":[0.00011988312,0.00021425611,0.00021714225,0.00019944116,0.00012772073,0.00010006981,0.000081548715,0.00017947139,0.0021342828],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029374092,0.0015169416,0.01716344,0.00005543194,0.00045013355,0.00062739494,0.00021111297,3.0069245e-7,0.9722082,0.00008109407,0.0013497653,0.0060424632],"study_design_scores_gemma":[0.007363547,0.0032086808,0.013470893,0.0009199815,0.0015210924,0.00013478057,0.00010894203,0.0002083212,0.9589493,0.0004124728,0.013082481,0.000619474],"about_ca_topic_score_codex":0.00037861182,"about_ca_topic_score_gemma":0.000089788366,"teacher_disagreement_score":0.0132588465,"about_ca_system_score_codex":0.0006464513,"about_ca_system_score_gemma":0.00014259614,"threshold_uncertainty_score":0.99871105},"labels":[],"label_agreement":null},{"id":"W2346139826","doi":"10.1016/s1879-8527(21)44637-x","title":"10.1016/s1879-8527(21)44637-x","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Humanities; Gynecology; Philosophy","score_opus":0.005114624556124129,"score_gpt":0.19400523127266803,"score_spread":0.1888906067165439,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2346139826","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004345547,0.000043832657,0.0000011913502,0.00031242808,0.0000018996869,0.0002468838,0.000009220831,0.00013042065,0.9949086],"genre_scores_gemma":[0.0021589014,4.4434395e-7,0.00016507861,0.000061051476,0.00013286324,0.000028426011,0.000030077683,0.000022843913,0.9974003],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993302,0.000013654124,0.00012842503,0.00018090682,0.0001322287,0.00021457087],"domain_scores_gemma":[0.99948746,0.000019230969,0.00001602178,0.0002677526,0.000042102292,0.00016745996],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000051119227,0.00012035708,0.00017279683,0.00007347465,0.00008445678,0.000012437434,0.00004371276,0.00005809788,0.9983062],"category_scores_gemma":[0.000018260658,0.000099177676,0.00007222205,0.00018319338,0.000024752102,0.000044866443,0.000014733296,0.00008534052,0.9970388],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015907217,0.00030640524,0.0000095274645,0.000009830461,0.000098594195,0.000056031524,0.00001860613,0.000009808417,0.000022876615,0.0000014928734,0.33315593,0.6661518],"study_design_scores_gemma":[0.00078398036,0.00042613046,0.0006603212,0.000029342176,0.00008623886,0.0000863863,9.672909e-7,0.000051841344,0.00008878848,0.0000056852687,0.99768424,0.00009609794],"about_ca_topic_score_codex":0.000052013853,"about_ca_topic_score_gemma":1.373437e-7,"teacher_disagreement_score":0.66605574,"about_ca_system_score_codex":0.0000664951,"about_ca_system_score_gemma":0.00003665156,"threshold_uncertainty_score":0.40443483},"labels":[],"label_agreement":null},{"id":"W2414623808","doi":"10.1111/j.1525-1470.2005.22321.x","title":"What syndrome is this?","year":2005,"lang":"en","type":"article","venue":"Pediatric Dermatology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Sick child; Welsh; Medicine; Sick building syndrome; University hospital; Pediatrics; Family medicine; History; Geography","score_opus":0.010179976859794493,"score_gpt":0.27232439208753856,"score_spread":0.26214441522774407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414623808","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9706995,0.0031532755,0.00007092744,0.009282023,0.0006851044,0.00020462711,0.000002606007,0.0001213072,0.015780624],"genre_scores_gemma":[0.98950243,0.0018554055,0.0005646712,0.002400035,0.0002663982,0.000026254116,0.0000124871585,0.000015001279,0.0053573158],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99922806,0.000019547188,0.0001979954,0.0001910177,0.00010699067,0.0002564074],"domain_scores_gemma":[0.9995196,0.000043445405,0.00005311197,0.0002289427,0.000045306417,0.00010962421],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000029553124,0.00011602335,0.00024765986,0.00017583682,0.00008039417,0.000016780743,0.00004406637,0.00012767626,0.0023675729],"category_scores_gemma":[0.000016934187,0.00009631278,0.000084985506,0.00020840147,0.000032037467,0.0002126587,0.000028759785,0.00012817586,0.0052257],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033863886,0.0007286979,0.87685966,0.00010109401,0.00018009671,0.0019763387,0.00055861904,0.000001413441,0.0000059488707,0.0005784072,0.1085206,0.010455284],"study_design_scores_gemma":[0.008822236,0.0005338042,0.26311556,0.00003675502,0.0018956792,0.1583388,0.00029312877,0.00058756745,0.0007831504,0.0008604144,0.5640141,0.00071881956],"about_ca_topic_score_codex":0.000013441729,"about_ca_topic_score_gemma":0.0000027456522,"teacher_disagreement_score":0.6137441,"about_ca_system_score_codex":0.000050538805,"about_ca_system_score_gemma":0.00006466159,"threshold_uncertainty_score":0.9985444},"labels":[],"label_agreement":null},{"id":"W2419111489","doi":"10.3899/jrheum.080849","title":"Dr. Arthanari and Dr. Nisar reply","year":2009,"lang":"en","type":"article","venue":"The Journal of Rheumatology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.014067174805588195,"score_gpt":0.2810723125824461,"score_spread":0.26700513777685786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419111489","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9795021,0.0008652098,0.00021633873,0.016912008,0.00014877126,0.000061012626,3.7286927e-7,0.000008127677,0.0022860519],"genre_scores_gemma":[0.9973913,0.0011050372,0.00014546167,0.0007553278,0.000012429936,2.6327547e-7,4.1829787e-7,0.0000044153053,0.00058533694],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99943465,0.000057391924,0.00025530148,0.00004827224,0.000085482534,0.0001188902],"domain_scores_gemma":[0.999443,0.00008973618,0.00018611741,0.00013790319,0.00007561609,0.000067613924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026373423,0.00006969866,0.00026227164,0.00007635336,0.00008956912,0.0000045711486,0.000043253433,0.000042710635,0.00006643228],"category_scores_gemma":[0.00008087493,0.00003773938,0.00005203132,0.00006515283,0.0000809579,0.000043012365,0.000009771396,0.00018005272,0.00001836193],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011247861,0.0005840945,0.920065,0.000031294705,0.0007357852,0.0002946904,0.0018295895,0.000010882825,0.0007166298,0.0058151623,0.04231889,0.026473213],"study_design_scores_gemma":[0.009510715,0.0074577266,0.4892471,0.000431584,0.0010544098,0.41650802,0.0010832223,0.00016372661,0.0010151082,0.01702668,0.056251783,0.00024989148],"about_ca_topic_score_codex":0.000056910005,"about_ca_topic_score_gemma":0.0000067741594,"teacher_disagreement_score":0.43081784,"about_ca_system_score_codex":0.00001983153,"about_ca_system_score_gemma":0.000051998424,"threshold_uncertainty_score":0.15389673},"labels":[],"label_agreement":null},{"id":"W2438900395","doi":"10.1001/archpedi.154.5.523","title":"Radiological Case of the Month","year":2000,"lang":"en","type":"article","venue":"Archives of Pediatrics and Adolescent Medicine","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario","funders":"","keywords":"Radiological weapon; Medicine; Radiology","score_opus":0.01143470595105784,"score_gpt":0.2561350614167258,"score_spread":0.24470035546566798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2438900395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876593,0.0017871018,0.00006078429,0.00081355445,0.00006277803,0.00021407456,0.000009336106,0.0000074141467,0.009385656],"genre_scores_gemma":[0.99554473,0.0032995734,0.00020583592,0.00015290605,0.00020227749,0.0000018510224,0.000003829414,0.000005115231,0.0005838955],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994076,0.000030396202,0.00022980427,0.0001191085,0.00010429812,0.000108778804],"domain_scores_gemma":[0.99954313,0.00009773058,0.00007352067,0.0001805983,0.000017880107,0.00008711652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006144282,0.000086745495,0.00025013648,0.00006489132,0.000057258956,7.573729e-7,0.00003924934,0.000030164752,0.00014730153],"category_scores_gemma":[0.000060193852,0.00004305114,0.00006815264,0.0001349107,0.0003535026,0.0000105968575,0.000024369367,0.000113462665,9.647022e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046324416,0.0011080394,0.7511741,0.00066485733,0.00007527914,0.00057879236,0.001210783,0.000014900006,0.0007093929,0.001167289,0.002121604,0.2407117],"study_design_scores_gemma":[0.006588723,0.001802758,0.9815966,0.00042319638,0.00081771443,0.0031536303,0.00042243366,0.00041435545,0.00026187356,0.0012416507,0.0031441804,0.00013289986],"about_ca_topic_score_codex":0.0000636902,"about_ca_topic_score_gemma":0.0000023032226,"teacher_disagreement_score":0.2405788,"about_ca_system_score_codex":0.000004426339,"about_ca_system_score_gemma":0.000023904233,"threshold_uncertainty_score":0.17555745},"labels":[],"label_agreement":null},{"id":"W2479067222","doi":"10.4236/ojrad.2016.63027","title":"A Randomized Prospective Assessment of Safety and Effectiveness of Instillation of Tissue Plasminogen Activator in the Management of Intra-Abdominal Abscesses","year":2016,"lang":"en","type":"article","venue":"Open Journal of Radiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakeridge Health; University of Toronto; University Health Network","funders":"","keywords":"Medicine; Surgery; Tissue plasminogen activator; Abscess; Sepsis; Prospective cohort study; Randomized controlled trial; Catheter; Internal medicine","score_opus":0.012587154123054283,"score_gpt":0.33329364886808804,"score_spread":0.32070649474503377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2479067222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930994,0.00012839734,0.0033940685,0.00008994205,0.00006111104,0.0011715346,0.000008856267,4.8106335e-7,0.0020462025],"genre_scores_gemma":[0.99758667,0.0004250705,0.0019364248,0.0000028522613,0.000012662914,0.00001776105,0.0000010175995,0.0000045174097,0.000013029765],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985782,0.00051865936,0.0006106556,0.00008790926,0.00013100255,0.00007358433],"domain_scores_gemma":[0.99791867,0.00092109654,0.00081819476,0.00011479437,0.0002044331,0.000022819184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018720581,0.00008494318,0.00094176986,0.0001392383,0.000017054708,0.0000019695626,0.00010535771,0.000049109076,0.000036959438],"category_scores_gemma":[0.00010688021,0.000040547653,0.000071497445,0.00012360817,0.0002561596,0.00010216477,0.00004094493,0.000069290356,9.7307506e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.34594554,0.0017539854,0.509624,0.0014850233,0.006064021,0.0001358213,0.0015269708,0.000128584,0.08647383,0.016503887,0.000015278494,0.030343093],"study_design_scores_gemma":[0.15479825,0.0023207236,0.7913951,0.0012039542,0.00057787675,0.000578958,0.0003590991,0.000012778103,0.04766853,0.0010100037,0.000025815041,0.000048872116],"about_ca_topic_score_codex":0.00005318816,"about_ca_topic_score_gemma":0.0000038379776,"teacher_disagreement_score":0.28177115,"about_ca_system_score_codex":0.0000763841,"about_ca_system_score_gemma":0.000107750835,"threshold_uncertainty_score":0.16534853},"labels":[],"label_agreement":null},{"id":"W2499176766","doi":"10.1016/b0-32-301206-x/50045-7","title":"Liver and Spleen","year":2006,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Spleen; Medicine; Internal medicine","score_opus":0.012469767291159974,"score_gpt":0.23568562870142634,"score_spread":0.22321586141026636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2499176766","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002464523,0.0017063392,0.000002527291,0.000033544544,0.00010899722,0.0004314483,0.00002127499,0.000053065167,0.99739635],"genre_scores_gemma":[0.004010515,0.0001634056,0.0002593205,0.00019836146,0.0003459618,0.000015663396,0.000053054726,0.00005783062,0.9948959],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99924195,0.000004665285,0.00018397957,0.00026710014,0.00014499281,0.00015731312],"domain_scores_gemma":[0.9994821,0.000017488055,0.00007807526,0.0002754339,0.0000525255,0.00009435657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000043382614,0.00025284244,0.00036648297,0.00010842903,0.000077666504,0.000013054129,0.000026312688,0.00023590054,0.0004413792],"category_scores_gemma":[0.0000029107255,0.0002034238,0.00012947676,0.0000044296958,0.00010486707,0.000013321882,0.000044296215,0.00023429979,0.00031982217],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001270666,0.000015574571,0.00028895843,0.000074857264,0.00020969505,0.00033003642,0.000025019684,2.2916927e-8,0.000002156953,0.002533199,0.0012186416,0.99528915],"study_design_scores_gemma":[0.0006083943,0.00013907652,0.0011791375,0.00027580676,0.0005415567,0.00028409532,8.30816e-7,0.0000025624934,0.0000093805,0.0015838845,0.9952029,0.00017238354],"about_ca_topic_score_codex":0.000005167918,"about_ca_topic_score_gemma":0.00001613284,"teacher_disagreement_score":0.9951168,"about_ca_system_score_codex":0.000069901755,"about_ca_system_score_gemma":0.000054856187,"threshold_uncertainty_score":0.82953817},"labels":[],"label_agreement":null},{"id":"W2568226435","doi":"10.1128/iai.00905-16","title":"MUC2 Mucin and Butyrate Contribute to the Synthesis of the Antimicrobial Peptide Cathelicidin in Response to Entamoeba histolytica- and Dextran Sodium Sulfate-Induced Colitis","year":2017,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Cathelicidin; Mucin; Entamoeba histolytica; Mucin 2; Biology; Goblet cell; Mucus; Antimicrobial peptides; Colitis; Microbiology; Biochemistry; Immunology; Antimicrobial; Gene expression; Epithelium","score_opus":0.017974404036918572,"score_gpt":0.2782741439714305,"score_spread":0.26029973993451194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2568226435","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949013,0.000021518772,0.000017767345,0.0037643872,0.00016673768,0.00064923684,0.00004577523,0.000013513297,0.00041978023],"genre_scores_gemma":[0.99914455,0.00009609008,0.000018322538,0.0002729798,0.000023011822,0.000040110903,0.0000014441268,0.000010291172,0.0003932026],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99911535,0.00025566117,0.00020926546,0.00016331382,0.00007813182,0.00017829282],"domain_scores_gemma":[0.9990373,0.00021732374,0.000099745914,0.00045179593,0.00009116602,0.0001026366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062056084,0.00013288618,0.00025234986,0.00011376185,0.00074965373,0.000055963083,0.000066486486,0.000075272714,0.000012826285],"category_scores_gemma":[0.0010136763,0.000085827,0.000045896224,0.00009972477,0.00016208149,0.000079843856,0.0001329793,0.00018850858,0.0000051602715],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003966463,0.0005718746,0.64106035,0.00008548959,0.00019468756,0.000019333715,0.0043308167,0.0000029390478,0.3341511,0.00019339501,0.00033494658,0.0150886],"study_design_scores_gemma":[0.0013958308,0.00027263587,0.9162522,0.00013996797,0.00008859983,0.000119748634,0.00013802582,0.00001763306,0.079679266,0.000017071414,0.0017960009,0.00008300513],"about_ca_topic_score_codex":0.01779052,"about_ca_topic_score_gemma":0.004822937,"teacher_disagreement_score":0.27519187,"about_ca_system_score_codex":0.000100626305,"about_ca_system_score_gemma":0.00006272065,"threshold_uncertainty_score":0.9887501},"labels":[],"label_agreement":null},{"id":"W2575368573","doi":"10.1080/21688370.2017.1283386","title":"<i>Entamoeba histolytica</i>: Host parasite interactions at the colonic epithelium","year":2017,"lang":"en","type":"article","venue":"Tissue Barriers","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Entamoeba histolytica; Pathogenesis; Intestinal epithelium; Biology; Intestinal mucosa; Mucus; Epithelium; Microbiology; Immune system; Immunology; Parasite hosting; Entamoeba; Asymptomatic carrier; Disease; Pathology; Medicine; Genetics","score_opus":0.016085610868165807,"score_gpt":0.32740954381431875,"score_spread":0.31132393294615296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2575368573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8992385,0.0003799292,0.00007337487,0.010618718,0.001354755,0.00066464604,0.00005168076,0.00009145852,0.08752689],"genre_scores_gemma":[0.9069101,0.000050115174,0.0000652461,0.0004528371,0.00015528886,0.00006915929,0.000018588842,0.000022797258,0.09225585],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991599,0.00002874771,0.00016113164,0.00022893236,0.0001560223,0.00026529722],"domain_scores_gemma":[0.99857503,0.000057927016,0.00013481139,0.0009418194,0.00005828173,0.00023213845],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001031167,0.00015103394,0.00019642276,0.000044443063,0.0017303993,0.00005610794,0.00014989739,0.000057089543,0.0039466606],"category_scores_gemma":[0.00019273601,0.00010223573,0.00009971308,0.000048873095,0.00036348618,0.00012108462,0.00009869687,0.00018509883,0.0018554925],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090028666,0.0005977461,0.7492962,0.0000977586,0.0016830806,0.0011104966,0.0035385417,0.000011610557,0.022879802,0.0038235213,0.19596903,0.020091966],"study_design_scores_gemma":[0.0014752501,0.00025161737,0.18966275,0.000052898176,0.00043902596,0.0004683767,0.0001848662,0.000043966127,0.0072567463,0.000061886225,0.79994184,0.00016078693],"about_ca_topic_score_codex":0.0006796228,"about_ca_topic_score_gemma":0.0005523624,"teacher_disagreement_score":0.6039728,"about_ca_system_score_codex":0.00033303344,"about_ca_system_score_gemma":0.00010385306,"threshold_uncertainty_score":0.99956924},"labels":[],"label_agreement":null},{"id":"W2605559231","doi":"10.1139/cjpp-2016-0505","title":"Development of a novel rationally designed antibiotic to inhibit a nontraditional bacterial target","year":2017,"lang":"en","type":"article","venue":"Canadian Journal of Physiology and Pharmacology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"St. Boniface Hospital; University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Chlamydia trachomatis; Microbiology; Bacteria; Biology; Antibiotics; Chlamydia; Bacterial cell structure; Bacterial growth; Virology; Immunology","score_opus":0.02970825614904192,"score_gpt":0.29972772120637886,"score_spread":0.2700194650573369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605559231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977137,0.000027377153,0.00037859235,0.0007740711,0.0006470941,0.00012950874,0.000032778993,0.0000011158855,0.00029579125],"genre_scores_gemma":[0.9892797,0.000003565445,0.009921755,0.00041079987,0.00031210284,0.00000258056,0.000015907463,0.0000050564595,0.00004857084],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99944675,0.000023781628,0.00024322952,0.00008896572,0.00004310684,0.00015414358],"domain_scores_gemma":[0.9992001,0.00003352689,0.00020456745,0.000057279136,0.00017635456,0.00032817115],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012868928,0.000078965975,0.00024870818,0.00015864226,0.00030690068,0.000006315599,0.00006475168,0.00006884808,0.0011708981],"category_scores_gemma":[0.000037529866,0.00006699535,0.000042795553,0.000026634987,0.00016732277,0.00006477779,0.000009905584,0.00010166549,0.000005153819],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003142156,0.00013362935,0.0037181326,0.000027098802,0.0003204655,0.000060187183,0.00027244273,0.000014259965,0.9933788,0.0002915965,0.0010079661,0.00046117604],"study_design_scores_gemma":[0.006988645,0.0010291111,0.61343807,0.00007686417,0.00021324377,0.0007213261,0.00002746249,0.000040516403,0.3687061,0.00024972623,0.008368232,0.00014068985],"about_ca_topic_score_codex":0.00010385208,"about_ca_topic_score_gemma":0.0004020335,"teacher_disagreement_score":0.6246727,"about_ca_system_score_codex":0.00006307368,"about_ca_system_score_gemma":0.0018065891,"threshold_uncertainty_score":0.99974215},"labels":[],"label_agreement":null},{"id":"W2619276466","doi":"10.14740/jocmr3065w","title":"<i>Entamoeba histolytica</i> Infection in Female Sex Workers: A Matched Case-Control Study in Durango, Mexico","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Medicine Research","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Entamoeba histolytica; Medicine; Seroprevalence; Condom; Confidence interval; Socioeconomic status; Odds ratio; Sex workers; Demography; Female sex; Sex work; Serology; Immunology; Antibody; Internal medicine; Syphilis; Environmental health; Population; Human immunodeficiency virus (HIV); Research methodology","score_opus":0.23344991938440535,"score_gpt":0.550952620972668,"score_spread":0.3175027015882626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2619276466","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9854037,0.00023925229,0.000063136315,0.0067404956,0.00066661794,0.0010750218,0.0000014177872,0.000008948828,0.0058014113],"genre_scores_gemma":[0.9973607,0.0003332852,0.000086063956,0.00014613652,0.0011743176,0.00003134146,5.883305e-7,0.00002559145,0.00084197],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99465513,0.0011346757,0.0021823929,0.00033277003,0.0011800788,0.00051492476],"domain_scores_gemma":[0.9950168,0.0024776687,0.0007008617,0.0007222543,0.000608725,0.00047364738],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.016829241,0.0001906861,0.0014239707,0.0009378946,0.00026153555,0.00003963638,0.00022456626,0.00023163883,0.00036004052],"category_scores_gemma":[0.0123171685,0.00012610243,0.00023878527,0.0004460207,0.00057141995,0.00025310265,0.00009083602,0.0025385614,0.000035995483],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018273903,0.003606086,0.9462386,0.000042026928,0.00025414643,0.026523713,0.0005354868,0.0000059731256,0.000015452617,0.000007773962,0.0008691839,0.020074219],"study_design_scores_gemma":[0.030314533,0.0070019364,0.95522314,0.00088104076,0.00018997859,0.0032123274,0.0021693737,0.00019267312,0.00001264408,0.0001795127,0.0005370034,0.00008582909],"about_ca_topic_score_codex":0.0045042,"about_ca_topic_score_gemma":0.0026782304,"teacher_disagreement_score":0.028487142,"about_ca_system_score_codex":0.00044834826,"about_ca_system_score_gemma":0.0005196225,"threshold_uncertainty_score":0.9997626},"labels":[],"label_agreement":null},{"id":"W2726486414","doi":"10.4269/ajtmh.17-0258","title":"Occult Amebic Liver Abscess as Cause of Extensive Inferior Vena Cava and Hepatic Vein Thrombosis","year":2017,"lang":"en","type":"article","venue":"American Journal of Tropical Medicine and Hygiene","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Population Health Research Institute; McMaster University","funders":"","keywords":"Medicine; Inferior vena cava; Radiology; Thrombosis; Liver abscess; Abscess; Abdominal pain; Portal vein thrombosis; Surgery","score_opus":0.030010379679337066,"score_gpt":0.33888137480680663,"score_spread":0.30887099512746957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2726486414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995398,0.00089505577,0.000095194475,0.0028546103,0.00013072453,0.00011188746,0.000002828996,0.0000047671138,0.0005069183],"genre_scores_gemma":[0.99565685,0.002981186,0.00058217807,0.00048791044,0.00021371215,0.0000023304622,9.745493e-7,0.000012142737,0.000062721345],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99894756,0.000042493662,0.00041665442,0.00014976984,0.0002693109,0.00017418686],"domain_scores_gemma":[0.99830943,0.00014156464,0.0006326984,0.00026736318,0.00036152673,0.00028740818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008597553,0.00015472926,0.00081688236,0.0001543013,0.00016023323,0.000014818119,0.00008354015,0.00004135906,0.00008012507],"category_scores_gemma":[0.0006967249,0.000095931304,0.00007763329,0.00008387303,0.0013712005,0.0001246105,0.000050574814,0.00021811553,0.0000033084405],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041979417,0.0002935228,0.9227368,0.00009599612,0.00068287866,0.00068887795,0.0012488159,4.158945e-7,0.0015343456,0.00020064066,0.00026410964,0.07183378],"study_design_scores_gemma":[0.0029311113,0.007657673,0.9848163,0.0006047436,0.0008875412,0.0011487944,0.000949893,0.000023137414,0.0002994513,0.00010574927,0.00048973213,0.000085879736],"about_ca_topic_score_codex":0.0015230519,"about_ca_topic_score_gemma":0.000033114287,"teacher_disagreement_score":0.07174791,"about_ca_system_score_codex":0.00003581478,"about_ca_system_score_gemma":0.00008661105,"threshold_uncertainty_score":0.5052246},"labels":[],"label_agreement":null},{"id":"W2731018191","doi":"","title":"THE ROLE OF THE MUCOSAL INNATE IMMUNE RESPONSE IN THE PATHOGENESIS OF ENTAMOEBA HISTOLYTICA","year":2014,"lang":"en","type":"article","venue":"8th Cuban Congress on Microbiology and Parasitology, 5th National Congress on Tropical Medicine and 5th International Symposium on HIV/aids infection in Cuba","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Inflammasome; Entamoeba histolytica; Innate immune system; NLRC4; Biology; Immune system; Microbiology; Extracellular; Cell biology; Entamoeba; Immunology; Caspase 1; Inflammation","score_opus":0.013694143623679206,"score_gpt":0.3173637684584601,"score_spread":0.3036696248347809,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2731018191","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98353857,0.00024055064,0.000020293339,0.010620499,0.0019406826,0.00048629395,0.0000765042,0.000011999006,0.0030646187],"genre_scores_gemma":[0.99775004,0.00037857902,0.000020219055,0.0011158391,0.00015608653,0.00009341238,0.000047544778,0.000012223513,0.0004260651],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973304,0.0010161237,0.00072850083,0.00038757888,0.0002978325,0.00023953064],"domain_scores_gemma":[0.9959448,0.003061874,0.00037067724,0.00026949187,0.00029691568,0.000056270732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009058526,0.0002621376,0.00048107564,0.00036075446,0.000249865,0.000012296646,0.00022630872,0.00026217545,0.00004675914],"category_scores_gemma":[0.0011610967,0.00013915494,0.00010967663,0.00026665954,0.0013126846,0.000046227076,0.000057056135,0.0005495954,0.0000060682382],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0060523045,0.0006660339,0.8762762,0.00002920989,0.00021746458,0.000011788757,0.00017346314,0.00006614848,0.012372989,0.10105074,0.0004557286,0.0026279401],"study_design_scores_gemma":[0.005646385,0.0038726695,0.95434994,0.00040080276,0.00010909679,0.00033906993,0.00013586506,0.0006265261,0.0050841267,0.0014618142,0.027797623,0.00017608487],"about_ca_topic_score_codex":0.00010241278,"about_ca_topic_score_gemma":0.000104745275,"teacher_disagreement_score":0.09958892,"about_ca_system_score_codex":0.00012621217,"about_ca_system_score_gemma":0.00007180725,"threshold_uncertainty_score":0.5674574},"labels":[],"label_agreement":null},{"id":"W2735198534","doi":"","title":"Entamoeba histolytica and Entamoeba dispar, mechanisms of adherence and implications for virulence","year":2000,"lang":"en","type":"dissertation","venue":"Library and Archives Canada (Government of Canada)","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Entamoeba histolytica; Dispar; Virulence; Entamoeba; Microbiology; Biology; Virology; Genetics; Gene","score_opus":0.00425195006681946,"score_gpt":0.18629541394515944,"score_spread":0.18204346387833997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2735198534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7864263,0.0030662431,0.0004514477,0.0023188046,0.0004093238,0.0022105677,0.002950403,0.000023312845,0.2021436],"genre_scores_gemma":[0.9811687,0.0012523803,0.001394737,0.0002313414,0.00002006506,0.000075984295,0.00021637206,0.000024721056,0.015615699],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.99877816,0.000014841365,0.00030029088,0.00028992895,0.00043187215,0.000184899],"domain_scores_gemma":[0.9992434,0.00016169068,0.00020383098,0.00017898428,0.0000018625917,0.00021024678],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000006519011,0.00021206717,0.00037526916,0.000036992446,0.00015758655,0.000008808267,0.00006427853,0.00005536861,0.00005085386],"category_scores_gemma":[0.0000038621924,0.00019689539,0.000034911307,0.000048436992,0.00007582678,0.00011475811,0.000026103065,0.000096877346,1.5018443e-9],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0075848456,0.00062681636,0.101223014,0.006263139,0.0015599568,0.000072492956,0.00066234864,0.0000051361644,0.08834593,0.56478125,0.0021882823,0.22668676],"study_design_scores_gemma":[0.0028425562,0.0012448214,0.8408422,0.001358118,0.001055712,0.00007676722,0.0033722997,0.00038856256,0.115933254,0.020497404,0.01170483,0.000683511],"about_ca_topic_score_codex":0.002506026,"about_ca_topic_score_gemma":0.015879603,"teacher_disagreement_score":0.73961914,"about_ca_system_score_codex":0.000012256916,"about_ca_system_score_gemma":0.001095801,"threshold_uncertainty_score":0.8861191},"labels":[],"label_agreement":null},{"id":"W2749334487","doi":"10.1371/journal.ppat.1006592","title":"The macrophage cytoskeleton acts as a contact sensor upon interaction with Entamoeba histolytica to trigger IL-1β secretion","year":2017,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Entamoeba histolytica; Cytoskeleton; Cell biology; Macrophage; Biology; Inflammasome; Secretion; Intracellular; Microbiology; Inflammation; Biochemistry; Immunology; Cell; In vitro","score_opus":0.019159775360697056,"score_gpt":0.28930479756515415,"score_spread":0.2701450222044571,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2749334487","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9715332,0.0000254807,0.0001894159,0.0019322125,0.00033003505,0.0009322995,0.00004043431,0.00006246796,0.02495449],"genre_scores_gemma":[0.9898987,0.000059071423,0.00027017482,0.00024778675,0.0002294196,0.000114833085,0.000032310967,0.000042419237,0.009105323],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99874806,0.000056806934,0.00021196716,0.0003394797,0.00030459184,0.00033910366],"domain_scores_gemma":[0.9985201,0.000095995674,0.00019537221,0.0007803225,0.00016954666,0.00023870842],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00012757746,0.00022419538,0.00027050322,0.000088245135,0.0009654183,0.00012217877,0.00010122665,0.000095232004,0.00029669414],"category_scores_gemma":[0.0002900786,0.00013744342,0.00011686388,0.00007356646,0.000052731204,0.00015162678,0.00004901941,0.00022472724,0.0012427373],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008247896,0.0026105777,0.051074382,0.00018203039,0.002006988,0.003460434,0.0024858979,0.000012710958,0.8849998,0.001851968,0.0020142002,0.04105309],"study_design_scores_gemma":[0.01546478,0.012936703,0.4073456,0.0014670815,0.0037382445,0.0029674547,0.0020131045,0.0016848997,0.2217368,0.00018239352,0.32905498,0.0014079501],"about_ca_topic_score_codex":0.00014966934,"about_ca_topic_score_gemma":0.00013416441,"teacher_disagreement_score":0.663263,"about_ca_system_score_codex":0.00041202252,"about_ca_system_score_gemma":0.00010252747,"threshold_uncertainty_score":0.9995349},"labels":[],"label_agreement":null},{"id":"W2761174687","doi":"10.1128/mbio.01323-17","title":"<i>Entamoeba histolytica</i> -Induced Mucin Exocytosis Is Mediated by VAMP8 and Is Critical in Mucosal Innate Host Defense","year":2017,"lang":"en","type":"article","venue":"mBio","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Calgary","funders":"Canadian Institutes of Health Research; Crohn's and Colitis Canada; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Entamoeba histolytica; Mucin; Innate immune system; Exocytosis; Cell biology; Host (biology); Immunology; Biology; Lytic cycle; Microbiology; Immune system; Genetics; Virus","score_opus":0.0235568206057652,"score_gpt":0.3084827526004667,"score_spread":0.2849259319947015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761174687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9812608,0.0002572781,0.0000148099725,0.0072565665,0.00019055745,0.00026813612,0.00008742167,0.000046214212,0.0106182275],"genre_scores_gemma":[0.9963002,0.00011092147,0.00014386619,0.0021101101,0.000050089588,0.000031807846,0.000028995491,0.000027199734,0.0011968073],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99879795,0.000029946033,0.00024857518,0.00037762747,0.0001973297,0.0003485567],"domain_scores_gemma":[0.9990324,0.000098952514,0.00006759429,0.00049595005,0.000074772506,0.00023035539],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012371347,0.00020079741,0.00033579793,0.000112091824,0.0002881489,0.000058663012,0.00008477292,0.00017585712,0.0003841586],"category_scores_gemma":[0.00035536967,0.00017451582,0.00006722025,0.000094382754,0.00019954752,0.00013606026,0.000087518565,0.00023291727,0.00021028718],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034528496,0.0019230869,0.8981182,0.00013891558,0.00028281685,0.00085357,0.001530917,8.32251e-9,0.028659755,0.0006524207,0.06079713,0.006697874],"study_design_scores_gemma":[0.022760531,0.0019968478,0.8234545,0.0005080114,0.001046194,0.0005692317,0.0005823576,0.0007854924,0.098046474,0.00074858085,0.048249766,0.0012520041],"about_ca_topic_score_codex":0.0016826042,"about_ca_topic_score_gemma":0.000121170015,"teacher_disagreement_score":0.07466371,"about_ca_system_score_codex":0.00016597797,"about_ca_system_score_gemma":0.00006484078,"threshold_uncertainty_score":0.71165484},"labels":[],"label_agreement":null},{"id":"W2763061388","doi":"10.1038/s41598-017-12875-6","title":"Membrane Trafficking Modulation during Entamoeba Encystation","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Environmental Health Sciences; Natural Sciences and Engineering Research Council of Canada; National Heart, Lung, and Blood Institute; Alberta Innovates; University of Exeter; Wellcome Trust; Ministry of Higher Education and Scientific Research; University of Baghdad; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Entamoeba histolytica; Biology; Endocytic cycle; Cell biology; Endosome; Golgi apparatus; Cyst; Secretion; Entamoeba; Transport protein; Gene; Endocytosis; Microbiology; Genetics; Biochemistry; Intracellular; Pathology; Cell","score_opus":0.017834517887226686,"score_gpt":0.28892430091081717,"score_spread":0.2710897830235905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2763061388","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9846896,0.000011808251,0.00021041563,0.00011340465,0.0040172846,0.00030391637,6.5408375e-7,0.00007611223,0.010576834],"genre_scores_gemma":[0.9906706,0.0000024897877,0.00037707505,0.0000049081104,0.000101516394,0.00001705455,0.000060649356,0.000011354426,0.008754314],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988075,0.000010426671,0.00026832038,0.0004095332,0.00032495274,0.00017927961],"domain_scores_gemma":[0.99859136,0.0000058092787,0.00030475535,0.0008843999,0.00012899088,0.00008465372],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00035887526,0.00009193126,0.00013060585,0.00013362743,0.0014511568,0.00026925118,0.000039749884,0.000046002082,0.00017651464],"category_scores_gemma":[0.0001464808,0.00007900457,0.000079728736,0.00008351694,0.00011830707,0.00034282432,0.00002770497,0.00006405921,0.000040668514],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073942276,0.00065472483,0.6484853,0.00019620378,0.00018928679,0.0038103228,0.0015390086,0.00071503763,0.31159014,0.000256325,0.0008443367,0.031645376],"study_design_scores_gemma":[0.0009918152,0.000049549562,0.91190565,0.00014593801,0.0001186812,0.0018893509,0.00009060898,0.002280833,0.07854059,0.0009072521,0.0029015844,0.000178168],"about_ca_topic_score_codex":0.000065894266,"about_ca_topic_score_gemma":0.00002266303,"teacher_disagreement_score":0.2634203,"about_ca_system_score_codex":0.000096902935,"about_ca_system_score_gemma":0.0000703014,"threshold_uncertainty_score":0.99984884},"labels":[],"label_agreement":null},{"id":"W2764086226","doi":"10.14740/jocmr3184w","title":"Newly Diagnosed Idiopathic Liver Abscess: Colonoscopy Required!","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Medicine Research","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Liver abscess; Occult; Malignancy; Abscess; Colonoscopy; Colorectal cancer; Metastasis; Concomitant; Hepatic abscess; General surgery; Gastroenterology; Surgery; Radiology; Internal medicine; Cancer; Pathology","score_opus":0.3658407869309578,"score_gpt":0.5950998113906125,"score_spread":0.22925902445965474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2764086226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9453214,0.0027123315,0.00016623821,0.020582777,0.0019016765,0.0004392216,0.0000017874283,0.0000146843,0.028859885],"genre_scores_gemma":[0.9843353,0.006910802,0.00052262517,0.00031771068,0.0056844507,0.000008909061,0.0000012018573,0.000025501386,0.0021934886],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99537027,0.00055682304,0.0017024631,0.00026726275,0.0016289904,0.0004742156],"domain_scores_gemma":[0.99285215,0.0023500435,0.0010440617,0.00088910334,0.0020356195,0.0008290327],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.012734769,0.00016122764,0.0011745406,0.00037243008,0.0006074528,0.000054703698,0.00049395155,0.00027950626,0.0006281014],"category_scores_gemma":[0.036022875,0.00009674904,0.0003351584,0.00019391722,0.001632167,0.00027432572,0.00015523494,0.0021156485,0.00022388349],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007264917,0.0029424839,0.74956673,0.00030318167,0.0009734261,0.018118557,0.00047607304,0.0000012581015,0.00040319815,0.0010506468,0.053218037,0.16568145],"study_design_scores_gemma":[0.022926116,0.024346907,0.8934998,0.004094605,0.00043584825,0.0011506833,0.00038459385,0.0001256894,0.00029080504,0.0024148908,0.050180178,0.00014988738],"about_ca_topic_score_codex":0.000319771,"about_ca_topic_score_gemma":0.000028580154,"teacher_disagreement_score":0.16553158,"about_ca_system_score_codex":0.00013157047,"about_ca_system_score_gemma":0.0010142721,"threshold_uncertainty_score":0.9720971},"labels":[],"label_agreement":null},{"id":"W2770168448","doi":"10.1016/j.revmed.2017.10.277","title":"Fièvre prolongée : penser aux calculs biliaires perdus","year":2017,"lang":"fr","type":"article","venue":"La Revue de Médecine Interne","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Medicine; Gynecology","score_opus":0.025537228892460007,"score_gpt":0.3371390152023809,"score_spread":0.31160178630992086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770168448","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86915416,0.0046739588,0.00035534665,0.031259634,0.003988735,0.0006830045,0.00007196777,0.00009454967,0.08971865],"genre_scores_gemma":[0.76564425,0.0003667407,0.00036351415,0.00027188341,0.0023538354,0.000078957244,0.000023607605,0.00006447818,0.23083271],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99792403,0.00011860015,0.00046594912,0.0005613387,0.00019708635,0.0007329887],"domain_scores_gemma":[0.99754065,0.00018009826,0.00028663405,0.00145248,0.00017768066,0.0003624326],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00036974152,0.000408138,0.0006225999,0.0001315796,0.0004343541,0.000194245,0.00040091417,0.0003882762,0.0036170124],"category_scores_gemma":[0.00089641364,0.0003574802,0.00034215263,0.000083163104,0.00050032185,0.00024311346,0.00027644378,0.0005955052,0.0017855339],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028442265,0.0015419595,0.9161006,0.0004652221,0.0007011265,0.004604383,0.0007676612,0.0000101713285,0.00036515103,0.011391681,0.013553808,0.050213784],"study_design_scores_gemma":[0.004627872,0.00088533433,0.8361359,0.0027195758,0.00072209106,0.0032183495,0.00014079952,0.0014780422,0.0008305148,0.0010581174,0.14783652,0.0003468421],"about_ca_topic_score_codex":0.0046385573,"about_ca_topic_score_gemma":0.0009419387,"teacher_disagreement_score":0.14111407,"about_ca_system_score_codex":0.00039418237,"about_ca_system_score_gemma":0.00023434754,"threshold_uncertainty_score":0.9998877},"labels":[],"label_agreement":null},{"id":"W2773300519","doi":"10.15698/mic2017.12.605","title":"VAMP8 mucin exocytosis attenuates intestinal pathogenesis by Entamoeba histolytica","year":2017,"lang":"en","type":"letter","venue":"Microbial Cell","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Crohn's and Colitis Canada; University of Calgary","keywords":"Secretion; Mucus; Exocytosis; Biology; Cell biology; Intestinal mucosa; Entamoeba histolytica; Microbiology; Mucin; Immune system; Goblet cell; Intestinal epithelium; Immunology; Epithelium; Biochemistry; Medicine","score_opus":0.014717011458284638,"score_gpt":0.23768756055288762,"score_spread":0.22297054909460298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2773300519","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20771316,0.006373592,0.0007750927,0.6262335,0.008013007,0.005213013,0.0043197093,0.0010790481,0.14027986],"genre_scores_gemma":[0.095992915,0.00039276268,0.004201419,0.38607156,0.010073071,0.0002602614,0.012156934,0.0006306616,0.4902204],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99776024,0.00007290539,0.0004407268,0.0007980663,0.00026724208,0.00066081673],"domain_scores_gemma":[0.99818754,0.00009331642,0.00037746422,0.0010295089,0.0001667274,0.00014541979],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000103004146,0.00063102745,0.0008274447,0.00015888085,0.00041018595,0.000092138594,0.00029852655,0.00082513434,0.0013792852],"category_scores_gemma":[0.000056839148,0.00056064804,0.0004593853,0.00008301621,0.00025780822,0.0000636477,0.00014251625,0.0011968914,0.0018223552],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042925967,0.0002869964,0.0016253246,0.00026857105,0.00015575509,0.0018083836,0.000036599344,5.576162e-8,0.0635899,3.3005804e-7,0.9310253,0.0011598427],"study_design_scores_gemma":[0.0016114471,0.00033114292,0.00024058648,0.00028357477,0.0011852962,0.00074794714,0.0000063701327,0.0000031943403,0.032894447,0.000007713342,0.9621948,0.0004934598],"about_ca_topic_score_codex":0.00085947075,"about_ca_topic_score_gemma":0.000016011803,"teacher_disagreement_score":0.34994054,"about_ca_system_score_codex":0.00063113304,"about_ca_system_score_gemma":0.00026867507,"threshold_uncertainty_score":0.9996845},"labels":[],"label_agreement":null},{"id":"W2774667611","doi":"10.4103/eus.eus_17_17","title":"Large liver abscess after endoscopic ultrasound-guided fiducial placement","year":2017,"lang":"en","type":"letter","venue":"Endoscopic Ultrasound","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Medicine; Fiducial marker; Liver abscess; Abscess; Endoscopic ultrasound; Radiology; Percutaneous; Surgery","score_opus":0.021218294351730595,"score_gpt":0.2942718943910715,"score_spread":0.27305360003934087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2774667611","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6309676,0.0076525193,0.0011680734,0.07112691,0.021478558,0.011300966,0.003860214,0.0014855232,0.25095963],"genre_scores_gemma":[0.68949306,0.00089371717,0.0012213712,0.15424472,0.017480144,0.0014238721,0.0041524307,0.00034328894,0.13074742],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99491733,0.00017758255,0.00086013775,0.0013999598,0.001092399,0.001552596],"domain_scores_gemma":[0.9960063,0.0007038741,0.0005671703,0.0022176525,0.00021548565,0.00028948465],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.00026088033,0.0011678492,0.0014167209,0.00039895705,0.00079912465,0.00034207007,0.0005169161,0.0014060471,0.012641099],"category_scores_gemma":[0.00047367686,0.0010178933,0.00060126523,0.00016190455,0.00033615273,0.00023521177,0.00014001176,0.0024959438,0.0024080647],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009748269,0.0005900696,0.06125576,0.0007559581,0.001500909,0.00534912,0.00074784615,8.043691e-7,0.0002137142,0.000044948607,0.92936677,0.00007663439],"study_design_scores_gemma":[0.0069552963,0.0004828767,0.047726344,0.0009403758,0.0016256587,0.0013107168,0.00006669183,0.0000017857184,0.00073459087,0.00011584811,0.9392744,0.0007654297],"about_ca_topic_score_codex":0.0006196497,"about_ca_topic_score_gemma":0.00015418323,"teacher_disagreement_score":0.12021222,"about_ca_system_score_codex":0.00079184974,"about_ca_system_score_gemma":0.0005910123,"threshold_uncertainty_score":0.9998903},"labels":[],"label_agreement":null},{"id":"W2780057620","doi":"","title":"Uitbraak van amoebiasis in een Nederlands gezin; tropen onverwacht dichtbij","year":2005,"lang":"nl","type":"article","venue":"Data Archiving and Networked Services (DANS)","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Amoebiasis; Dermatology; Immunology","score_opus":0.01863562474958256,"score_gpt":0.2764166104296212,"score_spread":0.2577809856800386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2780057620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9579029,0.0037769612,0.00060755835,0.000893719,0.00047762756,0.00084885163,0.0009234881,0.0001431108,0.034425803],"genre_scores_gemma":[0.9827936,0.0043361005,0.0011174406,0.00080345175,0.0017011282,0.00003687926,0.0042421627,0.0000993292,0.0048698606],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99593765,0.00036392358,0.0008456497,0.0012885967,0.00041915444,0.0011450187],"domain_scores_gemma":[0.9968349,0.00041065353,0.0002824885,0.0019387337,0.00003850497,0.0004947412],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000774381,0.0006788405,0.0009150915,0.0003255177,0.0005844618,0.00023524504,0.0010525152,0.00022401166,0.0006342188],"category_scores_gemma":[0.000023478431,0.00057554705,0.000117903146,0.00058540195,0.00019072377,0.0008567117,0.0012895953,0.00074340694,0.0007473834],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000567881,0.0010534443,0.84739214,0.00053853035,0.00087442494,0.00024668267,0.0056634294,0.0008368671,0.00010510893,0.00009803269,0.0025865664,0.14003687],"study_design_scores_gemma":[0.005199415,0.00044723687,0.6900047,0.0021338821,0.000980047,0.00015476585,0.0018096642,0.23273614,0.00002363308,0.00013767299,0.06562757,0.0007452519],"about_ca_topic_score_codex":0.0064374055,"about_ca_topic_score_gemma":0.018375216,"teacher_disagreement_score":0.23189926,"about_ca_system_score_codex":0.00017013191,"about_ca_system_score_gemma":0.000124876,"threshold_uncertainty_score":0.9996696},"labels":[],"label_agreement":null},{"id":"W2781679485","doi":"10.14740/gr884w","title":"Colon Carcinoma Presenting as <i>Streptococcus anginosus</i> Bacteremia and Liver Abscess","year":2017,"lang":"en","type":"article","venue":"Gastroenterology Research","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Streptococcus anginosus; Medicine; Pyogenic liver abscess; Liver abscess; Bacteremia; Abscess; Streptococcus intermedius; Etiology; Pathology; Internal medicine; Gastroenterology; Streptococcus; Surgery; Microbiology; Antibiotics; Biology; Bacteria","score_opus":0.05775745171049526,"score_gpt":0.3874670148045531,"score_spread":0.32970956309405786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2781679485","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868607,0.00006435845,0.000008381237,0.0010445092,0.00011661605,0.0005686924,0.000008725286,0.000028185566,0.011299843],"genre_scores_gemma":[0.9966848,0.000053870797,0.00009885786,0.00010854004,0.00017966166,0.00009831457,0.000015103667,0.000019472212,0.0027414118],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983137,0.00014518706,0.00016574883,0.00040159863,0.00026772197,0.0007060279],"domain_scores_gemma":[0.9987397,0.000071203016,0.000079737074,0.0006529751,0.00022953872,0.00022680708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042531744,0.00014049138,0.00025581036,0.0001877719,0.0009028299,0.000106155094,0.00018454349,0.00012440825,0.0002509026],"category_scores_gemma":[0.00018834487,0.000119286866,0.00006529713,0.00004576085,0.000646863,0.00014317116,0.00042063202,0.00049324887,0.00015678418],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004308339,0.00015908104,0.9945419,0.000048416383,0.00009485677,0.0008475887,0.00013040857,1.10072264e-7,0.001311513,0.00004781871,0.0013977339,0.000989733],"study_design_scores_gemma":[0.00237195,0.0007580525,0.9940632,0.000036191464,0.000045427307,0.00070458587,0.00006757995,0.000072637195,0.00088608544,0.00005920484,0.000888639,0.000046433015],"about_ca_topic_score_codex":0.0007188862,"about_ca_topic_score_gemma":0.00017746711,"teacher_disagreement_score":0.0098240785,"about_ca_system_score_codex":0.00007511099,"about_ca_system_score_gemma":0.000068056324,"threshold_uncertainty_score":0.6943929},"labels":[],"label_agreement":null},{"id":"W2788030392","doi":"10.3138/jammi.2.2.07","title":"A 63-year-old man with invasive amoebiasis mimicking pulmonary tuberculosis","year":2018,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Amoebiasis; Tuberculosis; Pulmonary tuberculosis; Medicine; Pathology; Immunology","score_opus":0.003718744121807263,"score_gpt":0.21071774668306945,"score_spread":0.2069990025612622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788030392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918956,0.00014588879,0.000009881532,0.006783124,0.00041426948,0.00011991952,0.000027029233,0.0000044136345,0.0005998488],"genre_scores_gemma":[0.997199,0.00014885113,0.000015230953,0.0021544541,0.0002233837,0.0000024782953,0.000005709874,0.000007786817,0.0002430919],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99902487,0.00013264488,0.0003069352,0.000101380036,0.0002749798,0.000159214],"domain_scores_gemma":[0.9985597,0.00020486707,0.000496832,0.000110058,0.00039843775,0.00023009535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000331787,0.000102054495,0.00027936194,0.00007126798,0.0001639794,0.000006040544,0.00008110434,0.00012868646,0.0001765176],"category_scores_gemma":[0.00095532497,0.000060029623,0.00010256741,0.00014306494,0.00016481947,0.000046642366,0.000041397623,0.00026206998,0.0000011015819],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019833377,0.00019226522,0.98905236,0.000039243983,0.00086459616,0.0000698067,0.00004170582,0.0000015079905,0.0006860338,0.000076707795,0.008107421,0.0006700495],"study_design_scores_gemma":[0.0029545003,0.0006740308,0.98495084,0.00052061275,0.0010628043,0.0013279575,0.00011204599,0.00001361226,0.0015349984,0.00015702732,0.006569554,0.00012200318],"about_ca_topic_score_codex":0.019634455,"about_ca_topic_score_gemma":0.0681873,"teacher_disagreement_score":0.048552837,"about_ca_system_score_codex":0.0005068005,"about_ca_system_score_gemma":0.0015299007,"threshold_uncertainty_score":0.9868939},"labels":[],"label_agreement":null},{"id":"W2788916745","doi":"10.3138/jammi.2.2.01","title":"Superiority of PCR against microscopy for diagnosing <i>Entamoeba histolytica</i> in liver abscess samples","year":2018,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"","keywords":"Entamoeba histolytica; Serology; Liver abscess; Polymerase chain reaction; Amoebic liver abscess; Microscopy; Biology; Pathology; Microbiology; Molecular biology; Abscess; Medicine; Immunology; Gene; Antibody; Biochemistry; Genetics","score_opus":0.0072188321210581935,"score_gpt":0.253032061955261,"score_spread":0.2458132298342028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788916745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99637306,0.00055386435,0.0000503766,0.001965986,0.00071186473,0.00017337981,0.000090965,0.0000018242049,0.00007868288],"genre_scores_gemma":[0.9984945,0.00029990033,0.000037986945,0.0009777541,0.00013516376,0.0000030084805,0.000008100677,0.000005268811,0.000038294296],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99909544,0.00009651699,0.00042761117,0.00008271739,0.00015828245,0.00013943593],"domain_scores_gemma":[0.9985839,0.0003943199,0.0004823372,0.00007955935,0.00032859872,0.00013126119],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004514026,0.000080269645,0.00032944427,0.000066249326,0.00009013634,0.0000031765906,0.000075595926,0.00012165326,0.000041733358],"category_scores_gemma":[0.0016684537,0.000055098542,0.00011147971,0.00010241636,0.00018718059,0.00003622067,0.000029667377,0.00016909686,1.4954857e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018716924,0.00029373844,0.9880329,0.00009228323,0.00021251272,0.000010918179,0.00006626911,0.0000014363532,0.0043725236,0.00006697161,0.005897937,0.00076534285],"study_design_scores_gemma":[0.005720646,0.00047827445,0.9648821,0.0005700693,0.00046922304,0.00010853657,0.000073182,0.00004301681,0.007917372,0.00014624048,0.019483462,0.00010791123],"about_ca_topic_score_codex":0.018405862,"about_ca_topic_score_gemma":0.09701047,"teacher_disagreement_score":0.07860461,"about_ca_system_score_codex":0.00058356876,"about_ca_system_score_gemma":0.0013842882,"threshold_uncertainty_score":0.9881306},"labels":[],"label_agreement":null},{"id":"W2791031266","doi":"10.1007/978-3-319-68493-2_2","title":"Human Amebiasis: Insight into the Biology and Immunopathogenesis","year":2017,"lang":"en","type":"book-chapter","venue":"Neglected tropical diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Entamoeba histolytica; Dispar; Dysentery; Entamoeba; Amoebiasis; Biology; Disease; Malaria; Diarrhea; Immunology; Microbiology; Virology; Medicine; Pathology","score_opus":0.01609849645902067,"score_gpt":0.2879698539902363,"score_spread":0.2718713575312156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791031266","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20271167,0.06276718,0.000068753194,0.0025643788,0.00088962866,0.0026825722,0.00045582146,0.0006104844,0.7272495],"genre_scores_gemma":[0.9041048,0.0019064001,0.000050014936,0.00034290785,0.00054471573,0.00009164821,0.0003205682,0.000073760944,0.092565134],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9989349,0.000038234688,0.00024845256,0.00042343687,0.00014111208,0.00021386737],"domain_scores_gemma":[0.9987323,0.0000676572,0.0001550251,0.00073359645,0.00011911958,0.00019230158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000003953589,0.0003460835,0.00052459363,0.00012001807,0.0007191291,0.000051003397,0.00012995058,0.00031478505,0.00053571136],"category_scores_gemma":[0.00010944393,0.0002095878,0.00023246395,0.00001873321,0.00059919746,0.000034732824,0.00011907134,0.00029570484,0.000086865024],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011639667,0.0017824433,0.20962343,0.0006619462,0.0081201475,0.0017267263,0.00072689535,3.0532357e-7,0.00793524,0.37266365,0.0048013707,0.39079386],"study_design_scores_gemma":[0.0013576566,0.0007144828,0.8431557,0.00027509299,0.0022069172,0.000057830486,0.0000047318126,0.0000019944669,0.000022069064,0.016474321,0.13546644,0.00026276312],"about_ca_topic_score_codex":0.00012692936,"about_ca_topic_score_gemma":0.00006548652,"teacher_disagreement_score":0.7013932,"about_ca_system_score_codex":0.0000856187,"about_ca_system_score_gemma":0.00011589839,"threshold_uncertainty_score":0.8546742},"labels":[],"label_agreement":null},{"id":"W2793604609","doi":"10.1093/jcag/gwy008.298","title":"A297 GOBLET CELLS AND INTESTINAL TREFOIL FACTOR PLAY CRITICAL ROLES IN INNATE PROTECTION AGAINST CLOSTRIDIUM DIFFICILT COLITIS AND MEDIATE RECOVERY FOLLOWING CDIF COLITIS.","year":2018,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Colitis; Goblet cell; Mucin; Mucin 2; Inflammatory bowel disease; Mucus; Immunology; Biology; Inflammation; Clostridium difficile toxin A; Intestinal mucosa; Pathology; Medicine; Microbiology; Internal medicine; Epithelium; Clostridium difficile; Disease; Gene expression","score_opus":0.008783330135808612,"score_gpt":0.23451431027108632,"score_spread":0.2257309801352777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793604609","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898101,0.000011556873,0.000028524495,0.009136315,0.00061282294,0.00018553813,0.00007260097,0.0000032413927,0.00013929726],"genre_scores_gemma":[0.9988134,0.00003444739,0.00012016608,0.000759612,0.00016358827,0.00000494418,0.0000027261437,0.0000103120165,0.00009078908],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987031,0.00024884986,0.0004375757,0.00011470838,0.00018550889,0.00031020748],"domain_scores_gemma":[0.9989392,0.00010890859,0.00040488565,0.00007328084,0.00025627212,0.00021741567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045404653,0.00011211569,0.00035172852,0.00030236924,0.00012798366,0.000021542337,0.000052326614,0.00013217957,0.00001730636],"category_scores_gemma":[0.0008189363,0.00008876961,0.00009511389,0.00010293226,0.000119256736,0.00010017796,0.000022824344,0.00031724136,0.0000012414697],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006972682,0.00011041333,0.9952128,0.000027442758,0.00025617963,0.000085693835,0.00032019854,0.0000058404576,0.0015554992,0.000024064411,0.00071507745,0.0009895465],"study_design_scores_gemma":[0.0035276425,0.0027251507,0.9911738,0.00025184063,0.00013935106,0.00030530873,0.00010120838,0.00011312866,0.0008893571,0.00016003007,0.00055601675,0.000057132154],"about_ca_topic_score_codex":0.0040668976,"about_ca_topic_score_gemma":0.26973227,"teacher_disagreement_score":0.26566538,"about_ca_system_score_codex":0.0011664322,"about_ca_system_score_gemma":0.00027822674,"threshold_uncertainty_score":0.7435932},"labels":[],"label_agreement":null},{"id":"W2793948016","doi":"10.14745/ccdr.v42i02a01","title":"Are enteric infections sexually transmitted in British Columbia?","year":2016,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; Burnaby Hospital; Simon Fraser University","funders":"","keywords":"Shigellosis; Epidemiology; Transmission (telecommunications); Shigella; Men who have sex with men; Outbreak; Medicine; Sexual transmission; Demography; Immunology; Virology; Internal medicine; Biology; Syphilis; Human immunodeficiency virus (HIV)","score_opus":0.011526938312570135,"score_gpt":0.24073346727713796,"score_spread":0.22920652896456783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793948016","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941359,0.00036933186,0.000046673107,0.000799541,0.0001514118,0.00035846516,0.00009449642,0.00006435494,0.00397979],"genre_scores_gemma":[0.98911786,0.00012817355,0.000030206633,0.00039987455,0.000022449913,0.00013451307,0.00007379012,0.000023894689,0.0100692315],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988483,0.00006386531,0.00035854275,0.00022707685,0.0002278666,0.00027432115],"domain_scores_gemma":[0.99842554,0.00006958103,0.00014044694,0.00086228515,0.00012976953,0.0003723963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000101551625,0.00009827021,0.00028274962,0.000044642067,0.00020470591,0.00004065327,0.00008608076,0.00004367601,0.00066076015],"category_scores_gemma":[0.00024361766,0.00011524251,0.00007876322,0.0002665917,0.00007327242,0.00008395645,0.000046485286,0.00013007382,0.0000047561807],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012998228,0.000499341,0.97486633,0.00003108981,0.000092193244,0.013742801,0.000003941665,0.0000017006834,0.000015432257,0.0000019222932,0.007782358,0.0029498984],"study_design_scores_gemma":[0.0013978742,0.000034597662,0.94056976,0.0003724626,0.00009608023,0.0013974849,0.000066696055,0.000010979033,0.000002430536,0.00004595847,0.055878427,0.00012726116],"about_ca_topic_score_codex":0.9199371,"about_ca_topic_score_gemma":0.99623287,"teacher_disagreement_score":0.07629579,"about_ca_system_score_codex":0.0007000205,"about_ca_system_score_gemma":0.0018408134,"threshold_uncertainty_score":0.723486},"labels":[],"label_agreement":null},{"id":"W2796897052","doi":"10.1503/cmaj.171344","title":"Hypervirulent (hypermucoviscous) <i>Klebsiella pneumoniae</i> causing pyogenic liver abscess","year":2018,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Klebsiella pneumoniae; Medicine; Pyogenic liver abscess; Vietnamese; Alanine transaminase; Abdominal pain; Emergency department; Klebsiella; Liver abscess; Aspartate transaminase; Internal medicine; Gastroenterology; Abscess; Surgery; Biology; Nursing; Escherichia coli","score_opus":0.010058829524926252,"score_gpt":0.24972153751564513,"score_spread":0.23966270799071887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796897052","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95215726,0.00037677787,0.00021058935,0.013730552,0.0018469878,0.00019695383,0.000020346217,0.000047573183,0.031412985],"genre_scores_gemma":[0.9817426,0.00026784645,0.00012709679,0.011555214,0.003549731,0.000005281284,0.000009633582,0.000027979639,0.0027145864],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99774337,0.00008737006,0.00036467993,0.00019127528,0.0010456664,0.00056763133],"domain_scores_gemma":[0.9973377,0.00006784273,0.00016169832,0.00014752436,0.0005929138,0.0016923003],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0006987838,0.00015344836,0.0002555636,0.00020544187,0.0006042171,0.00008071771,0.00008739895,0.0003483182,0.007824809],"category_scores_gemma":[0.00048290557,0.00013019903,0.00014979034,0.00026600104,0.000082914,0.00011275911,0.000017912465,0.000660889,0.0012906198],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007197712,0.00054527016,0.58159107,0.000050616578,0.0017341563,0.01272701,0.0014701161,0.0000054068987,0.0006024943,0.00042590822,0.25984374,0.14093222],"study_design_scores_gemma":[0.0037276638,0.00049411436,0.10164016,0.00027404376,0.0004067221,0.016312951,0.0003779606,0.0012395774,0.0002657784,0.00012854113,0.87472415,0.0004083645],"about_ca_topic_score_codex":0.0048200884,"about_ca_topic_score_gemma":0.022493405,"teacher_disagreement_score":0.6148804,"about_ca_system_score_codex":0.0017301242,"about_ca_system_score_gemma":0.0028643694,"threshold_uncertainty_score":0.999487},"labels":[],"label_agreement":null},{"id":"W2802533205","doi":"10.1128/iai.00208-18","title":"Entamoeba histolytica Alters Ileal Paneth Cell Functions in Intact and Muc2 Mucin Deficiency","year":2018,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Cancer Institute; Government of Canada; National Institutes of Health; Alberta Livestock and Meat Agency; Crohn's and Colitis Canada; Center of Innovation Program; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Paneth cell; Entamoeba histolytica; Mucin 2; Mucin; Biology; Goblet cell; Secretion; Microbiology; Defensin; Mucus; Lysozyme; Ileum; Biochemistry; Gene expression; Small intestine; Epithelium; Antimicrobial; Gene","score_opus":0.013960055920581688,"score_gpt":0.264779965105281,"score_spread":0.2508199091846993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2802533205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96132445,0.00011936675,0.00032220464,0.000089403,0.0003212609,0.00020519234,0.000003879248,0.000054463188,0.037559777],"genre_scores_gemma":[0.9986023,0.0001757121,0.00006552868,0.00016472851,0.000058019,0.000015625263,0.000018636307,0.00000986034,0.0008896063],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99933213,0.00007119526,0.00017704094,0.00017406787,0.000071953604,0.00017361593],"domain_scores_gemma":[0.9995713,0.00004686552,0.00004812563,0.00017848799,0.00006114243,0.000094028794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016259363,0.00012212044,0.00015876476,0.00022165646,0.00032565452,0.000020771728,0.000016014897,0.0000802928,0.00034127678],"category_scores_gemma":[0.000046878828,0.000106282256,0.000035287314,0.00023723984,0.00019782751,0.000119854674,0.000037599617,0.00023844262,0.00006649069],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014403301,0.0011039446,0.96822613,0.00006494386,0.000039091614,0.000010506835,0.0011781616,0.0000014143505,0.0029672296,0.00020874989,0.0006040532,0.02545176],"study_design_scores_gemma":[0.0020343775,0.0013639804,0.9818776,0.000041140644,0.0000913424,0.0002205226,0.00036240616,0.00022154655,0.0010572443,0.00010625786,0.012487795,0.00013574715],"about_ca_topic_score_codex":0.0060463524,"about_ca_topic_score_gemma":0.00065538747,"teacher_disagreement_score":0.03727783,"about_ca_system_score_codex":0.00013881119,"about_ca_system_score_gemma":0.000046383895,"threshold_uncertainty_score":0.9140317},"labels":[],"label_agreement":null},{"id":"W2806989391","doi":"10.14740/gr1006w","title":"Denture-Associated Oral Microbiome and Periodontal Disease Causing an Anaerobic Pyogenic Liver Abscess in an Immunocompetent Patient: A Case report and Review of the Literature","year":2018,"lang":"en","type":"article","venue":"Gastroenterology Research","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Fusobacterium nucleatum; Medicine; Liver abscess; Fusobacterium; Anaerobic exercise; Periodontal disease; Disease; Endocarditis; Stomatitis; Anaerobic infection; Gastroenterology; Abscess; Bacteroides; Internal medicine; Surgery; Periodontitis; Porphyromonas gingivalis; Physiology; Bacteria","score_opus":0.02821998135611773,"score_gpt":0.346102315209433,"score_spread":0.31788233385331527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806989391","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99418837,0.0047734734,0.00000102278,0.00020172,0.00006623053,0.00071423326,0.00003726951,0.000008658498,0.000008999175],"genre_scores_gemma":[0.99877644,0.0007170129,0.000081505714,0.0002289404,0.000025241852,0.000035418183,0.00008433346,0.0000142859535,0.000036843234],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981934,0.00059054984,0.00030196935,0.00034923467,0.00018113972,0.00038373933],"domain_scores_gemma":[0.9989156,0.000017184351,0.000100371864,0.0004015322,0.00038072324,0.0001845793],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005770897,0.00013505472,0.00029605202,0.00019708021,0.00023578171,0.000028997785,0.00005801393,0.00007665239,0.00003034202],"category_scores_gemma":[0.00008803296,0.00009173199,0.000057970567,0.00030878952,0.00059406954,0.00012381034,0.0001828649,0.00034703995,9.290709e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006340004,0.0007148814,0.9680748,0.0004070485,0.00010485193,0.026419157,0.0011196161,8.755873e-8,0.0019107867,0.0000027613016,0.000039599676,0.0005724021],"study_design_scores_gemma":[0.0016540216,0.0018851457,0.9401767,0.0019861294,0.00010564857,0.053834535,0.00017131554,0.000053727075,0.000050881405,0.0000058463766,0.00002369107,0.000052311767],"about_ca_topic_score_codex":0.0005652832,"about_ca_topic_score_gemma":0.003601489,"teacher_disagreement_score":0.02789806,"about_ca_system_score_codex":0.0001284194,"about_ca_system_score_gemma":0.00008553519,"threshold_uncertainty_score":0.3740722},"labels":[],"label_agreement":null},{"id":"W2822247041","doi":"10.1017/cem.2018.408","title":"Unexpected source of fever: Liver abscess on point-of-care ultrasound","year":2018,"lang":"en","type":"article","venue":"Canadian Journal of Emergency Medicine","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Point of care; Point of care ultrasound; Liver abscess; Content (measure theory); Abscess; Ultrasound; Pathology; Radiology; Surgery","score_opus":0.044336143941419555,"score_gpt":0.32361871420760957,"score_spread":0.27928257026619,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2822247041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96419543,0.00243371,0.000243488,0.00056134776,0.0037601723,0.0001842893,0.000015813654,0.0000058283717,0.028599935],"genre_scores_gemma":[0.99701995,0.00023149158,0.00010469399,0.00009953123,0.0010412717,0.0000010860798,0.000010429874,0.000020757516,0.0014708139],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998619,0.000038936923,0.00069327117,0.00011966131,0.00029234687,0.00023673763],"domain_scores_gemma":[0.99748856,0.00005801575,0.00043873527,0.00024690962,0.0012068936,0.0005608598],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016959899,0.00015259768,0.0004686671,0.00050131266,0.000096170734,0.0000010502259,0.000116600284,0.00008409946,0.01026169],"category_scores_gemma":[0.0005502914,0.00010889471,0.00015117326,0.00035349146,0.00028239406,0.000057672172,0.0000043578666,0.00019266675,0.000021035761],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011187779,0.0006496835,0.7332148,0.0008913693,0.002839676,0.00091387314,0.034951262,0.000035772526,0.014103703,0.0020894262,0.19431384,0.014877818],"study_design_scores_gemma":[0.014521725,0.029367166,0.70747554,0.0062605594,0.003167505,0.0011947636,0.019689117,0.00005020669,0.018522942,0.00052725384,0.19851309,0.0007101234],"about_ca_topic_score_codex":0.010944669,"about_ca_topic_score_gemma":0.008130755,"teacher_disagreement_score":0.03282451,"about_ca_system_score_codex":0.00015862648,"about_ca_system_score_gemma":0.0005941491,"threshold_uncertainty_score":0.9956415},"labels":[],"label_agreement":null},{"id":"W2884360229","doi":"10.1016/j.jss.2018.06.062","title":"Does Imaging Before Percutaneous Drain Removal Affect Rates of Intra-abdominal Abscess Recurrence?","year":2018,"lang":"en","type":"article","venue":"Journal of Surgical Research","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Medicine; Interquartile range; Odds ratio; Abscess; Percutaneous; Confidence interval; Surgery; Retrospective cohort study; Radiology; Internal medicine","score_opus":0.04618165741563675,"score_gpt":0.43220278038762655,"score_spread":0.3860211229719898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2884360229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893788,0.00034084715,0.00004494834,0.0023005526,0.0003237406,0.00018584415,0.0000057318216,0.0000060914895,0.0074134246],"genre_scores_gemma":[0.99704546,0.0002980251,0.00081806554,0.00001290114,0.00093102135,0.0000019270067,0.0000018917237,0.0000146023995,0.00087610475],"study_design_codex":"design_other","study_design_gemma":"case_report","domain_scores_codex":[0.9976085,0.00027662842,0.0004981805,0.00017002063,0.0010321509,0.00041450854],"domain_scores_gemma":[0.9971303,0.00066580274,0.00017326731,0.00019260176,0.0015569325,0.0002811144],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0024562418,0.00012400578,0.0004418742,0.00043094924,0.00018756099,0.000037927286,0.00015454016,0.00007840279,0.0010705261],"category_scores_gemma":[0.00074516394,0.000060967006,0.00021755925,0.00048297975,0.0007437837,0.00013091652,0.000068235524,0.0007333351,0.000039749935],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013364008,0.0029180245,0.25634545,0.0005611138,0.00100895,0.081739955,0.0028496261,0.0000032690352,0.017020658,0.0013917864,0.006307894,0.6164893],"study_design_scores_gemma":[0.029330332,0.03993278,0.17653346,0.010626177,0.0010762548,0.46415612,0.008555678,0.004501847,0.08539562,0.030804342,0.14789917,0.0011882033],"about_ca_topic_score_codex":0.00007438324,"about_ca_topic_score_gemma":0.000017009857,"teacher_disagreement_score":0.6153011,"about_ca_system_score_codex":0.0001841564,"about_ca_system_score_gemma":0.0003791708,"threshold_uncertainty_score":0.99984264},"labels":[],"label_agreement":null},{"id":"W2890777023","doi":"10.1128/iai.00564-18","title":"Correction for Cobo et al., “Entamoeba histolytica Alters Ileal Paneth Cell Functions in Intact and Muc2 Mucin Deficiency”","year":2018,"lang":"en","type":"erratum","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Entamoeba histolytica; Biology; Mucin; Mucin 2; Entamoeba; Microbiology; Genetics; Biochemistry; Gene; Gene expression","score_opus":0.01827942230275718,"score_gpt":0.2923474741063175,"score_spread":0.2740680518035603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2890777023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57413304,0.002818347,0.006731891,0.0018776751,0.10280961,0.0050758226,0.00032672266,0.000599931,0.30562696],"genre_scores_gemma":[0.8606449,0.0046553607,0.00015336412,0.002245574,0.0005072101,0.00034312194,0.0023328674,0.00011078906,0.12900682],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984616,0.00017313537,0.00041669584,0.00045974084,0.0001607435,0.00032810387],"domain_scores_gemma":[0.9988929,0.00018844153,0.00022874212,0.00034471048,0.00019881099,0.0001463861],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00045010584,0.00037345602,0.0005113742,0.00057700416,0.0005453482,0.00006273855,0.00003758513,0.0004155266,0.00018928811],"category_scores_gemma":[0.00020816758,0.00034739127,0.00013989946,0.00031740856,0.00023158718,0.00017563424,0.000065450055,0.0011285238,0.000031729705],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030217785,0.0011326765,0.025790645,0.00027146682,0.00011617563,0.000006382424,0.0004938736,0.0000040312207,0.00014567199,0.000028793991,0.9627976,0.008910546],"study_design_scores_gemma":[0.0030372406,0.0027082306,0.12708493,0.0003627913,0.00042865745,0.0003434248,0.00033350723,0.0012424281,0.000090068424,0.000056458186,0.86392564,0.00038663193],"about_ca_topic_score_codex":0.009227852,"about_ca_topic_score_gemma":0.002507347,"teacher_disagreement_score":0.28651187,"about_ca_system_score_codex":0.000509945,"about_ca_system_score_gemma":0.0002813145,"threshold_uncertainty_score":0.99989784},"labels":[],"label_agreement":null},{"id":"W2891872862","doi":"10.1503/cmaj.180267","title":"Emphysematous liver abscess in a 58-year-old woman","year":2018,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Liver abscess; Abscess; Medicine; Surgery; Computer science; General surgery; World Wide Web","score_opus":0.006898564984258562,"score_gpt":0.2507201557362993,"score_spread":0.24382159075204074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891872862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9551592,0.00010297039,0.000037332884,0.008089515,0.0007037772,0.00013864375,0.000007945898,0.000019415644,0.035741236],"genre_scores_gemma":[0.9882877,0.000078169774,0.0000916081,0.0066818814,0.0016173642,0.000006083875,0.000005359732,0.000013552874,0.0032182932],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99846125,0.000065145585,0.00027644084,0.000121844285,0.00067454507,0.00040078466],"domain_scores_gemma":[0.9983571,0.000047728052,0.00010176008,0.000090978516,0.00028853863,0.0011138736],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00057567057,0.00009224102,0.00019391475,0.00026259004,0.0001974903,0.000039522994,0.0000719989,0.00026004115,0.009625091],"category_scores_gemma":[0.0006206696,0.00007870503,0.00007258165,0.00028889673,0.000047636004,0.000083042745,0.000008724124,0.00054095575,0.0009231369],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021717904,0.0001407508,0.8780001,0.000009559367,0.00016160292,0.002684875,0.0006287318,2.7948755e-7,0.000003937847,0.0003426958,0.10072213,0.017283639],"study_design_scores_gemma":[0.0031623726,0.00022733546,0.80116534,0.00019652324,0.000050353636,0.0016712821,0.00034991844,0.00023085196,0.000020151823,0.00021718559,0.19256622,0.00014249659],"about_ca_topic_score_codex":0.0069291755,"about_ca_topic_score_gemma":0.07514988,"teacher_disagreement_score":0.09184408,"about_ca_system_score_codex":0.0014707053,"about_ca_system_score_gemma":0.0016076069,"threshold_uncertainty_score":0.99985474},"labels":[],"label_agreement":null},{"id":"W2898055168","doi":"10.22233/20412495.0708.9","title":"Clinical conundrum","year":2008,"lang":"en","type":"article","venue":"BSAVA Companion","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Political science","score_opus":0.08530536813558492,"score_gpt":0.3661487340929094,"score_spread":0.28084336595732445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898055168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95307267,0.000071660834,0.00046447935,0.00022494498,0.00041209522,0.0001517667,0.0000015216357,0.00009247056,0.045508385],"genre_scores_gemma":[0.9943679,0.00008289801,0.0009297842,0.0002873211,0.00023720736,0.0000053139584,0.000019763776,0.000009116799,0.0040607066],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994305,0.000026277976,0.00018682219,0.0001358982,0.00010152684,0.00011901204],"domain_scores_gemma":[0.9996025,0.000033049473,0.000035796795,0.00018483461,0.00004885779,0.00009497451],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007178957,0.000068476176,0.00018212765,0.000036003727,0.00011281152,0.0000027082194,0.000022508091,0.00005552527,0.0002975017],"category_scores_gemma":[0.00002699698,0.000053880205,0.00009783689,0.00007446811,0.00007358944,0.000029569943,0.000016542925,0.000106735286,0.0009912242],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044373424,0.0005682736,0.9788044,0.000005816885,0.0000660983,0.00013767181,0.000037807713,9.06494e-7,0.00005134388,0.0006625627,0.012598023,0.007022713],"study_design_scores_gemma":[0.0018016143,0.00028646347,0.9178375,0.000015708636,0.000045412788,0.00069369,0.000013661829,0.00016658656,0.00009696735,0.000054984437,0.07892682,0.00006060873],"about_ca_topic_score_codex":0.00004137489,"about_ca_topic_score_gemma":0.0000021812452,"teacher_disagreement_score":0.066328794,"about_ca_system_score_codex":0.000031259147,"about_ca_system_score_gemma":0.000052377018,"threshold_uncertainty_score":0.9997866},"labels":[],"label_agreement":null},{"id":"W2898428315","doi":"10.1038/s41385-018-0101-9","title":"Entamoeba histolytica-induced IL-1β secretion is dependent on caspase-4 and gasdermin D","year":2018,"lang":"en","type":"article","venue":"Mucosal Immunology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Inflammasome; Caspase 1; Entamoeba histolytica; Secretion; Cell biology; Caspase; Pyroptosis; Chemistry; Caspase 3; Biology; Biochemistry; Microbiology; Receptor; Apoptosis; Programmed cell death","score_opus":0.02029564953847898,"score_gpt":0.2856362548500634,"score_spread":0.26534060531158443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898428315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9848979,0.00015997613,0.00011249458,0.0012921233,0.0006060128,0.00027450378,0.000011670185,0.0000771084,0.012568218],"genre_scores_gemma":[0.99599993,0.000060262882,0.0001559912,0.0009344631,0.000169295,0.000029975437,0.00003233345,0.000022590088,0.0025951376],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999037,0.000051350897,0.00018818199,0.0003238735,0.000111987785,0.00028757175],"domain_scores_gemma":[0.99939173,0.000045528766,0.00006392424,0.00033077245,0.00008820621,0.000079822945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007904417,0.00017196978,0.00024596532,0.0001602227,0.00018251536,0.000011061332,0.00004335704,0.00018746917,0.00088793883],"category_scores_gemma":[0.00004984201,0.00014530026,0.00005422002,0.00009467582,0.00019452944,0.000047395228,0.00005248341,0.00019897877,0.0007654771],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004504112,0.0047687436,0.10061882,0.00013506335,0.0031399608,0.0020967962,0.005152912,3.0034207e-7,0.5937455,0.016248913,0.01235818,0.2572307],"study_design_scores_gemma":[0.019137971,0.022374412,0.51682884,0.00024941974,0.001169539,0.008100229,0.0010210309,0.000568099,0.36238196,0.0020614595,0.06505828,0.0010487785],"about_ca_topic_score_codex":0.00041413022,"about_ca_topic_score_gemma":0.00006658866,"teacher_disagreement_score":0.41621,"about_ca_system_score_codex":0.00022282153,"about_ca_system_score_gemma":0.0000644991,"threshold_uncertainty_score":0.9838914},"labels":[],"label_agreement":null},{"id":"W2902139485","doi":"10.1093/ofid/ofy210.1992","title":"2339. Perianal Infections in Children With Acute Myeloid Leukemia: A Report From the Canadian Infection in Acute Myeloid Leukemia Research Group","year":2018,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Children's Hospital; Institute for Clinical Evaluative Sciences; Children's Hospital of Eastern Ontario; University of Calgary; SickKids Foundation; Hamilton Health Sciences; BC Children's Hospital; Izaak Walton Killam Health Centre; Montreal Children's Hospital; McMaster Children's Hospital; Hospital for Sick Children","funders":"","keywords":"Medicine; Myeloid leukemia; Internal medicine; Leukemia; Surgery; Neutropenia; Myeloid; Gastroenterology; Chemotherapy","score_opus":0.016197072510733837,"score_gpt":0.3113086931820639,"score_spread":0.29511162067133007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902139485","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96491134,0.00009488191,0.00005874923,0.00079013617,0.0003449607,0.0030691086,0.00023412681,0.00012917185,0.030367538],"genre_scores_gemma":[0.9954514,0.0002497615,0.000057276557,0.0006162909,0.00039555418,0.0012630284,0.00096043333,0.00009323116,0.00091305276],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9962392,0.00033773793,0.0006282211,0.000992613,0.0006057745,0.001196454],"domain_scores_gemma":[0.99749255,0.0001675041,0.00020284818,0.001097764,0.00042454302,0.0006148092],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0006419708,0.00048233668,0.00062352914,0.0009826705,0.0020353503,0.00053732697,0.00033634933,0.00032639637,0.0006982938],"category_scores_gemma":[0.0002717192,0.00035536857,0.00018384214,0.0024883056,0.00068817363,0.0008404684,0.0003473321,0.0010962151,0.00029813903],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002959326,0.0005601612,0.9903058,0.0000052614014,0.0011339477,0.00078049325,0.00023316639,0.000036869442,0.000025799502,0.0004568071,0.0041196705,0.002046115],"study_design_scores_gemma":[0.004887869,0.001593907,0.98284066,0.00017458314,0.00061106705,0.0032813696,0.00014485705,0.00009782087,0.000054847696,0.0013452099,0.004578111,0.0003896919],"about_ca_topic_score_codex":0.8926165,"about_ca_topic_score_gemma":0.9564462,"teacher_disagreement_score":0.063829705,"about_ca_system_score_codex":0.0068823188,"about_ca_system_score_gemma":0.00508752,"threshold_uncertainty_score":0.99988985},"labels":[],"label_agreement":null},{"id":"W2903069634","doi":"10.1371/journal.ppat.1007466","title":"Defining cooperative roles for colonic microbiota and Muc2 mucin in mediating innate host defense against Entamoeba histolytica","year":2018,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Institute of Nutrition, Metabolism and Diabetes; Canadian Institutes of Health Research","keywords":"Mucin 2; Mucin; Mucus; Biology; Microbiology; Innate immune system; Gut flora; Goblet cell; Entamoeba histolytica; Immunology; Immune system; Gene expression; Epithelium; Biochemistry","score_opus":0.013357680624645972,"score_gpt":0.2603395538325369,"score_spread":0.2469818732078909,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903069634","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99642026,0.00040238994,0.000044827415,0.00035432397,0.00009833825,0.00068693113,0.00017093155,0.000046418867,0.0017755729],"genre_scores_gemma":[0.9961612,0.00006708135,0.0028731038,0.00040274023,0.000096956894,0.000110402405,0.000108152875,0.000034690154,0.00014566905],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989296,0.000045399825,0.00027238482,0.00033258137,0.00008916153,0.00033084909],"domain_scores_gemma":[0.9993142,0.0001454156,0.000087769586,0.00017332994,0.00017228103,0.000107004664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015705025,0.00018443832,0.00031910048,0.00016122797,0.00025709058,0.000017443339,0.000036041256,0.00010689409,0.000031129624],"category_scores_gemma":[0.00038471163,0.00016076276,0.00005456801,0.00019516579,0.00015211444,0.000053258394,0.000048959122,0.0001305551,0.000037995054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062163465,0.0016847758,0.35816833,0.00024324397,0.00064740004,0.00036058444,0.011819133,0.000005555634,0.6164321,0.0026968312,0.00041290274,0.006907518],"study_design_scores_gemma":[0.059189685,0.014810268,0.42300984,0.0032972486,0.0036658852,0.0009843992,0.01094677,0.02602988,0.4348287,0.00034864005,0.019475223,0.003413447],"about_ca_topic_score_codex":0.000029686804,"about_ca_topic_score_gemma":0.00032191043,"teacher_disagreement_score":0.18160339,"about_ca_system_score_codex":0.00019932333,"about_ca_system_score_gemma":0.00011168742,"threshold_uncertainty_score":0.6555715},"labels":[],"label_agreement":null},{"id":"W2910311291","doi":"10.3389/fcimb.2018.00447","title":"Entamoeba histolytica Cyclooxygenase-Like Protein Regulates Cysteine Protease Expression and Virulence","year":2019,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; University of Calgary","keywords":"Entamoeba histolytica; Virulence; Cysteine protease; Microbiology; Protease; Proteases; Entamoeba; Biology; Virology; Enzyme; Biochemistry; Gene","score_opus":0.003962138627135624,"score_gpt":0.1985243187088106,"score_spread":0.19456218008167497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2910311291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942674,0.0014860671,0.0016240884,0.0000941701,0.00060176343,0.001277095,0.000009676244,0.00004865141,0.0005910691],"genre_scores_gemma":[0.99416643,0.00018939096,0.0022224924,0.000085329535,0.000045564124,0.00008155766,0.00009085385,0.000019140298,0.0030992487],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989268,0.0000945049,0.000255953,0.00042785518,0.00004134175,0.0002535389],"domain_scores_gemma":[0.9995406,0.000012299876,0.00009187964,0.0002215577,0.00003984313,0.00009381048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014423786,0.00019995854,0.00034976602,0.00024507113,0.00010209367,0.000012373638,0.00002742122,0.00022313162,0.00010751035],"category_scores_gemma":[0.0000201447,0.0001657678,0.000055527304,0.00013463212,0.00016344842,0.000106159976,0.00005434194,0.00021201365,0.000030512507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018499757,0.00020650605,0.22395132,0.0001364019,0.000043006967,0.000023274606,0.0000752242,0.0000024555322,0.7734167,0.000036839603,0.0007233245,0.0011999675],"study_design_scores_gemma":[0.015098403,0.0036574567,0.04869549,0.0009936756,0.00024562373,0.001338331,0.00023525277,0.0010306132,0.84113175,0.0007776851,0.08589632,0.0008993682],"about_ca_topic_score_codex":0.00017044427,"about_ca_topic_score_gemma":0.0000051478587,"teacher_disagreement_score":0.17525582,"about_ca_system_score_codex":0.00012647822,"about_ca_system_score_gemma":0.000037295486,"threshold_uncertainty_score":0.6759814},"labels":[],"label_agreement":null},{"id":"W2911714167","doi":"10.48496/wn69-cw40","title":"Composition and Dynamics of the Plasma Membrane of Entamoeba Histolytica","year":2025,"lang":"en","type":"article","venue":"Digital Commons - RU (Rockefeller University)","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Entamoeba histolytica; Dynamics (music); Composition (language); Chemistry; Microbiology; Biology; Food science; Physics; Art","score_opus":0.006250053410747022,"score_gpt":0.19573120497473043,"score_spread":0.1894811515639834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911714167","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7577411,0.000018002986,0.0002420981,0.00032347607,0.000058844398,0.00016120887,0.00007364027,0.000015671829,0.24136594],"genre_scores_gemma":[0.99024004,0.000014169812,0.00004320691,0.000016127615,0.0000028216891,2.4605916e-7,0.000046164354,0.000004708231,0.009632529],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99957275,0.000015944412,0.00012046912,0.00011208526,0.00009166864,0.00008705392],"domain_scores_gemma":[0.9995281,0.00007049644,0.000069144524,0.00021596227,0.00007703287,0.000039270384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000015585993,0.00008904343,0.00019552211,0.00021357069,0.00010991351,0.000006855188,0.00007966733,0.00005489957,0.000017471422],"category_scores_gemma":[0.000010721222,0.00007384317,0.000097560296,0.0004029907,0.00022194297,0.00008925668,0.0001340199,0.000088773755,0.0000019720023],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012042557,0.0030646848,0.7594252,0.0005338098,0.0015292631,0.00009049383,0.00047453208,0.000058706668,0.0019843755,0.21708933,0.0014316889,0.013113662],"study_design_scores_gemma":[0.05567677,0.0040886006,0.5672867,0.004983963,0.009082838,0.0006510865,0.012704668,0.0199116,0.101678945,0.0060825255,0.21568686,0.0021654982],"about_ca_topic_score_codex":0.000055690238,"about_ca_topic_score_gemma":0.000058669404,"teacher_disagreement_score":0.23249891,"about_ca_system_score_codex":0.00013842438,"about_ca_system_score_gemma":0.000061657396,"threshold_uncertainty_score":0.3011237},"labels":[],"label_agreement":null},{"id":"W2912403115","doi":"10.22374/cjgim.v14i1.279","title":"Liver Abscess Metastatic Syndrome Caused by Hypermucoviscous <i>Klebsiella</i> Pneumoniae in a Canadian Patient of Vietnamese Origin","year":2019,"lang":"en","type":"article","venue":"Canadian Journal of General Internal Medicine","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Université Laval","funders":"","keywords":"Klebsiella pneumoniae; Medicine; Hepatic abscess; Liver abscess; Pyogenic liver abscess; Klebsiella infections; Abscess; Virulence; Klebsiella; Pathology; Gene; Biology; Surgery","score_opus":0.011804278926807164,"score_gpt":0.2571086890605177,"score_spread":0.24530441013371054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912403115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99073154,0.0023676208,0.000018686986,0.0014181834,0.0009975568,0.00033025118,0.000066447916,0.000002943004,0.0040667825],"genre_scores_gemma":[0.99582833,0.00010802011,0.000101102996,0.001057727,0.00010108639,0.0000048583615,0.000018546763,0.00003184565,0.002748487],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99800354,0.000074817304,0.00082859147,0.0001957842,0.00034960726,0.000547649],"domain_scores_gemma":[0.99744886,0.000047805595,0.00034832602,0.00023683211,0.00030856926,0.0016095887],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029527055,0.0002419365,0.0007895599,0.0010608373,0.000044582044,0.000012472834,0.0001781952,0.000083257255,0.0016682936],"category_scores_gemma":[0.00010909342,0.00017932258,0.00013803692,0.00036191882,0.0001506591,0.00011672932,0.000009337467,0.00042807384,0.000047034824],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026788996,0.00032640455,0.89708894,0.00033957078,0.001471671,0.0424287,0.004002462,0.00042837125,0.0118217915,0.00020328366,0.03298547,0.008635438],"study_design_scores_gemma":[0.05294746,0.045849502,0.47992322,0.018875653,0.0036827894,0.103543214,0.0061286064,0.0074579148,0.007484727,0.00059099594,0.2709024,0.0026135354],"about_ca_topic_score_codex":0.82766396,"about_ca_topic_score_gemma":0.69977134,"teacher_disagreement_score":0.41716573,"about_ca_system_score_codex":0.0011181087,"about_ca_system_score_gemma":0.0024925894,"threshold_uncertainty_score":0.99924433},"labels":[],"label_agreement":null},{"id":"W2912685337","doi":"10.1289/isee.2015.2015-2570","title":"Extreme Precipitation, Drinking Water And Acute Gastro Intestinal Illness In A Canadian Surface Drinking Water System: Putative Links And Future Impact Of Climate Change","year":2015,"lang":"en","type":"article","venue":"ISEE Conference Abstracts","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Pacific Institute for Climate Solutions; Simon Fraser University; Public Health Agency of Canada; Fraser Health; BC Centre for Disease Control","funders":"","keywords":"Precipitation; Environmental science; Distributed lag; Climate change; Percentile; Dry season; Poisson regression; Wet season; Climatology; Medicine; Geography; Environmental health; Biology; Population; Ecology; Mathematics; Meteorology; Statistics","score_opus":0.04016206212298371,"score_gpt":0.2929950114928935,"score_spread":0.25283294936990974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912685337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972384,0.000061656974,0.000019551018,0.00037465582,0.00012693138,0.0004885057,0.000021651793,0.0000246669,0.0016439938],"genre_scores_gemma":[0.99933606,0.000057616307,0.00029135312,0.000022384562,0.00009390376,0.00002975337,0.000120621284,0.000018551451,0.000029760518],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987093,0.00004607601,0.00030790604,0.0002668617,0.00015178519,0.00051803206],"domain_scores_gemma":[0.99903,0.00002873147,0.00008741441,0.00013719896,0.00033555742,0.00038110113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032554878,0.00021514052,0.0003386071,0.00019982098,0.0000966946,0.000057198195,0.000044579985,0.00015111882,0.000024417643],"category_scores_gemma":[0.000020035179,0.00013442118,0.0000362496,0.00007458551,0.000080624486,0.00029978727,0.00004210305,0.00026483918,0.000011644091],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032957687,0.00013635025,0.9371721,0.00026939035,0.0002884332,0.0008189342,0.049950812,0.00053213065,0.0031094316,0.00023923327,0.000008794379,0.0071447995],"study_design_scores_gemma":[0.0021028332,0.0005210566,0.9890482,0.0007887189,0.00016972642,0.00058122753,0.003746856,0.00063572096,0.0019923116,0.000115078205,0.00007261909,0.0002256591],"about_ca_topic_score_codex":0.046878166,"about_ca_topic_score_gemma":0.031629264,"teacher_disagreement_score":0.05187608,"about_ca_system_score_codex":0.00029127864,"about_ca_system_score_gemma":0.00020736428,"threshold_uncertainty_score":0.98604095},"labels":[],"label_agreement":null},{"id":"W2921163381","doi":"10.1016/j.carj.2018.12.001","title":"A Simplified Low-Cost Training Phantom for Placement of Abscess Drainage Catheter","year":2019,"lang":"en","type":"article","venue":"Canadian Association of Radiologists Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Medicine; Imaging phantom; Drainage; Catheter; Abscess; Training (meteorology); Radiology; Surgery; Medical physics","score_opus":0.022435506403772072,"score_gpt":0.28692761012836565,"score_spread":0.2644921037245936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921163381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878834,0.00004934692,0.0012100905,0.00065161014,0.00049084367,0.0007001153,0.0001653471,0.000007945061,0.0088412985],"genre_scores_gemma":[0.9969774,0.00001678006,0.00038465092,0.00018444781,0.00011602285,0.000015016671,0.000044273143,0.000011505588,0.0022499408],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990613,0.00004263641,0.0003430846,0.00010865619,0.0001493583,0.00029497038],"domain_scores_gemma":[0.99876523,0.00014698475,0.00049701857,0.00010664941,0.00027474525,0.00020935106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005990786,0.00009511735,0.00033898043,0.0002266423,0.00008724557,0.000011793948,0.0000618502,0.00012328569,0.0001987707],"category_scores_gemma":[0.00031138313,0.000081031736,0.00017069315,0.00009712868,0.000027857866,0.000056254023,0.000003925659,0.00013771282,0.000008725385],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056494237,0.00050554867,0.94808793,0.00030658295,0.002794889,0.000079895115,0.0062104333,0.00093553244,0.003060749,0.0026559304,0.015558835,0.01923875],"study_design_scores_gemma":[0.041947253,0.0045339917,0.86840916,0.0009311075,0.0012218885,0.0010209065,0.005200965,0.0025664442,0.0038176184,0.002246482,0.067197226,0.00090698403],"about_ca_topic_score_codex":0.0010690576,"about_ca_topic_score_gemma":0.0022777924,"teacher_disagreement_score":0.07967878,"about_ca_system_score_codex":0.0013294381,"about_ca_system_score_gemma":0.000700954,"threshold_uncertainty_score":0.3476434},"labels":[],"label_agreement":null},{"id":"W2922221567","doi":"10.1093/jcag/gwz006.060","title":"A61 YELLOW DEATH","year":2019,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Medicine; Ascites; Internal medicine; Gastroenterology; Jaundice; Liver function tests; Liver function; Pleural effusion; Spontaneous bacterial peritonitis; Surgery","score_opus":0.0064555511346913305,"score_gpt":0.22406535453387208,"score_spread":0.21760980339918076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2922221567","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9886029,0.0000049402165,0.0000100594725,0.00699687,0.0006884685,0.00009214167,0.000007762236,0.0000013732962,0.0035955033],"genre_scores_gemma":[0.9947067,0.0000055165865,0.00012633915,0.001085258,0.00007597928,4.7458644e-7,0.0000012422367,0.0000054853144,0.0039929934],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99931145,0.00007636873,0.00024166697,0.000043125077,0.00016220093,0.00016519803],"domain_scores_gemma":[0.99898434,0.000024715479,0.0005192838,0.00010499291,0.0002499222,0.00011676563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030234843,0.000051126568,0.00021837914,0.00014460018,0.000041385294,0.000004348105,0.00007091963,0.000069693546,0.00020747235],"category_scores_gemma":[0.00010743527,0.00003460423,0.00016869314,0.000057740563,0.000014340326,0.00003597713,0.000008454828,0.00017226342,0.000024056826],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007157914,0.000035261823,0.9958518,0.0000039047623,0.00024355421,0.000006633826,0.000034393313,0.000022783648,0.00009218375,0.000055803364,0.0035372053,0.000044905708],"study_design_scores_gemma":[0.001894626,0.00085771945,0.99078685,0.000029244287,0.00013302786,0.0002081985,0.000021592055,0.000018677101,0.000054574088,0.00008204342,0.005897555,0.00001590273],"about_ca_topic_score_codex":0.0027177322,"about_ca_topic_score_gemma":0.06663251,"teacher_disagreement_score":0.063914776,"about_ca_system_score_codex":0.0010518383,"about_ca_system_score_gemma":0.00031195342,"threshold_uncertainty_score":0.95039904},"labels":[],"label_agreement":null},{"id":"W2924509491","doi":"10.1016/j.jcrc.2019.03.004","title":"Response to Letter to the Editor (Mangioni et al)","year":2019,"lang":"en","type":"letter","venue":"Journal of Critical Care","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto; Queen's University","funders":"University of Toronto; Queen's University","keywords":"Hypertonic saline; Medicine; Tonicity; Glycocalyx; Saline; Isotonic Solutions; Internal medicine; Anesthesia; Endocrinology; Immunology","score_opus":0.01613672457018704,"score_gpt":0.3444655158868893,"score_spread":0.32832879131670223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2924509491","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0020770943,0.0002165871,0.0003343618,0.98673487,0.009229588,0.00030903312,0.00005856016,0.000009459294,0.0010304193],"genre_scores_gemma":[0.044786695,0.000001641624,0.00054657774,0.9143813,0.03817248,0.000012661961,0.0000134105,0.00004266433,0.0020425671],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99814296,0.00025413223,0.0003583763,0.00018051482,0.00076081295,0.00030319925],"domain_scores_gemma":[0.997624,0.0008315448,0.00006644354,0.00038979913,0.00091926503,0.00016894573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004024179,0.0002083325,0.00042999696,0.0002478413,0.000081351645,0.00005920093,0.00015913937,0.00029864354,0.00026215395],"category_scores_gemma":[0.0014746,0.00011771494,0.00037463277,0.00012619053,0.000048218404,0.000060244325,0.000061853665,0.0018557489,0.00068515365],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047571296,0.000039287603,0.00008811746,0.0000874352,0.00008035919,0.0021896146,0.00035799976,0.0000022519907,0.0000349767,0.0000074481068,0.9964986,0.0001381913],"study_design_scores_gemma":[0.0005172725,0.0016696999,0.00055941363,0.0002787151,0.00036924897,0.0007194499,0.00014901599,2.989644e-7,0.000037438258,0.000012008788,0.9955686,0.000118867516],"about_ca_topic_score_codex":0.000007803878,"about_ca_topic_score_gemma":0.0000016218096,"teacher_disagreement_score":0.072353594,"about_ca_system_score_codex":0.00030632527,"about_ca_system_score_gemma":0.00026684537,"threshold_uncertainty_score":0.88064927},"labels":[],"label_agreement":null},{"id":"W2933236207","doi":"10.1016/j.jvir.2018.09.023","title":"Use of the Transrectal Ultrasound Probe in Aspiration and Drainage in Pediatric Patients: A Retrospective Observational Study","year":2019,"lang":"en","type":"article","venue":"Journal of Vascular and Interventional Radiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Medicine; Surgery; Rectum; Retrospective cohort study; Demographics; Ultrasound; Drainage; Radiology","score_opus":0.028822306318417507,"score_gpt":0.2791809510265024,"score_spread":0.2503586447080849,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2933236207","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990484,0.00027437406,0.00007833109,0.00005150108,0.000107188585,0.0003901407,0.0000042348966,7.79181e-7,0.000045040517],"genre_scores_gemma":[0.99977833,0.00003105552,0.00009996018,0.00001945678,0.00003081583,0.000005285829,0.000004977901,0.0000037151012,0.00002642823],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991637,0.00014123313,0.00039225738,0.000092981725,0.00014667952,0.00006315757],"domain_scores_gemma":[0.999522,0.00008088458,0.00017909842,0.000054335545,0.00014373794,0.00001999103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034379374,0.00006299633,0.00023427609,0.00017545595,0.000018401774,0.000006100524,0.000024982914,0.000045669698,0.000034369936],"category_scores_gemma":[0.00020995876,0.000041030333,0.00013876149,0.00014715982,0.00003585259,0.00017156263,0.00001128422,0.00016238767,2.822125e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012609451,0.0011816858,0.9975484,0.00002908594,0.00013798616,0.0000046837977,0.00028465528,0.00002424066,0.000062681655,0.00047164696,0.000006326615,0.00012248513],"study_design_scores_gemma":[0.0038177317,0.0029502844,0.9921353,0.00006314225,0.000094811345,0.00009920719,0.000079363854,0.00003738873,0.0000068294335,0.0006748723,0.00001001886,0.00003109159],"about_ca_topic_score_codex":0.00005194646,"about_ca_topic_score_gemma":0.00008950672,"teacher_disagreement_score":0.0054131695,"about_ca_system_score_codex":0.000080012425,"about_ca_system_score_gemma":0.00004118603,"threshold_uncertainty_score":0.16731684},"labels":[],"label_agreement":null},{"id":"W2942662449","doi":"10.1017/cem.2019.188","title":"MP53: Management of cutaneous abscesses in the emergency department: a survey of Canadian practice patterns","year":2019,"lang":"en","type":"article","venue":"Canadian Journal of Emergency Medicine","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Emergency department; Primary care; Family medicine; Incision and drainage; Descriptive statistics; Closure (psychology); Abscess; Emergency medicine; Nursing; Surgery","score_opus":0.06919297931583296,"score_gpt":0.34541821304321657,"score_spread":0.2762252337273836,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2942662449","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95652586,0.002631069,0.0000156074,0.0021916344,0.0032038374,0.0005595419,0.00009020708,0.000001742649,0.03478048],"genre_scores_gemma":[0.99474394,0.004145378,0.000044602974,0.00010108455,0.00011218783,0.0000055253727,0.000040366212,0.000018142267,0.00078874215],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99782145,0.00016665115,0.0010856362,0.00014837296,0.00040741498,0.00037050268],"domain_scores_gemma":[0.997736,0.00009242991,0.00057119626,0.00036854096,0.00070333574,0.0005285398],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010139593,0.00017638874,0.00048535917,0.0011070479,0.00005939814,0.0000017262329,0.00023797594,0.000069645066,0.0074946275],"category_scores_gemma":[0.0003634122,0.00011719759,0.00010571115,0.0013253775,0.000052161835,0.00010318512,0.0000073683295,0.00024205982,0.000016898524],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009159287,0.00016020486,0.984112,0.00029672807,0.00061872695,0.0014439767,0.001499138,0.000026230715,0.000023600913,0.000320363,0.010338529,0.001068867],"study_design_scores_gemma":[0.001691462,0.001901033,0.9586392,0.0007831468,0.000666259,0.00054520625,0.004156066,0.000012367627,0.00003152101,0.000075973156,0.031354327,0.00014341793],"about_ca_topic_score_codex":0.7733301,"about_ca_topic_score_gemma":0.88508403,"teacher_disagreement_score":0.11175393,"about_ca_system_score_codex":0.0002010058,"about_ca_system_score_gemma":0.00093398825,"threshold_uncertainty_score":0.9934127},"labels":[],"label_agreement":null},{"id":"W2942943868","doi":"10.1017/cem.2019.203","title":"P012: Mortality rate of cancer patients by type presenting to the intensive care unit with sepsis.","year":2019,"lang":"en","type":"article","venue":"Canadian Journal of Emergency Medicine","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"","keywords":"Medicine; Sepsis; Intensive care unit; Intubation; Mortality rate; Logistic regression; Survival rate; Cancer; Retrospective cohort study; Internal medicine; Incidence (geometry); Odds ratio; Intensive care medicine; Surgery","score_opus":0.057235369649516504,"score_gpt":0.3594707417746595,"score_spread":0.30223537212514295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2942943868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99112236,0.0017042757,0.0000064861547,0.0018045565,0.0026880354,0.00035037438,0.000033951143,0.000002521986,0.0022874414],"genre_scores_gemma":[0.99772006,0.00013180153,0.0000067268393,0.00045671524,0.00021299176,0.0000034773263,0.000021807537,0.000015574393,0.0014308676],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990331,0.000041574705,0.00040542622,0.00010634629,0.00019940281,0.0002141638],"domain_scores_gemma":[0.9959022,0.000019942472,0.00027640696,0.0002021773,0.00317395,0.00042536392],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014824995,0.00012024428,0.00031568223,0.00014983605,0.00007464172,0.0000016245993,0.000097572476,0.000036770973,0.0023942823],"category_scores_gemma":[0.00031105382,0.0000641029,0.00005513783,0.00044575307,0.0000561491,0.000050152048,0.000008112236,0.00017961202,0.000012064375],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040501796,0.000015352924,0.9579031,0.000052558345,0.00036360184,0.000014624587,0.0023955787,0.000044726683,0.00008744702,0.000008061348,0.03885626,0.00021819616],"study_design_scores_gemma":[0.0017545759,0.0019592415,0.93986577,0.0006474081,0.0006679075,0.000005555039,0.006156984,0.000015002962,0.00021045204,0.000009211746,0.04860986,0.00009803305],"about_ca_topic_score_codex":0.041491933,"about_ca_topic_score_gemma":0.04506915,"teacher_disagreement_score":0.018037321,"about_ca_system_score_codex":0.00011340577,"about_ca_system_score_gemma":0.00059538905,"threshold_uncertainty_score":0.9985177},"labels":[],"label_agreement":null},{"id":"W2944949127","doi":"10.1080/19490976.2019.1614363","title":"The delicate balance between <i>Entamoeba histolytica</i>, mucus and microbiota","year":2019,"lang":"en","type":"article","venue":"Gut Microbes","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Institute of Nutrition, Metabolism and Diabetes; Canadian Institutes of Health Research; Consejo Nacional de Ciencia y Tecnología","keywords":"Mucus; Biology; Microbiology; Entamoeba histolytica; Pathogenesis; Virulence; Innate immune system; Gut flora; Mucin; Immunology; Dysbiosis; Immune system; Genetics; Gene","score_opus":0.004851023859288848,"score_gpt":0.22659948879126784,"score_spread":0.221748464931979,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944949127","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896048,0.0018887105,0.000033487428,0.0015961044,0.00017489048,0.00038817618,0.000023143737,0.000049570586,0.006241132],"genre_scores_gemma":[0.9862185,0.00029924113,0.00037443943,0.0003614247,0.000082186874,0.000009969529,0.00002814176,0.00001900327,0.012607059],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99926627,0.000018352051,0.00016802635,0.00023236383,0.00006338766,0.0002515879],"domain_scores_gemma":[0.99940294,0.00007844185,0.00005242816,0.00034324478,0.000047527443,0.00007539014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008552179,0.00013545874,0.00020176773,0.000035953915,0.00019077976,0.000031536583,0.000069733745,0.000062547726,0.00008163664],"category_scores_gemma":[0.000013373364,0.00008607962,0.00006308593,0.00008875406,0.00011986012,0.000039531955,0.000063742744,0.00012543213,0.00068219367],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050197454,0.000110094195,0.79040164,0.000056532677,0.00026699906,0.000014404032,0.00013702424,2.5190397e-7,0.18175727,0.00030896367,0.01569024,0.011206379],"study_design_scores_gemma":[0.0024772238,0.00024312692,0.39661655,0.00010671209,0.00026715823,0.00031513852,0.00008568904,0.000019042485,0.01290318,0.000121254554,0.5866164,0.00022852753],"about_ca_topic_score_codex":0.00011229758,"about_ca_topic_score_gemma":0.000012526049,"teacher_disagreement_score":0.5709262,"about_ca_system_score_codex":0.00007334324,"about_ca_system_score_gemma":0.000036177138,"threshold_uncertainty_score":0.8768447},"labels":[],"label_agreement":null},{"id":"W2952791527","doi":"10.1016/b978-0-12-809633-8.90748-9","title":"Entamoeba Histolytica: Biology and Host Immunity","year":2019,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Entamoeba histolytica; Virulence; Biology; Host (biology); Immune system; Pathogen; Microbiology; Immunology; Disease; Amoebiasis; Gastrointestinal tract; Parasite hosting; Innate immune system; Immunity; Virology; Medicine; Gene; Pathology","score_opus":0.014806474022864984,"score_gpt":0.26642536294786423,"score_spread":0.25161888892499923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952791527","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016478895,0.0019505237,0.0000022688448,0.000074579075,0.0004251339,0.0006776332,0.000046771645,0.000054262688,0.99512094],"genre_scores_gemma":[0.026778061,0.00031079617,0.00013125066,0.00033980532,0.00017013545,0.000015835582,0.000085930835,0.000063385545,0.9721048],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99903846,0.000017594695,0.00027306424,0.00034899486,0.000101321115,0.0002205598],"domain_scores_gemma":[0.99902666,0.000058200818,0.00013924211,0.0005674071,0.00008163402,0.00012687339],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00008745451,0.00034089008,0.0006365332,0.00016210851,0.0001109042,0.000010411797,0.00006058964,0.00040520422,0.000802484],"category_scores_gemma":[0.000014234612,0.00027512806,0.00017446581,0.000007031236,0.0002562037,0.00001563564,0.000112892674,0.00048987987,0.0006368363],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059475424,0.000047248104,0.0022916286,0.00014956875,0.0007027294,0.00008448225,0.00010246036,3.964628e-9,0.000094133204,0.026123114,0.00017983788,0.9701653],"study_design_scores_gemma":[0.0010575575,0.00043050206,0.0015522664,0.00028623833,0.0006371151,0.00026458356,0.000005937062,0.0000010170918,0.000029413774,0.0021102089,0.99337906,0.00024609326],"about_ca_topic_score_codex":0.0000062867553,"about_ca_topic_score_gemma":0.000011261517,"teacher_disagreement_score":0.9931992,"about_ca_system_score_codex":0.00018625923,"about_ca_system_score_gemma":0.00017520587,"threshold_uncertainty_score":0.9999701},"labels":[],"label_agreement":null},{"id":"W2965078951","doi":"10.1067/j.cpradiol.2019.08.002","title":"Parasitic Liver Infections: Imaging Findings and Strategies for Timely Diagnosis","year":2019,"lang":"en","type":"review","venue":"Current Problems in Diagnostic Radiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton General Hospital; University of Toronto; McMaster University; Toronto General Hospital; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Medicine; Pathognomonic; Differential diagnosis; Intensive care medicine; Radiology; Liver disease; Modalities; Disease; Pathology; Internal medicine","score_opus":0.07041608800752555,"score_gpt":0.37608613536792723,"score_spread":0.3056700473604017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965078951","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00046403642,0.99228984,0.000760106,0.000030093468,0.0012696106,0.004759449,0.000095285446,0.00006372737,0.00026782491],"genre_scores_gemma":[0.0021830406,0.9898326,0.000112510956,0.000024409972,0.00021504388,0.0070727593,0.0004362502,0.00006661123,0.00005678428],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99765474,0.00015426423,0.00082407973,0.00073192536,0.000092818154,0.0005421636],"domain_scores_gemma":[0.9929763,0.0062157996,0.00026168715,0.00034463085,0.000085190884,0.00011639201],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030437778,0.0005416299,0.001935297,0.00062399264,0.00011798999,0.000060029037,0.00010501414,0.00031042128,0.00008073496],"category_scores_gemma":[0.001682103,0.00043429265,0.00034620176,0.00029797293,0.00022232572,0.00017303812,0.00005403288,0.0005704319,0.0001218376],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004723968,0.00075789203,0.06701566,0.03512241,0.00034122102,0.000051843333,0.000115603005,0.000021858028,5.616255e-8,0.0014494986,0.002385504,0.89273375],"study_design_scores_gemma":[0.0018353215,0.0006951412,0.0026074986,0.032466143,0.003560847,0.0015357253,0.000022294562,0.00009651068,1.9883133e-7,0.001197189,0.95544475,0.00053837855],"about_ca_topic_score_codex":0.000053139236,"about_ca_topic_score_gemma":0.000015276322,"teacher_disagreement_score":0.95305926,"about_ca_system_score_codex":0.000333551,"about_ca_system_score_gemma":0.00046840668,"threshold_uncertainty_score":0.9998109},"labels":[],"label_agreement":null},{"id":"W2967349859","doi":"10.1128/iai.00540-19","title":"Functional Characterization of an Interferon Gamma Receptor-Like Protein on Entamoeba histolytica","year":2019,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Consejo Nacional de Ciencia y Tecnología; Government of Canada; Universidad Autónoma de Aguascalientes","keywords":"Entamoeba histolytica; Biology; Interferon gamma; Microbiology; Protozoa; Receptor; Virology; Immunology; Cytokine; Biochemistry","score_opus":0.014086232768532849,"score_gpt":0.24201246170124208,"score_spread":0.22792622893270922,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2967349859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99559784,0.000004315832,0.00019950271,0.00008362656,0.00043377702,0.00043413934,0.0000069891094,0.00005056498,0.0031892604],"genre_scores_gemma":[0.99573034,0.000014212986,0.000030551073,0.00008474992,0.000046578283,0.00002482034,0.00025276688,0.000011284973,0.0038046776],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994285,0.00006876528,0.0001741319,0.00013596032,0.00010492388,0.000087733235],"domain_scores_gemma":[0.99953425,0.000012895284,0.00009210387,0.00020839715,0.00009621021,0.000056131936],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000108566805,0.000102498205,0.00016014121,0.00013775729,0.00009129805,0.00000986159,0.000015118044,0.00007895161,0.001280237],"category_scores_gemma":[0.00001768745,0.00008838323,0.00004706146,0.0001114734,0.000037567486,0.00016572347,0.000016918842,0.00016686738,0.00014632232],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016132147,0.0022511345,0.13109592,0.0001467307,0.00016551293,0.0000014313024,0.00026592007,0.000003202877,0.8258395,0.0009717358,0.00007952336,0.03756617],"study_design_scores_gemma":[0.0019704816,0.0037567199,0.93391067,0.0001395866,0.000044397286,0.000054007363,0.0000328068,0.00014129136,0.053492095,0.000028868488,0.0063188476,0.00011021567],"about_ca_topic_score_codex":0.00037741705,"about_ca_topic_score_gemma":0.000010397068,"teacher_disagreement_score":0.8028148,"about_ca_system_score_codex":0.00014287412,"about_ca_system_score_gemma":0.00003380812,"threshold_uncertainty_score":0.9996327},"labels":[],"label_agreement":null},{"id":"W2969663713","doi":"10.1016/j.prp.2019.152608","title":"Multiple colonic and ileal perforations due to unsuspected intestinal amoebiasis—Case report and review","year":2019,"lang":"en","type":"review","venue":"Pathology - Research and Practice","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Amoebiasis; Medicine; Entamoeba histolytica; Gastroenterology; Internal medicine; Abdominal pain; Diarrhea; Disease; Differential diagnosis; Immunology; Pathology","score_opus":0.26310677441182423,"score_gpt":0.52751554351004,"score_spread":0.2644087690982158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969663713","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014448911,0.98983574,0.00003087178,0.0019523848,0.00010409405,0.0031413613,0.00005686704,0.00003218261,0.0034016073],"genre_scores_gemma":[0.0005976803,0.9937218,0.0025860048,0.00019290125,0.00012345475,0.00051737827,0.00018739315,0.00003701028,0.0020363736],"study_design_codex":"design_other","study_design_gemma":"case_report","domain_scores_codex":[0.99665904,0.0013607125,0.0005291263,0.00075939763,0.00025438788,0.0004373272],"domain_scores_gemma":[0.9923508,0.005771386,0.00025597558,0.0005519505,0.0006797643,0.0003900936],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0032671639,0.000293385,0.0012679034,0.00036801494,0.00046779434,0.00006383683,0.000054381788,0.00027041108,0.00010505448],"category_scores_gemma":[0.02313524,0.00020215969,0.0000746665,0.0005719208,0.00035114223,0.00016838669,0.00026848674,0.0012986116,0.0001268501],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024200967,0.0005614973,0.0009786887,0.031625465,0.00043334402,0.39325574,0.00016178438,1.4514759e-8,0.000002251962,0.00020723471,0.0029904211,0.5695416],"study_design_scores_gemma":[0.0003283568,0.0010566204,0.00019656503,0.005370578,0.0010652181,0.53039783,0.00007501689,0.0000035370676,1.4884223e-7,0.000014300252,0.46138462,0.0001072067],"about_ca_topic_score_codex":0.00024427698,"about_ca_topic_score_gemma":0.00013685398,"teacher_disagreement_score":0.56943434,"about_ca_system_score_codex":0.00012596889,"about_ca_system_score_gemma":0.00070531666,"threshold_uncertainty_score":0.9850933},"labels":[],"label_agreement":null},{"id":"W2972405672","doi":"10.1503/cmaj.1095779","title":"Unprecedented public health effort tackles soaring TB rates in Nunavut","year":2019,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tuberculosis; Public health; Medicine; Environmental health; Geography; Economic growth; Political science; Environmental protection; Pathology","score_opus":0.012360726262199433,"score_gpt":0.27966000521960094,"score_spread":0.2672992789574015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972405672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9362437,0.00016024243,0.000029189856,0.05274777,0.0006945207,0.00022661101,0.0000053874323,0.00001917579,0.009873408],"genre_scores_gemma":[0.9892257,0.0001494408,0.00006841419,0.008242729,0.00038063145,0.000006873282,0.00002940431,0.000015009108,0.0018818006],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980266,0.00009731432,0.00041680047,0.00014323455,0.0007291388,0.0005868839],"domain_scores_gemma":[0.9978537,0.000071573995,0.0001799351,0.00009355059,0.00020008965,0.0016011378],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001475222,0.000107092725,0.00028638236,0.00037846633,0.00017695951,0.00006595758,0.00007649805,0.00022350224,0.0047237356],"category_scores_gemma":[0.000604486,0.00009202508,0.00008513696,0.00035243804,0.000016708791,0.00013995357,0.00000991263,0.0007550944,0.00046426087],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003656168,0.00006498309,0.9773511,0.000010141786,0.00010122225,0.00013006048,0.00021931774,0.0000017563552,0.0000018956088,0.00014704671,0.0075283586,0.014440443],"study_design_scores_gemma":[0.002693241,0.00014559217,0.86916333,0.00018803724,0.000011968886,0.0004901189,0.0004610979,0.00041279703,0.000005987561,0.00007330497,0.12625454,0.000099988254],"about_ca_topic_score_codex":0.008613051,"about_ca_topic_score_gemma":0.08562488,"teacher_disagreement_score":0.11872619,"about_ca_system_score_codex":0.0036165891,"about_ca_system_score_gemma":0.005525712,"threshold_uncertainty_score":0.9979887},"labels":[],"label_agreement":null},{"id":"W2972872735","doi":"10.1016/b978-2-294-76430-1.00002-0","title":"Perturbateurs de l’axe cerveau – intestin – pelvis","year":2019,"lang":"fr","type":"book-chapter","venue":"Elsevier eBooks","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Collège d'Études Ostéopathiques de Montréal","funders":"","keywords":"Medicine","score_opus":0.020452312015251214,"score_gpt":0.263813636538108,"score_spread":0.2433613245228568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972872735","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0025536022,0.004995115,0.000035159766,0.00037858507,0.003169526,0.0015189787,0.00010926747,0.0001467109,0.98709303],"genre_scores_gemma":[0.065672226,0.0005564256,0.00087390194,0.00083489646,0.0014907651,0.000067847795,0.000116590454,0.0002582415,0.9301291],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967234,0.00010449277,0.0007720753,0.00088682934,0.00045984733,0.0010533481],"domain_scores_gemma":[0.9972965,0.0003539884,0.00038504082,0.0011304407,0.00027772225,0.0005562754],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003992836,0.0009967845,0.0012024199,0.00031992357,0.00028689415,0.00006257883,0.00026204507,0.0008186643,0.005998344],"category_scores_gemma":[0.00017953923,0.00088295236,0.0007639077,0.000037138325,0.0005044617,0.00006642177,0.00020664925,0.0012338184,0.012081389],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007123919,0.00014892963,0.008394334,0.00049509935,0.00095592084,0.0007836972,0.0003544087,0.0000028705922,0.00006887056,0.025789792,0.00026675392,0.96266806],"study_design_scores_gemma":[0.0019151366,0.0010208436,0.002949326,0.0038162195,0.0019039689,0.0012007541,0.000061406354,0.000121112935,0.00012131032,0.0024620423,0.98364407,0.0007837985],"about_ca_topic_score_codex":0.00004271047,"about_ca_topic_score_gemma":0.000052080475,"teacher_disagreement_score":0.98337734,"about_ca_system_score_codex":0.0011168781,"about_ca_system_score_gemma":0.00088201504,"threshold_uncertainty_score":0.9993621},"labels":[],"label_agreement":null},{"id":"W2974282048","doi":"10.1128/iai.00279-19","title":"Entamoeba histolytica Interaction with Enteropathogenic Escherichia coli Increases Parasite Virulence and Inflammation in Amebiasis","year":2019,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Fundación Miguel Alemán, A.C.; Natural Sciences and Engineering Research Council of Canada; Consejo Nacional de Ciencia y Tecnología; Government of Canada; University of Calgary","keywords":"Entamoeba histolytica; Virulence; Biology; Microbiology; Proinflammatory cytokine; Enteropathogenic Escherichia coli; Inflammation; Immunology; Gene","score_opus":0.00860648568093205,"score_gpt":0.25216103395352857,"score_spread":0.2435545482725965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2974282048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970856,0.00006697219,0.00011191614,0.000045545083,0.00009135743,0.0003622745,0.0000021146986,0.0000433461,0.0021909182],"genre_scores_gemma":[0.9992102,0.00036887865,0.000083587314,0.00007031322,0.00001956013,0.00003060605,0.000023341661,0.000009656691,0.00018386733],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993954,0.00008960667,0.00016840627,0.00015792726,0.00007756827,0.00011109391],"domain_scores_gemma":[0.9995994,0.000051248957,0.000083633604,0.00015220711,0.000053100237,0.00006044235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121218654,0.00012106387,0.00017747968,0.00017000537,0.000100634184,0.000028770146,0.000012906665,0.000060460337,0.0001412125],"category_scores_gemma":[0.00003908191,0.000100695426,0.000026046084,0.00017810041,0.000059120284,0.0003025554,0.000025605419,0.00020390273,0.00003623575],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032910015,0.00022702232,0.9790351,0.00005163531,0.000046440364,0.000005657278,0.00022103704,0.000005912078,0.011710765,0.000047083457,0.0000042318998,0.008316061],"study_design_scores_gemma":[0.0019036894,0.0006780055,0.99283516,0.00016770173,0.00007514812,0.00019922784,0.00014906438,0.0005147676,0.002514817,0.000020068343,0.00084318063,0.00009917253],"about_ca_topic_score_codex":0.004423035,"about_ca_topic_score_gemma":0.00058687635,"teacher_disagreement_score":0.013800103,"about_ca_system_score_codex":0.00014808653,"about_ca_system_score_gemma":0.000029332783,"threshold_uncertainty_score":0.6686335},"labels":[],"label_agreement":null},{"id":"W2981830070","doi":"10.1093/ofid/ofz360.1368","title":"1504. Epidemiology and Etiology of Pyogenic Liver Abscess in the Calgary Health Zone: A Population-Based Study","year":2019,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Medicine; Internal medicine; Population; Pyogenic liver abscess; Epidemiology; Mortality rate; Surgery; Gastroenterology; Liver abscess; Abscess","score_opus":0.022663688330502987,"score_gpt":0.3480620333167747,"score_spread":0.32539834498627174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981830070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947093,0.00062899594,0.000061020855,0.00063052506,0.00009941466,0.0024867363,0.000018727065,0.000020666002,0.0013445866],"genre_scores_gemma":[0.9975415,0.000041931173,0.000034768775,0.001960254,0.00001354362,0.00020370958,0.00009629242,0.000013276634,0.000094722694],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99851507,0.0004862262,0.00037115364,0.00028340524,0.00008330597,0.00026083036],"domain_scores_gemma":[0.99884075,0.0004952165,0.00018827897,0.00034508362,0.000043445503,0.00008722966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043233222,0.00013897655,0.00052710244,0.00013752466,0.00013583674,0.000010865834,0.000099733435,0.000060147013,0.0001900381],"category_scores_gemma":[0.00014088248,0.00009197486,0.00007681744,0.0002054384,0.00005390737,0.00007603121,0.000077332006,0.0001188599,0.000026448428],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019070615,0.0017721581,0.9935278,0.000055681336,0.00009319851,0.000017047681,0.000118629556,0.000068196714,6.8755355e-7,0.00078161666,0.00014764594,0.0032266018],"study_design_scores_gemma":[0.0036025424,0.002295596,0.99267787,0.000050540213,0.00010143129,0.00005085759,0.00031245762,0.00028419954,7.135962e-7,0.00045413614,0.000092434886,0.00007721409],"about_ca_topic_score_codex":0.019464262,"about_ca_topic_score_gemma":0.0038668497,"teacher_disagreement_score":0.015597411,"about_ca_system_score_codex":0.00009869299,"about_ca_system_score_gemma":0.00017822807,"threshold_uncertainty_score":0.9870652},"labels":[],"label_agreement":null},{"id":"W2983917797","doi":"10.1503/cjs.011718","title":"Indigenous health disparities: a challenge and an opportunity","year":2018,"lang":"en","type":"article","venue":"Canadian Journal of Surgery","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"University of Alberta","keywords":"Medicine; Indigenous; Health equity; Environmental health; Nursing; Public health","score_opus":0.09362617395412841,"score_gpt":0.3186925697844661,"score_spread":0.22506639583033766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2983917797","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99448836,0.0015203322,0.00002044702,0.0018669545,0.00037408454,0.00006508761,0.000014884804,0.000004343039,0.0016454872],"genre_scores_gemma":[0.99795854,0.00042129224,0.000062506915,0.0009670715,0.0004161489,8.913291e-7,0.0000055459077,0.000009929429,0.00015809998],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993572,0.000036671612,0.00022638676,0.00006469895,0.000074844975,0.00024019805],"domain_scores_gemma":[0.9979142,0.00003759936,0.00012599333,0.00010124868,0.00015324542,0.0016677269],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037252848,0.000068184505,0.00025196632,0.00031582944,0.00023787643,0.000017659453,0.00002168937,0.000041806143,0.0002156915],"category_scores_gemma":[0.000081617,0.000056582467,0.00005182785,0.00007955366,0.00012748521,0.00011758756,0.0000024638343,0.000121201614,0.000003533333],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036492853,0.00013165949,0.8919808,0.00006031312,0.00016158182,0.0014779258,0.0028851521,7.071456e-8,0.0000015378371,0.00016112906,0.007658131,0.09544519],"study_design_scores_gemma":[0.0007004492,0.0019585781,0.9195723,0.00036296682,0.00007769099,0.005126418,0.001025693,0.000005758107,0.000014718072,0.00063153444,0.07036215,0.0001617644],"about_ca_topic_score_codex":0.019340234,"about_ca_topic_score_gemma":0.031834297,"teacher_disagreement_score":0.09528343,"about_ca_system_score_codex":0.00017149185,"about_ca_system_score_gemma":0.0046641626,"threshold_uncertainty_score":0.98719007},"labels":[],"label_agreement":null},{"id":"W2989586821","doi":"10.1038/s41385-019-0233-6","title":"Entamoeba histolytica stimulates the alarmin molecule HMGB1 from macrophages to amplify innate host defenses","year":2019,"lang":"en","type":"article","venue":"Mucosal Immunology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"HMGB1; Inflammasome; Innate immune system; Secretion; Biology; Entamoeba histolytica; Cell biology; Microbiology; Immune system; Tumor necrosis factor alpha; NLRC4; Caspase 1; Chemokine; Immunology; Inflammation","score_opus":0.00820374182995511,"score_gpt":0.2572378626523985,"score_spread":0.2490341208224434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2989586821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916211,0.0011234196,0.00013696642,0.001820525,0.0006615949,0.00059722783,0.00005913042,0.00010044263,0.003879645],"genre_scores_gemma":[0.99458843,0.00006521138,0.0004386427,0.0013682174,0.00006651668,0.000052013478,0.00009649706,0.00003677842,0.0032877005],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988284,0.000082726336,0.00023917202,0.0003460265,0.00012405547,0.0003795917],"domain_scores_gemma":[0.9989592,0.00021758479,0.00006727389,0.00059882225,0.00008303379,0.00007410514],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007103473,0.00021874938,0.0003443457,0.000118789394,0.00014303159,0.000022376835,0.00015408524,0.00016025525,0.0016901694],"category_scores_gemma":[0.00008797128,0.00014767752,0.00010054472,0.00018815875,0.00013846229,0.00004464015,0.000155074,0.000289838,0.004139103],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018319115,0.0017247872,0.32390392,0.00004531742,0.003490067,0.0007861164,0.0029708976,0.000048775746,0.643134,0.0028331873,0.006746785,0.012484215],"study_design_scores_gemma":[0.0057193874,0.0023019079,0.8303665,0.00009055599,0.0005842943,0.0003770824,0.0007406285,0.00018625813,0.08042537,0.00044943378,0.07824833,0.0005102421],"about_ca_topic_score_codex":0.0014158906,"about_ca_topic_score_gemma":0.00003594544,"teacher_disagreement_score":0.5627087,"about_ca_system_score_codex":0.00014935283,"about_ca_system_score_gemma":0.000066072185,"threshold_uncertainty_score":0.9992224},"labels":[],"label_agreement":null},{"id":"W2991346852","doi":"10.24908/pocus.v4i2.13689","title":"Shedding light on a hidden source of septic shock with POCUS","year":2019,"lang":"en","type":"article","venue":"POCUS Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Septic shock; Medicine; Emergency department; Ultrasound; Computed tomography; Point of care ultrasound; Radiology; Shock (circulatory); Physical examination; Abscess; Emergency medicine; Intensive care medicine; Sepsis; Surgery; Nursing","score_opus":0.006023344865184195,"score_gpt":0.24561797043481784,"score_spread":0.23959462556963365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2991346852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9440054,0.000113112175,0.00026338614,0.00045966738,0.00015507851,0.00015858567,8.823968e-7,0.000018022787,0.054825846],"genre_scores_gemma":[0.991084,0.000015487165,0.00065325235,0.000098619465,0.00016879586,0.0000024694357,0.0000010661923,0.000023238244,0.007953114],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991801,0.000023726201,0.00019483753,0.000120294484,0.00027571787,0.00020533489],"domain_scores_gemma":[0.9994184,0.000036021454,0.00013657393,0.00017999904,0.000095419695,0.00013359387],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000114466864,0.00012452807,0.00025617855,0.00016190116,0.000086598615,0.00001904277,0.00004729826,0.00005023251,0.0010684845],"category_scores_gemma":[0.000021896472,0.000073371164,0.00010402159,0.00013405448,0.000019828278,0.000067085544,0.000013581621,0.000275185,0.00031265497],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013433939,0.0014232702,0.9396938,0.00012985739,0.0016134523,0.00071500137,0.0017757115,0.00022233644,0.007745471,0.0007810896,0.0026890188,0.041867565],"study_design_scores_gemma":[0.06851908,0.046246696,0.61773735,0.009205807,0.0045910906,0.071925096,0.0049259667,0.0019445082,0.06964023,0.0026818549,0.100378245,0.0022041025],"about_ca_topic_score_codex":0.000018527491,"about_ca_topic_score_gemma":0.0000022354989,"teacher_disagreement_score":0.3219565,"about_ca_system_score_codex":0.00011170016,"about_ca_system_score_gemma":0.000089467794,"threshold_uncertainty_score":0.9998447},"labels":[],"label_agreement":null},{"id":"W2994404350","doi":"10.1371/journal.pntd.0007923","title":"Whole genome sequencing of Entamoeba nuttalli reveals mammalian host-related molecular signatures and a novel octapeptide-repeat surface protein","year":2019,"lang":"en","type":"article","venue":"PLoS neglected tropical diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Japan Society for the Promotion of Science","keywords":"Entamoeba histolytica; Biology; Genome; Pseudogene; Genetics; Contig; Axenic; Gene; Bacteria","score_opus":0.008186313799634267,"score_gpt":0.2224173086765115,"score_spread":0.21423099487687722,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2994404350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962273,0.0011421425,0.0001375778,0.0002110996,0.000032127828,0.0015662449,0.0001810743,0.00013013954,0.00037228264],"genre_scores_gemma":[0.99766845,0.000016998913,0.00076851726,0.00012789146,0.000026480428,0.000049433722,0.00018804129,0.000048095495,0.0011060877],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983244,0.00007704747,0.00039930287,0.0004733339,0.00035946778,0.00036642738],"domain_scores_gemma":[0.99890983,0.00006665714,0.00014108152,0.00038744535,0.0001815897,0.0003133744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000005087981,0.00028771954,0.00053330424,0.000117378135,0.000078840014,0.000025495252,0.000081542086,0.00016837138,0.0003665666],"category_scores_gemma":[0.00017797136,0.00023642769,0.00017599111,0.00035532354,0.00012939717,0.00010515107,0.00006744427,0.00024569436,0.000057867564],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022238372,0.00082390895,0.057077687,0.00030172392,0.00048431536,0.00012112897,0.000057109497,0.000050908853,0.94030565,0.00050717784,0.000011831432,0.00003617214],"study_design_scores_gemma":[0.0038995366,0.0010619244,0.9614368,0.0005867124,0.00074671744,0.000037984188,0.0000657267,0.00039457652,0.031160744,0.00025844498,0.00006280549,0.00028799375],"about_ca_topic_score_codex":0.00007448938,"about_ca_topic_score_gemma":0.0000034284933,"teacher_disagreement_score":0.90914494,"about_ca_system_score_codex":0.00016141518,"about_ca_system_score_gemma":0.00014238272,"threshold_uncertainty_score":0.96412414},"labels":[],"label_agreement":null},{"id":"W2996413868","doi":"10.1148/radiol.2019171373","title":"Case 273: Pancreatic Duct–to–Portal Vein Fistula with Secondary Portal Vein Pyophlebitis—A Rare Complication of Chronic Pancreatitis","year":2019,"lang":"en","type":"article","venue":"Radiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital","funders":"","keywords":"Medicine; Pancreatitis; Complication; Abdomen; Acute pancreatitis; Gastroenterology; Abdominal pain; Pancreatic duct; Internal medicine; Physical examination; Surgery","score_opus":0.0075100709160728606,"score_gpt":0.24281306111694465,"score_spread":0.23530299020087178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2996413868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9808215,0.0003922336,0.0002464544,0.00015653574,0.00019775156,0.00090016105,0.00011810571,0.000058721984,0.017108526],"genre_scores_gemma":[0.9965014,0.0000407251,0.00067925244,0.0001437522,0.0001741462,0.00010717351,0.00056242663,0.000035694044,0.0017554228],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987227,0.00006699403,0.0003689589,0.00040184945,0.00012150822,0.0003180384],"domain_scores_gemma":[0.99892163,0.00008562723,0.00018061613,0.00053587515,0.00012378056,0.00015248453],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009152368,0.00021827564,0.00064439356,0.00015926197,0.00008110925,0.0000064319006,0.00006097677,0.00013735135,0.002116269],"category_scores_gemma":[0.000032139927,0.00017749729,0.00009331386,0.0002213263,0.00014010746,0.000077483564,0.000027973658,0.00019410683,0.00021334748],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069224666,0.0011936183,0.9338229,0.0007111513,0.0019572128,0.027786866,0.000762971,0.00015514158,0.0078649875,0.0054221614,0.0069945916,0.012636204],"study_design_scores_gemma":[0.009301903,0.010699252,0.6682392,0.00033819283,0.0008655397,0.30027303,0.000376717,0.00044697884,0.0021155265,0.00013076763,0.006653916,0.00055902347],"about_ca_topic_score_codex":0.000607589,"about_ca_topic_score_gemma":0.0002295459,"teacher_disagreement_score":0.27248618,"about_ca_system_score_codex":0.0001543564,"about_ca_system_score_gemma":0.0003018156,"threshold_uncertainty_score":0.9987959},"labels":[],"label_agreement":null},{"id":"W3008256423","doi":"10.1093/jcag/gwz047.113","title":"A114 AMEBIC COLITIS AS A RARE CAUSE OF PSEUDOMEMBRANOUS COLITIS","year":2020,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University Health Centre","funders":"","keywords":"Medicine; Pseudomembranous colitis; Colitis; Gastroenterology; Internal medicine; Leukocytosis; Ischemic colitis; Inflammatory bowel disease; Colonoscopy; Abdominal pain; Pancolitis; Disease; Clostridium difficile; Colorectal cancer; Antibiotics","score_opus":0.010462479012412536,"score_gpt":0.2338553448793037,"score_spread":0.22339286586689117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3008256423","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97326684,0.0000116287865,0.000011916929,0.02518525,0.0003123964,0.0001737162,0.00010555495,0.0000030621127,0.00092963205],"genre_scores_gemma":[0.9959535,0.000025921745,0.000086380736,0.0033248768,0.00013221885,0.000002235332,0.0000045534766,0.000011136494,0.000459203],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987011,0.00019053913,0.00050685246,0.000077868914,0.00026969644,0.00025396145],"domain_scores_gemma":[0.99793655,0.00005555685,0.0010323842,0.000115785966,0.0005259785,0.0003337473],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023894143,0.00009162608,0.0004609629,0.00016577239,0.00007200112,0.0000063427283,0.0001197509,0.0001069526,0.00022767039],"category_scores_gemma":[0.0005892766,0.00007239697,0.0002509206,0.00015723394,0.00006383989,0.00005166924,0.000018250781,0.0002393996,0.000008089657],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006292184,0.00008483164,0.98917985,0.000032782744,0.00083097816,0.00012210048,0.00038559295,0.00003305331,0.00013475753,0.00011838412,0.0083660185,0.00008243076],"study_design_scores_gemma":[0.0047462936,0.0033813794,0.986923,0.00008574644,0.00048522008,0.00090087176,0.00014927251,0.00002868167,0.0002334198,0.000101503065,0.0029247093,0.000039918305],"about_ca_topic_score_codex":0.009539307,"about_ca_topic_score_gemma":0.1274261,"teacher_disagreement_score":0.1178868,"about_ca_system_score_codex":0.00094141206,"about_ca_system_score_gemma":0.00074314995,"threshold_uncertainty_score":0.99705625},"labels":[],"label_agreement":null},{"id":"W3009715544","doi":"10.1186/s41182-020-0193-2","title":"Entamoeba histolytica and amoebic liver abscess in northern Sri Lanka: a public health problem","year":2020,"lang":"en","type":"review","venue":"Tropical Medicine and Health","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton General Hospital; Health Sciences Centre; Mount Sinai Hospital; Hamilton Health Sciences; University of Toronto; McMaster University","funders":"Royal College of Surgeons in Ireland","keywords":"Entamoeba histolytica; Sri lanka; Amoebic liver abscess; Public health; Amoebiasis; Liver abscess; Medicine; Biology; Microbiology; Abscess; Geography; Pathology; Surgery; Environmental planning","score_opus":0.19010722057929913,"score_gpt":0.4172636190797687,"score_spread":0.2271563985004696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3009715544","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020353394,0.966155,0.00004163239,0.030465305,0.000108649285,0.0019734332,0.000015406116,0.000069657304,0.00096738146],"genre_scores_gemma":[0.0020222734,0.99265283,0.00031740245,0.004067057,0.00049913465,0.00013110989,0.00014307906,0.000045358058,0.00012172587],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99701715,0.0002299864,0.0010811221,0.00068747374,0.0003208163,0.00066346076],"domain_scores_gemma":[0.99793553,0.00014704654,0.000393706,0.00028853555,0.000050534698,0.0011846243],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002984797,0.00048376867,0.003201471,0.000381303,0.00017791253,0.00001616798,0.00008065742,0.00023461867,0.000113374175],"category_scores_gemma":[0.000081128586,0.00031123712,0.00012760835,0.0004760709,0.00026182787,0.000052009986,0.000078746096,0.0009207894,0.000039250182],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016115951,0.00027180585,0.013428913,0.025630422,0.00013757228,0.0002150599,0.0014364318,3.3052998e-9,5.560168e-9,0.00084204576,0.0013126004,0.956709],"study_design_scores_gemma":[0.0023267812,0.0024129266,0.0109649245,0.012652412,0.00027821364,0.00060700596,0.00018263773,0.0000074262643,2.0782125e-9,0.000040985295,0.97033155,0.00019513021],"about_ca_topic_score_codex":0.0028773053,"about_ca_topic_score_gemma":0.003736087,"teacher_disagreement_score":0.96901894,"about_ca_system_score_codex":0.00090179796,"about_ca_system_score_gemma":0.0018289918,"threshold_uncertainty_score":0.99993396},"labels":[],"label_agreement":null},{"id":"W3015245443","doi":"10.1177/0846537120914263","title":"Use of Tissue Plasminogen Activator in Abdominal Abscesses in Children—A Single-Center Randomized Control Trial","year":2020,"lang":"en","type":"article","venue":"Canadian Association of Radiologists Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Medicine; Randomized controlled trial; Surgery; Saline; Single Center; Abscess; Catheter; Anesthesia","score_opus":0.025837277100110186,"score_gpt":0.2575699839991655,"score_spread":0.23173270689905529,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015245443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99689215,0.00006150499,0.00008688476,0.0016399047,0.00016224149,0.00082597753,0.00008767861,0.0000041716644,0.00023947668],"genre_scores_gemma":[0.99922365,0.000054187913,0.00016408169,0.00028234444,0.00016404984,0.000013711114,0.000021695183,0.000009161008,0.000067135916],"study_design_codex":"observational","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9984966,0.00032868597,0.0006415811,0.00012162101,0.00017018308,0.00024132304],"domain_scores_gemma":[0.9985222,0.00040673255,0.0006196284,0.00006410529,0.00013455107,0.00025275603],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005637966,0.00011408734,0.00078814,0.00031949597,0.00003580238,0.00001651821,0.00005739887,0.00016368717,0.0001294509],"category_scores_gemma":[0.0032990878,0.00009560506,0.00014736176,0.00020741485,0.00006610008,0.00011889656,0.0000042401134,0.0002719222,0.0000033731494],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.06867957,0.00023027422,0.9282298,0.000009171818,0.00044672174,0.00007328582,0.00022244864,0.000064098545,0.00033186527,0.000023237435,0.0008675516,0.0008219528],"study_design_scores_gemma":[0.80187863,0.00088100147,0.19537508,0.00007682289,0.00016568141,0.00016300743,0.000040642877,0.00015245104,0.0006217573,0.000025733318,0.0005100165,0.00010914228],"about_ca_topic_score_codex":0.007307315,"about_ca_topic_score_gemma":0.007425098,"teacher_disagreement_score":0.73319906,"about_ca_system_score_codex":0.001175064,"about_ca_system_score_gemma":0.0005959137,"threshold_uncertainty_score":0.9993031},"labels":[],"label_agreement":null},{"id":"W3016628590","doi":"10.1096/fasebj.2020.34.s1.00015","title":"Role of MUC2 mucin associated FCGBP in innate host defense against <i>Entamoeba histolytica</i>","year":2020,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Mucin; Mucin 2; Mucus; Entamoeba histolytica; Biology; Innate immune system; Microbiology; Biochemistry; Chemistry; Gene expression","score_opus":0.01404825860024826,"score_gpt":0.23693770860355207,"score_spread":0.22288945000330382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3016628590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988336,0.00037041138,0.0000245861,0.0020006916,0.00009368317,0.00017366461,0.00001673346,0.000021840431,0.008962373],"genre_scores_gemma":[0.99805474,0.00013307191,0.00006577662,0.0013891659,0.00010161292,0.0000033810445,0.0000108818795,0.000018999503,0.0002223952],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99893194,0.000107686996,0.0003629612,0.00011499354,0.00024533743,0.00023706567],"domain_scores_gemma":[0.99930906,0.00006436591,0.00021038916,0.00014337656,0.000103099745,0.00016972916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029310893,0.00012803092,0.0002901615,0.00009065404,0.00012366392,0.000013915939,0.00009481287,0.00006447456,0.00015233511],"category_scores_gemma":[0.00022201132,0.00008401143,0.00014102705,0.00033592267,0.00007762369,0.0000615442,0.00003734621,0.00047392613,0.000058599875],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011014235,0.0020828464,0.5336043,0.00004884436,0.0011743435,0.001291003,0.0075078066,0.00021405121,0.4386853,0.00043929197,0.005265433,0.008585328],"study_design_scores_gemma":[0.044857275,0.0049908943,0.64714503,0.0014981079,0.0023447163,0.0028503165,0.010455064,0.011687803,0.2581236,0.0016036388,0.013220525,0.0012230414],"about_ca_topic_score_codex":0.00007528232,"about_ca_topic_score_gemma":0.000030371944,"teacher_disagreement_score":0.18056169,"about_ca_system_score_codex":0.0002154655,"about_ca_system_score_gemma":0.00014069672,"threshold_uncertainty_score":0.34258866},"labels":[],"label_agreement":null},{"id":"W3019295100","doi":"10.1016/s2468-2667(20)30091-8","title":"Inuit communities can beat COVID-19 and tuberculosis","year":2020,"lang":"en","type":"article","venue":"The Lancet Public Health","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University","funders":"","keywords":"Curfew; Tuberculosis; Coronavirus disease 2019 (COVID-19); Public health; Indigenous; Medicine; Infectious disease (medical specialty); Geography; Environmental health; Socioeconomics; Disease; Sociology; Nursing","score_opus":0.18645285953007038,"score_gpt":0.3705001147908286,"score_spread":0.18404725526075824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3019295100","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40530604,0.0003644441,0.00008886076,0.5914151,0.000032712083,0.0002647068,0.00006395143,0.00010756197,0.0023566328],"genre_scores_gemma":[0.8634537,0.0007035329,0.00010975104,0.13527752,0.00023358586,0.000025167423,0.00004951133,0.000009815342,0.0001374275],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.999179,0.00017823465,0.00013654838,0.00009424576,0.00011825241,0.00029369444],"domain_scores_gemma":[0.9989976,0.000109336805,0.00004654785,0.00027978467,0.000030134774,0.0005365919],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041228445,0.000089829315,0.00029040614,0.000035888,0.0003961927,0.000036780533,0.000079667225,0.00003237285,0.00021150653],"category_scores_gemma":[0.00012982947,0.000055175475,0.000027595022,0.00019305808,0.00011720797,0.00004362313,0.000065062646,0.0002234963,0.000016767573],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011315387,0.000293776,0.6629974,0.0010503195,0.00050306885,0.00002923517,0.14438482,0.000006820089,0.0000074766517,0.016662791,0.12467002,0.04928112],"study_design_scores_gemma":[0.004679602,0.0011832622,0.14960268,0.000050196686,0.00007582426,0.00030472403,0.014218941,0.0005922264,0.0000057569905,0.00063767034,0.8284439,0.00020523426],"about_ca_topic_score_codex":0.009621368,"about_ca_topic_score_gemma":0.0024703776,"teacher_disagreement_score":0.70377386,"about_ca_system_score_codex":0.00022326347,"about_ca_system_score_gemma":0.0007394896,"threshold_uncertainty_score":0.99697363},"labels":[],"label_agreement":null},{"id":"W3023017096","doi":"10.1016/b978-0-323-01205-8.50068-5","title":"Liver Disease","year":2003,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Liver disease; Medicine; Internal medicine","score_opus":0.015821457839349712,"score_gpt":0.24709439158786142,"score_spread":0.2312729337485117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3023017096","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000044488937,0.0021649105,0.0000029852063,0.00006460429,0.0002869759,0.0006236071,0.00003255859,0.00006727098,0.9967126],"genre_scores_gemma":[0.0013935819,0.00024388457,0.00017816052,0.0011041418,0.000255178,0.000040462386,0.000059564354,0.000086692184,0.99663836],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99902475,0.000009372324,0.00021538822,0.0003299343,0.00022338789,0.00019717355],"domain_scores_gemma":[0.9989858,0.00001601346,0.00009163255,0.0005177246,0.00008342584,0.0003053484],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000045983357,0.00032081248,0.00038708159,0.00011874109,0.000095509706,0.000012358773,0.000042396907,0.0001926442,0.0022480434],"category_scores_gemma":[0.000011641696,0.00026089724,0.00031921852,0.000006607361,0.000096121665,0.00001515648,0.000030014891,0.0002918406,0.0016333126],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043668013,0.00004730072,0.00022085031,0.00012005327,0.0003685258,0.0012004513,0.00002580729,4.8282153e-8,7.5947304e-7,0.008196083,0.0014229708,0.9883535],"study_design_scores_gemma":[0.0005775966,0.0000948099,0.0003850866,0.00037630327,0.0009526842,0.00009584485,6.627904e-7,0.0000013173953,0.00000420773,0.0033444786,0.9939472,0.00021977823],"about_ca_topic_score_codex":5.1512063e-7,"about_ca_topic_score_gemma":0.00000316127,"teacher_disagreement_score":0.99252427,"about_ca_system_score_codex":0.00014265373,"about_ca_system_score_gemma":0.00014813128,"threshold_uncertainty_score":0.9999843},"labels":[],"label_agreement":null},{"id":"W3033642841","doi":"10.1002/jlb.3mr0420-465r","title":"Role of inflammasomes in innate host defense against <i>Entamoeba histolytica</i>","year":2020,"lang":"en","type":"review","venue":"Journal of Leukocyte Biology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Entamoeba histolytica; Inflammasome; Biology; Innate immune system; Immune system; Mucus; Cathelicidin; Immunology; Microbiology; Virulence; Pathogenesis; Caspase; Inflammation; Apoptosis; Genetics; Programmed cell death; Gene","score_opus":0.024776096123044083,"score_gpt":0.3209017690614423,"score_spread":0.2961256729383982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033642841","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0038095997,0.99250585,0.000005453731,0.00009185125,0.0003548772,0.00035881173,0.000022776841,0.00000895948,0.0028418314],"genre_scores_gemma":[0.0054192184,0.9936924,0.0002536119,0.000104571496,0.0003390409,0.000009492013,0.000038631526,0.000037952355,0.000105095474],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975987,0.00020898,0.0015605419,0.00021854491,0.00014583228,0.00026740544],"domain_scores_gemma":[0.9976501,0.00019734647,0.0015671423,0.00023068015,0.0001796895,0.00017503102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027171522,0.0003512484,0.0029328107,0.0006596137,0.000026674832,0.000005008631,0.00017252438,0.00043633845,0.00004676119],"category_scores_gemma":[0.00024079758,0.00023554236,0.00081253727,0.00040076868,0.00015521131,0.000052065763,0.00007864208,0.00080665277,0.00004216541],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025998877,0.00042039875,0.0040063825,0.002885715,0.0015571165,0.0013295286,0.00012483115,7.0285625e-7,0.0002524689,0.00032257172,0.00032510838,0.9885152],"study_design_scores_gemma":[0.0015848243,0.000977991,0.00022513827,0.004401372,0.0011951491,0.0016116366,0.000032592267,0.0000022790218,0.00005394927,0.00004710266,0.98971057,0.00015741187],"about_ca_topic_score_codex":0.000024596115,"about_ca_topic_score_gemma":0.000010469252,"teacher_disagreement_score":0.9893854,"about_ca_system_score_codex":0.0006411943,"about_ca_system_score_gemma":0.001131894,"threshold_uncertainty_score":0.9605139},"labels":[],"label_agreement":null},{"id":"W3069136492","doi":"10.1093/ofid/ofaa336","title":"An 82-Year-Old Male With a Liver Abscess","year":2020,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Manitoba Health; University of Manitoba","funders":"University of Manitoba","keywords":"Medicine; Abscess; Liver abscess; General surgery; Surgery; Internal medicine","score_opus":0.013719283687205543,"score_gpt":0.2764211477614558,"score_spread":0.2627018640742503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3069136492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8723106,0.000116675794,0.0003324524,0.0009281611,0.000083457264,0.0012294523,0.00009664589,0.0002445417,0.12465806],"genre_scores_gemma":[0.9950072,0.000028647175,0.00014882909,0.0027866566,0.00010211095,0.00014300772,0.000107604516,0.000041183266,0.0016347459],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990345,0.00002967166,0.00013364907,0.0003575196,0.0001701599,0.00027448815],"domain_scores_gemma":[0.9990341,0.000018748884,0.000063328094,0.0003181669,0.00009421067,0.000471465],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000023649727,0.00018868416,0.0002719296,0.000048922364,0.00025701057,0.00015116131,0.00013036706,0.000050560844,0.0029286593],"category_scores_gemma":[0.000026284837,0.00013942442,0.0000797122,0.00026129358,0.000071200106,0.00043033055,0.000096853975,0.000104941675,0.00055317587],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046772847,0.0011213454,0.9891961,0.0000438851,0.00022278157,0.00032998165,0.00010056237,0.000027796425,0.000024698382,0.0013202402,0.004755779,0.0023890808],"study_design_scores_gemma":[0.014668266,0.009386738,0.9461061,0.0002053223,0.0014611467,0.00085230434,0.0009322469,0.00086444634,0.00041675818,0.00044251516,0.023876974,0.0007871888],"about_ca_topic_score_codex":0.00086112047,"about_ca_topic_score_gemma":0.00017098436,"teacher_disagreement_score":0.123023316,"about_ca_system_score_codex":0.000066361274,"about_ca_system_score_gemma":0.00013342105,"threshold_uncertainty_score":0.9979828},"labels":[],"label_agreement":null},{"id":"W3088671705","doi":"10.1111/cmi.13267","title":"<scp>Rab7D</scp> small <scp>GTPase</scp> is involved in phago‐, trogocytosis and cytoskeletal reorganization in the enteric protozoan <scp> <i>Entamoeba histolytica</i> </scp>","year":2020,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"Science and Technology Research Partnership for Sustainable Development; Japan Society for the Promotion of Science; Japan Agency for Medical Research and Development; Naito Foundation","keywords":"Biology; Rab; Entamoeba histolytica; Cell biology; Phagosome; GTPase; Vacuole; Gene silencing; Microbiology; Gene; Phagocytosis; Genetics; Cytoplasm","score_opus":0.016776304979230147,"score_gpt":0.21853779608887133,"score_spread":0.2017614911096412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3088671705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917201,0.0017483319,0.00060410926,0.000742901,0.00024719833,0.002741779,0.00008609904,0.00012528586,0.0019842358],"genre_scores_gemma":[0.99201345,0.0002954905,0.00046498797,0.004162914,0.00023187598,0.00030261077,0.0009251727,0.000102743,0.001500728],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966165,0.00046684744,0.0008321719,0.0010271935,0.00014666501,0.0009106169],"domain_scores_gemma":[0.99818057,0.00054139184,0.0003169508,0.00056273193,0.00013388564,0.00026446034],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038161682,0.0006043602,0.00089046155,0.00035966613,0.00021713284,0.000059842107,0.0003367623,0.00050480914,0.000049300943],"category_scores_gemma":[0.00081791444,0.0004900551,0.0002146614,0.0011032553,0.00039054887,0.00013359258,0.00022485749,0.00074212573,0.00028769157],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024391482,0.0011924421,0.17881483,0.0003113903,0.00027386873,0.00052087207,0.008851157,0.0000037300413,0.7957255,0.00014601102,0.013818318,0.0003174874],"study_design_scores_gemma":[0.019189427,0.0041248812,0.02544602,0.00035077764,0.0010818548,0.0012214382,0.009573351,0.0005428485,0.5990875,0.0002636254,0.33883923,0.00027908842],"about_ca_topic_score_codex":0.0001768667,"about_ca_topic_score_gemma":0.00012757636,"teacher_disagreement_score":0.3250209,"about_ca_system_score_codex":0.00034074447,"about_ca_system_score_gemma":0.00019430772,"threshold_uncertainty_score":0.9997551},"labels":[],"label_agreement":null},{"id":"W3091773555","doi":"10.1111/acem.14151","title":"Comparison of the Loop Technique With Incision and Drainage for Skin and Soft Tissue Abscesses: A Systematic Review and Meta‐analysis","year":2020,"lang":"en","type":"review","venue":"Academic Emergency Medicine","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Incision and drainage; Cochrane Library; Randomized controlled trial; Abscess; Surgery; Soft tissue; Odds ratio; Meta-analysis; Relative risk; MEDLINE; Confidence interval; Internal medicine","score_opus":0.09830977071937548,"score_gpt":0.4569125693452787,"score_spread":0.3586027986259032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3091773555","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000006303002,0.9890088,0.0017824668,0.0006221622,0.00003624324,0.00833296,0.000041039395,0.0000223199,0.00014774554],"genre_scores_gemma":[0.00078533404,0.996676,0.00019501413,0.00011290245,0.00005014694,0.0015654739,0.00005383324,0.00004153929,0.00051970605],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99706954,0.00021161317,0.0017090484,0.0004995214,0.00032618045,0.0001840859],"domain_scores_gemma":[0.99756694,0.00036140127,0.0013243279,0.00044437425,0.00014424756,0.0001586838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086464535,0.0004903691,0.007412395,0.00024518595,0.00011702105,9.013292e-7,0.00014926227,0.00031984615,0.00011525942],"category_scores_gemma":[0.0006571387,0.00021280143,0.00037980767,0.0012109032,0.00022411718,0.000044702218,0.00011190236,0.0005825148,9.162721e-7],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000071433983,0.00003373291,0.00016737706,0.95440006,0.041809812,0.0000032072098,0.00020561475,3.6652917e-8,0.0000016260149,0.0000977174,0.00042841784,0.0028452596],"study_design_scores_gemma":[0.00029060122,0.00050362013,0.000011601335,0.10946035,0.8510948,0.00015700872,0.000083431754,0.000011018895,0.0000039461306,0.000064866246,0.038140792,0.00017798365],"about_ca_topic_score_codex":0.000067233006,"about_ca_topic_score_gemma":0.000012550813,"teacher_disagreement_score":0.8449397,"about_ca_system_score_codex":0.000034871748,"about_ca_system_score_gemma":0.00008277022,"threshold_uncertainty_score":0.8677791},"labels":[],"label_agreement":null},{"id":"W3108680975","doi":"","title":"CpG-Oligodeoxynucleotide Is a Potent Adjuvant with an Gal-Inhibitable Lectin Vaccine against Amoebic Liver Abscess in Gerbils.","year":2006,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"","keywords":"Biology; Lectin; CpG Oligodeoxynucleotide; Adjuvant; Microbiology; Liver abscess; Immunology; Virology; Nonalcoholic steatohepatitis; Abscess; Pathology; Medicine","score_opus":0.009184558846379962,"score_gpt":0.24049299194690504,"score_spread":0.23130843310052507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3108680975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880912,0.00021599389,0.00032198927,0.00011617901,0.00011029773,0.00043267958,0.000005364301,0.000119193144,0.010587139],"genre_scores_gemma":[0.9978321,0.00025697192,0.00015743506,0.0003456827,0.00007847289,0.00005437643,0.000057026624,0.00002984618,0.0011880877],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99885243,0.00009717821,0.0002946323,0.00028989746,0.00015422635,0.00031163622],"domain_scores_gemma":[0.99927366,0.000029984503,0.00010250267,0.0003383128,0.0001413133,0.0001142171],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020773255,0.00023852481,0.00033765024,0.00030284104,0.00032352426,0.000054099215,0.000033019805,0.000115556875,0.00023299005],"category_scores_gemma":[0.000018864099,0.00018636408,0.00006511757,0.00046207372,0.000055971836,0.00033549077,0.000036466427,0.00034135368,0.000036403486],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000525735,0.0025017636,0.9810943,0.00009205698,0.00010845312,0.00012926385,0.00032759036,0.00015024214,0.0020225504,0.000117672884,0.0006898397,0.012240523],"study_design_scores_gemma":[0.004358076,0.001020733,0.98677665,0.00016107144,0.00010287272,0.00033112976,0.00009532075,0.000964201,0.0038536864,0.00011570094,0.0019940608,0.00022648755],"about_ca_topic_score_codex":0.03782119,"about_ca_topic_score_gemma":0.007596592,"teacher_disagreement_score":0.030224597,"about_ca_system_score_codex":0.0002023668,"about_ca_system_score_gemma":0.00007066709,"threshold_uncertainty_score":0.968586},"labels":[],"label_agreement":null},{"id":"W3116628570","doi":"10.1096/fasebj.31.1_supplement.55.2","title":"<i>Entamoeba histolytica</i> Stimulates the Release of the Alarmin Molecule HMGB1 by a PI3 Kinase Dependent Mechanism","year":2017,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"HMGB1; Secretion; Entamoeba histolytica; Biology; Immune system; Inflammation; RELB; Cell biology; Inflammasome; Extracellular; Immunology; NFKB1","score_opus":0.011937078273964558,"score_gpt":0.2569740578929915,"score_spread":0.24503697961902693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3116628570","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988742,0.000388788,0.00073125213,0.0051587676,0.00046008147,0.00040094377,0.00003494813,0.000012415275,0.0040707896],"genre_scores_gemma":[0.99584365,0.00010762336,0.00006590552,0.0005895873,0.0001265513,0.000010320528,0.0000024331325,0.00002103435,0.0032328933],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988062,0.0001297364,0.00027145556,0.00013079985,0.00040971616,0.0002521167],"domain_scores_gemma":[0.99837667,0.00008493266,0.00039343679,0.00091376575,0.00010411579,0.00012706537],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0004518115,0.00016135986,0.00020506624,0.00002890754,0.0015215651,0.00007112374,0.00046103756,0.000055368106,0.00023262741],"category_scores_gemma":[0.00015464061,0.00006661165,0.00023404544,0.00005153685,0.0002598946,0.000076201315,0.00014506535,0.00047107355,0.00003587306],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014311665,0.003701111,0.057188082,0.00009116343,0.002931538,0.0014718657,0.0025717278,0.00023844266,0.8628465,0.0065191723,0.04272793,0.018281298],"study_design_scores_gemma":[0.008346754,0.0008945778,0.0154238995,0.00037093795,0.002452715,0.0052161347,0.0009002013,0.0018909025,0.95480156,0.0056695053,0.0037069023,0.0003259244],"about_ca_topic_score_codex":0.00025453497,"about_ca_topic_score_gemma":0.000017816401,"teacher_disagreement_score":0.09195504,"about_ca_system_score_codex":0.00012827608,"about_ca_system_score_gemma":0.00013564843,"threshold_uncertainty_score":0.99977833},"labels":[],"label_agreement":null},{"id":"W3119660249","doi":"10.1093/ofid/ofaa439.915","title":"723. Epidemiology, Risk Factors, and Treatment Considerations for Pyogenic Liver Abscess (PLA) in the Calgary Health Zone (CHZ) Revisited: A Population-Based Study","year":2020,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Medicine; Epidemiology; Internal medicine; Population; Incidence (geometry); Pyogenic liver abscess; Cohort; Mortality rate; Gastroenterology; Surgery; Liver abscess; Abscess","score_opus":0.06893590616408717,"score_gpt":0.36141458487763123,"score_spread":0.29247867871354405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119660249","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868832,0.0010051106,0.0006263513,0.0035578357,0.000056190267,0.007123587,0.0004684296,0.00007576146,0.00020352456],"genre_scores_gemma":[0.9944768,0.00013427656,0.00018579312,0.0036688282,0.00004937718,0.0009831297,0.00045023835,0.000025474728,0.000026088477],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981924,0.00048718567,0.00045081426,0.0004514159,0.00010128724,0.00031684115],"domain_scores_gemma":[0.997703,0.0014509608,0.00023111941,0.00030558536,0.00006181311,0.00024750733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000257697,0.00026006464,0.00063813536,0.000098024655,0.00079045113,0.00007419603,0.000066723966,0.00006022335,0.00010459036],"category_scores_gemma":[0.0008035973,0.00016320753,0.00015379181,0.00021612707,0.000047126083,0.00013101597,0.000047597692,0.000116323725,0.000008600508],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015418288,0.00207645,0.9935341,0.000034526875,0.00027617963,0.000026715841,0.00046065255,0.00011574559,2.085797e-7,0.00043075244,0.0009540313,0.001936485],"study_design_scores_gemma":[0.0057500605,0.0040000235,0.9863861,0.00003738981,0.0005788723,0.000022612841,0.00065489137,0.0014793989,0.0000013852055,0.00051614956,0.0004247979,0.00014827326],"about_ca_topic_score_codex":0.024190325,"about_ca_topic_score_gemma":0.008988096,"teacher_disagreement_score":0.015202229,"about_ca_system_score_codex":0.000257568,"about_ca_system_score_gemma":0.00026486773,"threshold_uncertainty_score":0.9823077},"labels":[],"label_agreement":null},{"id":"W3120439033","doi":"10.1007/978-1-0716-1182-1_15","title":"A Murine Model for Chronic A. fumigatus Airway Infections","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Aspergillus fumigatus; Microbiology; Antifungal; Aspergillosis; Cystic fibrosis; Lung; Aspergillus; Biology; Immunology; Medicine; Internal medicine","score_opus":0.03725866763936185,"score_gpt":0.4126315537150922,"score_spread":0.3753728860757303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120439033","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006702617,0.0030498144,0.8695117,0.0001632791,0.0003631086,0.000847338,0.00005817936,0.00005040673,0.1258891],"genre_scores_gemma":[0.0004356217,0.00063616363,0.7177133,0.00034037535,0.00020374033,0.00044135508,0.0006062361,0.00011439876,0.2795088],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984449,0.00011971692,0.0004134146,0.00060766924,0.000062697734,0.00035157637],"domain_scores_gemma":[0.9988822,0.00016667409,0.00013110635,0.0005690672,0.0001557954,0.00009516967],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00034765364,0.00037102556,0.0008077638,0.00038164895,0.00007364103,0.0000066959988,0.000068166475,0.000798584,0.00035048326],"category_scores_gemma":[0.0001994601,0.0003395794,0.00045870652,0.00007834405,0.00014424647,0.000011546531,0.000104039995,0.0005254663,0.000018172692],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001736107,0.00080279156,0.00044937155,0.00067313586,0.0029627858,0.0006077743,0.00009826458,0.0013945905,0.06342095,0.7674976,0.00041394058,0.16150516],"study_design_scores_gemma":[0.0123685645,0.0059980736,0.00007537299,0.0012326903,0.003354458,0.0013503863,0.000013346673,0.04906776,0.02768036,0.34093654,0.55587006,0.002052359],"about_ca_topic_score_codex":0.000025683328,"about_ca_topic_score_gemma":0.00006742112,"teacher_disagreement_score":0.55545616,"about_ca_system_score_codex":0.0004479011,"about_ca_system_score_gemma":0.00048177264,"threshold_uncertainty_score":0.99990565},"labels":[],"label_agreement":null},{"id":"W3126804828","doi":"10.1093/molbev/msab020","title":"The <i>Mastigamoeba balamuthi</i> Genome and the Nature of the Free-Living Ancestor of <i>Entamoeba</i>","year":2021,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Alberta","funders":"Univerzita Karlova v Praze; Grantová Agentura České Republiky; Biotechnology and Biological Sciences Research Council; European Regional Development Fund; Horizon 2020 Framework Programme; Universiteit Gent","keywords":"Biology; Lineage (genetic); Entamoeba; Gene; Most recent common ancestor; Genome; Adaptation (eye); Phylogenetics; Horizontal gene transfer; Evolutionary biology; Entamoeba histolytica; Genetics; Phylogenetic tree; Gene family","score_opus":0.0028404870534655124,"score_gpt":0.23030502300824873,"score_spread":0.22746453595478322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3126804828","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97434163,0.020943502,0.0013811153,0.0018370356,0.00021970025,0.00019884574,0.000013877034,0.0000058873684,0.0010584358],"genre_scores_gemma":[0.9990271,0.0003730845,0.000121948025,0.00027565396,0.000027489039,0.000010808339,0.0000066363646,0.0000043874265,0.00015290466],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993993,0.00016327534,0.00013816103,0.00013016842,0.0000624585,0.00010664764],"domain_scores_gemma":[0.9993915,0.00012611154,0.00008904073,0.00028543553,0.000086905275,0.000021040547],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002128369,0.000075187,0.00014811638,0.0000144763135,0.00023358516,0.0000038547196,0.000058934787,0.00012733506,0.000003843875],"category_scores_gemma":[0.0002475755,0.000033921602,0.00007237,0.00013095497,0.0006993728,0.00001434731,0.000111939524,0.00017931628,3.802132e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029968258,0.00018215731,0.61589754,0.00009644982,0.00068067934,0.0000121654875,0.0004451485,0.000013459947,0.2510488,0.12948498,0.00019932062,0.0016396282],"study_design_scores_gemma":[0.00338455,0.00026986448,0.95480496,0.00014495497,0.00055844465,0.00038087336,0.00049491995,0.00023482462,0.020806745,0.015846213,0.0029492406,0.00012441147],"about_ca_topic_score_codex":0.00006010788,"about_ca_topic_score_gemma":0.000033060813,"teacher_disagreement_score":0.33890742,"about_ca_system_score_codex":0.00001841267,"about_ca_system_score_gemma":0.000057398393,"threshold_uncertainty_score":0.25768682},"labels":[],"label_agreement":null},{"id":"W3135403057","doi":"10.1093/jcag/gwab002.023","title":"A24 FCGBP MAINTAINS MUC2 MUCUS STRUCTURAL INTEGRITY BY STABILIZING THE MUCUS LAYER IN RESPONSE TO THE COLONIC PATHOGEN, <i>ENTAMOEBA HISTOLYTICA</i>","year":2021,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Mucin; Mucus; Mucin 2; Biology; Entamoeba histolytica; Innate immune system; Microbiology; Cell biology; Biochemistry; Gene expression; Receptor; Gene","score_opus":0.009597317186945033,"score_gpt":0.252066341307009,"score_spread":0.24246902412006396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3135403057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8815129,0.00006277105,0.00001668532,0.11731479,0.0006447328,0.00023780594,0.00011146911,0.0000024898131,0.00009637074],"genre_scores_gemma":[0.9932015,0.0000117803565,0.000089749716,0.0059057972,0.0000867937,0.0000073055025,0.0000064258634,0.000012812006,0.00067784224],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974332,0.0011506943,0.0005462925,0.00013184869,0.00032820454,0.00040976287],"domain_scores_gemma":[0.9982043,0.00028717084,0.0005549733,0.00029092687,0.00046121387,0.00020144436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017936474,0.00013054584,0.00035304305,0.00015003925,0.00024101457,0.000024063322,0.00023351163,0.00011873259,0.00010226197],"category_scores_gemma":[0.001593626,0.00007275169,0.00022809261,0.00027505535,0.00008114896,0.0000510585,0.000056029417,0.0007407368,0.0000046825216],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010180603,0.000091001864,0.9772158,0.000005320277,0.00029740404,0.00010481553,0.00088236976,0.0000855262,0.0031361668,0.000076779994,0.016937993,0.0001487415],"study_design_scores_gemma":[0.002871578,0.0009786797,0.9698869,0.000059455593,0.00024845533,0.0007916384,0.0010977337,0.00007661807,0.00026370081,0.00014945504,0.023514198,0.00006161541],"about_ca_topic_score_codex":0.006808917,"about_ca_topic_score_gemma":0.5526144,"teacher_disagreement_score":0.54580545,"about_ca_system_score_codex":0.0045506083,"about_ca_system_score_gemma":0.0011221911,"threshold_uncertainty_score":0.99980485},"labels":[],"label_agreement":null},{"id":"W3140559744","doi":"10.1002/emp2.12412","title":"Point‐of‐care ultrasound diagnosis of a pyogenic liver abscess in the emergency department","year":2021,"lang":"en","type":"article","venue":"Journal of the American College of Emergency Physicians Open","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brandon Regional Health Authority","funders":"","keywords":"Emergency department; Point of care ultrasound; Medicine; Point of care; Pyogenic liver abscess; Radiology; Emergency physician; Patient care; Ultrasound; Liver abscess; General surgery; Abscess; Medical emergency; Emergency medicine; Intensive care medicine; Surgery; Pathology; Nursing","score_opus":0.019118464887716183,"score_gpt":0.31812227311953356,"score_spread":0.2990038082318174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3140559744","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931742,0.0018412708,0.000015584877,0.00072175835,0.0004583293,0.0005872716,0.00019329308,0.0000014795454,0.0030067894],"genre_scores_gemma":[0.9943958,0.0047486634,0.00034897588,0.000092295784,0.00009397544,0.000034389832,0.000004561697,0.000019026713,0.0002622923],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99801415,0.00024262012,0.0009341229,0.00015076352,0.00047054974,0.00018781287],"domain_scores_gemma":[0.9971626,0.000120233504,0.0014983284,0.000533926,0.00064038683,0.000044553017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002449718,0.00016807432,0.0007644762,0.000103304345,0.00008611535,0.000003397646,0.00061782467,0.000026201305,0.00048119258],"category_scores_gemma":[0.000139063,0.00010136943,0.00062178075,0.0014213248,0.0001256868,0.0001375572,0.00013866294,0.00018344652,0.0000022861875],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010784492,0.008465789,0.9356976,0.00039336956,0.0031203995,0.00030961467,0.0051635825,0.0003220449,0.009989781,0.0008796935,0.02663723,0.007942431],"study_design_scores_gemma":[0.0025256209,0.0027684432,0.9283622,0.00087246584,0.0017570194,0.00022877692,0.024221845,0.000014476735,0.035385072,0.00087053276,0.0027430076,0.00025055264],"about_ca_topic_score_codex":0.00064376596,"about_ca_topic_score_gemma":0.0005947824,"teacher_disagreement_score":0.025395293,"about_ca_system_score_codex":0.00009009781,"about_ca_system_score_gemma":0.00025952395,"threshold_uncertainty_score":0.52687216},"labels":[],"label_agreement":null},{"id":"W314505570","doi":"10.1007/978-4-431-55200-0_24","title":"Innate Host Defenses in the Gut","year":2014,"lang":"en","type":"book-chapter","venue":"","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Host (biology); Innate immune system; Biology; Ecology; Immunology; Immune system","score_opus":0.02084531396429592,"score_gpt":0.2608688985150807,"score_spread":0.2400235845507848,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W314505570","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00077242975,0.0001308146,0.000054852942,0.0005102837,0.0001028415,0.00029933522,0.0000046350756,0.000029455532,0.99809533],"genre_scores_gemma":[0.22228214,0.00011429775,0.00006298499,0.0012796788,0.00013668687,0.0000126242,0.000032017688,0.000021178837,0.7760584],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99944896,0.000008466197,0.00014787311,0.00014963378,0.00013639465,0.000108673834],"domain_scores_gemma":[0.9995182,0.000059959275,0.0000462923,0.00030957087,0.000038004055,0.000027971862],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000087211156,0.00015818208,0.00022534365,0.000114212555,0.00004165139,0.000009355602,0.00004568853,0.00015669811,0.0016619094],"category_scores_gemma":[0.000014954078,0.00008229929,0.00009584254,0.00001854326,0.000049204446,0.000009305335,0.000018677261,0.00022522526,0.0011109236],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005790519,0.00014277006,0.005689332,0.000081748185,0.0003848806,0.00051545363,0.00025602282,3.6167881e-7,0.000009312869,0.9479197,0.028664155,0.016278338],"study_design_scores_gemma":[0.00092106283,0.00028652034,0.007949759,0.00018531599,0.00021963257,0.00023770615,0.000021827891,0.0000046890564,0.0000078456305,0.004506807,0.985508,0.00015079878],"about_ca_topic_score_codex":0.0001324572,"about_ca_topic_score_gemma":0.0001561523,"teacher_disagreement_score":0.95684385,"about_ca_system_score_codex":0.000044656725,"about_ca_system_score_gemma":0.000035883506,"threshold_uncertainty_score":0.9996668},"labels":[],"label_agreement":null},{"id":"W3158439833","doi":"10.1038/s41385-021-00408-4","title":"Entamoeba histolytica exploits the autophagy pathway in macrophages to trigger inflammation in disease pathogenesis","year":2021,"lang":"en","type":"article","venue":"Mucosal Immunology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Vancouver Infectious Diseases Centre","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Autophagy; ATG16L1; Entamoeba histolytica; Inflammasome; Cell biology; Downregulation and upregulation; Inflammation; Pathogenesis; Biology; Intracellular parasite; Intracellular; Caspase 1; Endosome; Macrophage; Immunology; Apoptosis; Biochemistry","score_opus":0.01307061870682816,"score_gpt":0.2596183381158429,"score_spread":0.24654771940901474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3158439833","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99259377,0.001981813,0.00007073307,0.003825013,0.00033473087,0.00041072123,0.000010994499,0.000039776485,0.00073246605],"genre_scores_gemma":[0.99719924,0.00013145711,0.00012844265,0.00035885914,0.000058867045,0.0002556252,0.00005810886,0.000019949268,0.0017894645],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99881476,0.00017197366,0.00031792375,0.00028381523,0.00011171398,0.00029983174],"domain_scores_gemma":[0.9993242,0.00009482181,0.000046470755,0.00038834213,0.00007119692,0.000074990225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013086379,0.00014967966,0.00026292974,0.00022260252,0.00007341465,0.00001309331,0.00007110272,0.00009411008,0.0003793986],"category_scores_gemma":[0.00025302585,0.000112748916,0.00007798042,0.0004868764,0.000059929505,0.00006530373,0.00008616062,0.00017495453,0.00025003366],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019984634,0.0032871403,0.24741615,0.00013625016,0.0004501768,0.015238281,0.0051540458,0.00013793785,0.46530637,0.0071805497,0.0004012968,0.2532933],"study_design_scores_gemma":[0.00260457,0.00015902385,0.9523278,0.000063458785,0.000049431528,0.00012374294,0.0002737926,0.00008230573,0.03147605,0.00029514282,0.012405467,0.00013924218],"about_ca_topic_score_codex":0.00015961942,"about_ca_topic_score_gemma":0.00024602134,"teacher_disagreement_score":0.7049116,"about_ca_system_score_codex":0.0003332781,"about_ca_system_score_gemma":0.00025440732,"threshold_uncertainty_score":0.45977673},"labels":[],"label_agreement":null},{"id":"W3167953946","doi":"10.1096/fasebj.2021.35.s1.00451","title":"FCGBP stabilizes colonic MUC2 mucin structural integrity in innate host defense against <i>Entamoeba histolytica</i>","year":2021,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Mucin; Mucus; Mucin 2; Innate immune system; Biology; Proteases; Cell biology; Chemistry; Molecular biology; Biochemistry; Gene expression; Enzyme; Receptor; Gene","score_opus":0.019249404706081136,"score_gpt":0.2770284326997899,"score_spread":0.2577790279937088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3167953946","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99307543,0.0009468111,0.000031205243,0.002190369,0.0005869373,0.00020529577,0.000020171754,0.000027812708,0.002915958],"genre_scores_gemma":[0.9974672,0.00031700273,0.00030847252,0.00088671246,0.00017153262,0.000007689111,0.000021331925,0.000022145898,0.0007978658],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984812,0.00022920805,0.0004093794,0.00020738816,0.00028891533,0.00038391913],"domain_scores_gemma":[0.99899167,0.0001353207,0.00014139584,0.0003344983,0.00021486469,0.00018226694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042242662,0.00019759024,0.00033672585,0.000118883574,0.0003361069,0.000060084323,0.00011050009,0.0000941379,0.00055180833],"category_scores_gemma":[0.0002626636,0.0001240684,0.00018515642,0.00036056433,0.00016965292,0.00011726714,0.00007374331,0.001154145,0.000057189147],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014538832,0.0016442193,0.8259937,0.000120422344,0.0011224949,0.011662432,0.0052943197,0.00014288184,0.13167633,0.002255115,0.0043910397,0.014243146],"study_design_scores_gemma":[0.02675377,0.0017312816,0.7743229,0.00112685,0.0013158759,0.035054523,0.009855411,0.0026113645,0.13195792,0.0043563335,0.009753073,0.0011606467],"about_ca_topic_score_codex":0.00014066679,"about_ca_topic_score_gemma":0.0004733404,"teacher_disagreement_score":0.05167076,"about_ca_system_score_codex":0.0006611076,"about_ca_system_score_gemma":0.0005395693,"threshold_uncertainty_score":0.6041914},"labels":[],"label_agreement":null},{"id":"W3169979944","doi":"10.1096/fasebj.2021.35.s1.02818","title":"<i>Entamoeba histolytica</i> ‐Induced Activation of Caspase‐4 Regulates Gasdermin D Cleavage to Mediate IL‐1β Secretion in Macrophages","year":2021,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Inflammasome; Secretion; Caspase 1; Cell biology; Pyroptosis; Entamoeba histolytica; Chemistry; Caspase; Effector; Biology; Programmed cell death; Biochemistry; Microbiology; Apoptosis; Receptor","score_opus":0.017284581293571123,"score_gpt":0.27044650139035037,"score_spread":0.25316192009677924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3169979944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99576527,0.00011167503,0.0002474665,0.002091746,0.00022372484,0.00019299563,0.00000781106,0.000012485381,0.001346811],"genre_scores_gemma":[0.99828106,0.00009816285,0.00033941676,0.0003322832,0.00016879759,0.000007491413,0.000020441936,0.000017241378,0.000735084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989228,0.00012623351,0.00033605282,0.00014203227,0.00026498616,0.00020786916],"domain_scores_gemma":[0.99925685,0.00009277458,0.00015369736,0.0002274931,0.00014292735,0.00012626316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032121694,0.00012188014,0.00023921323,0.0001537081,0.00013489943,0.000019111769,0.00005844332,0.00006431918,0.0002660514],"category_scores_gemma":[0.00016033556,0.00008511935,0.0000958671,0.00035455948,0.00004017108,0.00009538804,0.000033169577,0.00028469673,0.0000283151],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026050175,0.0003383182,0.011014748,0.000028725985,0.00011542587,0.0005755319,0.00097060873,0.000060807153,0.9774938,0.0001051273,0.0007431259,0.008293227],"study_design_scores_gemma":[0.0017104098,0.00028085237,0.06891165,0.00023392339,0.0001260632,0.0013890887,0.0007836981,0.00013060636,0.9258983,0.00027332484,0.00017540132,0.00008667154],"about_ca_topic_score_codex":0.00009179675,"about_ca_topic_score_gemma":0.000046194014,"teacher_disagreement_score":0.057896897,"about_ca_system_score_codex":0.00021820609,"about_ca_system_score_gemma":0.00017222973,"threshold_uncertainty_score":0.34710664},"labels":[],"label_agreement":null},{"id":"W3174429136","doi":"10.1096/fasebj.26.1_supplement.275.7","title":"<i>Entamoeba histolytica</i> induces a robust acute inflammatory response with increased colonic permeability and altered tight junction proteins in <i>Muc2</i> <sup>−/−</sup> mice","year":2012,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Tight junction; Occludin; Mucin 2; Mucin; Entamoeba histolytica; Claudin; Mucus; Goblet cell; Biology; Innate immune system; Secretion; Inflammation; Intestinal permeability; Colitis; Microbiology; Immunology; Cell biology; Immune system; Gene expression; Biochemistry; Epithelium; Gene","score_opus":0.013711404243423446,"score_gpt":0.23512725919782473,"score_spread":0.22141585495440128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174429136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99734914,0.00031117516,0.00008397738,0.0007698035,0.00011625673,0.00096419384,0.000009587021,0.000034941808,0.0003609162],"genre_scores_gemma":[0.9985084,0.000059218626,0.0004167045,0.00031772576,0.00026748286,0.00010666126,0.000008869482,0.0000276554,0.00028727483],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981339,0.00052675867,0.00036702486,0.00020492033,0.00032403317,0.00044336834],"domain_scores_gemma":[0.99889237,0.00017309994,0.0001983074,0.00030747382,0.00011301598,0.00031573809],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001481191,0.0002378864,0.0003160863,0.0001882031,0.0004217312,0.000047187863,0.00008650153,0.0001113342,0.00011723413],"category_scores_gemma":[0.00012030482,0.00014100714,0.00007873808,0.00025897284,0.0002684402,0.00037240866,0.000045334196,0.00068964734,0.000022673616],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.026948223,0.0020505253,0.86171013,0.000089561705,0.00092610635,0.00041959196,0.0057254313,0.00015118303,0.09930557,0.0000571535,0.0008744403,0.0017420617],"study_design_scores_gemma":[0.014081407,0.0024723574,0.93726254,0.00045855096,0.0012185605,0.016978793,0.0021856118,0.00073373155,0.021877935,0.00006972837,0.0022054154,0.00045537646],"about_ca_topic_score_codex":0.00016123267,"about_ca_topic_score_gemma":0.000054757955,"teacher_disagreement_score":0.07742763,"about_ca_system_score_codex":0.000581509,"about_ca_system_score_gemma":0.00039475723,"threshold_uncertainty_score":0.5750104},"labels":[],"label_agreement":null},{"id":"W3174486043","doi":"10.14740/gr1404","title":"Is the Use of Proton Pump Inhibitors a Predisposing Factor for Pyogenic Liver Abscesses?","year":2021,"lang":"en","type":"article","venue":"Gastroenterology Research","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"American College of Gastroenterology","keywords":"Pyogenic liver abscess; Medicine; Liver abscess; Internal medicine; Odds ratio; Gastroenterology; Abscess; Proton-pump inhibitor; Univariate analysis; Population; Liver disease; Surgery; Multivariate analysis","score_opus":0.2008851115375266,"score_gpt":0.40290381979499557,"score_spread":0.20201870825746895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174486043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99610317,0.000079332414,0.00040871446,0.001621525,0.00008778064,0.0015547534,0.00008370057,0.000014103388,0.0000468929],"genre_scores_gemma":[0.99750924,0.000074099,0.00053901074,0.0002346256,0.00010686456,0.00042172283,0.000021837548,0.000018932215,0.001073645],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985939,0.00019483526,0.0002179538,0.00026631335,0.00027704344,0.00044991527],"domain_scores_gemma":[0.9986279,0.00024253588,0.000054986358,0.00036753702,0.0006259615,0.00008108678],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002525393,0.000098124154,0.00021184498,0.00013142797,0.00019081078,0.00002342253,0.000073505435,0.00008456215,0.00025593385],"category_scores_gemma":[0.00027436574,0.00006486494,0.00015182965,0.00019606503,0.0002701606,0.00007546814,0.000118125434,0.00028620104,0.00001550928],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001147449,0.0006145358,0.985178,0.00023088967,0.00042073138,0.00007216855,0.0005442846,0.0000025212648,0.008693575,0.000019106381,0.0017603149,0.0013164125],"study_design_scores_gemma":[0.005861755,0.0047274767,0.86358094,0.0002933496,0.0002493982,0.0007583459,0.00032908047,0.0008646205,0.10908805,0.000093436414,0.014052094,0.00010145381],"about_ca_topic_score_codex":0.000077113276,"about_ca_topic_score_gemma":0.000064090884,"teacher_disagreement_score":0.121597074,"about_ca_system_score_codex":0.00007406559,"about_ca_system_score_gemma":0.00015399339,"threshold_uncertainty_score":0.28022963},"labels":[],"label_agreement":null},{"id":"W3177325799","doi":"10.1096/fasebj.26.1_supplement.276.5","title":"Inflammasome Activation Triggered by the Cysteine Proteases of <i>Entamoeba histolytica</i>","year":2012,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Inflammasome; Entamoeba histolytica; Caspase 1; Innate immune system; Cysteine protease; Proteases; Caspase; Cell biology; Biology; Cysteine; Microbiology; Chemistry; Inflammation; Immunology; Receptor; Biochemistry; Apoptosis; Programmed cell death; Enzyme","score_opus":0.016093420316409153,"score_gpt":0.2551298631320442,"score_spread":0.23903644281563508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3177325799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940512,0.00064895855,0.00037770372,0.0016060635,0.000180787,0.00041437836,0.000007462502,0.000013765511,0.0026996564],"genre_scores_gemma":[0.9970218,0.000044266864,0.000067016255,0.00018327308,0.00037837742,0.000018864817,0.000008596683,0.000011847149,0.0022659781],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914634,0.00009128657,0.00025433514,0.000052603395,0.00025473707,0.00020071602],"domain_scores_gemma":[0.99926853,0.00009911187,0.00023556332,0.00021168239,0.000086489585,0.00009861202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004068094,0.00009868549,0.00016315046,0.000046536075,0.0002709782,0.000012685276,0.0000772495,0.000036813282,0.00020182457],"category_scores_gemma":[0.00010319058,0.00004410025,0.00010979768,0.00013613001,0.00010557363,0.00014927238,0.000018741348,0.00024341831,0.000028999239],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011920091,0.002138715,0.10975857,0.00007506092,0.0013506864,0.000020953225,0.0023647586,0.000015409478,0.8251265,0.0010970664,0.029026257,0.027833961],"study_design_scores_gemma":[0.00779623,0.0013638316,0.040548515,0.00033180413,0.0014402759,0.0045316755,0.0013700868,0.00008273195,0.9038577,0.00036496227,0.03806432,0.00024784298],"about_ca_topic_score_codex":0.000048099777,"about_ca_topic_score_gemma":7.105396e-7,"teacher_disagreement_score":0.07873117,"about_ca_system_score_codex":0.00011158909,"about_ca_system_score_gemma":0.000072922245,"threshold_uncertainty_score":0.22098376},"labels":[],"label_agreement":null},{"id":"W3183903499","doi":"10.21423/aabppro20173383","title":"Retrospective study of retroperitoneal abscess in cattle","year":2017,"lang":"en","type":"article","venue":"American Association of Bovine Practitioners Conference Proceedings","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Laparotomy; Medicine; Abscess; Retrospective cohort study; Pathological; Surgery; Radiology; General surgery; Pathology","score_opus":0.017332597823768718,"score_gpt":0.3127776646492327,"score_spread":0.29544506682546395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3183903499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9680226,0.000002443336,0.000013664703,0.0012698707,0.00006032881,0.00039697808,0.000012265928,0.00001912184,0.030202728],"genre_scores_gemma":[0.99871737,0.00003811166,0.00026534352,0.000023419998,0.000037242928,0.00004760206,0.000007994502,0.000012031401,0.0008508645],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988294,0.00001708342,0.0003610883,0.00023517215,0.00039651562,0.0001606923],"domain_scores_gemma":[0.99688536,0.000024966415,0.0018465912,0.00017587873,0.0010143571,0.000052850435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030020572,0.00011765192,0.0004692515,0.00018293803,0.00014487545,0.000038799262,0.000101804224,0.00005179243,0.000087609944],"category_scores_gemma":[0.0011575703,0.00011293617,0.000053177173,0.00023445612,0.00015865707,0.0004512893,0.000047719535,0.00020746763,0.000006873172],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019166376,0.001245265,0.9940674,0.00002081723,0.0001530705,0.0000023944226,0.0018179216,5.739888e-7,0.0010974922,0.00051891466,0.00021685619,0.0006676731],"study_design_scores_gemma":[0.0020075752,0.0017215036,0.9868012,0.00006303973,0.000109721695,0.0000041316976,0.008311806,0.000075455086,0.000664437,0.00007798949,0.00007379453,0.00008936653],"about_ca_topic_score_codex":0.0055201594,"about_ca_topic_score_gemma":0.00041709488,"teacher_disagreement_score":0.03069479,"about_ca_system_score_codex":0.0004996135,"about_ca_system_score_gemma":0.00014231782,"threshold_uncertainty_score":0.83448666},"labels":[],"label_agreement":null},{"id":"W3194489746","doi":"10.1101/2021.08.14.455483","title":"NLRP1B and NLRP3 control the host response following colonization with the commensal protist <i>Tritrichomonas musculis</i>","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto","funders":"","keywords":"Biology; Colonisation resistance; Immune system; Salmonella; Microbiology; Colonization; Host (biology); Salmonella enterica; Extracellular; Commensalism; Immunology; Bacteria; Cell biology; Ecology; Genetics","score_opus":0.007137838268368172,"score_gpt":0.2155104082143395,"score_spread":0.20837256994597134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3194489746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9860911,0.0018656865,0.0025954274,0.0056143226,0.0004492755,0.0030748984,0.00009556544,0.00019511743,0.000018632865],"genre_scores_gemma":[0.99676657,0.000117290496,0.0006799127,0.0013414476,0.00023759226,0.000721857,0.000001506794,0.00011017687,0.000023675027],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976025,0.00049672055,0.0003489819,0.0006893896,0.00045378995,0.00040856903],"domain_scores_gemma":[0.99745184,0.00036955258,0.0003040514,0.0011553151,0.00053775805,0.00018145697],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009778606,0.00048274238,0.0005916853,0.0001259879,0.0007951205,0.00036414186,0.00020593211,0.00032250644,0.000018502018],"category_scores_gemma":[0.00037686256,0.00028730134,0.00017532414,0.00064503483,0.00024264678,0.000109531764,0.00022442294,0.0008583366,0.00000865324],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0059823,0.002416422,0.6101196,0.0010778031,0.007803964,0.0035444924,0.00050542643,0.00011961543,0.36506945,0.0005949637,0.0027400905,0.000025875217],"study_design_scores_gemma":[0.0064775613,0.0005292043,0.9640994,0.00082149456,0.0022829203,0.0000018171736,0.00006875847,0.00038875948,0.012108072,3.776812e-7,0.012586896,0.0006347048],"about_ca_topic_score_codex":0.00013960793,"about_ca_topic_score_gemma":0.000013791764,"teacher_disagreement_score":0.35397983,"about_ca_system_score_codex":0.00029481758,"about_ca_system_score_gemma":0.00076948,"threshold_uncertainty_score":0.9999579},"labels":[],"label_agreement":null},{"id":"W3196348587","doi":"10.1186/s12879-021-06649-9","title":"Epidemiology and risk factors for pyogenic liver abscess in the Calgary Health Zone revisited: a population-based study","year":2021,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Provincial Laboratory of Public Health; University of Calgary; Alberta Health Services; University of British Columbia","funders":"Alberta Precision Laboratories; Alberta Health Services","keywords":"Medicine; Pyogenic liver abscess; Epidemiology; Mortality rate; Population; Incidence (geometry); Bacteremia; Internal medicine; Liver abscess; Relative risk; Liver disease; Risk factor; Cirrhosis; Abscess; Surgery; Antibiotics; Environmental health; Confidence interval; Biology","score_opus":0.03896403153526161,"score_gpt":0.3460624391927322,"score_spread":0.3070984076574706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196348587","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99267495,0.0030138318,0.0024116826,0.00006545839,0.000083337414,0.0015608321,0.00008542971,0.000060809067,0.000043680102],"genre_scores_gemma":[0.99842626,0.00015855135,0.00014402988,0.00052894995,0.00007555158,0.00028036127,0.0003218999,0.000017930055,0.00004647695],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983298,0.0006477903,0.00033703737,0.000334069,0.000098265446,0.00025300685],"domain_scores_gemma":[0.9976749,0.0016662851,0.00015512017,0.0003002602,0.000079457146,0.00012400332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035438503,0.00016443322,0.00043244867,0.00012239061,0.0003260458,0.000011539385,0.000030351199,0.00005516383,0.00005299773],"category_scores_gemma":[0.0012584849,0.00011031581,0.00015083785,0.00026450228,0.000031086467,0.000041976975,0.000017824304,0.000118739605,0.0000040015548],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074872725,0.001739998,0.9962113,0.00014205543,0.00011946823,0.000029158591,0.00018369615,0.000105867184,1.4355258e-7,0.00010348904,0.00007006889,0.0012198923],"study_design_scores_gemma":[0.0030137755,0.00067192107,0.99434245,0.00004507068,0.000440042,0.000034753506,0.00033960099,0.0007728249,9.2619894e-7,0.00018104228,0.0000634649,0.00009413512],"about_ca_topic_score_codex":0.0068403757,"about_ca_topic_score_gemma":0.005185258,"teacher_disagreement_score":0.0057513104,"about_ca_system_score_codex":0.00015351703,"about_ca_system_score_gemma":0.00024959777,"threshold_uncertainty_score":0.99977314},"labels":[],"label_agreement":null},{"id":"W3196889616","doi":"10.1371/journal.ppat.1009936","title":"Entamoeba histolytica activation of caspase-1 degrades cullin that attenuates NF-κB dependent signaling from macrophages","year":2021,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Cullin; Cell biology; Biology; Ubiquitin ligase; Signal transduction; Proinflammatory cytokine; Chemistry; Ubiquitin; Inflammation; Biochemistry; Immunology","score_opus":0.03940374180362019,"score_gpt":0.2596832200765252,"score_spread":0.22027947827290503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196889616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99697655,0.0007470442,0.0007309808,0.0002737714,0.00010950828,0.00022393299,0.00018157282,0.000054006527,0.00070265133],"genre_scores_gemma":[0.9954356,0.00013035859,0.003261201,0.00010758664,0.00009989513,0.000030663665,0.000341487,0.000032065465,0.00056115614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988184,0.00006277036,0.00025810272,0.00032417377,0.00032163278,0.00021491614],"domain_scores_gemma":[0.9991073,0.00016272119,0.00013334143,0.00031426694,0.00017753537,0.0001048074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005434123,0.00018067432,0.00034166762,0.0000872733,0.00011430778,0.000016107522,0.000045439454,0.00010310354,0.000886598],"category_scores_gemma":[0.00011499165,0.00015748301,0.00014917519,0.00015874766,0.000049049646,0.0000702355,0.000040631592,0.00013679767,0.00006550806],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053384025,0.0008521044,0.16616437,0.00006122232,0.0004964576,0.00055288826,0.0005319415,0.000017342509,0.82951695,0.00003469431,0.00007935898,0.0016392773],"study_design_scores_gemma":[0.0010429306,0.0001083908,0.017331354,0.00023789983,0.00064612675,0.00004984884,0.00074627314,0.00020515615,0.97925156,0.00014600476,0.00010187765,0.00013256399],"about_ca_topic_score_codex":0.00020572644,"about_ca_topic_score_gemma":0.000031109805,"teacher_disagreement_score":0.14973462,"about_ca_system_score_codex":0.00017708166,"about_ca_system_score_gemma":0.00010852976,"threshold_uncertainty_score":0.97076267},"labels":[],"label_agreement":null},{"id":"W3200556642","doi":"10.3389/fcimb.2021.748404","title":"The NF-κB Pathway: Modulation by Entamoeba histolytica and Other Protozoan Parasites","year":2021,"lang":"en","type":"review","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Innate immune system; Entamoeba histolytica; Signal transduction; Cell biology; Immune system; Intracellular parasite; Protozoan infection; Transcription factor; Microbiology; Intracellular; Immunology; Gene; Genetics","score_opus":0.014692347811668512,"score_gpt":0.27498923373519285,"score_spread":0.26029688592352435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200556642","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00095762836,0.9945481,0.0015784801,0.00003082868,0.00081816316,0.0014879309,0.00005330324,0.000028603226,0.0004969564],"genre_scores_gemma":[0.0005477171,0.9962251,0.00026720352,0.000060336348,0.000093354,0.0002790663,0.00059542444,0.000039617462,0.001892157],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99854994,0.00026638643,0.00043184945,0.0004514448,0.000038085498,0.0002623014],"domain_scores_gemma":[0.9993951,0.00006523395,0.00019617954,0.00023872788,0.000039538052,0.00006524638],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002196381,0.0003212344,0.0009483361,0.0001848674,0.00024513915,0.00003615891,0.00003432674,0.00046147135,0.00003636481],"category_scores_gemma":[0.00003859088,0.00021626535,0.00017777983,0.00019505432,0.00024721908,0.000039313047,0.000045428606,0.00036695466,0.0000088195575],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024618668,0.0002895949,0.029014902,0.0018144753,0.0006706025,0.00002617261,0.000069993504,2.7711863e-7,0.00042872017,0.00015082242,0.010716491,0.9567933],"study_design_scores_gemma":[0.00060021784,0.00015875576,0.000038697242,0.00083841867,0.00036181233,0.00042651925,0.000015285561,0.000022424623,0.000112349444,0.000037900154,0.99719995,0.00018768176],"about_ca_topic_score_codex":0.00011100465,"about_ca_topic_score_gemma":0.000016942788,"teacher_disagreement_score":0.98648345,"about_ca_system_score_codex":0.0002389948,"about_ca_system_score_gemma":0.00010958878,"threshold_uncertainty_score":0.88190454},"labels":[],"label_agreement":null},{"id":"W3202663914","doi":"10.30683/1929-2279.2019.08.07","title":"Liver Abscesses in Cancer Patients Associated with Poor Prognosis: A Single Center Experience","year":2019,"lang":"en","type":"article","venue":"Journal of cancer research updates","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Liver abscess; Bacteremia; Cancer; Incidence (geometry); Surgery; Pancreatic cancer; Liver cancer; Antibiotics; Percutaneous; Stage (stratigraphy); Internal medicine; Abscess; Single Center; Gastroenterology","score_opus":0.04921696967689496,"score_gpt":0.3931770607731541,"score_spread":0.34396009109625914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202663914","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972342,0.0010384951,6.377052e-7,0.0005010976,0.00012979645,0.00040799702,0.000015351337,0.000006051219,0.0006663287],"genre_scores_gemma":[0.99830985,0.0008083298,0.00003180542,0.00009663105,0.000074912336,0.00008635419,0.0000056292124,0.000018083934,0.00056842226],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983556,0.00008234904,0.00027523233,0.00015236739,0.0007789272,0.0003555063],"domain_scores_gemma":[0.99840134,0.00007872626,0.00018002081,0.00008677798,0.0011270029,0.00012610038],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026261434,0.00010524071,0.00027162363,0.00031323824,0.000059279995,0.000041882027,0.00010283675,0.000053015054,0.00092636043],"category_scores_gemma":[0.00012064563,0.00006537846,0.00005234006,0.00051171763,0.0000944111,0.00031384965,0.0000367773,0.00036890936,0.000017065291],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055693625,0.0018718643,0.9925594,0.000041411724,0.00020156219,0.00008493358,0.0006602733,0.00000885541,0.00077258033,0.000002713502,0.00088413095,0.002355375],"study_design_scores_gemma":[0.007674156,0.00422261,0.9609027,0.0031251346,0.00006287939,0.000025987414,0.0006526953,0.000051205265,0.019900527,0.00001688325,0.00322353,0.00014169083],"about_ca_topic_score_codex":0.0009337111,"about_ca_topic_score_gemma":0.000832968,"teacher_disagreement_score":0.031656664,"about_ca_system_score_codex":0.0007203786,"about_ca_system_score_gemma":0.00037497896,"threshold_uncertainty_score":0.99998695},"labels":[],"label_agreement":null},{"id":"W3207681321","doi":"10.14740/jcs444","title":"Laparoscopic Treatment of Liver Abscess by a Fishbone Impaction: A Case Report","year":2021,"lang":"en","type":"article","venue":"Journal of Current Surgery","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Surgery; Liver abscess; Impaction; Abscess; Abdomen; Computed tomography; Sepsis; Radiology; General surgery","score_opus":0.05931210467978621,"score_gpt":0.3549685696316035,"score_spread":0.2956564649518173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3207681321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988148,0.009925015,0.00011928994,0.00017880085,0.0012487443,0.00007447252,0.00001770286,0.000006489515,0.0002815054],"genre_scores_gemma":[0.9961833,0.0025701975,0.00005778528,0.000013124424,0.00027490075,0.0000041922676,0.000025605417,0.000010211888,0.0008607129],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9988238,0.00004554366,0.0006413635,0.000107502005,0.0002440109,0.00013776043],"domain_scores_gemma":[0.99853283,0.00015059089,0.0005855888,0.00017079726,0.00040434505,0.00015587293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015557087,0.00012013362,0.000566449,0.00014624695,0.000049869403,0.00001064111,0.000011967949,0.00004562431,0.00042917707],"category_scores_gemma":[0.00011545219,0.00008587313,0.00039033234,0.00020586218,0.000031349813,0.00011000651,0.0000071025484,0.000099505975,0.0000057636835],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003973487,0.008890046,0.445541,0.0002914503,0.001540209,0.43284807,0.00033525334,0.0000046985256,0.0015064619,0.000007758881,0.0540143,0.054623388],"study_design_scores_gemma":[0.0040395376,0.00087797537,0.045787796,0.00084181834,0.0014256422,0.8337054,0.00018573835,0.000019428007,0.031697683,0.00002362582,0.08120814,0.00018722037],"about_ca_topic_score_codex":0.00006145145,"about_ca_topic_score_gemma":0.000008895155,"teacher_disagreement_score":0.40085733,"about_ca_system_score_codex":0.00020605278,"about_ca_system_score_gemma":0.000497294,"threshold_uncertainty_score":0.4699188},"labels":[],"label_agreement":null},{"id":"W346590335","doi":"10.1007/978-4-431-55200-0_27","title":"The Effect of Entamoeba histolytica on Muc2 Mucin and Intestinal Permeability","year":2014,"lang":"en","type":"book-chapter","venue":"","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Entamoeba histolytica; Virulence; Mucin; Microbiology; Mucus; Biology; Secretion; Intestinal mucosa; Tight junction; Mucin 2; Cell biology; Medicine; Gene expression; Biochemistry","score_opus":0.0080282204174185,"score_gpt":0.24630412235330915,"score_spread":0.23827590193589065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W346590335","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019622106,0.00013705852,0.000050769937,0.0001893998,0.00016034787,0.0006495414,0.000006040787,0.00003978184,0.97914493],"genre_scores_gemma":[0.5467426,0.000038435468,0.00005157061,0.0000519525,0.000076576616,0.000013758799,0.000013378725,0.000024071796,0.4529876],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99915576,0.000027447639,0.00024126466,0.00026323728,0.00018454749,0.00012773159],"domain_scores_gemma":[0.9985282,0.00076381606,0.00011019225,0.00044695748,0.0000650044,0.00008584541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023088833,0.00024566444,0.0004395199,0.00006216354,0.000110682064,0.0000067759165,0.000042116804,0.0001420951,0.0005536209],"category_scores_gemma":[0.00018710957,0.00012356587,0.00015502762,0.00001102442,0.00033792708,0.0000073538354,0.00004016892,0.0002650827,0.00008353814],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030628738,0.00031255593,0.07086857,0.0014270705,0.0017210898,0.00013485883,0.00014143794,7.790904e-7,0.00014740016,0.42784753,0.012923478,0.48141235],"study_design_scores_gemma":[0.011947807,0.048414245,0.038476765,0.0029713584,0.004966065,0.0014285479,0.000029244571,0.00034871604,0.0033955695,0.008567198,0.87835735,0.0010971082],"about_ca_topic_score_codex":0.00007243364,"about_ca_topic_score_gemma":0.000027303817,"teacher_disagreement_score":0.8654339,"about_ca_system_score_codex":0.00014478154,"about_ca_system_score_gemma":0.000036862068,"threshold_uncertainty_score":0.6061761},"labels":[],"label_agreement":null},{"id":"W39386867","doi":"10.1186/cc11798","title":"A microbiome approach to sepsis: development and case-study application of novel methods for detection and isolation of microbes from whole blood","year":2012,"lang":"en","type":"article","venue":"Critical Care","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; Population Health Research Institute; University of Calgary","funders":"","keywords":"Medicine; Microbiome; Isolation (microbiology); Sepsis; Intensive care medicine; Blood culture; Computational biology; Data science; Bioinformatics; Microbiology; Immunology; Antibiotics; Biology; Computer science","score_opus":0.04415592988454324,"score_gpt":0.3806741549734979,"score_spread":0.3365182250889546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W39386867","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65059614,0.00033575916,0.34846058,0.000011815988,0.000018315903,0.0005152946,0.00002693248,0.0000063342814,0.000028788638],"genre_scores_gemma":[0.7164458,2.7668247e-7,0.28336444,0.000011031192,0.000019459645,0.00012834687,0.0000217965,0.0000062869776,0.000002532084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995368,0.000020109801,0.00016906949,0.00014486544,0.000035767334,0.00009336257],"domain_scores_gemma":[0.9995569,0.00009191231,0.000025152556,0.00009003876,0.00016454054,0.00007147665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010596075,0.00007275432,0.00016512138,0.00006936799,0.00006807715,0.000004699391,0.000010062907,0.000055036555,8.248036e-7],"category_scores_gemma":[0.00006554001,0.00006358128,0.000021359205,0.00008375157,0.00003545529,0.000041402716,0.00002188828,0.000030970266,2.5861885e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009553522,0.0027698393,0.06606786,0.0007415761,0.00020830268,0.0000013551153,0.015592611,8.2060546e-7,0.8430905,0.00012518968,0.000002071171,0.07130436],"study_design_scores_gemma":[0.0074386043,0.001757673,0.13780008,0.00012917179,0.0029924025,0.00083425094,0.06688105,0.0012735918,0.77959347,0.000050546354,0.0008952668,0.00035389853],"about_ca_topic_score_codex":0.00017408267,"about_ca_topic_score_gemma":0.000014708153,"teacher_disagreement_score":0.071732216,"about_ca_system_score_codex":0.000027049093,"about_ca_system_score_gemma":0.000012640465,"threshold_uncertainty_score":0.25927696},"labels":[],"label_agreement":null},{"id":"W4213339686","doi":"10.1093/jcag/gwab049.062","title":"A63 THE COLONIC PATHOGEN, <i>ENTAMOEBA HISTOLYTICA</i> ACTIVATES CASPASE-4 IN HUMAN MACROPHAGES THAT CLEAVES GASDERMIN D TO FACILITATE IL-1β SECRETION IN THE ABSENCE OF CELL DEATH","year":2022,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Pyroptosis; Inflammasome; Caspase 1; Secretion; Cell biology; Entamoeba histolytica; Biology; HEK 293 cells; Caspase; Chemistry; Molecular biology; Programmed cell death; Cell culture; Inflammation; Microbiology; Biochemistry; Apoptosis; Immunology","score_opus":0.019384429874108794,"score_gpt":0.24108573397437852,"score_spread":0.22170130410026972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213339686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98844355,0.000023189124,0.000007646231,0.010675209,0.00018729932,0.0003330487,0.00012481221,0.0000013178698,0.00020393846],"genre_scores_gemma":[0.99810034,0.000015477897,0.000035981033,0.0014233917,0.000023639244,0.00001833589,0.000006989987,0.000008037782,0.00036780615],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981328,0.0007339331,0.00044497135,0.00010225849,0.00030654672,0.00027947864],"domain_scores_gemma":[0.9987453,0.00016151181,0.0007155878,0.00018814369,0.00011058928,0.00007884738],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001275059,0.000101746424,0.00029883315,0.00027159837,0.00021135448,0.000008097226,0.00025384157,0.000049512684,0.0000622527],"category_scores_gemma":[0.00013221527,0.00006377229,0.00014829973,0.00021771561,0.000059634276,0.000044719414,0.00004374391,0.0004290062,0.000001014583],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024033012,0.00019484498,0.9870725,0.000013171843,0.000076585195,0.00008260123,0.0022580016,0.00046515436,0.0076977704,0.000043670476,0.0018079918,0.000047353962],"study_design_scores_gemma":[0.0018084545,0.0015781303,0.99236345,0.000035012457,0.00008463911,0.00021370353,0.0019185968,0.00003714386,0.0006942216,0.00014429717,0.0010840374,0.000038290284],"about_ca_topic_score_codex":0.015890053,"about_ca_topic_score_gemma":0.24022292,"teacher_disagreement_score":0.22433285,"about_ca_system_score_codex":0.002119223,"about_ca_system_score_gemma":0.00026007736,"threshold_uncertainty_score":0.99066323},"labels":[],"label_agreement":null},{"id":"W4214716682","doi":"10.1016/j.clinimag.2007.06.011","title":"Portal and hepatic vein thrombosis to liver abscess: CT findings","year":2007,"lang":"en","type":"article","venue":"Clinical Imaging","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"","keywords":"Medicine; Portal vein thrombosis; Liver abscess; Radiology; Portal vein; Hepatic abscess; Thrombosis; Abscess; Vein; Surgery","score_opus":0.04539759394852149,"score_gpt":0.41047967319678674,"score_spread":0.36508207924826525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214716682","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873539,0.00010446874,0.00092951884,0.0005901727,0.00023174786,0.00017870616,0.0000016467335,0.000050522645,0.010559315],"genre_scores_gemma":[0.99568015,0.000051327763,0.0019699717,0.0016348908,0.00015491512,0.000003975947,0.000005342801,0.00001437879,0.0004850575],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99909294,0.000013627682,0.0003326656,0.00023952224,0.00010626261,0.0002150121],"domain_scores_gemma":[0.99929327,0.00024006724,0.00003919829,0.00015823933,0.000044269218,0.00022495279],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004735742,0.00009603826,0.00023113034,0.00007437474,0.00008632954,0.00001994137,0.000029716206,0.000025421286,0.00021228379],"category_scores_gemma":[0.00030633324,0.00007749152,0.00008305075,0.00012281915,0.00009684657,0.00007619828,0.00004924318,0.00015983562,0.0001858558],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017719138,0.0002054162,0.9701633,0.000014125688,0.000054186436,0.00036290992,0.000074327945,8.725945e-8,0.00005970161,0.000057692367,0.0011467392,0.027843779],"study_design_scores_gemma":[0.0009150617,0.00013175335,0.9953092,0.00009578678,0.00014568376,0.00013533086,0.000093803166,0.00017617042,0.00017635549,0.000061854815,0.0026704567,0.000088564404],"about_ca_topic_score_codex":0.000119623925,"about_ca_topic_score_gemma":0.000017763014,"teacher_disagreement_score":0.027755214,"about_ca_system_score_codex":0.00002816461,"about_ca_system_score_gemma":0.000024003679,"threshold_uncertainty_score":0.31600124},"labels":[],"label_agreement":null},{"id":"W4220666893","doi":"10.4049/jimmunol.2100802","title":"NLRP1B and NLRP3 Control the Host Response following Colonization with the Commensal Protist <i>Tritrichomonas musculis</i>","year":2022,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto","funders":"Institute of Infection and Immunity; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Biology; Salmonella; Microbiology; Immune system; Extracellular; Colonisation resistance; Host (biology); Salmonella enterica; Colonization; Commensalism; Microbiome; Immunology; Bacteria; Cell biology; Ecology; Genetics","score_opus":0.00546872798019312,"score_gpt":0.22997276644922857,"score_spread":0.22450403846903544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220666893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9603765,0.002602778,0.00058318704,0.035476185,0.00020491137,0.0005873697,0.0000052887217,0.000008616625,0.00015516648],"genre_scores_gemma":[0.9980009,0.00009232767,0.00002756526,0.0014857856,0.000051616586,0.00002924281,0.0000016214642,0.000013261009,0.00029766254],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99840087,0.00098872,0.00020840803,0.00005905455,0.00019653473,0.00014641735],"domain_scores_gemma":[0.9986084,0.0007777402,0.00026911512,0.00021305846,0.0001097349,0.00002191509],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014981035,0.00009377072,0.00020824025,0.000065177315,0.0010919793,0.000016711807,0.00015050487,0.00002916667,0.000039287173],"category_scores_gemma":[0.00013243828,0.000036989564,0.00006950812,0.00024477765,0.00021325353,0.00004741383,0.00006691637,0.00052969495,0.000001925454],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.30296278,0.0055862647,0.30977646,0.00007293176,0.02838845,0.00393449,0.04984218,0.001501654,0.23670402,0.0031184233,0.032214887,0.025897462],"study_design_scores_gemma":[0.032221608,0.019158749,0.7677256,0.00008188464,0.0035918697,0.03849669,0.0136073455,0.00023613563,0.0009583368,0.00017141904,0.123496026,0.00025433963],"about_ca_topic_score_codex":0.00006055009,"about_ca_topic_score_gemma":0.000008439242,"teacher_disagreement_score":0.45794913,"about_ca_system_score_codex":0.00010974446,"about_ca_system_score_gemma":0.00012851304,"threshold_uncertainty_score":0.8398732},"labels":[],"label_agreement":null},{"id":"W4220928794","doi":"10.1371/journal.ppat.1010415","title":"The colonic pathogen Entamoeba histolytica activates caspase-4/1 that cleaves the pore-forming protein gasdermin D to regulate IL-1β secretion","year":2022,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Entamoeba histolytica; Secretion; Pathogen; Microbiology; Cell biology; Chemistry; Biology; Biochemistry","score_opus":0.021728543131523722,"score_gpt":0.2422679805531906,"score_spread":0.22053943742166687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220928794","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99035364,0.00021324606,0.000078267585,0.0045420304,0.0002092052,0.0024126389,0.00017705215,0.00012933959,0.0018845671],"genre_scores_gemma":[0.9927811,0.00003099276,0.00029485745,0.00047784287,0.00014412904,0.0014163827,0.00011210188,0.000063326836,0.004679278],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99797684,0.00024285147,0.00030530329,0.00042252569,0.00050585286,0.00054663303],"domain_scores_gemma":[0.99863154,0.00018390203,0.00018014456,0.0007392505,0.000088754925,0.00017639181],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0004746139,0.0002708727,0.00028547255,0.000112065274,0.002142994,0.000052824424,0.00021256723,0.00006864315,0.0002746294],"category_scores_gemma":[0.00015853118,0.00016532972,0.00019778093,0.00039202464,0.00010274395,0.00007764907,0.00026291638,0.00037864968,0.000074660464],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001517508,0.0018274223,0.014572779,0.00013511545,0.0011784016,0.0019958692,0.0069521056,0.00014609423,0.9263914,0.0033857743,0.0033979462,0.03849954],"study_design_scores_gemma":[0.008845365,0.009753071,0.09845399,0.00074477243,0.004096927,0.0059182215,0.028446333,0.007621168,0.40138027,0.005133546,0.42696476,0.002641584],"about_ca_topic_score_codex":0.00008595175,"about_ca_topic_score_gemma":0.000056367408,"teacher_disagreement_score":0.5250112,"about_ca_system_score_codex":0.00067921623,"about_ca_system_score_gemma":0.0001924848,"threshold_uncertainty_score":0.99915606},"labels":[],"label_agreement":null},{"id":"W4225313464","doi":"10.1096/fasebj.2022.36.s1.0r878","title":"Colonic Goblet Cells Produce Augmented Levels of Pro‐inflammatory Cytokines due to Metabolically Stressful MUC2 Mucin Biosynthesis","year":2022,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Mucin; Mucus; Goblet cell; Mucin 2; Innate immune system; Cell biology; Biology; Chemokine; Proinflammatory cytokine; Immunology; Microbiology; Inflammation; Immune system; Epithelium; Gene expression; Biochemistry","score_opus":0.019285523311252807,"score_gpt":0.258662948179471,"score_spread":0.2393774248682182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225313464","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995083,0.00019852418,0.00012758892,0.0026435056,0.00037197495,0.00073111703,0.00015625119,0.00003229169,0.00065579783],"genre_scores_gemma":[0.9966693,0.000020691421,0.0004842927,0.00030352277,0.00022316244,0.00007978,0.000004572623,0.000029770737,0.002184904],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982324,0.00026723917,0.00045111694,0.00021084747,0.00051858654,0.00031981448],"domain_scores_gemma":[0.9988418,0.000102605176,0.00027571895,0.00040910413,0.00019247139,0.00017826763],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007824598,0.00018393518,0.00039048507,0.00022017921,0.0005592598,0.000022485405,0.0002198051,0.00003672018,0.0027189169],"category_scores_gemma":[0.00011299063,0.000118049706,0.00018191998,0.00040781262,0.00008154214,0.000058900714,0.0001465258,0.00041085022,0.000044680975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012300436,0.0016602452,0.013253314,0.0000983355,0.0016949164,0.0007620732,0.0016278813,0.0010355199,0.9581778,0.00033504318,0.0073364824,0.012788358],"study_design_scores_gemma":[0.0025609934,0.0013045247,0.07140864,0.000115529125,0.0008332952,0.002532152,0.0008472544,0.000102481914,0.9082585,0.00016724084,0.0116403755,0.00022902472],"about_ca_topic_score_codex":0.00004665322,"about_ca_topic_score_gemma":0.000013592854,"teacher_disagreement_score":0.058155324,"about_ca_system_score_codex":0.00019637798,"about_ca_system_score_gemma":0.00034758213,"threshold_uncertainty_score":0.9981927},"labels":[],"label_agreement":null},{"id":"W4230387229","doi":"10.1002/1521-4141(200002)30:2<423::aid-immu423>3.3.co;2-s","title":"A subunit vaccine candidate region of the Entamoeba histolytica galactose-adherence lectin promotes interleukin-12 gene transcription and protein production in human macrophages","year":2000,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Medical Research Council Canada; McGill University","keywords":"Entamoeba histolytica; Biology; Lectin; Molecular biology; Protein subunit; Mannan-binding lectin; Immune system; C-type lectin; Microbiology; Gene; Biochemistry; Immunology","score_opus":0.014111600174930404,"score_gpt":0.23266506698255648,"score_spread":0.21855346680762608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230387229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971813,0.00083381217,0.000027480934,0.00063761004,0.00015729824,0.0003562203,6.246373e-7,0.000008370446,0.00079728186],"genre_scores_gemma":[0.99734294,0.0002642449,0.00011246041,0.000016991058,0.000060075123,0.0000032867367,0.0000019716224,0.00001821588,0.0021798022],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987348,0.00041505817,0.00048068186,0.00013741068,0.000089738074,0.00014234432],"domain_scores_gemma":[0.99938315,0.000007542919,0.00029459546,0.0001887192,0.00009550509,0.000030506571],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003133403,0.00012152116,0.00025600573,0.00017721773,0.00008741998,0.00000768915,0.000087470944,0.00003147228,0.00012154852],"category_scores_gemma":[0.000052297935,0.00008100666,0.000069956375,0.0001595856,0.00011661582,0.00009695371,0.000016099975,0.00033614607,0.000004087828],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012148165,0.0005423109,0.018640988,0.00004903938,0.00018728942,0.000372918,0.0016091333,0.0000034646057,0.9322411,0.000013328061,0.000068315836,0.045057293],"study_design_scores_gemma":[0.005609765,0.0052877776,0.6379416,0.0008262056,0.00020755251,0.007305356,0.00017631073,0.0000054359757,0.3409129,0.000084083236,0.0015096993,0.0001333449],"about_ca_topic_score_codex":0.00010564489,"about_ca_topic_score_gemma":0.00004413087,"teacher_disagreement_score":0.6193006,"about_ca_system_score_codex":0.00010733899,"about_ca_system_score_gemma":0.000045767683,"threshold_uncertainty_score":0.3303356},"labels":[],"label_agreement":null},{"id":"W4232393176","doi":"10.1503/cmaj.121576","title":"Entamoeba histolytica","year":2013,"lang":"en","type":"review","venue":"Canadian Medical Association Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; University Health Network","funders":"","keywords":"Entamoeba histolytica; Amoebiasis; Dysentery; Medicine; Asymptomatic; Fulminant; Amoebic liver abscess; Pregnancy; Liver abscess; Immunology; Abscess; Pathology; Surgery; Biology","score_opus":0.02082422627590218,"score_gpt":0.3061311113804112,"score_spread":0.285306885104509,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232393176","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000046277128,0.96209985,0.000010879809,0.002115612,0.0015367067,0.00042465812,0.00002957077,0.000023786553,0.03375433],"genre_scores_gemma":[0.000007807187,0.98109865,0.00009465901,0.0019059223,0.0025012728,0.000045656114,0.00008122543,0.000046174307,0.014218642],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99712896,0.00016588539,0.00074251794,0.0002074993,0.0011775692,0.0005775467],"domain_scores_gemma":[0.9958258,0.00016072909,0.00045244527,0.0001790826,0.0003499995,0.0030319437],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0006424368,0.0002859683,0.0012116705,0.00046048374,0.00028740845,0.00008313973,0.0001489211,0.0011743435,0.036776964],"category_scores_gemma":[0.0011133808,0.00020857598,0.00063942414,0.00028938055,0.000037075613,0.0000701785,0.000015076918,0.001985371,0.0059707724],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[3.1725068e-7,0.000033507557,0.00022370592,0.00030994808,0.0005312382,0.00080484786,0.0000092582595,3.5636838e-9,1.4879199e-9,0.00006203908,0.20921667,0.78880847],"study_design_scores_gemma":[0.00043273388,0.000058074114,0.000052794276,0.00329856,0.0010688246,0.0061556217,0.000013434472,0.0000025786999,1.21138015e-8,0.000021411719,0.9887363,0.00015968435],"about_ca_topic_score_codex":0.002103631,"about_ca_topic_score_gemma":0.0020299566,"teacher_disagreement_score":0.7886488,"about_ca_system_score_codex":0.007056617,"about_ca_system_score_gemma":0.013343095,"threshold_uncertainty_score":0.9967551},"labels":[],"label_agreement":null},{"id":"W4238997591","doi":"10.5489/cuaj.2666","title":"Name correction","year":2015,"lang":"en","type":"erratum","venue":"Canadian Urological Association Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Computer science","score_opus":0.014021708426854086,"score_gpt":0.2443887217433269,"score_spread":0.23036701331647283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238997591","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017791552,0.0018392545,0.000054612003,0.019121949,0.10520457,0.00043571313,0.00012365136,0.00011052782,0.87133056],"genre_scores_gemma":[0.045148775,0.00050671306,0.00007342571,0.0040708967,0.009607615,0.00001810218,0.0007451979,0.000046752422,0.9397825],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99821657,0.00014173813,0.00035609206,0.0002279031,0.0005231775,0.0005345056],"domain_scores_gemma":[0.9973246,0.00005074086,0.00043348837,0.00013741928,0.00082132645,0.0012324342],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.0005756748,0.00023367596,0.00046546708,0.00035685435,0.00036256778,0.000107300155,0.00008019774,0.001304436,0.0024878238],"category_scores_gemma":[0.0014090118,0.00018558011,0.00025546382,0.0002169897,0.00002555412,0.00007061804,0.000011985518,0.0025246534,0.0009233053],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015167541,0.000046692065,0.06259366,0.0000027922365,0.00025720778,0.00025207447,0.000023588367,0.0000037547272,1.2708662e-7,0.000010411656,0.9334285,0.003365973],"study_design_scores_gemma":[0.0006425846,0.00044796802,0.07486661,0.000033914104,0.00029619885,0.0014108048,0.000023051443,0.00012656976,1.9557396e-7,0.0003604006,0.9216447,0.00014701214],"about_ca_topic_score_codex":0.0030032736,"about_ca_topic_score_gemma":0.001518726,"teacher_disagreement_score":0.09559695,"about_ca_system_score_codex":0.0073124073,"about_ca_system_score_gemma":0.003601854,"threshold_uncertainty_score":0.9999921},"labels":[],"label_agreement":null},{"id":"W4241158011","doi":"10.1016/j.pt.2021.01.001","title":"Entamoeba histolytica","year":2021,"lang":"en","type":"article","venue":"Trends in Parasitology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Cumming School of Medicine, University of Calgary","keywords":"Entamoeba histolytica; Biology; Lamina propria; Immune system; Parasite hosting; Virulence; Microbiology; Pathogenesis; Immunology; Asymptomatic; Intestinal mucosa; Amoebiasis; Pathology; Medicine; Epithelium; Gene","score_opus":0.023754297614731436,"score_gpt":0.3786895008917779,"score_spread":0.3549352032770465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241158011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7258238,0.00034994044,0.00006716367,0.0016827123,0.0004769212,0.000035008983,0.000002509361,0.000052020085,0.2715099],"genre_scores_gemma":[0.9833673,0.000022887161,0.0008266307,0.00028608815,0.000059641723,0.000015930738,0.000055940047,0.0000084848625,0.01535708],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99935466,0.000033413806,0.00014940066,0.00020348457,0.000061701765,0.00019735524],"domain_scores_gemma":[0.9996325,0.000033692337,0.000022528917,0.00022543779,0.000027916334,0.000057935562],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000028153667,0.00008331054,0.00022590563,0.00018898374,0.000031881944,0.0000027256356,0.000023119026,0.00009189908,0.0028997234],"category_scores_gemma":[0.00002463487,0.00007563962,0.00006406843,0.0003475728,0.00006359154,0.000019647297,0.000018112372,0.00012503681,0.00022154694],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048552654,0.0005549127,0.9625779,0.000006825808,0.00008506097,0.0031913638,0.0000845475,0.0000019354661,0.00019910945,0.0039936127,0.002941892,0.026314318],"study_design_scores_gemma":[0.0022698177,0.0001630656,0.9686148,0.000018299848,0.000117277465,0.0026839345,0.0000478681,0.00005149246,0.0015413514,0.00044172382,0.023959437,0.00009094452],"about_ca_topic_score_codex":0.000050724753,"about_ca_topic_score_gemma":0.00019114546,"teacher_disagreement_score":0.25754347,"about_ca_system_score_codex":0.00010986711,"about_ca_system_score_gemma":0.000054784,"threshold_uncertainty_score":0.99801177},"labels":[],"label_agreement":null},{"id":"W4244608616","doi":"10.1503/cmaj.061139","title":"Corrections","year":2006,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Computer science; World Wide Web; Data science; Information retrieval","score_opus":0.0038579000818776384,"score_gpt":0.22664855018532715,"score_spread":0.2227906501034495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244608616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5129373,0.00019419954,0.0007056461,0.04322631,0.0032732957,0.00018930108,0.000020272648,0.00007250419,0.43938115],"genre_scores_gemma":[0.9772905,0.00002420595,0.00014774327,0.0037719812,0.0022826663,0.0000049781715,0.000016134536,0.0000099629815,0.0164518],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.998896,0.00003232605,0.00019735422,0.0000690646,0.0005477724,0.00025745793],"domain_scores_gemma":[0.998819,0.000040225572,0.00006872975,0.000052021227,0.00025095308,0.0007690795],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032187568,0.000059171012,0.00010988336,0.00015427428,0.00031641097,0.00003274983,0.000030288455,0.00019015219,0.007852695],"category_scores_gemma":[0.00033445773,0.000050289716,0.00008444824,0.00018760453,0.000016484606,0.000049072936,0.0000026862238,0.00044924094,0.0005834677],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000025333018,0.000068122594,0.6507905,0.0000012949388,0.00007551705,0.00051044056,0.000014058131,0.000002624219,0.0000033792485,0.00047090673,0.33572307,0.012337526],"study_design_scores_gemma":[0.00095796667,0.000054860568,0.35940745,0.000023502596,0.000049066482,0.0017703164,0.00005528381,0.000100041136,0.000009911779,0.00037594995,0.63713706,0.000058565765],"about_ca_topic_score_codex":0.009424756,"about_ca_topic_score_gemma":0.030374963,"teacher_disagreement_score":0.4643532,"about_ca_system_score_codex":0.001230022,"about_ca_system_score_gemma":0.0018291805,"threshold_uncertainty_score":0.9971716},"labels":[],"label_agreement":null},{"id":"W4248340280","doi":"10.14740/jmc2238w","title":"Pyogenic Liver Abscess Mimicking Liver Neoplasm on Computed Tomography Scan in a Patient With Elevated CA 19-9","year":2015,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Leukocytosis; Liver abscess; Metastasis; Computed tomography; Pyogenic liver abscess; Radiology; Abscess; Presentation (obstetrics); Lesion; Tumor marker; Cancer; Hepatic abscess; Pathology; Internal medicine; Surgery","score_opus":0.02955633341962121,"score_gpt":0.2818952835785707,"score_spread":0.25233895015894947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248340280","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977319,0.00084786594,0.00011070612,0.00051152654,0.0002202399,0.00015582779,0.000004427456,0.000012523568,0.00040496464],"genre_scores_gemma":[0.99858916,0.000113057846,0.00037929075,0.0006993812,0.00017081061,0.0000035558205,0.000007095938,0.000014225364,0.000023397824],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980773,0.000083110106,0.00039491666,0.0001296524,0.001100724,0.0002143429],"domain_scores_gemma":[0.998605,0.00018858562,0.00022287267,0.000115701805,0.00026189917,0.00060594064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002742763,0.00014526428,0.0003525996,0.00039525284,0.00004617742,0.000015035282,0.00007617809,0.00011531795,0.00024185858],"category_scores_gemma":[0.0003209114,0.00008872802,0.000108277774,0.0004029128,0.00009651534,0.000070597,0.000025425048,0.00043931016,0.000014415758],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007176729,0.008617243,0.4651856,0.00022018948,0.0015945736,0.40752563,0.0032949783,0.0005894286,0.00005485634,0.000095206124,0.03158638,0.074059196],"study_design_scores_gemma":[0.07391423,0.053559415,0.4327069,0.01268016,0.002088031,0.37167603,0.005760487,0.012904733,0.002633049,0.00011885394,0.030700365,0.0012577487],"about_ca_topic_score_codex":0.0009836914,"about_ca_topic_score_gemma":0.0004251196,"teacher_disagreement_score":0.07280145,"about_ca_system_score_codex":0.00021755416,"about_ca_system_score_gemma":0.0005537101,"threshold_uncertainty_score":0.36182237},"labels":[],"label_agreement":null},{"id":"W4249519500","doi":"10.14740/jmc2326w","title":"Unusual Presentation of Streptococcus anginosus With Severe Sepsis, Liver Abscess Secondary to Biliary Tract Perforation","year":2015,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Streptococcus anginosus; Medicine; Liver abscess; Perforation; Bacteremia; Sepsis; Abscess; Gastroenterology; Biliary tract; Internal medicine; Surgery; Microbiology; Streptococcus; Antibiotics; Bacteria","score_opus":0.036401859070472005,"score_gpt":0.33656170362737364,"score_spread":0.30015984455690164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249519500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966292,0.00031407192,0.0005467209,0.0009756286,0.00017797605,0.00022417655,0.000013064353,0.000007831478,0.0011113341],"genre_scores_gemma":[0.9987649,0.00004342022,0.000514651,0.00016953448,0.00032909168,0.000005037672,0.000014807393,0.000009710043,0.00014887734],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99837327,0.000056591336,0.00036518014,0.00009280667,0.0009974517,0.00011468906],"domain_scores_gemma":[0.9986506,0.0001370817,0.00022634967,0.00009839087,0.00045998383,0.0004276123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003775962,0.00009795307,0.00026662528,0.00018029966,0.000033792167,0.000010573509,0.00005700248,0.00009396783,0.0006146267],"category_scores_gemma":[0.00044031165,0.000060403327,0.00007599764,0.00019054016,0.000059924158,0.00020225038,0.000016843836,0.00023937228,0.000008184151],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004960067,0.0049328245,0.7566779,0.0005197189,0.0010108136,0.018974727,0.0037038985,0.0006708795,0.00025302422,0.000095660056,0.053891525,0.15430894],"study_design_scores_gemma":[0.022565987,0.025339415,0.8736412,0.0019229492,0.0015483543,0.04775503,0.009712383,0.0011959246,0.008156346,0.00009460336,0.0076549654,0.00041286138],"about_ca_topic_score_codex":0.00015250531,"about_ca_topic_score_gemma":0.00004517987,"teacher_disagreement_score":0.15389608,"about_ca_system_score_codex":0.00009686343,"about_ca_system_score_gemma":0.000884766,"threshold_uncertainty_score":0.67297316},"labels":[],"label_agreement":null},{"id":"W4249715358","doi":"10.1007/978-3-662-48986-4_310627","title":"Bestimmung der akkuraten (exakten) Masse","year":2019,"lang":"de","type":"book-chapter","venue":"Springer Reference Medizin","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chemistry","score_opus":0.04741830143386314,"score_gpt":0.283536008199063,"score_spread":0.23611770676519986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249715358","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.024449069,0.024404246,0.0002858924,0.0010581318,0.0077046906,0.0027451387,0.0002523431,0.00039616687,0.9387043],"genre_scores_gemma":[0.42111686,0.007943651,0.0010954395,0.00048888486,0.0015110332,0.00009222665,0.00075995276,0.00036256868,0.5666294],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9950654,0.000078269666,0.0011482951,0.001458774,0.0010866807,0.0011626111],"domain_scores_gemma":[0.9960686,0.00022157426,0.00063909707,0.0019825345,0.0004964417,0.0005917839],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","insufficient_payload"],"category_scores_codex":[0.0004423838,0.0013583972,0.0016890567,0.0006120241,0.00034871485,0.00011688648,0.00049992173,0.0013304469,0.013786417],"category_scores_gemma":[0.0001562256,0.0011297984,0.00048270193,0.0001530291,0.0004079534,0.0002329899,0.00044210485,0.00218471,0.072371036],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002793844,0.0036489686,0.20123282,0.005040058,0.035220265,0.011178334,0.0028209144,0.00006772218,0.0047715013,0.43746296,0.011619547,0.28414306],"study_design_scores_gemma":[0.0052321684,0.002069719,0.021482715,0.006159141,0.0070242854,0.00021262911,0.00015086753,0.00017921186,0.0009433233,0.001560965,0.9527022,0.0022827256],"about_ca_topic_score_codex":0.0004780646,"about_ca_topic_score_gemma":0.00007755512,"teacher_disagreement_score":0.9410827,"about_ca_system_score_codex":0.0005906811,"about_ca_system_score_gemma":0.00082902133,"threshold_uncertainty_score":0.999966},"labels":[],"label_agreement":null},{"id":"W4255556422","doi":"10.1016/s0016-5085(03)00823-0","title":"Reply","year":2003,"lang":"en","type":"article","venue":"Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Barrier function; Entamoeba histolytica; Myosin light-chain kinase; Apoptosis; Tight junction; Biology; Molecular biology; Actin; Chemistry; Cell biology; Microbiology; Genetics","score_opus":0.0103274410671906,"score_gpt":0.25436658540261026,"score_spread":0.24403914433541965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255556422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96484756,0.000015121233,0.0013165821,0.000701942,0.00018428985,0.00008703845,9.456668e-7,0.0000372684,0.032809228],"genre_scores_gemma":[0.9935008,0.000004707789,0.0015021719,0.0033983379,0.00002543419,0.000012629814,0.000004660854,0.000006090726,0.0015451162],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995903,0.00002726486,0.000078277466,0.000107402586,0.000034847835,0.00016192197],"domain_scores_gemma":[0.9997549,0.00000508321,0.000018413553,0.00014777319,0.0000206979,0.000053124153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000042836786,0.00005097933,0.00010012833,0.000040776402,0.000030410969,0.0000017254707,0.000011751555,0.00002135687,0.00053942925],"category_scores_gemma":[0.00002678612,0.000040911644,0.000042958414,0.000030185949,0.00003171271,0.000013503743,0.000005338232,0.000056601268,0.00019901738],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008554994,0.00015356265,0.9955153,0.0000027101587,0.00006264584,0.000068454436,0.000013928968,6.953782e-7,0.00012893447,0.00082175387,0.0028897629,0.00025669872],"study_design_scores_gemma":[0.005428743,0.0034176921,0.82354945,0.000011436966,0.00014420658,0.0052028443,0.00004844819,0.000012738916,0.0007590985,0.00058847514,0.16077706,0.00005981697],"about_ca_topic_score_codex":0.000009764047,"about_ca_topic_score_gemma":0.0000037344785,"teacher_disagreement_score":0.17196587,"about_ca_system_score_codex":0.000023136925,"about_ca_system_score_gemma":0.000011284904,"threshold_uncertainty_score":0.5906372},"labels":[],"label_agreement":null},{"id":"W4283166986","doi":"10.3389/fimmu.2022.900553","title":"Gasdermins in Innate Host Defense Against Entamoeba histolytica and Other Protozoan Parasites","year":2022,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Entamoeba histolytica; Innate immune system; Host (biology); Protozoan parasite; Entamoeba; Biology; Protozoan infection; Microbiology; Immunology; Parasite hosting; Ecology; Immune system; Computer science","score_opus":0.0265848447407036,"score_gpt":0.3048807120969886,"score_spread":0.278295867356285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283166986","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009547168,0.9888795,0.00001803095,0.00003317215,0.0008685207,0.0026106404,0.000042745884,0.00004114506,0.006551532],"genre_scores_gemma":[0.00018492976,0.9955767,0.00071455946,0.00014670078,0.00003346568,0.0017146032,0.00014516801,0.00007835655,0.0014055585],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979886,0.00029277118,0.0006235033,0.00052950275,0.00010892258,0.00045669815],"domain_scores_gemma":[0.99915355,0.000086856875,0.00023321896,0.00045732138,0.0000140059265,0.000055024564],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019812971,0.000419578,0.0017763379,0.0011101722,0.00009440107,0.00001053523,0.00013171318,0.0003955323,0.0002243009],"category_scores_gemma":[0.000110840556,0.0003644695,0.00019941232,0.00051706017,0.00028599892,0.00004090564,0.00013765147,0.0009059493,0.000027716393],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012650568,0.00070240285,0.050759964,0.0023366602,0.0008847964,0.0011229994,0.00037637443,1.7316617e-7,0.0000010384706,0.00015864929,0.0013266042,0.9422038],"study_design_scores_gemma":[0.0015297103,0.00028182086,0.0009616678,0.0017613216,0.00035797563,0.00048843236,0.00014944155,0.0000050189583,6.4283887e-7,0.00005214583,0.99414706,0.00026476444],"about_ca_topic_score_codex":0.00018122957,"about_ca_topic_score_gemma":0.000051407114,"teacher_disagreement_score":0.99282044,"about_ca_system_score_codex":0.0010903807,"about_ca_system_score_gemma":0.00033049675,"threshold_uncertainty_score":0.99988073},"labels":[],"label_agreement":null},{"id":"W4294719160","doi":"10.18786/2072-0505-2022-50-026","title":"Challenging diagnosis of amebiasis in a non-endemic region: a clinical case","year":2022,"lang":"en","type":"article","venue":"Almanac of Clinical Medicine","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Quest University Canada","funders":"","keywords":"Medicine; Colonoscopy; Disease; Metronidazole; Bloating; Differential diagnosis; Internal medicine; Gastroenterology; Abdominal pain; Dysentery; Proctitis; Inflammatory bowel disease; Ulcerative colitis; Pathology; Antibiotics","score_opus":0.14456064910893462,"score_gpt":0.46275842247373833,"score_spread":0.3181977733648037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294719160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9866277,0.0013178029,0.00008452094,0.0049670404,0.0007924034,0.00054725533,0.0000071340746,0.000023769106,0.0056323707],"genre_scores_gemma":[0.9945822,0.0036975762,0.00021651463,0.0007093725,0.00040893067,0.00012386178,0.000012738061,0.000023833873,0.00022498997],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99611604,0.00033540613,0.0024460936,0.00042580775,0.00042503854,0.00025160718],"domain_scores_gemma":[0.9956391,0.0027627496,0.00065457897,0.0005963441,0.000119479235,0.00022773645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002525841,0.00017439706,0.0015255939,0.00032137445,0.000079618396,4.1361633e-7,0.0001221995,0.00014924615,0.00069176254],"category_scores_gemma":[0.0024950728,0.00013869043,0.00039533243,0.0006112399,0.00048012362,0.0000393973,0.00016090363,0.00081420096,0.0000061757573],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004344868,0.0021042107,0.91417253,0.000113185655,0.00034425533,0.0060173045,0.0002804956,0.000014969485,0.0000012353497,0.00016662244,0.003843977,0.07250672],"study_design_scores_gemma":[0.031636138,0.018332362,0.9202653,0.0014751853,0.0017243312,0.005126975,0.0056824214,0.0018771962,0.000033633885,0.0006865461,0.012820121,0.00033979752],"about_ca_topic_score_codex":0.0011681389,"about_ca_topic_score_gemma":0.00009056823,"teacher_disagreement_score":0.07216692,"about_ca_system_score_codex":0.000062210376,"about_ca_system_score_gemma":0.0001232592,"threshold_uncertainty_score":0.7574315},"labels":[],"label_agreement":null},{"id":"W4309662017","doi":"10.1111/vsu.13921","title":"Outcome in 38 dogs surgically treated for hepatic abscessation","year":2022,"lang":"en","type":"article","venue":"Veterinary Surgery","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Medicine; Surgery; Perioperative; Peritonitis; Medical record; Clinical significance; Pneumonia; Retrospective cohort study; Internal medicine","score_opus":0.07861984791694596,"score_gpt":0.3294500025585321,"score_spread":0.2508301546415861,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309662017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976309,0.000047822254,0.000047442245,0.00022401236,0.0003083419,0.0004219399,0.000029784505,0.000064640706,0.0012250972],"genre_scores_gemma":[0.9976197,0.000013145238,0.00009702605,0.00012211157,0.00003662631,0.00052422396,0.00023909302,0.000020511578,0.0013275937],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990629,0.0000758344,0.00032620068,0.0001949346,0.00013989481,0.0002002182],"domain_scores_gemma":[0.999357,0.00032658095,0.0000661592,0.00017099922,0.000027804761,0.000051444655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034327392,0.00010952555,0.00029978345,0.00027615507,0.0001398565,0.000007431573,0.000026536396,0.000034236018,0.00070347],"category_scores_gemma":[0.000054790475,0.000099540586,0.00015957085,0.0002889419,0.000017303415,0.00006082035,0.00003540167,0.00009291303,0.000016081774],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000540733,0.000496119,0.9939388,0.000063511914,0.00004531857,0.0006824165,0.000055569213,0.0000234856,0.00027912584,0.00002396629,0.00037323582,0.0034777399],"study_design_scores_gemma":[0.0018884628,0.0012474149,0.97119457,0.000033310946,0.00005517234,0.0006590203,0.000060306214,0.0007875745,0.000043664957,0.00009057629,0.023761341,0.00017860059],"about_ca_topic_score_codex":0.0003020797,"about_ca_topic_score_gemma":0.000004228839,"teacher_disagreement_score":0.023388106,"about_ca_system_score_codex":0.00021191534,"about_ca_system_score_gemma":0.00005537049,"threshold_uncertainty_score":0.7702503},"labels":[],"label_agreement":null},{"id":"W4323353297","doi":"10.1093/jcag/gwac036.260","title":"A260 PYOGENIC LIVER ABSCESS FORMATION SIX MONTHS AFTER PERFORATED APPENDICITIS IN AN OTHERWISE HEALTHY CHILD","year":2023,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Pyogenic liver abscess; Appendicitis; Abdominal pain; Abscess; Surgery; Liver abscess; Metronidazole; Abdominal mass; Appendix; Laparotomy; Radiology; General surgery; Antibiotics","score_opus":0.008569228362162423,"score_gpt":0.2424354277902934,"score_spread":0.23386619942813097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323353297","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924292,0.000017043878,0.00001026996,0.0068491157,0.00027967733,0.00019498666,0.000036019654,0.000005403036,0.00017825863],"genre_scores_gemma":[0.99839693,0.000046171903,0.000027284368,0.0012544922,0.00008548103,0.000006917961,0.000016311937,0.00001146005,0.0001549317],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998833,0.00019344148,0.00042105708,0.00007111209,0.00019954809,0.00028185343],"domain_scores_gemma":[0.99890906,0.000021310687,0.0005738919,0.000111293295,0.00021546858,0.00016900885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005038925,0.00008143153,0.00025600527,0.0004953609,0.00009406751,0.000010149483,0.00008345401,0.00010570306,0.00011654455],"category_scores_gemma":[0.000077017576,0.0000627458,0.00011502655,0.00024829316,0.00002548926,0.00015984221,0.000010643792,0.00024942638,0.00001783975],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004799728,0.000076736724,0.9973122,0.000014499095,0.00009761246,0.000058403108,0.00039215217,0.00021948917,0.000017834484,0.0000051405937,0.001093233,0.0002327252],"study_design_scores_gemma":[0.002554997,0.0010264247,0.99466866,0.00006699426,0.000072829964,0.00018065094,0.00010173315,0.0008842819,0.000016163413,0.000021297117,0.000378478,0.000027470021],"about_ca_topic_score_codex":0.006705184,"about_ca_topic_score_gemma":0.5899609,"teacher_disagreement_score":0.5832557,"about_ca_system_score_codex":0.0014983474,"about_ca_system_score_gemma":0.00022067984,"threshold_uncertainty_score":0.9999092},"labels":[],"label_agreement":null},{"id":"W4323869207","doi":"10.1016/j.jpag.2023.01.231","title":"88. Acute pain and hemoperitoneum in adolescent girl with juvenile cystic adenomyoma","year":2023,"lang":"en","type":"article","venue":"Journal of Pediatric and Adolescent Gynecology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Adenomyoma; Medicine; Girl; Juvenile; Pediatrics; Internal medicine; Developmental psychology; Psychology","score_opus":0.011164451469422838,"score_gpt":0.25814905058627496,"score_spread":0.24698459911685214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323869207","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966535,0.0012040033,0.00017885756,0.0013474993,0.00024584463,0.00025239956,0.000004401615,0.000018861801,0.00009464383],"genre_scores_gemma":[0.99572885,0.002778021,0.0002904616,0.0004351666,0.00043080206,0.000006236376,0.0000044837134,0.000018376135,0.00030760572],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988232,0.000104335224,0.000417946,0.00018457435,0.00016254449,0.00030734602],"domain_scores_gemma":[0.9992193,0.00016906606,0.00021620796,0.00009529038,0.00008907376,0.0002110642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046514664,0.00016528949,0.00045951866,0.00045906074,0.0000791575,0.000014124709,0.00004442306,0.00011638634,0.000034461314],"category_scores_gemma":[0.00013685403,0.00011629051,0.000058983896,0.0003978847,0.00007380504,0.000074203046,0.00004568838,0.000367025,0.000012113852],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032799403,0.00061637437,0.9829943,0.00020203822,0.00010187559,0.0026475163,0.00011099232,0.000012464837,0.00007344753,0.000013938262,0.0043846453,0.008514405],"study_design_scores_gemma":[0.004872927,0.0024613834,0.9876741,0.0001111945,0.0005170177,0.0016324857,0.00028291103,0.00018123892,0.00001554511,0.00004252199,0.0020781194,0.00013055706],"about_ca_topic_score_codex":0.000005174709,"about_ca_topic_score_gemma":0.000010544428,"teacher_disagreement_score":0.008383848,"about_ca_system_score_codex":0.000105348416,"about_ca_system_score_gemma":0.00018793432,"threshold_uncertainty_score":0.47421893},"labels":[],"label_agreement":null},{"id":"W4362577501","doi":"10.12659/ajcr.939322","title":"Cryptogenic Hypervirulent Klebsiella pneumoniae Pyogenic Liver Abscess: A Case Report","year":2023,"lang":"en","type":"article","venue":"American Journal of Case Reports","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"University of Ottawa","keywords":"Medicine; Pyogenic liver abscess; Klebsiella pneumoniae; Liver abscess; Etiology; Chills; Abscess; Surgery; Internal medicine","score_opus":0.017163297384506192,"score_gpt":0.2959678036652598,"score_spread":0.27880450628075365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362577501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967479,0.0005020666,0.00014637414,0.00029658797,0.0005301426,0.00022023305,0.0000040763575,0.0000740729,0.0014785216],"genre_scores_gemma":[0.99744755,0.00036564626,0.00067188864,0.00013209089,0.00032637236,0.000012923371,0.0000073671918,0.000049396283,0.0009867911],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.997605,0.00007044222,0.0011601588,0.0003050128,0.0004873995,0.00037196785],"domain_scores_gemma":[0.9969135,0.00010132289,0.001518914,0.00057993026,0.00045363535,0.00043270772],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007117998,0.00023588509,0.00066437584,0.00044213125,0.00018275957,0.000027034406,0.000031620093,0.000057811074,0.00019945117],"category_scores_gemma":[0.00022147577,0.00018336126,0.0005035976,0.00085628394,0.00019003575,0.00012249695,0.000051158404,0.00031232843,0.000067679925],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061101484,0.00022467648,0.016167618,0.000021689944,0.00067476794,0.9591333,0.00023885997,0.00003957988,0.00038969005,0.0000027316496,0.001047919,0.021998033],"study_design_scores_gemma":[0.0005325906,0.00093514565,0.0035378735,0.0000828322,0.00084169424,0.9863921,0.0009808731,0.00005840254,0.00035523175,0.00003546829,0.006088276,0.0001595037],"about_ca_topic_score_codex":0.0008005117,"about_ca_topic_score_gemma":0.00004353783,"teacher_disagreement_score":0.027258776,"about_ca_system_score_codex":0.00020776616,"about_ca_system_score_gemma":0.0005123265,"threshold_uncertainty_score":0.74772555},"labels":[],"label_agreement":null},{"id":"W4378745883","doi":"10.1097/mcg.0000000000001871","title":"Management of Pyogenic Liver Abscesses","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta","funders":"","keywords":"Medicine; Pyogenic liver abscess; Liver abscess; General surgery; Surgery; Abscess","score_opus":0.06946499687351507,"score_gpt":0.41534619322583566,"score_spread":0.3458811963523206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378745883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99733293,0.00007329665,0.00042257237,0.00067234057,0.0006096895,0.000077718905,0.0000020414798,0.000010992802,0.0007984016],"genre_scores_gemma":[0.9957212,0.0017843546,0.0014641782,0.00024532437,0.00019908797,0.000001687309,0.0000020495202,0.000008463833,0.0005736423],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985406,0.00007872169,0.00095358404,0.00009183661,0.00016809795,0.00016715228],"domain_scores_gemma":[0.99898875,0.00011577457,0.0004922479,0.00013802135,0.00015455614,0.00011063026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006114968,0.00007166933,0.0004953904,0.00014684675,0.000016995555,0.0000020174832,0.000075031254,0.00006464864,0.0001900364],"category_scores_gemma":[0.00007498046,0.000050114584,0.00036308687,0.00011964026,0.000105167266,0.00003305195,0.000050295657,0.00020309097,0.00007299484],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018118314,0.00087360805,0.9750244,0.00008600513,0.0014740599,0.0021648973,0.000017757287,0.00002392231,0.000023065626,0.000069484064,0.0031565437,0.015274426],"study_design_scores_gemma":[0.004295878,0.0052548484,0.98612934,0.00013911906,0.0004873309,0.0007059751,0.00005462454,0.00004361414,0.000033179535,0.00012976785,0.0027047954,0.000021508602],"about_ca_topic_score_codex":0.0000024759436,"about_ca_topic_score_gemma":0.000002123419,"teacher_disagreement_score":0.015252918,"about_ca_system_score_codex":0.00001366969,"about_ca_system_score_gemma":0.000027612221,"threshold_uncertainty_score":0.20807652},"labels":[],"label_agreement":null},{"id":"W4379056065","doi":"10.5334/aogh.4070","title":"Comparative Analysis of Percutaneous Drainage versus Operative Drainage of Intra-Abdominal Abscesses in a Resource-Limited Setting: The Tanzanian Experience","year":2023,"lang":"en","type":"article","venue":"Annals of Global Health","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakeridge Health","funders":"","keywords":"Drainage; Percutaneous; Medicine; Surgery","score_opus":0.06758859735924697,"score_gpt":0.4439515164853072,"score_spread":0.37636291912606024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379056065","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9850591,0.00028039436,0.000020609186,0.0034392986,0.000040414823,0.0004576817,0.00020884498,0.000019609928,0.010474092],"genre_scores_gemma":[0.9992941,0.00008906888,0.000116623225,0.00036343717,0.000014029748,0.00001568299,0.00005567092,0.0000050663493,0.00004629669],"study_design_codex":"qualitative","study_design_gemma":"observational","domain_scores_codex":[0.9982825,0.00023016766,0.00059485715,0.00024382245,0.00032309123,0.00032558767],"domain_scores_gemma":[0.99863505,0.0003360231,0.0003420322,0.00031706307,0.00026267627,0.00010714072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046126396,0.0001573337,0.0008039263,0.00024568086,0.00012027398,0.0000066116845,0.00013009556,0.000056447585,0.00004659109],"category_scores_gemma":[0.0001931938,0.00011113542,0.0001753234,0.0032519314,0.00034405946,0.000053353684,0.00005521898,0.00011579795,0.0000041238645],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.033865906,0.010559786,0.21937649,0.0024511898,0.022490138,0.0025229694,0.5445187,0.010828286,0.003293171,0.06250128,0.016393203,0.07119885],"study_design_scores_gemma":[0.0045619314,0.009995458,0.7946096,0.00081014185,0.0010518368,0.00012381692,0.17280859,0.010207376,0.003330003,0.0006240572,0.0014839596,0.00039324444],"about_ca_topic_score_codex":0.0027846063,"about_ca_topic_score_gemma":0.0014572316,"teacher_disagreement_score":0.5752331,"about_ca_system_score_codex":0.00013022734,"about_ca_system_score_gemma":0.00030688915,"threshold_uncertainty_score":0.4531971},"labels":[],"label_agreement":null},{"id":"W4380272509","doi":"10.14740/gr1611","title":"Does Liver Resection Remain a Viable Option in Patients With Pyogenic Liver Abscess? A Single-Center Experience","year":2023,"lang":"en","type":"article","venue":"Gastroenterology Research","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Percutaneous; Surgery; Liver abscess; Pyogenic liver abscess; Pelvis; Etiology; Abdomen; Abscess; Radiology; Medical record; Internal medicine","score_opus":0.04325671550066272,"score_gpt":0.32336976542121576,"score_spread":0.280113049920553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380272509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99833745,0.00000881116,0.00008873034,0.00027123172,0.00013655677,0.0008148567,0.000008878216,0.00006992323,0.0002635884],"genre_scores_gemma":[0.9978524,0.000047284655,0.00017660782,0.00007769448,0.00006345402,0.00031737777,0.000075795135,0.00002562145,0.0013637729],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977754,0.00028098203,0.00021626793,0.000459124,0.00049210584,0.0007761251],"domain_scores_gemma":[0.9991605,0.000056639008,0.000045697,0.0003267232,0.00028653783,0.00012385406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045508568,0.00014144261,0.00021941861,0.0007428752,0.0001914585,0.000025900146,0.000094877396,0.000109024375,0.00018843712],"category_scores_gemma":[0.00007447605,0.0000881661,0.00004953104,0.0007255659,0.00026091922,0.00017828878,0.00013196352,0.00041381596,0.00027602084],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004093582,0.0012100744,0.9927438,0.000041367926,0.000058954596,0.00024066505,0.00054250093,0.000009325072,0.0003417401,0.000009861374,0.00029593677,0.00041221367],"study_design_scores_gemma":[0.0054577845,0.0036053099,0.98969173,0.00012728632,0.0000138714895,0.00005591381,0.00022298898,0.00036599618,0.00016856262,0.000025945628,0.00020809265,0.0000564944],"about_ca_topic_score_codex":0.00029973473,"about_ca_topic_score_gemma":0.0011389491,"teacher_disagreement_score":0.0030520246,"about_ca_system_score_codex":0.00035630257,"about_ca_system_score_gemma":0.000039071525,"threshold_uncertainty_score":0.35953093},"labels":[],"label_agreement":null},{"id":"W4380272568","doi":"10.14740/gr1622","title":"Intestinal Parasitic Infections in 2023","year":2023,"lang":"en","type":"review","venue":"Gastroenterology Research","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Vomiting; Medicine; Diarrhea; Nausea; Abdominal pain; Dysentery; Malnutrition; Protozoan infection; Helminths; Iron-deficiency anemia; Malaria; Anemia; Gastroenterology; Immunology; Intensive care medicine; Internal medicine; Pathology","score_opus":0.2611764757328756,"score_gpt":0.5200963985530621,"score_spread":0.2589199228201865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380272568","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004183974,0.98713917,0.00005665738,0.00023139406,0.00054533634,0.002695275,0.000058039375,0.00019386239,0.004896302],"genre_scores_gemma":[0.0003748445,0.99336904,0.00006906758,0.000020955944,0.00021714935,0.0012911808,0.00021840484,0.000071012444,0.004368368],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968191,0.0007566733,0.0005643761,0.0005446636,0.00031932184,0.0009959113],"domain_scores_gemma":[0.99853426,0.0005447724,0.00007999053,0.00048441038,0.00016355386,0.00019298297],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010451865,0.00028829733,0.0013254829,0.0022018899,0.00015510469,0.000021277678,0.00015366754,0.00031911914,0.00029817375],"category_scores_gemma":[0.0005450973,0.00023197976,0.00033173113,0.0013995899,0.0003287173,0.000035300945,0.00016021324,0.002115931,0.004753564],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022825634,0.00345187,0.5747419,0.021647394,0.0018314528,0.0071579968,0.0000629026,0.0000021248857,6.3716664e-7,0.0002421551,0.008222565,0.38241076],"study_design_scores_gemma":[0.004667878,0.0074615986,0.054867778,0.046961024,0.0017392877,0.021038374,0.00011438133,0.000042220177,2.1441372e-7,0.0004805151,0.86218774,0.00043896967],"about_ca_topic_score_codex":0.00032491356,"about_ca_topic_score_gemma":0.000554605,"teacher_disagreement_score":0.85396516,"about_ca_system_score_codex":0.00054800673,"about_ca_system_score_gemma":0.00046653178,"threshold_uncertainty_score":0.99602133},"labels":[],"label_agreement":null},{"id":"W4380987552","doi":"10.3390/microorganisms11061598","title":"Regulatory Functions of Hypoxia in Host–Parasite Interactions: A Focus on Enteric, Tissue, and Blood Protozoa","year":2023,"lang":"en","type":"review","venue":"Microorganisms","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Protozoa; Immune system; Protozoan infection; Hypoxia (environmental); Context (archaeology); Cell biology; Immunology; Microbiology; Oxygen","score_opus":0.031611579362204,"score_gpt":0.333594312505211,"score_spread":0.301982733143007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380987552","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008604283,0.98358643,0.000028603326,0.00006406427,0.00048734338,0.0048346994,0.00019325627,0.00015812223,0.0020431762],"genre_scores_gemma":[0.002318746,0.98514783,0.0002783301,0.000025078249,0.00014435122,0.0008460073,0.00016517969,0.00014751668,0.010926978],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99845225,0.000083005965,0.00062848104,0.0004538114,0.00014655324,0.00023591121],"domain_scores_gemma":[0.9990003,0.00010871596,0.00028319212,0.0004602672,0.000057074794,0.00009044258],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012174205,0.00037401417,0.0012355022,0.0006741959,0.000082694314,0.000018233704,0.000066909175,0.0002252626,0.00022677216],"category_scores_gemma":[0.000051753246,0.00030265478,0.00020034393,0.000624832,0.00008169977,0.000051224724,0.000073799085,0.0004181195,0.00046487222],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015458044,0.005000711,0.0019095262,0.030083355,0.0043104333,0.0010070566,0.0006224385,2.5785803e-7,0.008708176,0.0003428729,0.0025644328,0.94529617],"study_design_scores_gemma":[0.0026890084,0.0017340224,0.0046776338,0.034497675,0.004610215,0.0021305447,0.00010171528,4.483589e-7,0.0029114592,0.00008691995,0.94599384,0.00056652306],"about_ca_topic_score_codex":0.00013779798,"about_ca_topic_score_gemma":0.0000712256,"teacher_disagreement_score":0.9447296,"about_ca_system_score_codex":0.00018574132,"about_ca_system_score_gemma":0.00017428283,"threshold_uncertainty_score":0.99994254},"labels":[],"label_agreement":null},{"id":"W4385699027","doi":"10.53555/sfs.v8i3.1386","title":"Intestinal Parasitic Infections among Aqaba population (southern Jordan)","year":2022,"lang":"en","type":"article","venue":"Journal of Survey in Fisheries Sciences","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Entamoeba histolytica; Enterobius; Malaria; Population; Giardia; Medicine; Entamoeba; Tropical medicine; Tuberculosis; Helminths; Biology; Immunology; Veterinary medicine; Internal medicine; Environmental health; Pathology","score_opus":0.10928967199555419,"score_gpt":0.30483505877056377,"score_spread":0.1955453867750096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385699027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977443,0.000042432523,0.00007314068,0.00021206099,0.00046703182,0.000085836786,0.000008543654,0.000008593537,0.001358016],"genre_scores_gemma":[0.9992888,0.000007177865,0.00031189437,0.000041858704,0.000049606097,0.0000073024275,0.0000067103956,0.0000053239955,0.00028133113],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987369,0.00025127173,0.00036518765,0.00010590869,0.00038799478,0.00015273665],"domain_scores_gemma":[0.99929744,0.00019814984,0.00025544825,0.000069803355,0.00011749979,0.00006163098],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00169992,0.000078151075,0.00019618013,0.00034177073,0.00041970366,0.000041951826,0.00008752178,0.000019538873,0.0005171683],"category_scores_gemma":[0.00046895412,0.00006093998,0.00006932585,0.00095722394,0.00021179118,0.00029223642,0.000027852566,0.00026725009,0.000003579347],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004234025,0.00025746095,0.99811184,0.0000035894757,0.000016904263,0.000050151117,0.0003165847,0.0004606771,0.00001632553,0.000016313816,0.0001331941,0.00057461753],"study_design_scores_gemma":[0.00042241227,0.001283877,0.9958288,0.000029629588,0.000021097949,0.000710823,0.0011141511,0.00008128037,0.000010425199,0.00031180997,0.00012928782,0.000056401946],"about_ca_topic_score_codex":0.005987071,"about_ca_topic_score_gemma":0.0025430226,"teacher_disagreement_score":0.0034440486,"about_ca_system_score_codex":0.00019333119,"about_ca_system_score_gemma":0.00016173336,"threshold_uncertainty_score":0.90507007},"labels":[],"label_agreement":null},{"id":"W4386591625","doi":"10.1097/eus.0000000000000020","title":"Safety and clinical efficacy of EUS–guided pelvic abscess drainage","year":2023,"lang":"en","type":"article","venue":"Endoscopic Ultrasound","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Medicine; Abscess; Surgery; Drainage; Radiology; Retrospective cohort study","score_opus":0.03059465176279085,"score_gpt":0.36114958563828453,"score_spread":0.3305549338754937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386591625","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96687335,0.00009969238,0.00010105699,0.00014840443,0.00032788233,0.00033006768,0.0000150985115,0.000106421496,0.03199803],"genre_scores_gemma":[0.9942745,0.0003538695,0.00038610297,0.00006973921,0.000134541,0.0000055050155,0.00005630125,0.000015326996,0.0047041047],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99892277,0.00005313413,0.00040486373,0.0002476297,0.00015875106,0.00021283791],"domain_scores_gemma":[0.9985019,0.00095915043,0.00008678527,0.0002858766,0.000048064212,0.00011820194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026049724,0.00012520078,0.00035028995,0.00010357515,0.00009869425,0.000010610255,0.000048769707,0.000089566754,0.00031376546],"category_scores_gemma":[0.0005865863,0.00010093446,0.000103992694,0.00029377048,0.00017521251,0.000042718035,0.000032455744,0.00015108619,0.00016027149],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016153726,0.0005438655,0.9881027,0.00013774847,0.0005093526,0.000105943946,0.00047997336,0.00000405084,0.0011689839,0.0020122959,0.0012275189,0.005546028],"study_design_scores_gemma":[0.005260055,0.0002866241,0.98860896,0.000083729305,0.00018859575,0.000054866603,0.00010244724,0.000016401993,0.00034218168,0.0002466444,0.004738594,0.00007092904],"about_ca_topic_score_codex":0.00010368985,"about_ca_topic_score_gemma":0.000013883878,"teacher_disagreement_score":0.027401162,"about_ca_system_score_codex":0.000033862896,"about_ca_system_score_gemma":0.00006693368,"threshold_uncertainty_score":0.4115988},"labels":[],"label_agreement":null},{"id":"W4387568446","doi":"10.3138/jammi-2023-0004","title":"Antibiotic treatment durations for pyogenic liver abscesses: A systematic review","year":2023,"lang":"en","type":"review","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Health Sciences Centre; Sunnybrook Hospital; Sunnybrook Health Science Centre; Sinai Health System","funders":"","keywords":"Medicine; Antibiotics; Meta-analysis; Pyogenic liver abscess; Internal medicine; Observational study; Liver abscess; Meta-regression; Randomized controlled trial; Abscess; Surgery","score_opus":0.0177362134602242,"score_gpt":0.3053226089672994,"score_spread":0.2875863955070752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387568446","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018882805,0.9958761,0.000008411471,0.0010364428,0.00070473086,0.0018607854,0.00029872832,0.0000071628533,0.00001883493],"genre_scores_gemma":[0.001005983,0.99756217,0.0000031417412,0.0004132161,0.00013296485,0.000056355104,0.000068652545,0.00001942697,0.0007380635],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99799407,0.00035159042,0.0011018981,0.0001337094,0.00025183463,0.00016690635],"domain_scores_gemma":[0.9961722,0.00095398567,0.0021254963,0.0001886341,0.00034590176,0.00021380163],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006840546,0.00021482275,0.0019798942,0.00010831373,0.0001426377,0.000007339675,0.0001245086,0.00025280553,0.0000340267],"category_scores_gemma":[0.0038727631,0.000111623296,0.0007745071,0.00023785818,0.000053063362,0.00002431045,0.000031646894,0.00023715486,0.000002716408],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020283356,0.0004705972,0.0007356369,0.95964223,0.009945011,0.00010202232,0.000014949454,5.1808576e-7,8.2933843e-7,0.000111172,0.022254275,0.0067024915],"study_design_scores_gemma":[0.0022362089,0.0006185318,0.00028664502,0.64500415,0.06254006,0.0018359527,0.000014946106,0.0000058845494,0.0000018974717,0.00003101216,0.2871841,0.00024058922],"about_ca_topic_score_codex":0.0036578658,"about_ca_topic_score_gemma":0.020993436,"teacher_disagreement_score":0.31463805,"about_ca_system_score_codex":0.0015285528,"about_ca_system_score_gemma":0.0058707576,"threshold_uncertainty_score":0.99976504},"labels":[],"label_agreement":null},{"id":"W4388295482","doi":"10.1101/2023.11.01.23297932","title":"AMEBIASIS: AN ANALYSIS OF ITS DISTINCTIVE PRESENTATION IN THE CONTEXT OF JORDANIAN CASES","year":2023,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Leukocytosis; Medicine; Population; Pediatrics; Diarrhea; Quarter (Canadian coin); Demography; Environmental health; Internal medicine; Geography","score_opus":0.07469258626491912,"score_gpt":0.3674560165994529,"score_spread":0.2927634303345338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388295482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982789,0.00009578,0.00008799459,0.00015726092,0.00010828311,0.0005606127,0.00020590608,0.000018001256,0.0004872326],"genre_scores_gemma":[0.9991796,0.00008226296,0.000039105187,0.000022478343,0.000034227673,0.00012241406,0.0003297272,0.000013828014,0.0001763539],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987929,0.00019186057,0.00038891216,0.00025721733,0.00026299016,0.000106111416],"domain_scores_gemma":[0.998735,0.0002776705,0.0002879142,0.00047061968,0.00019346844,0.00003534567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030727324,0.0001376048,0.0005296959,0.0005029376,0.000028920302,0.0000069399675,0.00010707122,0.00009509054,0.00006784826],"category_scores_gemma":[0.00036695122,0.00009179843,0.00022130838,0.000749762,0.00007361408,0.000032633765,0.00006841034,0.0001918974,0.0000061358824],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086378306,0.0004598695,0.99220437,0.00014671615,0.0017742706,0.000112807604,0.003582992,0.00027573018,0.00007633228,0.0001457689,0.000013622589,0.0011211229],"study_design_scores_gemma":[0.00041911483,0.00019993467,0.98940474,0.0001382592,0.0032209714,0.0000060368034,0.0037954205,0.0019204657,0.0007545872,0.000065527034,0.0000138983505,0.00006104982],"about_ca_topic_score_codex":0.004814584,"about_ca_topic_score_gemma":0.005269922,"teacher_disagreement_score":0.0027996544,"about_ca_system_score_codex":0.000058345508,"about_ca_system_score_gemma":0.00007209972,"threshold_uncertainty_score":0.7278243},"labels":[],"label_agreement":null},{"id":"W4388946150","doi":"10.1099/mgen.0.001143","title":"Comparative analysis of mitochondrion-related organelles in anaerobic amoebozoans","year":2023,"lang":"en","type":"article","venue":"Microbial Genomics","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Alberta","funders":"Canadian Institutes of Health Research; European Commission; Univerzita Komenského v Bratislave; Univerzita Karlova v Praze; Grantová Agentura České Republiky; H2020 European Research Council; Ministerstvo Školství, Mládeže a Tělovýchovy","keywords":"Organelle; Biology; Catabolism; Mitochondrion; Metabolism; Extremophile; Biochemistry; Citric acid cycle; Metabolic pathway; Metabolic network; Cell biology; Enzyme; Thermophile","score_opus":0.019748403887139637,"score_gpt":0.2850693573685533,"score_spread":0.2653209534814137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388946150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982136,0.00005937511,0.00003180595,0.000077306184,0.00012329515,0.00027401478,0.000059204314,0.00004448711,0.0011169196],"genre_scores_gemma":[0.9975903,0.000081382335,0.0004658841,0.000031631458,0.000017486314,0.0000065132363,0.00039741507,0.000011619803,0.0013977634],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99915546,0.000030844447,0.00035428556,0.00020753461,0.00005955669,0.00019231997],"domain_scores_gemma":[0.9995419,0.000042775624,0.00009292446,0.00021199496,0.00006140572,0.000049038517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008136542,0.00012265511,0.0005351398,0.00082698226,0.000049009017,0.000006244008,0.000053083153,0.000092203445,0.00022641894],"category_scores_gemma":[0.00001103077,0.00011422112,0.00017788699,0.0025804592,0.00007545551,0.000024598976,0.000036160603,0.00011259016,0.00020412513],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022638039,0.0008284722,0.14199437,0.00003542418,0.006838936,0.00014517967,0.010656047,0.01656917,0.8191926,0.0003119224,0.002655401,0.0005461147],"study_design_scores_gemma":[0.005664543,0.00041108107,0.9208743,0.00008873751,0.0054161157,0.000041330706,0.0025837056,0.00671148,0.052704256,0.00010158773,0.004964777,0.00043809335],"about_ca_topic_score_codex":0.00046571248,"about_ca_topic_score_gemma":0.00088240294,"teacher_disagreement_score":0.77887994,"about_ca_system_score_codex":0.00015089926,"about_ca_system_score_gemma":0.00009365441,"threshold_uncertainty_score":0.4657802},"labels":[],"label_agreement":null},{"id":"W4389024135","doi":"10.1096/fasebj.30.1_supplement.57.6","title":"<i>Entamoeba histolytica</i> Stimulates the Release of the Alarmin Molecule HMGB1 upon Contact with Macrophages","year":2016,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"HMGB1; Secretion; Entamoeba histolytica; Biology; Inflammasome; Cell biology; Microbiology; Inflammation; Extracellular; Immune system; Histone; Immunology; Biochemistry","score_opus":0.007871135949596299,"score_gpt":0.2315235353111034,"score_spread":0.2236523993615071,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389024135","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913277,0.00033220602,0.00043307408,0.005042827,0.00015660752,0.00028462376,0.000016621712,0.000012389473,0.0023939647],"genre_scores_gemma":[0.9968376,0.000100132944,0.000057230227,0.0004210957,0.0001132567,0.0000062792337,7.385695e-7,0.000019194576,0.002444469],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990347,0.00013555189,0.00021667399,0.0001016993,0.00029776705,0.00021359303],"domain_scores_gemma":[0.9989821,0.00020040279,0.00020622938,0.00041431747,0.000108682136,0.000088304434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025816774,0.00013835683,0.00018127955,0.000031920023,0.0003826449,0.000017541699,0.00017958492,0.00003395959,0.00033021357],"category_scores_gemma":[0.000060041908,0.000038512808,0.00015021142,0.0001235764,0.0001989996,0.000055936718,0.00004130451,0.00024507483,0.000034025037],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00301918,0.0013082332,0.22615606,0.00004878233,0.002285201,0.0008883803,0.0012440571,0.00014843064,0.731586,0.001485176,0.009427551,0.022402992],"study_design_scores_gemma":[0.014104599,0.0025568479,0.1743918,0.001113763,0.0025030572,0.010686347,0.00077676657,0.00027368052,0.786525,0.000736056,0.0060026944,0.00032937087],"about_ca_topic_score_codex":0.000060868864,"about_ca_topic_score_gemma":0.000011978293,"teacher_disagreement_score":0.054939047,"about_ca_system_score_codex":0.00011628587,"about_ca_system_score_gemma":0.00014075938,"threshold_uncertainty_score":0.3615607},"labels":[],"label_agreement":null},{"id":"W4391873666","doi":"10.1093/jcag/gwad061.060","title":"A60 INVESTIGATING THE ROLE OF NUCLEOTIDE-BINDING OLIGOMERIZATION DOMAIN (NOD) PROTEINS DURING BACTERIAL INFECTIONS IN INTESTINAL EPITHELIAL CELLS","year":2024,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Nod; Nucleotide; Biology; Cell biology; Microbiology; Genetics; Gene","score_opus":0.005153891683632922,"score_gpt":0.21369425692692687,"score_spread":0.20854036524329395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391873666","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965333,0.000007994653,0.000047200312,0.0022789775,0.00065562903,0.00023057805,0.000032619762,0.000004598809,0.00020914483],"genre_scores_gemma":[0.9993736,0.0000061633104,0.00026768332,0.000053904303,0.0002072496,0.0000058246746,0.0000035220403,0.000012519687,0.000069532776],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99872386,0.00024500728,0.0005449242,0.0000794649,0.0001903919,0.00021633659],"domain_scores_gemma":[0.9989152,0.00008145699,0.0006484103,0.00009399895,0.00016934519,0.0000915942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063169654,0.00009002168,0.00025036017,0.00039026196,0.00013245086,0.000021416477,0.00009200649,0.00007836368,0.00004543807],"category_scores_gemma":[0.00038371544,0.000061418825,0.00015008062,0.00028227924,0.00007360957,0.0000984781,0.00002319065,0.00035594506,0.0000026358275],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006888518,0.000060574046,0.8379007,0.000029786297,0.00019778489,0.000010240076,0.00060604,0.00017346165,0.1606445,0.00016674494,0.000032850225,0.00010841639],"study_design_scores_gemma":[0.0035022912,0.0015767883,0.96033615,0.0009366007,0.00036866736,0.00072198507,0.00052377244,0.00041269857,0.02921429,0.0014288486,0.00088427943,0.00009361677],"about_ca_topic_score_codex":0.004753349,"about_ca_topic_score_gemma":0.06912301,"teacher_disagreement_score":0.13143021,"about_ca_system_score_codex":0.0012040166,"about_ca_system_score_gemma":0.00048052942,"threshold_uncertainty_score":0.94786304},"labels":[],"label_agreement":null},{"id":"W4392001340","doi":"10.3748/wjg.v30.i7.742","title":"Diagnostic and therapeutic role of endoscopic ultrasound in liver diseases: A systematic review and meta-analysis","year":2024,"lang":"en","type":"review","venue":"World Journal of Gastroenterology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Endoscopic ultrasound; Meta-analysis; Cochrane Library; Hepatology; MEDLINE; Radiology; Liver biopsy; Systematic review; Internal medicine; Fine-needle aspiration; Liver abscess; Biopsy; Gastroenterology; Surgery; Abscess","score_opus":0.029037031723322042,"score_gpt":0.32637329940434645,"score_spread":0.2973362676810244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392001340","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013797973,0.9986851,0.000011785904,0.000082795596,0.000034283217,0.000979491,0.00004950126,0.0000032049188,0.00001585817],"genre_scores_gemma":[0.015906502,0.9835561,0.00004813411,0.00020123362,0.000020240512,0.000099379635,0.000009514147,0.000021007285,0.00013791237],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9975397,0.000548486,0.0013562139,0.00021299942,0.0001565083,0.00018612084],"domain_scores_gemma":[0.99780446,0.0008094583,0.0009468472,0.00024079501,0.00007558216,0.00012282586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003609642,0.00032030477,0.0076428847,0.0011274163,0.000017085364,0.000012676744,0.00008146143,0.000060325456,0.00016823346],"category_scores_gemma":[0.00020057517,0.00017397047,0.0015454857,0.00047442512,0.000104690116,0.00003139669,0.000039895753,0.00036895013,0.0000040188693],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024828552,0.00027803006,0.007372381,0.705794,0.2851323,0.00043915407,0.00004025296,3.1561027e-7,5.981216e-8,0.00002668336,0.000028490145,0.0008635149],"study_design_scores_gemma":[0.00031481375,0.0006179242,0.0005935742,0.043840937,0.95109534,0.0023006613,0.000010253742,8.908935e-7,1.4650473e-8,0.000032740307,0.0011461315,0.00004670827],"about_ca_topic_score_codex":0.00001374949,"about_ca_topic_score_gemma":0.00011230681,"teacher_disagreement_score":0.66596305,"about_ca_system_score_codex":0.000073357354,"about_ca_system_score_gemma":0.00006222071,"threshold_uncertainty_score":0.709431},"labels":[],"label_agreement":null},{"id":"W4392105485","doi":"10.1002/j.1536-4801.2000.tb02688.x","title":"Is There an Infectious Etiology to Abdominal Pain in Children?","year":2000,"lang":"en","type":"article","venue":"Journal of Pediatric Gastroenterology and Nutrition","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Medicine; Etiology; Abdominal pain; Pediatrics; Intensive care medicine; Internal medicine","score_opus":0.005553693548377709,"score_gpt":0.25041364454239895,"score_spread":0.24485995099402125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392105485","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99834627,0.000234268,0.000259106,0.0008578847,0.00006109534,0.0001872333,0.000004604955,0.000006329625,0.000043223696],"genre_scores_gemma":[0.9965092,0.0013661059,0.00064465334,0.00083069527,0.0006087828,0.000009679285,0.0000063091034,0.000006485782,0.00001809447],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99917704,0.00016822031,0.0002931196,0.00011772845,0.00006802569,0.0001758737],"domain_scores_gemma":[0.99963313,0.000022907132,0.000093930976,0.00006610285,0.00005882663,0.00012512805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003477551,0.00009283839,0.00024262008,0.00034213852,0.00004657858,0.0000055247615,0.000028843027,0.00010003095,0.00028649456],"category_scores_gemma":[0.000019361783,0.00007644691,0.00006337946,0.0001171169,0.00002775557,0.00009092602,0.000005736808,0.0002237422,0.000010073219],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020370523,0.0010714825,0.98905826,0.000012073994,0.00004830887,0.00006249288,0.0000745298,0.0000043824007,0.00002264904,0.0000018597781,0.0007004328,0.0069064675],"study_design_scores_gemma":[0.0054417434,0.014715943,0.9757625,0.000017871089,0.00014900342,0.003495658,0.000029761079,0.000016792159,0.0000069552207,0.0001712176,0.0001576249,0.000034965986],"about_ca_topic_score_codex":0.0000238719,"about_ca_topic_score_gemma":0.000020203503,"teacher_disagreement_score":0.013644461,"about_ca_system_score_codex":0.00004166002,"about_ca_system_score_gemma":0.000017160382,"threshold_uncertainty_score":0.31369144},"labels":[],"label_agreement":null},{"id":"W4394796460","doi":"10.1016/j.exppara.2024.108750","title":"Enteropathogenic Escherichia coli modulates the virulence and pathogenicity of Entamoeba dispar","year":2024,"lang":"en","type":"article","venue":"Experimental Parasitology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Pró-Reitoria de Pesquisa, Universidade Federal de Minas Gerais; National Council for Forest Research and Development; Movember Canada; Universidade Federal de Minas Gerais; Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Virulence; Entamoeba histolytica; Biology; Microbiology; Dispar; Entamoeba; Enteropathogenic Escherichia coli; Escherichia coli; Amoebiasis; Gene; Genetics","score_opus":0.011009284591797895,"score_gpt":0.31731491425025204,"score_spread":0.30630562965845415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394796460","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896205,0.008464915,0.00014512618,0.00016908749,0.00040027752,0.00029634574,0.000015653814,0.00004649339,0.0008416177],"genre_scores_gemma":[0.99922216,0.0001216439,0.00023162752,0.0001164092,0.00006307901,0.00006307762,0.000012020023,0.000015123561,0.00015488712],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99921817,0.00006025682,0.00019637332,0.00025591135,0.000094044124,0.00017522457],"domain_scores_gemma":[0.9996271,0.000058657486,0.000037387934,0.00019844402,0.000015186602,0.00006321929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000066818604,0.00014091602,0.0002288139,0.000047222118,0.00009429954,0.000013109802,0.00005278445,0.000069255526,0.00015840736],"category_scores_gemma":[0.000009159974,0.0000912224,0.00009365052,0.00011148031,0.00028251566,0.000055087523,0.00006291122,0.00011562572,0.000046012523],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016935886,0.0005336051,0.1817825,0.000056442677,0.00033960195,0.00019251028,0.0011501231,0.0000039128863,0.81106746,0.0031819798,0.0001898259,0.0013326536],"study_design_scores_gemma":[0.0014660403,0.0014752737,0.36090866,0.00012397168,0.00029953165,0.0012653649,0.0009604024,0.0024679727,0.62897587,0.00028698056,0.0015398911,0.00023006988],"about_ca_topic_score_codex":0.000107438005,"about_ca_topic_score_gemma":0.000005755561,"teacher_disagreement_score":0.18209162,"about_ca_system_score_codex":0.000047144164,"about_ca_system_score_gemma":0.00002950888,"threshold_uncertainty_score":0.37199414},"labels":[],"label_agreement":null},{"id":"W4395046812","doi":"10.24908/pocus.v9i1.16854","title":"Gas Forming Pyogenic Liver Abscess Diagnosed by Point of Care Ultrasound","year":2024,"lang":"en","type":"article","venue":"POCUS Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Sepsis; Resuscitation; Point of care ultrasound; Systemic inflammatory response syndrome; Intensive care medicine; Abscess; Point of care; Ultrasound; Surgery; Radiology; Pathology","score_opus":0.008308905401265644,"score_gpt":0.2720313544039349,"score_spread":0.2637224490026692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395046812","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97453123,0.016957166,0.000733598,0.0001463848,0.00045778096,0.00013758415,0.000024816296,0.000033382352,0.00697808],"genre_scores_gemma":[0.9974904,0.0013505553,0.00022630533,0.000039238344,0.0002142003,0.0000054526563,0.000011322994,0.000019796009,0.000642746],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993096,0.000016442158,0.00020956612,0.00010373433,0.00018377013,0.00017690996],"domain_scores_gemma":[0.9995349,0.00009597058,0.00005528707,0.00009709725,0.0001026709,0.00011407998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000092035676,0.000098967044,0.00017069132,0.000109495624,0.0001091187,0.000038645234,0.000038542454,0.000050041184,0.00076970254],"category_scores_gemma":[0.00005032953,0.000070134774,0.0001692225,0.00011946359,0.00003314433,0.0001151665,0.000010951535,0.00023434989,0.0000647961],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000671576,0.002215495,0.2574356,0.0024166498,0.0058446974,0.016674155,0.03199445,0.00006122108,0.057593666,0.0013114972,0.09204381,0.5317372],"study_design_scores_gemma":[0.031754203,0.011314149,0.1693529,0.011929271,0.009512876,0.16594157,0.024534985,0.00108175,0.3023201,0.006981127,0.2627202,0.0025568933],"about_ca_topic_score_codex":0.00008716255,"about_ca_topic_score_gemma":0.000015280482,"teacher_disagreement_score":0.5291803,"about_ca_system_score_codex":0.00016233383,"about_ca_system_score_gemma":0.00010529746,"threshold_uncertainty_score":0.84277034},"labels":[],"label_agreement":null},{"id":"W4396498572","doi":"10.1111/vcp.13354","title":"Hepatic insufficiency in two juvenile dogs with histoplasmosis","year":2024,"lang":"en","type":"article","venue":"Veterinary Clinical Pathology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Histoplasmosis; Medicine; Pathology; Pleural effusion; Peritoneal Effusion; Differential diagnosis; Portosystemic shunt; Effusion; Portal hypertension; Radiology; Gastroenterology; Surgery; Cirrhosis","score_opus":0.0557624085419856,"score_gpt":0.41073502666067196,"score_spread":0.35497261811868636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396498572","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98984647,0.00034929567,0.00027031187,0.00050072855,0.0007026116,0.00023213524,0.0000061743367,0.00011745256,0.007974835],"genre_scores_gemma":[0.996804,0.00009682364,0.0017444338,0.0003481847,0.000090978174,0.00006319302,0.000014792055,0.000022528506,0.0008150776],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99864125,0.00014706887,0.0004631449,0.00041610195,0.00009264047,0.0002397844],"domain_scores_gemma":[0.99927264,0.000290118,0.000040508166,0.00028058028,0.000024221548,0.00009195249],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033476204,0.00013926497,0.0003914693,0.0001724325,0.00004223766,0.000008771636,0.000050771294,0.00010126101,0.00023975469],"category_scores_gemma":[0.00009557932,0.00009820759,0.00011034558,0.0003057485,0.0002194491,0.000055265686,0.000051504212,0.00036384418,0.0003603498],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008117463,0.0043479637,0.88759065,0.00019717417,0.00011048653,0.05938322,0.00036468642,0.000013778791,0.00076806993,0.0009588563,0.0005208472,0.044932496],"study_design_scores_gemma":[0.006841129,0.041678727,0.8863408,0.00055532035,0.00032998872,0.017983504,0.000069971116,0.0019997577,0.00003281433,0.00065361895,0.04310221,0.0004121409],"about_ca_topic_score_codex":0.00008764691,"about_ca_topic_score_gemma":0.000039288385,"teacher_disagreement_score":0.044520356,"about_ca_system_score_codex":0.00010237987,"about_ca_system_score_gemma":0.00010713898,"threshold_uncertainty_score":0.4631688},"labels":[],"label_agreement":null},{"id":"W4398162041","doi":"10.1055/a-2306-7448","title":"Reply to Saito et al","year":2024,"lang":"fr","type":"article","venue":"Endoscopy International Open","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Medicine","score_opus":0.028028182543692413,"score_gpt":0.411762214207486,"score_spread":0.38373403166379355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398162041","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006886244,0.003026926,0.0020565784,0.42118585,0.03322458,0.0009274238,0.00030960396,0.00008816006,0.53229463],"genre_scores_gemma":[0.2736333,0.00073580316,0.010972948,0.11564316,0.0018723082,0.00028059207,0.00028247217,0.00008054502,0.5964989],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985858,0.00005830633,0.000291978,0.00045023192,0.0003399107,0.00027373672],"domain_scores_gemma":[0.9992243,0.00015977999,0.000033706452,0.0002624607,0.000110219655,0.00020954477],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00036388545,0.00018763982,0.00020240378,0.00019853679,0.000073408264,0.00048298604,0.0003575292,0.00005188944,0.015889727],"category_scores_gemma":[0.000168271,0.00016928006,0.00011211535,0.00023748785,0.00004226733,0.00049600773,0.00038834973,0.00027156653,0.016538324],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014270995,0.00034995464,0.003422219,0.00002454523,0.00098492,0.0009297218,0.0004827403,0.00005322305,0.00037578863,0.093105085,0.878369,0.021760104],"study_design_scores_gemma":[0.00085774,0.0003695981,0.0022087712,0.0012944168,0.000092441034,0.00024422622,0.00008434661,0.00075366476,0.0012197557,0.0006815936,0.9920571,0.00013633755],"about_ca_topic_score_codex":0.004368839,"about_ca_topic_score_gemma":0.000070754344,"teacher_disagreement_score":0.30554268,"about_ca_system_score_codex":0.00063944573,"about_ca_system_score_gemma":0.0003637315,"threshold_uncertainty_score":0.9850099},"labels":[],"label_agreement":null},{"id":"W4400903303","doi":"10.1513/annalsats.202405-458le","title":"Reply: Specialists in Chronic Respiratory Failure Should Serve More Than Just Ventilator-Dependent Patients","year":2024,"lang":"en","type":"letter","venue":"Annals of the American Thoracic Society","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Medicine; MEDLINE","score_opus":0.11134555898131329,"score_gpt":0.40963239941042684,"score_spread":0.2982868404291136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400903303","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5848315,0.0016232862,0.0000034131685,0.40977466,0.000997979,0.0013830928,0.000462898,0.00012461779,0.0007986029],"genre_scores_gemma":[0.2797584,0.0004947261,0.00013293642,0.70964926,0.0041544484,0.00016432081,0.0003398401,0.000242824,0.005063245],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967664,0.00020691841,0.00068545865,0.00074408104,0.0009801189,0.000617046],"domain_scores_gemma":[0.9973483,0.00007910805,0.00084022543,0.0013599548,0.00027905265,0.00009336006],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000353376,0.0005313061,0.0010290908,0.00015219537,0.00013761134,0.000039317838,0.00039706932,0.00042206034,0.00009749765],"category_scores_gemma":[0.00006654284,0.000378639,0.0014370813,0.0009786624,0.0006557464,0.000083691746,0.00032749653,0.0021751903,0.000069119385],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005983685,0.00017855594,0.045887537,0.00067730364,0.00091542973,0.00014417247,0.00054448063,0.000009514477,0.000021002954,0.0000021454466,0.94832456,0.0032354326],"study_design_scores_gemma":[0.00060968805,0.0006625611,0.095503286,0.0016144032,0.0007749893,0.000022657432,0.00045504933,0.000024974725,0.0010655624,0.000089527486,0.8986876,0.0004896934],"about_ca_topic_score_codex":0.0010013465,"about_ca_topic_score_gemma":0.0000858906,"teacher_disagreement_score":0.30507305,"about_ca_system_score_codex":0.0007274355,"about_ca_system_score_gemma":0.00059430295,"threshold_uncertainty_score":0.99986655},"labels":[],"label_agreement":null},{"id":"W4401277937","doi":"10.1080/21645515.2024.2374147","title":"Immunogenicity and safety of an <i>Entamoeba histolytica</i> adjuvanted protein vaccine candidate (LecA+GLA-3M-052 liposomes) in rhesus macaques","year":2024,"lang":"en","type":"article","venue":"Human Vaccines & Immunotherapeutics","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Immunogenicity; Adjuvant; Entamoeba histolytica; Avidity; Immunization; Immunology; Antigen; Immune system; Antibody; Virology; Biology; Peripheral blood mononuclear cell; Microbiology; Medicine","score_opus":0.01138540984379233,"score_gpt":0.2913056655705974,"score_spread":0.27992025572680507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401277937","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98265177,0.014373993,0.00008643099,0.00031770318,0.00020436005,0.0011936014,0.000051257633,0.00020321006,0.000917647],"genre_scores_gemma":[0.9959654,0.0011888123,0.0003976502,0.00019627533,0.00010354059,0.00006699594,0.00015592508,0.000105270294,0.0018201373],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977651,0.00011249395,0.00088598975,0.00052887364,0.0002495256,0.00045797482],"domain_scores_gemma":[0.99882495,0.00006456529,0.00016081348,0.000692256,0.00014453997,0.00011287157],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00028098907,0.00044197842,0.0007469666,0.00045776615,0.00019397869,0.000059756785,0.0001612116,0.00020323746,0.0003860142],"category_scores_gemma":[0.000015714466,0.0003727398,0.00016940548,0.0005324637,0.000077128905,0.00025645274,0.00008263084,0.00042541182,0.000018817302],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009293243,0.005003331,0.13484536,0.0023244238,0.005084971,0.00088971417,0.005587991,0.000018952564,0.689949,0.0076102596,0.00031388618,0.13907889],"study_design_scores_gemma":[0.043045368,0.007764055,0.7217029,0.0052149543,0.0030629646,0.0017872658,0.0009441593,0.0044648363,0.14817306,0.0030067516,0.058526125,0.0023076073],"about_ca_topic_score_codex":0.0016215763,"about_ca_topic_score_gemma":0.0007694806,"teacher_disagreement_score":0.5868575,"about_ca_system_score_codex":0.00031691662,"about_ca_system_score_gemma":0.00015766252,"threshold_uncertainty_score":0.99987245},"labels":[],"label_agreement":null},{"id":"W4402358730","doi":"10.1002/uog.28256","title":"EP07.07: Congenital portosystemic fistulas: a case series","year":2024,"lang":"en","type":"article","venue":"Ultrasound in Obstetrics and Gynecology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Series (stratigraphy); Medicine; Geology; Paleontology","score_opus":0.010872867348317551,"score_gpt":0.26072489467531884,"score_spread":0.2498520273270013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402358730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98241484,0.006374413,0.00002485415,0.00014452345,0.0019106638,0.0003079311,0.000043331038,0.00007098721,0.008708432],"genre_scores_gemma":[0.99444485,0.0014689565,0.00014406508,0.00009100998,0.000055928456,0.000046992634,0.00003871072,0.000019290292,0.00369022],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99906206,0.000034266333,0.00027198246,0.00029635354,0.00007937712,0.00025597052],"domain_scores_gemma":[0.99229014,0.0073694107,0.000029347742,0.0001597241,0.000051737774,0.00009962421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012511127,0.0001456566,0.00027471525,0.0003135784,0.000094307805,0.000049304155,0.000024762812,0.00016937443,0.000390494],"category_scores_gemma":[0.005175829,0.0001242158,0.000060152306,0.00046448153,0.00010212197,0.000100478406,0.000023412804,0.00021091146,0.000107568165],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079409394,0.0011246226,0.6768936,0.0009158335,0.0009811831,0.1985567,0.0029554234,0.000010954744,0.00078679563,0.016071172,0.0029147312,0.09870958],"study_design_scores_gemma":[0.0054391366,0.0028877507,0.046531938,0.00020248214,0.0007420681,0.4330201,0.0047314083,0.0005301954,0.00017652776,0.0022750227,0.50273633,0.0007270082],"about_ca_topic_score_codex":0.00014071543,"about_ca_topic_score_gemma":0.00024279341,"teacher_disagreement_score":0.6303617,"about_ca_system_score_codex":0.00019332592,"about_ca_system_score_gemma":0.00010516958,"threshold_uncertainty_score":0.6196325},"labels":[],"label_agreement":null},{"id":"W4402752981","doi":"10.1503/cmaj.231816","title":"Amoebic colitis in a 39-year-old man with HIV","year":2024,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Colitis; Human immunodeficiency virus (HIV); Medicine; World Wide Web; Computer science; Data science; Immunology","score_opus":0.0045733394564865006,"score_gpt":0.23041861606066194,"score_spread":0.22584527660417544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402752981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87500167,0.00036840411,0.000094436706,0.06212225,0.0009797002,0.0003016499,0.000047335805,0.000093029266,0.06099153],"genre_scores_gemma":[0.9837555,0.00009198599,0.00015043144,0.0036606046,0.00086618244,0.000014502612,0.00001759584,0.00002109962,0.011422087],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984776,0.00005807291,0.00024238025,0.00013900422,0.0006949439,0.00038802798],"domain_scores_gemma":[0.99860287,0.00007246819,0.00004376668,0.000070686896,0.00012320287,0.0010870084],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005338003,0.000097646414,0.00018202413,0.0003465016,0.0001144926,0.00008308629,0.00004794282,0.0002120689,0.0053636367],"category_scores_gemma":[0.0002663259,0.000074462674,0.00006529052,0.00039866546,0.000028577517,0.0000927715,0.0000049693863,0.0008073859,0.00048034245],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027773189,0.0000773821,0.814726,0.000030965657,0.00033846629,0.013498732,0.00036002084,0.0000023104215,0.0000011431661,0.0016473725,0.15520445,0.014085379],"study_design_scores_gemma":[0.002540072,0.000227817,0.55685616,0.0007290275,0.00010028755,0.0040799254,0.00037302554,0.00063783216,0.0000037253867,0.00024058894,0.43406352,0.0001480159],"about_ca_topic_score_codex":0.005963012,"about_ca_topic_score_gemma":0.060951628,"teacher_disagreement_score":0.27885908,"about_ca_system_score_codex":0.0022621178,"about_ca_system_score_gemma":0.0030138702,"threshold_uncertainty_score":0.99554557},"labels":[],"label_agreement":null},{"id":"W4402871406","doi":"10.1186/s12964-024-01822-4","title":"Parasite-enhanced immunotherapy: transforming the “cold” tumors to “hot” battlefields","year":2024,"lang":"en","type":"review","venue":"Cell Communication and Signaling","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Anhui University of Chinese Medicine; Anhui University","keywords":"Immunotherapy; Medicine; Immunology; Parasite hosting; Immune system; Computer science; World Wide Web","score_opus":0.03742912947226256,"score_gpt":0.3485241254124369,"score_spread":0.3110949959401743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402871406","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002839817,0.98787385,0.0010821354,0.00017277992,0.00008105664,0.0010818938,0.000006759739,0.00006890331,0.00934864],"genre_scores_gemma":[0.019188339,0.9771144,0.00045772738,0.00023910648,0.000050558283,0.00027681774,0.000068378395,0.00005204303,0.0025526353],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989063,0.00013446607,0.0004316029,0.00023054413,0.00012220269,0.00017486454],"domain_scores_gemma":[0.9987821,0.00025049568,0.00010480001,0.0007360931,0.000046430676,0.00008009899],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031521815,0.00027513396,0.000677578,0.00014962602,0.00036382413,0.000086733075,0.00020099827,0.00016682173,0.000121171346],"category_scores_gemma":[0.000011427494,0.00016490281,0.00028884393,0.0003244746,0.000054487842,0.000038389357,0.000059002665,0.00057625334,0.00013473546],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002277065,0.00012974348,0.0000036770937,0.0050552413,0.00044271728,0.00000889685,0.0021976123,0.00000404011,0.00028045342,0.00078257336,0.00034322377,0.99072903],"study_design_scores_gemma":[0.00028032315,0.00009936645,0.0000017796708,0.009259805,0.0012213114,0.000051864015,0.00022749719,0.00001660379,0.00028890307,0.000051018495,0.988298,0.0002035116],"about_ca_topic_score_codex":0.00004277758,"about_ca_topic_score_gemma":0.000005662459,"teacher_disagreement_score":0.99052554,"about_ca_system_score_codex":0.00008479249,"about_ca_system_score_gemma":0.00012241307,"threshold_uncertainty_score":0.6724542},"labels":[],"label_agreement":null},{"id":"W4403083949","doi":"10.1002/mdc3.14204","title":"In Memoriam Kapil Sethi, M.D. (1953–2024)","year":2024,"lang":"en","type":"article","venue":"Movement Disorders Clinical Practice","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Toronto Western Hospital","funders":"","keywords":"Philosophy; Materials science","score_opus":0.034095818692361224,"score_gpt":0.44312492498108763,"score_spread":0.4090291062887264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403083949","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07927076,0.008169397,0.0030816516,0.22935745,0.03764428,0.0030339253,0.000034073884,0.00059816317,0.6388103],"genre_scores_gemma":[0.8054742,0.008959581,0.0069734193,0.10406864,0.0029914386,0.00036328795,0.00009185431,0.0001565145,0.07092102],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978931,0.00018565747,0.00072684605,0.00051916705,0.0003653344,0.00030988862],"domain_scores_gemma":[0.9976367,0.0016896757,0.00008841264,0.0003761406,0.000060645267,0.00014847438],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0013953029,0.00019353218,0.00033083052,0.00015551638,0.00007345552,0.000059758127,0.00006951818,0.000174619,0.0023910247],"category_scores_gemma":[0.0020333827,0.00015943238,0.00021518054,0.00048483795,0.00009063763,0.00048725164,0.00007253022,0.000806838,0.0012471646],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014578897,0.014728948,0.08794001,0.0004573449,0.0023974308,0.0026448714,0.0008529744,0.000055223252,0.000045649354,0.01831079,0.73597044,0.13513842],"study_design_scores_gemma":[0.0027877649,0.0009968433,0.013644583,0.00013776938,0.00044161626,0.000013122215,0.00060687045,0.0008576265,0.000010138835,0.012765756,0.9675364,0.0002015479],"about_ca_topic_score_codex":0.00041697826,"about_ca_topic_score_gemma":0.00011398704,"teacher_disagreement_score":0.7262035,"about_ca_system_score_codex":0.00014650723,"about_ca_system_score_gemma":0.0001876804,"threshold_uncertainty_score":0.9995305},"labels":[],"label_agreement":null},{"id":"W4403532963","doi":"10.1007/978-1-0716-3898-9_12","title":"Correction to: Experimental Intraperitoneal Infection of Piglets","year":2024,"lang":"en","type":"erratum","venue":"Methods in molecular biology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Université de Montréal","funders":"","keywords":"Medicine","score_opus":0.019175106214098566,"score_gpt":0.43951255182813154,"score_spread":0.42033744561403297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403532963","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018529184,0.010041763,0.5893542,0.00033645114,0.2564487,0.0022187096,0.000047526428,0.0002505205,0.12277297],"genre_scores_gemma":[0.042888053,0.0010234688,0.8195726,0.0011460251,0.0028877805,0.0012332901,0.001344205,0.00037045218,0.12953408],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981941,0.00048049094,0.00044454602,0.0005190982,0.000099012046,0.00026273404],"domain_scores_gemma":[0.99933153,0.00007477837,0.000106480664,0.00033449134,0.00007209174,0.00008064322],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00039417375,0.00029660438,0.0006908282,0.00074989104,0.000029459528,0.000007895648,0.00005745752,0.0006629118,0.00017018228],"category_scores_gemma":[0.00030160634,0.00026416976,0.00024693893,0.0005339881,0.00010583805,0.000013418893,0.00010414145,0.0008881985,0.000041119303],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029734347,0.001353949,0.004540247,0.00046863922,0.0010817958,0.00046148794,0.0005114325,0.00002789826,0.6839909,0.0008124949,0.22164753,0.084806286],"study_design_scores_gemma":[0.0015161989,0.0060629114,0.00299844,0.0014553184,0.0006808682,0.0008655983,0.00008608294,0.00084588275,0.41076452,0.0010852234,0.57291883,0.0007201172],"about_ca_topic_score_codex":0.0011339979,"about_ca_topic_score_gemma":0.000052379088,"teacher_disagreement_score":0.35127133,"about_ca_system_score_codex":0.0003483943,"about_ca_system_score_gemma":0.00019277766,"threshold_uncertainty_score":0.99998105},"labels":[],"label_agreement":null},{"id":"W4404198897","doi":"10.1093/ptj/pzae162","title":"Author Response to Kumar et al","year":2024,"lang":"en","type":"article","venue":"Physical Therapy","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Health Sciences; Population Health Research Institute","funders":"","keywords":"Psychology","score_opus":0.04358309386561282,"score_gpt":0.41461076289139737,"score_spread":0.37102766902578455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404198897","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94563794,0.000100278514,0.0003725618,0.050682377,0.00017931307,0.00020777433,0.0000069488524,0.00015044064,0.0026623767],"genre_scores_gemma":[0.9862554,0.000012912446,0.00020463296,0.0060048406,0.00014423713,0.000047315883,0.0000041459457,0.000020032694,0.0073064547],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99949396,0.000047461588,0.000054855398,0.00016480086,0.00012153676,0.00011736393],"domain_scores_gemma":[0.9996149,0.000114718736,0.000004767076,0.00015406964,0.000019007311,0.000092546405],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011023134,0.00008264374,0.00011831793,0.000052923875,0.000035148045,0.000021835995,0.000022330134,0.000016103848,0.00012920672],"category_scores_gemma":[0.000018434577,0.000054081273,0.00009960173,0.00019292919,0.000017559587,0.000036486203,0.000009758115,0.000102531565,0.0009876398],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009645141,0.0035460223,0.0018789275,0.000028602828,0.0011974561,0.00061371457,0.0061966055,0.00002024302,0.26859313,0.027501179,0.26246116,0.41831782],"study_design_scores_gemma":[0.000755916,0.0013496731,0.021588877,0.000050178867,0.000020306512,0.000017453258,0.000018089251,0.000407886,0.0059444844,0.0018322121,0.96792525,0.000089681955],"about_ca_topic_score_codex":0.000014674182,"about_ca_topic_score_gemma":2.307872e-7,"teacher_disagreement_score":0.7054641,"about_ca_system_score_codex":0.000043987526,"about_ca_system_score_gemma":0.000048709844,"threshold_uncertainty_score":0.9997902},"labels":[],"label_agreement":null},{"id":"W4404962311","doi":"10.3889/oamjms.2024.11892","title":"Pyogenic Abscess Liver Secondary to Perforated Appendicitis","year":2024,"lang":"en","type":"article","venue":"Open Access Macedonian Journal of Medical Sciences","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"","keywords":"Medicine; Pyogenic liver abscess; Abscess; Liver abscess; Percutaneous; Surgery; Abdomen; Appendicitis; Abdominal pain; Ceftriaxone; Antibiotics","score_opus":0.09924715466416197,"score_gpt":0.4633536601522266,"score_spread":0.36410650548806467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404962311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91540664,0.0029046484,0.0013021765,0.035080273,0.0018539244,0.0005175771,0.000011227685,0.000035170367,0.04288836],"genre_scores_gemma":[0.9959437,0.0005260215,0.00068892335,0.0012067802,0.00036015667,0.000008931774,0.0000018607764,0.000012947736,0.0012506305],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974412,0.00007024484,0.00047029235,0.00028763348,0.0014088008,0.00032183118],"domain_scores_gemma":[0.99873483,0.000115160256,0.00012418606,0.00012709077,0.000114468115,0.0007842368],"candidate_categories":["scholarly_communication","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0019808763,0.00014602789,0.00036057763,0.00038852534,0.00029176864,0.0013592183,0.0016303648,0.00009865346,0.020030607],"category_scores_gemma":[0.00021763433,0.00008853189,0.00011862034,0.001271948,0.00030816498,0.0013677151,0.00054584385,0.00049021264,0.00029459057],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002476664,0.00058151514,0.062051695,0.0002681066,0.0006197277,0.015133781,0.0008052043,0.000067844616,0.00015314594,0.0024515383,0.062173534,0.8554462],"study_design_scores_gemma":[0.010647588,0.010445553,0.30602342,0.013430528,0.0012527464,0.051128365,0.0019241931,0.012128645,0.0051303618,0.003606911,0.5829121,0.0013696037],"about_ca_topic_score_codex":0.0003879535,"about_ca_topic_score_gemma":0.00010685968,"teacher_disagreement_score":0.8540766,"about_ca_system_score_codex":0.000114182156,"about_ca_system_score_gemma":0.0021234152,"threshold_uncertainty_score":0.9996775},"labels":[],"label_agreement":null},{"id":"W4405352072","doi":"10.5194/egusphere-2024-1796-ac2","title":"Author response to RC2","year":2024,"lang":"en","type":"peer-review","venue":"","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; Environment and Climate Change Canada","funders":"","keywords":"Computer science","score_opus":0.057841271822168014,"score_gpt":0.41639810427071733,"score_spread":0.3585568324485493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405352072","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012826995,0.021294022,0.000101286605,0.7347503,0.005291953,0.0014679364,0.0002476384,0.00033984822,0.23637879],"genre_scores_gemma":[0.00020389634,0.00026815032,0.000819161,0.012516437,0.00044486905,0.00019770623,0.00027766294,0.00005670173,0.9852154],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.998806,0.000049772963,0.00025764658,0.00038506178,0.00029365497,0.0002078491],"domain_scores_gemma":[0.9989848,0.00007850894,0.000030343264,0.00053735333,0.00014648304,0.00022252223],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003824299,0.00024896328,0.0005444702,0.00026107742,0.000040807572,0.000018160827,0.00005377224,0.00019708708,0.011038584],"category_scores_gemma":[0.00035580975,0.00016164628,0.0002625388,0.00035240926,0.000015834978,0.000011466878,0.00007892984,0.0003383463,0.018425332],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011242121,0.000073598785,0.000008389351,0.0015468322,0.00024848868,0.0003581503,0.000014802294,3.4312688e-8,0.0000040906048,0.0000693472,0.990461,0.007102848],"study_design_scores_gemma":[0.00019852768,0.00040681488,0.00020074802,0.006330504,0.0011233567,0.00021949863,0.000004765312,0.0000014400658,0.000011856523,0.00003482535,0.99132586,0.00014180115],"about_ca_topic_score_codex":0.00017916766,"about_ca_topic_score_gemma":0.00004273097,"teacher_disagreement_score":0.74883664,"about_ca_system_score_codex":0.0002374674,"about_ca_system_score_gemma":0.00039710992,"threshold_uncertainty_score":0.9898655},"labels":[],"label_agreement":null},{"id":"W4406426930","doi":"10.1016/s1166-8598(19)64843-x","title":"10.1016/s1166-8598(19)64843-x","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Psychology","score_opus":0.006035069666753729,"score_gpt":0.20094601505042925,"score_spread":0.1949109453836755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406426930","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003371584,0.000046356443,0.0000014686759,0.0003935693,0.0000018973332,0.00025724288,0.000009391435,0.000132459,0.995786],"genre_scores_gemma":[0.001965318,4.5501073e-7,0.00018293018,0.00011600962,0.00015057709,0.000031937507,0.000031970605,0.000022009895,0.9974988],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993327,0.000015078551,0.0001278454,0.00018184725,0.0001304057,0.0002121119],"domain_scores_gemma":[0.9994471,0.000021707056,0.000015656944,0.0002732543,0.000036871308,0.00020539256],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000053364583,0.000118859985,0.00017027659,0.00007545302,0.000090017835,0.000011985406,0.000043148295,0.000058565714,0.9984111],"category_scores_gemma":[0.000022524773,0.000097162774,0.00007335223,0.00017419916,0.00002517261,0.000041980882,0.000014962491,0.00008549494,0.99692494],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015529248,0.0002689054,0.000010283966,0.000007997502,0.00009029973,0.000059893962,0.000018357596,0.000010976659,0.000016891432,0.000001595205,0.3580767,0.6412828],"study_design_scores_gemma":[0.0008250431,0.0004053737,0.00059389294,0.000021340738,0.00008386479,0.00009693902,9.3668586e-7,0.000046966205,0.00006051232,0.0000072604985,0.99776274,0.000095103205],"about_ca_topic_score_codex":0.00007015292,"about_ca_topic_score_gemma":2.0909143e-7,"teacher_disagreement_score":0.6411877,"about_ca_system_score_codex":0.00007473302,"about_ca_system_score_gemma":0.000041333362,"threshold_uncertainty_score":0.3962183},"labels":[],"label_agreement":null},{"id":"W4406443431","doi":"10.1016/s0246-0610(95)33326-9","title":"10.1016/s0246-0610(95)33326-9","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Philosophy","score_opus":0.005971460931911277,"score_gpt":0.20039410669340113,"score_spread":0.19442264576148985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406443431","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0020007892,0.00006662396,0.0000010661984,0.0002907779,0.0000018855401,0.0002536552,0.000009291594,0.00012899864,0.9972469],"genre_scores_gemma":[0.0017063397,7.577893e-7,0.00015917768,0.0000699511,0.00015162877,0.00003138627,0.000031689724,0.000022945773,0.9978261],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993202,0.000014417708,0.00012798276,0.00018221395,0.00013649474,0.0002186607],"domain_scores_gemma":[0.9994759,0.000020470185,0.000015432692,0.0002746705,0.00004189221,0.00017164115],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00005470767,0.000119188124,0.00017166979,0.000059527963,0.000083392115,0.000013064898,0.000044165507,0.00005745082,0.99856544],"category_scores_gemma":[0.000019437162,0.00009790247,0.000072623814,0.00018011215,0.000024989688,0.000045166154,0.000015388456,0.00008835485,0.9976683],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011127485,0.0002219693,0.0000057237366,0.0000060015336,0.00007551131,0.000042686035,0.000013232666,0.0000068682834,0.000019576768,5.591675e-7,0.6426418,0.3568548],"study_design_scores_gemma":[0.0007751,0.00043312876,0.0004283706,0.000027949289,0.00008150719,0.00008256379,9.326484e-7,0.00006238223,0.00008142312,0.000006412945,0.99792546,0.00009474582],"about_ca_topic_score_codex":0.00006404352,"about_ca_topic_score_gemma":2.0261396e-7,"teacher_disagreement_score":0.35676005,"about_ca_system_score_codex":0.00006788866,"about_ca_system_score_gemma":0.00003715313,"threshold_uncertainty_score":0.39923468},"labels":[],"label_agreement":null},{"id":"W4406451390","doi":"10.1016/s1166-8598(22)26077-3","title":"10.1016/s1166-8598(22)26077-3","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Computer science","score_opus":0.0049678659935142805,"score_gpt":0.19496222447466774,"score_spread":0.18999435848115345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406451390","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0038174076,0.000043671607,0.0000012024606,0.00026648262,0.000002001365,0.00025194883,0.000013403572,0.0001301499,0.99547374],"genre_scores_gemma":[0.0018479073,4.4703705e-7,0.00016948882,0.000076212025,0.00015159893,0.000030749354,0.000037587564,0.00002284927,0.99766314],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99932975,0.00001442477,0.00012859583,0.00018112728,0.000132678,0.0002134354],"domain_scores_gemma":[0.9994813,0.000020061361,0.000015999085,0.0002748921,0.000041147534,0.0001665865],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00005074443,0.00012040045,0.00017416316,0.00007337953,0.000084199804,0.000012040608,0.000043766624,0.000058133694,0.99871856],"category_scores_gemma":[0.00001809649,0.000099225115,0.00007320229,0.00017733694,0.000024793726,0.00004345542,0.0000149825955,0.00008507007,0.9971078],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014433081,0.00028782125,0.000009297985,0.000007134741,0.00009215713,0.000053439966,0.000014201566,0.000010460539,0.000022218625,0.0000015370256,0.29112756,0.70822984],"study_design_scores_gemma":[0.00081204774,0.0004366579,0.00073263457,0.000025431593,0.00008620413,0.00008587122,8.4193516e-7,0.000051111787,0.00008487992,0.000005910516,0.9975821,0.000096355216],"about_ca_topic_score_codex":0.000045733057,"about_ca_topic_score_gemma":1.465928e-7,"teacher_disagreement_score":0.7081335,"about_ca_system_score_codex":0.00006630383,"about_ca_system_score_gemma":0.000035301444,"threshold_uncertainty_score":0.40462828},"labels":[],"label_agreement":null},{"id":"W4406478884","doi":"10.1016/s0246-0424(96)40558-1","title":"10.1016/s0246-0424(96)40558-1","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.005983107217532898,"score_gpt":0.20037840695757622,"score_spread":0.19439529974004333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406478884","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022059102,0.000042458818,0.0000014228572,0.00034910438,0.0000018189951,0.00025216638,0.000008866512,0.00012668026,0.99701154],"genre_scores_gemma":[0.0021634917,4.6366986e-7,0.00016797488,0.00007410846,0.00014820983,0.0000313663,0.000030819116,0.000022820499,0.99736077],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993226,0.000014315223,0.00012674143,0.00018053943,0.0001353577,0.00022043283],"domain_scores_gemma":[0.99948555,0.000020259766,0.000014868244,0.00026794098,0.00004228562,0.00016911978],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000053540763,0.00011713004,0.00017077518,0.00007625828,0.00008579495,0.00001271054,0.000043687327,0.00005816058,0.99856097],"category_scores_gemma":[0.000019572488,0.00009720657,0.00007240761,0.00018887412,0.000024309162,0.00004416944,0.000014969448,0.00008922528,0.99751025],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012009117,0.00023837283,0.0000078195435,0.0000064145,0.00008395169,0.00004631679,0.000015054568,0.0000072769835,0.000023352695,6.1532876e-7,0.6164737,0.38297704],"study_design_scores_gemma":[0.00077274686,0.00044720582,0.0004897152,0.000027635484,0.00008508974,0.0000788264,8.787386e-7,0.000047791404,0.0001294995,0.0000063999787,0.99782026,0.00009395646],"about_ca_topic_score_codex":0.000055564688,"about_ca_topic_score_gemma":1.892761e-7,"teacher_disagreement_score":0.3828831,"about_ca_system_score_codex":0.00007110471,"about_ca_system_score_gemma":0.000038823902,"threshold_uncertainty_score":0.39639688},"labels":[],"label_agreement":null},{"id":"W4406548825","doi":"10.1016/s1155-1976(97)07854-6","title":"10.1016/s1155-1976(97)07854-6","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.006447809073115949,"score_gpt":0.19661486421199378,"score_spread":0.19016705513887783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406548825","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0036900404,0.00004528762,0.0000012037384,0.0002850853,0.000002066174,0.0002557536,0.000008950734,0.00012811543,0.9955835],"genre_scores_gemma":[0.0021525791,4.1302047e-7,0.00015700205,0.00007827857,0.0001517547,0.000031069005,0.00003229706,0.000022270726,0.99737436],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99933517,0.000014408071,0.00012807206,0.00018049228,0.00012814954,0.00021370567],"domain_scores_gemma":[0.99948835,0.000020236237,0.000015987533,0.0002736605,0.000036692898,0.00016506076],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0000515168,0.00011969761,0.0001735047,0.00007462985,0.000085276064,0.000012283064,0.000043485914,0.000058279977,0.99851185],"category_scores_gemma":[0.000016773203,0.00009893314,0.00007331117,0.00016257113,0.000024691259,0.000044659217,0.000014859458,0.00008480081,0.99816936],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017261821,0.00031552833,0.0000104229375,0.000008174842,0.00010578631,0.00006172877,0.000022099677,0.0000145759805,0.000016826454,0.0000010986453,0.2034409,0.79583025],"study_design_scores_gemma":[0.0008298039,0.0004190054,0.0004955008,0.000025689407,0.000085280226,0.00007827246,0.0000011210034,0.000047964368,0.00009406485,0.0000051944376,0.99782205,0.00009606521],"about_ca_topic_score_codex":0.000062104045,"about_ca_topic_score_gemma":2.0204222e-7,"teacher_disagreement_score":0.79573417,"about_ca_system_score_codex":0.00006577828,"about_ca_system_score_gemma":0.000035411143,"threshold_uncertainty_score":0.4034376},"labels":[],"label_agreement":null},{"id":"W4406564307","doi":"10.1016/j.abdp.2024.11.006","title":"10.1016/j.abdp.2024.11.006","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.005419221543849736,"score_gpt":0.20031725492172867,"score_spread":0.19489803337787892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406564307","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0048133433,0.000034649234,0.0000010388109,0.00030042947,0.0000027835058,0.00023079904,0.000009911556,0.000108797605,0.99449825],"genre_scores_gemma":[0.0017812983,2.954957e-7,0.00013296325,0.00006395099,0.00015967987,0.000028114891,0.000026714328,0.000020886433,0.9977861],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993886,0.000012325645,0.000117651056,0.00016732462,0.00012037575,0.0001937269],"domain_scores_gemma":[0.99954116,0.000018190192,0.000013756833,0.00024636,0.00003522992,0.0001452713],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00004211145,0.000109845256,0.00015811977,0.000070662696,0.00007369115,0.000011691867,0.00003813748,0.000050991028,0.99871147],"category_scores_gemma":[0.00001425,0.0000901436,0.00006927445,0.00018079323,0.000021130993,0.000038707072,0.000014012249,0.000070121394,0.9961445],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009772196,0.00026925793,0.00002016278,0.0000077077,0.00007936626,0.000053122134,0.000014153963,0.000010748354,0.000017128443,0.0000015807094,0.4566779,0.54275113],"study_design_scores_gemma":[0.0006787288,0.00032701847,0.0006199359,0.000024887288,0.00008741808,0.000075738346,9.1841935e-7,0.00005053123,0.000066855646,0.0000046107743,0.99797636,0.00008696813],"about_ca_topic_score_codex":0.0000871727,"about_ca_topic_score_gemma":4.862837e-7,"teacher_disagreement_score":0.5426642,"about_ca_system_score_codex":0.000060559123,"about_ca_system_score_gemma":0.000033004275,"threshold_uncertainty_score":0.36759493},"labels":[],"label_agreement":null},{"id":"W4406565904","doi":"10.1016/s9999-9005(11)54644-6","title":"10.1016/s9999-9005(11)54644-6","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Environmental science","score_opus":0.005050289809064009,"score_gpt":0.19403396423535588,"score_spread":0.18898367442629188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406565904","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0063372334,0.0000355633,0.0000015086348,0.00037540728,0.000002057938,0.0002522616,0.000009858039,0.00013194996,0.9928542],"genre_scores_gemma":[0.0031123569,3.5262548e-7,0.00018163258,0.00007502877,0.00016188226,0.00003056753,0.000032222804,0.00002311339,0.99638283],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99932075,0.000014398559,0.00013025424,0.00018271815,0.00013302223,0.00021885529],"domain_scores_gemma":[0.9994798,0.0000197665,0.000016233422,0.0002762017,0.00004031437,0.00016772276],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00005062311,0.000121828954,0.00017589936,0.00007295691,0.00008498658,0.000012363709,0.000044476074,0.000058804842,0.9983039],"category_scores_gemma":[0.000017062375,0.00010047058,0.00007405179,0.00017856913,0.000024597768,0.000046377576,0.000014594219,0.00007414425,0.9964016],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012268631,0.0003385015,0.000015324467,0.000008306727,0.000089994355,0.000062226216,0.000018627732,0.00001226392,0.000025452373,0.0000026981402,0.31185126,0.6874527],"study_design_scores_gemma":[0.00080417085,0.00035174427,0.00062664907,0.000025580688,0.00008539317,0.00007991175,9.5169844e-7,0.00006424623,0.00009561519,0.0000047882318,0.99776363,0.000097321485],"about_ca_topic_score_codex":0.00007537383,"about_ca_topic_score_gemma":4.3265408e-7,"teacher_disagreement_score":0.68735534,"about_ca_system_score_codex":0.0000672175,"about_ca_system_score_gemma":0.00003525413,"threshold_uncertainty_score":0.40970713},"labels":[],"label_agreement":null},{"id":"W4406568668","doi":"10.1016/s1634-6939(20)30775-4","title":"10.1016/s1634-6939(20)30775-4","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Psychology; Humanities; Philosophy","score_opus":0.005002227474446869,"score_gpt":0.19321672257987071,"score_spread":0.18821449510542385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406568668","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0029447202,0.000041842148,0.000001222594,0.00034685648,0.0000019545705,0.00033655667,0.00001134345,0.00013059737,0.9961849],"genre_scores_gemma":[0.0014654732,3.4987255e-7,0.00016043373,0.00007619654,0.0001565611,0.00004771134,0.000039075938,0.000022856422,0.9980313],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999329,0.000014142255,0.00012878247,0.00018119079,0.00013052997,0.00021637793],"domain_scores_gemma":[0.99948126,0.000019292867,0.000016014847,0.00027523268,0.000040560557,0.00016764321],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000050588245,0.00012046223,0.0001742939,0.000073966934,0.000084788,0.000012273299,0.000043806413,0.0000582614,0.9983361],"category_scores_gemma":[0.000015582204,0.00009925549,0.000071734365,0.00018215615,0.000025190991,0.000044911547,0.000014854834,0.000082404615,0.9969919],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014097193,0.0002746518,0.0000077752775,0.0000069829866,0.000092454546,0.000054812506,0.000014281269,0.000010983005,0.00003006355,0.0000010235414,0.29779363,0.70157236],"study_design_scores_gemma":[0.00081045413,0.00042902248,0.00038635032,0.00002551871,0.00008801955,0.00008864652,7.925383e-7,0.000053302076,0.00009779012,0.000005336224,0.99791867,0.000096102805],"about_ca_topic_score_codex":0.000044016226,"about_ca_topic_score_gemma":2.5452823e-7,"teacher_disagreement_score":0.7014763,"about_ca_system_score_codex":0.0000663967,"about_ca_system_score_gemma":0.000036824764,"threshold_uncertainty_score":0.40475214},"labels":[],"label_agreement":null},{"id":"W4406583064","doi":"10.1016/s1155-1976(20)30002-4","title":"10.1016/s1155-1976(20)30002-4","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.00523517926770308,"score_gpt":0.19427925431391374,"score_spread":0.18904407504621065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406583064","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0031953843,0.000044394234,0.0000013319437,0.00033479522,0.0000019327747,0.00027268633,0.000012176385,0.00013256144,0.99600476],"genre_scores_gemma":[0.0018032371,3.794032e-7,0.0001446918,0.00007837237,0.00015325406,0.000032165724,0.00003797543,0.000022914179,0.99772704],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993261,0.0000146122275,0.00012948277,0.00018257929,0.00012970308,0.00021753732],"domain_scores_gemma":[0.9994806,0.000021013677,0.000016082213,0.00027717196,0.000036865513,0.00016825559],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000050555376,0.0001211827,0.00018163025,0.0000753874,0.000086342465,0.000012434744,0.000044308792,0.000059085218,0.9986807],"category_scores_gemma":[0.000015175941,0.000100307356,0.000074125135,0.00016421135,0.000025049685,0.000045234756,0.000014659594,0.00008561772,0.9972614],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020169003,0.00036026147,0.000012599586,0.000008862379,0.00012453196,0.00006792987,0.000019945817,0.000020107698,0.000030507459,0.0000012005987,0.35948047,0.63967186],"study_design_scores_gemma":[0.0008643631,0.0004110369,0.00049640005,0.000025393056,0.00009527919,0.00008986683,8.0694963e-7,0.00005378991,0.0000855831,0.00000488739,0.99777544,0.000097173055],"about_ca_topic_score_codex":0.000045033346,"about_ca_topic_score_gemma":2.4960323e-7,"teacher_disagreement_score":0.6395747,"about_ca_system_score_codex":0.00006783711,"about_ca_system_score_gemma":0.000036292804,"threshold_uncertainty_score":0.40904152},"labels":[],"label_agreement":null},{"id":"W4406643209","doi":"10.1016/b978-2-294-76306-9.50459-2","title":"10.1016/b978-2-294-76306-9.50459-2","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Geography","score_opus":0.009070260756309812,"score_gpt":0.19619619510846623,"score_spread":0.1871259343521564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406643209","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000029006474,0.00021580252,8.815272e-7,0.00015973678,0.0000071275376,0.00066471763,0.000104839106,0.0002020103,0.99864197],"genre_scores_gemma":[0.000007683654,0.0000021902738,0.00010195822,0.0000817204,0.00058148714,0.000038458977,0.0003315177,0.00013239188,0.9987226],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99858934,0.00000948045,0.00032105332,0.00045321483,0.0003076679,0.0003192743],"domain_scores_gemma":[0.9988462,0.000038104165,0.00009074478,0.0006305079,0.000100199795,0.00029429604],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00006323026,0.00044472085,0.00060790265,0.0002956096,0.000113062204,0.00002263281,0.000099724304,0.0003828291,0.9985845],"category_scores_gemma":[0.000014499895,0.0003918564,0.00027967885,0.000053458727,0.00006679781,0.000040834933,0.00005633575,0.0003644212,0.99797505],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000206656,0.00013245152,2.2656111e-7,0.00003076268,0.00051915017,0.0002745037,0.000008637086,0.0000022165307,0.0000020188406,0.000089798734,0.2662503,0.73248327],"study_design_scores_gemma":[0.0008213414,0.00066086894,0.000009731343,0.0002616039,0.00054606725,0.00020856154,2.0697357e-7,0.0000053368667,0.0000080382515,0.00016710184,0.9969812,0.0003299203],"about_ca_topic_score_codex":0.000037105863,"about_ca_topic_score_gemma":4.167384e-7,"teacher_disagreement_score":0.73215336,"about_ca_system_score_codex":0.00021314669,"about_ca_system_score_gemma":0.00013099927,"threshold_uncertainty_score":0.9998533},"labels":[],"label_agreement":null},{"id":"W4406644821","doi":"10.1016/b978-84-8086-959-1.00351-5","title":"10.1016/b978-84-8086-959-1.00351-5","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.008869500342670936,"score_gpt":0.19530629379971545,"score_spread":0.1864367934570445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406644821","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000029810428,0.00025338677,9.984832e-7,0.00015607373,0.000008330976,0.00066132785,0.00010892192,0.00020106242,0.9986069],"genre_scores_gemma":[0.000008362273,0.0000027197136,0.00010283475,0.000084473984,0.00052379543,0.00003865438,0.0003336273,0.00013281933,0.99877274],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99856555,0.000009882831,0.00032607163,0.00045901508,0.0003134054,0.00032607772],"domain_scores_gemma":[0.99882,0.000037288515,0.00009356157,0.00064621755,0.000106177176,0.00029677464],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00006497974,0.00045091516,0.00060770824,0.0002929714,0.00011842733,0.000024383595,0.000102637656,0.00038981476,0.99841654],"category_scores_gemma":[0.000015654334,0.00039646914,0.00027420366,0.000056570057,0.00006967408,0.000042405907,0.000057199755,0.00037089924,0.9975661],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021310143,0.0001466479,2.4700225e-7,0.000034226945,0.00057214865,0.00027896662,0.000010478147,0.0000024174708,0.0000024016913,0.000105520565,0.3049159,0.6937179],"study_design_scores_gemma":[0.00082032435,0.00064542727,0.000010997502,0.00026126744,0.00057744776,0.00019302328,2.3572183e-7,0.000005621013,0.000009075089,0.00015315454,0.9969882,0.00033522598],"about_ca_topic_score_codex":0.000040602758,"about_ca_topic_score_gemma":5.1641024e-7,"teacher_disagreement_score":0.6933827,"about_ca_system_score_codex":0.0002134468,"about_ca_system_score_gemma":0.00013735642,"threshold_uncertainty_score":0.9998487},"labels":[],"label_agreement":null},{"id":"W4408732019","doi":"10.1016/j.ajpath.2025.02.008","title":"Human Mucin-2–Producing Colonic Goblet-Like Cells Secrete the Chemokine CXCL8 by Activating Multiple Proinflammatory Pathways in Response to Entamoeba histolytica","year":2025,"lang":"en","type":"article","venue":"American Journal Of Pathology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of Calgary","keywords":"Entamoeba histolytica; Mucin; Chemokine; Interleukin 8; Secretion; Biology; Goblet cell; Microbiology; Mucin 2; Immunology; Inflammation; Epithelium; Gene expression; Gene","score_opus":0.007908961790348305,"score_gpt":0.2670951933410525,"score_spread":0.2591862315507042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408732019","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99601567,0.00013365484,0.00034199303,0.002369166,0.00025031826,0.00042871063,0.000006704977,0.000019293915,0.00043448052],"genre_scores_gemma":[0.9965707,0.000014950554,0.0013801919,0.0012381824,0.000077170014,0.000031447267,0.0000029815556,0.000024280915,0.00066010485],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99808484,0.0004073782,0.0006585093,0.0002902906,0.00018500625,0.00037395736],"domain_scores_gemma":[0.9984321,0.00038540256,0.0005098475,0.00039087763,0.00015622732,0.00012556254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011771385,0.00020081166,0.0005907843,0.00038808185,0.00018897386,0.000012136731,0.00016403451,0.00006467854,0.00003694826],"category_scores_gemma":[0.0005186036,0.0001458464,0.00013177058,0.0005765094,0.00028349418,0.000059828853,0.00008068432,0.0005640788,0.000010523799],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017440099,0.0003849348,0.047331393,0.000028945573,0.00015814474,0.0014682538,0.003091765,0.000081571,0.93076646,0.000033399083,0.0022244123,0.012686699],"study_design_scores_gemma":[0.018893477,0.018335786,0.69202805,0.001528583,0.00072010874,0.0066152867,0.01189966,0.0004158911,0.20057529,0.00024894008,0.04777634,0.0009625944],"about_ca_topic_score_codex":0.00011754419,"about_ca_topic_score_gemma":0.000030101422,"teacher_disagreement_score":0.7301912,"about_ca_system_score_codex":0.0006001093,"about_ca_system_score_gemma":0.0003759365,"threshold_uncertainty_score":0.5947444},"labels":[],"label_agreement":null},{"id":"W4409159869","doi":"10.2196/66350","title":"Epidemiological Characteristics of Intestinal Protozoal Infections and Their Risk Factors in Malaysia: Systematic Review and Meta-Analysis Protocol","year":2025,"lang":"en","type":"article","venue":"JMIR Research Protocols","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Entamoeba histolytica; Cochrane Library; MEDLINE; Environmental health; Epidemiology; Socioeconomic status; Meta-analysis; Population; Internal medicine; Biology; Immunology","score_opus":0.2553319506883053,"score_gpt":0.5438412043729721,"score_spread":0.28850925368466684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409159869","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004407809,0.000053699467,0.00018701803,0.00025544333,7.1420254e-7,0.99456966,0.000038445327,0.000025194366,0.00046204336],"genre_scores_gemma":[0.05034236,0.000011680074,0.0001624028,0.000035299425,0.000005255213,0.94903517,0.0000082662655,0.000008952191,0.00039062856],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99645233,0.0016217883,0.0009515416,0.00040839537,0.00023644195,0.0003294819],"domain_scores_gemma":[0.99755436,0.0010962528,0.00030236412,0.0004984966,0.00041910633,0.00012939601],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003078402,0.00024704752,0.0023808794,0.0006838913,0.00015684363,0.000032229047,0.00009650811,0.00013029296,0.00019590175],"category_scores_gemma":[0.0034226128,0.00012749256,0.00037321114,0.0015837442,0.00031786453,0.00007860374,0.0001806619,0.00070036703,0.0000038134012],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013821882,0.0017437361,0.7567171,0.22346249,0.017172629,0.000013898161,0.00007932603,9.717457e-7,0.00002715701,0.00047731053,0.00008775488,0.000079430494],"study_design_scores_gemma":[0.005310239,0.008292959,0.8130339,0.06901692,0.09800631,0.00012729231,0.00030149118,0.00085830694,0.0005972298,0.002402478,0.001464742,0.00058817177],"about_ca_topic_score_codex":0.00013152735,"about_ca_topic_score_gemma":0.000016393262,"teacher_disagreement_score":0.15444557,"about_ca_system_score_codex":0.0000962554,"about_ca_system_score_gemma":0.000138734,"threshold_uncertainty_score":0.51989955},"labels":[],"label_agreement":null},{"id":"W4409160035","doi":"10.2196/preprints.66350","title":"Epidemiological Characteristics of Intestinal Protozoal Infections and Their Risk Factors in Malaysia: Systematic Review and Meta-Analysis Protocol (Preprint)","year":2024,"lang":"en","type":"preprint","venue":"","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Preprint; Meta-analysis; Protocol (science); Epidemiology; Environmental health; Medicine; Computer science; Internal medicine; Pathology; Alternative medicine; World Wide Web","score_opus":0.07101551559610703,"score_gpt":0.36210694138260163,"score_spread":0.2910914257864946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409160035","genre_codex":"protocol","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27944952,0.005710405,0.003779799,0.00077729515,0.000065123546,0.7069183,0.00058766047,0.0002682284,0.0024436512],"genre_scores_gemma":[0.71158046,0.00049860973,0.000581839,0.000052568204,0.000011525808,0.28688535,0.000047394315,0.000019994472,0.000322254],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9968828,0.0005817988,0.001520442,0.0006907204,0.00013164883,0.00019256545],"domain_scores_gemma":[0.99771357,0.00057837775,0.00074486947,0.0006535884,0.00018242173,0.0001271668],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014011478,0.00050631043,0.0051074536,0.00044924507,0.000047608883,0.00002922101,0.00007156249,0.00027116618,0.0005411849],"category_scores_gemma":[0.0018876455,0.00024407778,0.0010887391,0.00044913118,0.00014762545,0.000025731708,0.0006329946,0.0010310421,0.000008703726],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020500762,0.00070307316,0.41066098,0.46176317,0.12633792,0.000024790801,0.0001342467,0.000025568375,0.0000026364937,0.00027723567,0.000016904743,0.000032945118],"study_design_scores_gemma":[0.0003884657,0.00058105425,0.10982533,0.012658317,0.8716059,0.00020493119,0.00007935669,0.0019580463,0.00003846041,0.0022864926,0.000010323855,0.00036335053],"about_ca_topic_score_codex":0.0007187902,"about_ca_topic_score_gemma":0.0000414622,"teacher_disagreement_score":0.745268,"about_ca_system_score_codex":0.00009727567,"about_ca_system_score_gemma":0.00009024609,"threshold_uncertainty_score":0.9953203},"labels":[],"label_agreement":null},{"id":"W4409444987","doi":"10.1093/ptj/pzaf056","title":"Author Response to Luo and He","year":2025,"lang":"en","type":"article","venue":"Physical Therapy","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Health Sciences; Population Health Research Institute","funders":"","keywords":"Psychology","score_opus":0.02583127088022241,"score_gpt":0.3798668991442398,"score_spread":0.3540356282640174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409444987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98495096,0.00005945921,0.00022983356,0.011354333,0.000055145534,0.00019950782,0.000001743891,0.000036043828,0.0031129608],"genre_scores_gemma":[0.98263764,0.0000092636,0.00017299867,0.0011379593,0.0000645653,0.00003139663,8.4325086e-7,0.0000051506822,0.015940193],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.999684,0.000027777927,0.00004268823,0.00011109078,0.000051907642,0.00008256358],"domain_scores_gemma":[0.99971163,0.00007698995,0.000006111931,0.00012696051,0.00002123438,0.00005708045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000050308037,0.00005868993,0.000112708876,0.000043751865,0.000054390915,0.0000077299965,0.000015075936,0.00001712574,0.000026837262],"category_scores_gemma":[0.000024604296,0.000039616883,0.00003713034,0.00015095145,0.000022880045,0.0000151134545,0.000011139593,0.000048491325,0.00005287051],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01583717,0.0037754204,0.052310187,0.000034465145,0.0011366046,0.000068081565,0.0025709057,0.0000049856276,0.16846421,0.018100271,0.024641173,0.7130565],"study_design_scores_gemma":[0.0039450196,0.0016001698,0.70236367,0.00006375825,0.000065013315,0.00000696596,0.00006211571,0.00015537364,0.022290166,0.007854202,0.26146656,0.00012700444],"about_ca_topic_score_codex":0.000014325411,"about_ca_topic_score_gemma":2.921388e-7,"teacher_disagreement_score":0.71292955,"about_ca_system_score_codex":0.000021521908,"about_ca_system_score_gemma":0.000023189421,"threshold_uncertainty_score":0.16155297},"labels":[],"label_agreement":null},{"id":"W4410747000","doi":"10.1007/978-3-030-44092-3_4-2","title":"Nonvascular Emergencies","year":2025,"lang":"en","type":"book-chapter","venue":"","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University Health Network","funders":"","keywords":"Business","score_opus":0.013996584850773732,"score_gpt":0.25280511312248904,"score_spread":0.2388085282717153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410747000","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000149741,0.00069356064,0.00050306367,0.00015624211,0.0002860454,0.00023959434,0.000008095334,0.000080305705,0.99801815],"genre_scores_gemma":[0.0007019287,0.0006054139,0.00046159682,0.00024363525,0.00011094675,0.000009227898,0.00007155855,0.000017646238,0.99777806],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99946547,0.0000014538033,0.00013679729,0.00017810959,0.00012745189,0.00009073786],"domain_scores_gemma":[0.9995314,0.000009531773,0.000027864276,0.00030279427,0.00008061923,0.00004779458],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000023447417,0.00016454475,0.00026504372,0.00012690393,0.00005116463,0.000005855243,0.00002389007,0.0001819041,0.011772814],"category_scores_gemma":[0.000007385936,0.000120438286,0.0002607572,0.000016567086,0.000029119388,0.000019098454,0.000029197661,0.00013278032,0.0008033836],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017854218,0.00009308487,0.0006039891,0.00017848794,0.0024817486,0.0002353556,0.000017197204,2.972634e-7,0.0000059986273,0.84250665,0.13326776,0.020591581],"study_design_scores_gemma":[0.00034570348,0.00009101052,0.00016169951,0.00015673961,0.00067111047,0.000030442987,0.0000040855607,0.0000036494664,0.00003774081,0.0027603365,0.99563,0.00010746088],"about_ca_topic_score_codex":0.000045996294,"about_ca_topic_score_gemma":0.00001584134,"teacher_disagreement_score":0.86236227,"about_ca_system_score_codex":0.000064445514,"about_ca_system_score_gemma":0.00010917358,"threshold_uncertainty_score":0.9999746},"labels":[],"label_agreement":null},{"id":"W4411334943","doi":"10.1016/b978-0-12-824465-4.00213-1","title":"Immunity to Intestinal Protozoa: Entamoeba, Cryptosporidium and Giardia","year":2025,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Cryptosporidium; Giardia; Protozoa; Entamoeba; Microbiology; Biology; Entamoeba histolytica; Giardia lamblia; Feces","score_opus":0.011806554807736392,"score_gpt":0.2628163182776792,"score_spread":0.2510097634699428,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411334943","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00076204765,0.00041940837,0.000020360934,0.00017835356,0.00032198083,0.002885709,0.000034526187,0.00009946606,0.9952781],"genre_scores_gemma":[0.003329439,0.000052742387,0.0014763745,0.0005608762,0.0002579584,0.0003358137,0.00005510427,0.00005750942,0.9938742],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986528,0.000019585448,0.00037467756,0.0004483458,0.00023118855,0.00027340493],"domain_scores_gemma":[0.9987682,0.000059923575,0.00011863769,0.0005973035,0.00020450812,0.0002514067],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015664959,0.00044879958,0.0006761243,0.00028217136,0.00018582084,0.0000300346,0.00008817213,0.00027082485,0.00036469582],"category_scores_gemma":[0.00006223296,0.00038455435,0.00020509603,0.000025336778,0.0001285824,0.000022758362,0.00021926251,0.0006465954,0.00023600197],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013096741,0.000052668518,0.00094885717,0.00028602092,0.00044767733,0.0001780215,0.00012951622,4.1124395e-8,0.000031471955,0.0045949905,0.00086674764,0.992333],"study_design_scores_gemma":[0.0009197741,0.0005444344,0.0019045983,0.0018877897,0.0007022679,0.00024009008,0.000012862698,0.0000011841005,0.00017227847,0.002451118,0.9908353,0.00032831397],"about_ca_topic_score_codex":0.000010392789,"about_ca_topic_score_gemma":0.000016488237,"teacher_disagreement_score":0.9920047,"about_ca_system_score_codex":0.00022153356,"about_ca_system_score_gemma":0.00031602333,"threshold_uncertainty_score":0.99986064},"labels":[],"label_agreement":null},{"id":"W4412492620","doi":"10.1093/cid/ciae605","title":"Acute Appendicitis of Unexpected Etiology","year":2025,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; Calgary General Hospital; University of Calgary","funders":"","keywords":"Medicine; Etiology; Appendicitis; Acute appendicitis; Intensive care medicine; General surgery; Internal medicine","score_opus":0.016718215933529155,"score_gpt":0.4075119669652368,"score_spread":0.3907937510317076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412492620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96302235,0.00030799344,0.0008441377,0.0002960207,0.0007237754,0.00034220645,0.000055093846,0.00018368682,0.034224715],"genre_scores_gemma":[0.9974094,0.00031371752,0.000030662093,0.00066082436,0.00009897739,0.000042990137,0.00008038745,0.00000985793,0.0013532033],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988997,0.000095754236,0.00050430914,0.0002555543,0.00007698109,0.00016770624],"domain_scores_gemma":[0.9989059,0.00038463704,0.00011709005,0.00030881917,0.00015121393,0.00013231541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006940241,0.00012263583,0.0005058984,0.00016075894,0.00008155423,0.000005465795,0.000044536624,0.00014559076,0.00044226812],"category_scores_gemma":[0.000518,0.00009924652,0.00033482522,0.0003523466,0.00032873737,0.000031242063,0.000049863116,0.00015648495,0.00008763028],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011616568,0.0018299732,0.9815408,0.000042603857,0.0011295791,0.000055974673,0.0000054204543,0.000001963422,0.000056747947,0.0030414003,0.00376076,0.00841864],"study_design_scores_gemma":[0.003789564,0.0010365127,0.98739946,0.00010255547,0.001503727,0.00002131012,0.000016881153,0.000036398378,0.00017469336,0.0030129738,0.0028212394,0.00008468339],"about_ca_topic_score_codex":0.000042972842,"about_ca_topic_score_gemma":0.000010895265,"teacher_disagreement_score":0.034387007,"about_ca_system_score_codex":0.000046927198,"about_ca_system_score_gemma":0.00019655983,"threshold_uncertainty_score":0.48425257},"labels":[],"label_agreement":null},{"id":"W4412652556","doi":"10.1007/978-3-031-78916-8_4","title":"Nonvascular Emergencies","year":2025,"lang":"en","type":"book-chapter","venue":"","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University Health Network","funders":"","keywords":"Business","score_opus":0.013996584850773732,"score_gpt":0.25280511312248904,"score_spread":0.2388085282717153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412652556","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000149741,0.00069356064,0.00050306367,0.00015624211,0.0002860454,0.00023959434,0.000008095334,0.000080305705,0.99801815],"genre_scores_gemma":[0.0007019287,0.0006054139,0.00046159682,0.00024363525,0.00011094675,0.000009227898,0.00007155855,0.000017646238,0.99777806],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99946547,0.0000014538033,0.00013679729,0.00017810959,0.00012745189,0.00009073786],"domain_scores_gemma":[0.9995314,0.000009531773,0.000027864276,0.00030279427,0.00008061923,0.00004779458],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000023447417,0.00016454475,0.00026504372,0.00012690393,0.00005116463,0.000005855243,0.00002389007,0.0001819041,0.011772814],"category_scores_gemma":[0.000007385936,0.000120438286,0.0002607572,0.000016567086,0.000029119388,0.000019098454,0.000029197661,0.00013278032,0.0008033836],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017854218,0.00009308487,0.0006039891,0.00017848794,0.0024817486,0.0002353556,0.000017197204,2.972634e-7,0.0000059986273,0.84250665,0.13326776,0.020591581],"study_design_scores_gemma":[0.00034570348,0.00009101052,0.00016169951,0.00015673961,0.00067111047,0.000030442987,0.0000040855607,0.0000036494664,0.00003774081,0.0027603365,0.99563,0.00010746088],"about_ca_topic_score_codex":0.000045996294,"about_ca_topic_score_gemma":0.00001584134,"teacher_disagreement_score":0.86236227,"about_ca_system_score_codex":0.000064445514,"about_ca_system_score_gemma":0.00010917358,"threshold_uncertainty_score":0.9999746},"labels":[],"label_agreement":null},{"id":"W4413023790","doi":"10.1038/s41418-025-01552-1","title":"ABCC10-mediated cGAMP efflux drives cancer cell radiotherapy resistance","year":2025,"lang":"en","type":"article","venue":"Cell Death and Differentiation","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"Government of Jiangsu Province; Natural Science Foundation of Jiangsu Province; National Natural Science Foundation of China","keywords":"Efflux; Cancer; Drug resistance; Medicine; Cancer research; Biology; Internal medicine; Microbiology; Genetics","score_opus":0.006331910607260929,"score_gpt":0.2539077032023294,"score_spread":0.24757579259506848,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413023790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9621516,0.006010611,0.003332604,0.00018168498,0.00029072896,0.00033099795,0.000015095597,0.000062487525,0.02762423],"genre_scores_gemma":[0.97068936,0.0037449468,0.00029987821,0.00023805018,0.00006318999,0.00005391003,0.000116594354,0.0000109559205,0.024783133],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99936986,0.000023603685,0.00014710026,0.00021509269,0.00008948004,0.00015483858],"domain_scores_gemma":[0.9996188,0.000047537087,0.000057606132,0.00014959846,0.000053092797,0.00007335786],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00002860536,0.0001312561,0.00018229822,0.000077571785,0.00013515016,0.00002522433,0.000024618897,0.00008478728,0.00026102693],"category_scores_gemma":[0.000008198646,0.000105284045,0.000051917927,0.000113980364,0.000023402037,0.000060665927,0.000009809453,0.00006876579,0.000008471067],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002794308,0.00079023046,0.9540669,0.00045927762,0.00021791042,0.000007403979,0.00046640472,0.000004398806,0.034684006,0.00093896704,0.0036695297,0.004415587],"study_design_scores_gemma":[0.0048260987,0.00010403211,0.96276397,0.00012362163,0.0002685288,0.0000010013017,0.00005483143,0.00075382757,0.021028744,0.0002656682,0.009660839,0.0001488162],"about_ca_topic_score_codex":0.00011613625,"about_ca_topic_score_gemma":0.00008166525,"teacher_disagreement_score":0.013655262,"about_ca_system_score_codex":0.00012365429,"about_ca_system_score_gemma":0.000059650032,"threshold_uncertainty_score":0.42933586},"labels":[],"label_agreement":null},{"id":"W4413329351","doi":"10.3390/tropicalmed10080234","title":"Evaluation of Allplex™ GI-Parasite Assay—A Multiplex Real Time PCR for the Diagnosis of Intestinal Protozoa: A Multicentric Italian Study","year":2025,"lang":"en","type":"article","venue":"Tropical Medicine and Infectious Disease","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"","keywords":"Protozoa; Parasite hosting; Multiplex; Real-time polymerase chain reaction; Biology; Microbiology; Medicine; Virology; Bioinformatics; Genetics; Computer science","score_opus":0.042012758641740366,"score_gpt":0.3708321467261083,"score_spread":0.32881938808436795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413329351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903126,0.00045944157,0.00066509243,0.0008159628,0.00011597375,0.006165709,0.000016974025,0.000038201528,0.001410046],"genre_scores_gemma":[0.99765337,0.00009235808,0.00006367541,0.00009390736,0.00011048909,0.0018308411,0.000019002333,0.00001111927,0.00012521731],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984825,0.00020461825,0.00043764777,0.00025213018,0.000453029,0.00017005557],"domain_scores_gemma":[0.9978303,0.0008625883,0.00015305818,0.00028433985,0.0007146822,0.00015507858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052027625,0.00016947436,0.00041305769,0.00019657044,0.00013384121,0.0000057886627,0.000049989576,0.000047514062,0.00018143698],"category_scores_gemma":[0.0040786443,0.000100068035,0.00010926377,0.0003626229,0.00024029215,0.000047380265,0.00003465236,0.00010403898,0.000002804193],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000603312,0.0029225932,0.9719583,0.0002051099,0.0005886639,0.0000063055204,0.0002327722,0.000019117195,0.0000828736,0.00021290287,0.00050141226,0.02266666],"study_design_scores_gemma":[0.012096858,0.0028745732,0.96360207,0.0003087497,0.006028008,0.000005069035,0.00022819948,0.014217336,0.000061665945,0.0003172573,0.0001873465,0.000072898816],"about_ca_topic_score_codex":0.00070471154,"about_ca_topic_score_gemma":0.000062073705,"teacher_disagreement_score":0.022593759,"about_ca_system_score_codex":0.000106523614,"about_ca_system_score_gemma":0.00020726083,"threshold_uncertainty_score":0.48828125},"labels":[],"label_agreement":null},{"id":"W4414218061","doi":"10.3389/fmicb.2025.1641976","title":"Novel M23 peptidases Pgp4, Pgp5, and Pgp6 contribute to helical cell shape in Campylobacter jejuni","year":2025,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; UK Research and Innovation","keywords":"Peptidoglycan; Periplasmic space; Cleavage (geology); Cleave; Mutant; Glycan; Peptide; Peptide sequence; Signal peptide; Cell wall","score_opus":0.005176808333846194,"score_gpt":0.24345066874788526,"score_spread":0.23827386041403906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414218061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99138683,0.0007646318,0.0033123023,0.001365498,0.00066151575,0.0005855603,0.000111554335,0.000024606934,0.0017875221],"genre_scores_gemma":[0.9869341,0.000097639975,0.007678812,0.0020741648,0.00004004351,0.000054864657,0.00013060302,0.000012468502,0.002977306],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989217,0.000047257614,0.00027116123,0.00036281033,0.00002304375,0.0003740603],"domain_scores_gemma":[0.999597,0.00006015311,0.000034472956,0.00018858338,0.000043773736,0.00007598851],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011834939,0.00017382273,0.0004516115,0.00042083752,0.000046298777,0.000009492964,0.00006662128,0.00022440567,0.00007298274],"category_scores_gemma":[0.00007852784,0.00014991456,0.000050811424,0.00031484463,0.000119549906,0.0000309436,0.000093301016,0.00022603812,0.000028184279],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004090345,0.0008117614,0.86818147,0.000055742414,0.00010559314,0.00008199371,0.00019249826,0.0000051086427,0.10104917,0.00012268643,0.025386967,0.003597998],"study_design_scores_gemma":[0.02537123,0.0013337245,0.69135356,0.0006223315,0.00025671173,0.00040637882,0.00087278476,0.0003132392,0.023873497,0.00041169775,0.25446907,0.00071576756],"about_ca_topic_score_codex":0.00020568377,"about_ca_topic_score_gemma":0.00024303814,"teacher_disagreement_score":0.22908211,"about_ca_system_score_codex":0.00022652365,"about_ca_system_score_gemma":0.0000803124,"threshold_uncertainty_score":0.61133385},"labels":[],"label_agreement":null},{"id":"W4417065387","doi":"10.1055/a-2665-6052","title":"Therapierefraktäre blutige Durchfälle nach Tropenaufenthalt – Erstmanifestation einer Colitis ulcerosa","year":2025,"lang":"de","type":"article","venue":"Flugmedizin · Tropenmedizin · Reisemedizin - FTR","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pancolitis; Ulcerative colitis; Colitis; Ultrasonography","score_opus":0.010697399497661377,"score_gpt":0.2887488739221026,"score_spread":0.2780514744244412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417065387","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3209195,0.25406373,0.010894924,0.036951404,0.09110351,0.026720418,0.0038380343,0.0034290291,0.25207946],"genre_scores_gemma":[0.7879886,0.044296026,0.0051681157,0.0071178116,0.012043991,0.0027398923,0.004798289,0.00097058766,0.13487667],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.98281085,0.0019477231,0.003764077,0.0035672984,0.0039029303,0.0040070866],"domain_scores_gemma":[0.98992646,0.0013247273,0.0013902682,0.0035459744,0.0018705126,0.001942066],"candidate_categories":["metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"category_scores_codex":[0.0031551558,0.0028299165,0.003468425,0.0022337877,0.0021827447,0.0006455639,0.0017770928,0.0019876424,0.0093715545],"category_scores_gemma":[0.002166724,0.0025660465,0.0014168585,0.003851467,0.0019902994,0.0011372318,0.00095384085,0.0031317899,0.01056811],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0069056563,0.01149031,0.05041156,0.0035102118,0.028941382,0.0061646355,0.0073649962,0.00021584504,0.006313685,0.01670118,0.6931493,0.16883121],"study_design_scores_gemma":[0.029408718,0.0034001423,0.06274423,0.004771488,0.011457195,0.00019322972,0.0033488313,0.0017907826,0.006061189,0.0015837422,0.8723584,0.0028820634],"about_ca_topic_score_codex":0.0021129358,"about_ca_topic_score_gemma":0.0006766419,"teacher_disagreement_score":0.46706912,"about_ca_system_score_codex":0.003778273,"about_ca_system_score_gemma":0.0036760862,"threshold_uncertainty_score":0.999308},"labels":[],"label_agreement":null},{"id":"W58481436","doi":"10.1007/978-1-4419-8414-2_5","title":"Entamoeba histolytica Cathepsin-Like Enzymes","year":2011,"lang":"en","type":"review","venue":"Advances in experimental medicine and biology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Proteases; Entamoeba histolytica; Cathepsin B; Cathepsin C; Cathepsin; Microbiology; Cathepsin L; Biology; Deubiquitinating enzyme; Cathepsin S; Cysteine protease; Amoeba (genus); Cell biology; Biochemistry; Enzyme","score_opus":0.09139870941837867,"score_gpt":0.4367446235417806,"score_spread":0.34534591412340193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W58481436","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000058143334,0.97798586,0.000007859097,0.000030687926,0.0009809453,0.00064595655,0.000008035327,0.000035478723,0.020247037],"genre_scores_gemma":[0.0017440539,0.9963349,0.00025681933,0.00025411678,0.0002920738,0.00022760435,0.00018855237,0.000034081007,0.000667794],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984345,0.000082749655,0.00055692345,0.00053497177,0.00005975355,0.00033111463],"domain_scores_gemma":[0.99922955,0.00012845395,0.00019248697,0.0002895444,0.000019228204,0.0001407359],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009200457,0.0004419172,0.0017487501,0.00033098663,0.00006546898,0.0000020754985,0.00008961955,0.00029789045,0.00056777505],"category_scores_gemma":[0.00003251932,0.00026598448,0.00014704556,0.00019179269,0.0006843684,0.000071975424,0.00008197148,0.00029953822,0.000044438544],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046404137,0.00043292707,0.00051936397,0.0014078451,0.00014703425,0.00009609841,0.0003675448,2.4095017e-9,0.000010535694,0.0045304312,0.00029166948,0.9921501],"study_design_scores_gemma":[0.0011385939,0.0017398355,0.000007995277,0.0040636654,0.00042472684,0.0007643284,0.00024569992,2.8255545e-7,0.00002752526,0.00016171123,0.9912095,0.00021610936],"about_ca_topic_score_codex":0.00016765815,"about_ca_topic_score_gemma":0.000015594655,"teacher_disagreement_score":0.99193406,"about_ca_system_score_codex":0.00021473353,"about_ca_system_score_gemma":0.00007861782,"threshold_uncertainty_score":0.99997926},"labels":[],"label_agreement":null},{"id":"W6901863746","doi":"10.60692/5pe1f-7t569","title":"Entamoeba bangladeshinov. sp., Bangladesh","year":2012,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Centre for Disease Control; Interior Health","funders":"","keywords":"Entamoeba histolytica; Entamoeba; Diarrheal disease; Diarrhea; Dysentery; Diarrheal diseases; Amoebiasis","score_opus":0.030239958569199376,"score_gpt":0.23205622045212143,"score_spread":0.20181626188292207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901863746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9107226,0.000011373408,0.004064491,0.00005592187,0.0008391841,0.00053876906,0.0000522897,0.00034953185,0.08336584],"genre_scores_gemma":[0.99806577,1.08059844e-7,0.00042594117,0.00025989002,0.00026418729,0.00007895757,0.00007634822,0.000014288403,0.00081449293],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99880874,0.000028288467,0.00042609693,0.000092897484,0.0002777368,0.00036626367],"domain_scores_gemma":[0.999139,0.0000047324993,0.00016186094,0.00034151186,0.00012080836,0.00023206143],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002093925,0.0001823821,0.00024173738,0.00025484143,0.00015229125,0.000059763315,0.000051097817,0.00012351866,0.00034707604],"category_scores_gemma":[0.000012455432,0.00013631574,0.00011949119,0.00022454314,0.00002602713,0.0008962403,0.000032323565,0.00010876163,0.0062374994],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033236203,0.000012039009,0.98193634,0.00017806215,0.000104062594,0.0000041090548,0.016107174,0.000001668987,0.0000011894191,0.0006600027,0.00043799015,0.00052412227],"study_design_scores_gemma":[0.0030269362,0.00012315341,0.9760246,0.00018599829,0.0002217685,0.0006850929,0.008733853,0.00020455019,0.0009573964,7.00298e-7,0.009587612,0.0002483104],"about_ca_topic_score_codex":0.000012220907,"about_ca_topic_score_gemma":5.3047703e-8,"teacher_disagreement_score":0.087343186,"about_ca_system_score_codex":0.00025534094,"about_ca_system_score_gemma":0.00003243993,"threshold_uncertainty_score":0.9945363},"labels":[],"label_agreement":null},{"id":"W6929641810","doi":"10.5064/f6z31wj1/9qje7s","title":"Johnson_Senate41_LCJC_16ev_20140917.pdf","year":2023,"lang":"pl","type":"dataset","venue":"Syracuse University Qualitative Data Repository","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Process (computing); Identification (biology); Product (mathematics)","score_opus":0.09107196365869034,"score_gpt":0.3763336549855648,"score_spread":0.28526169132687446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929641810","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015713742,0.00032159846,0.00016011442,0.00032917206,0.004204711,0.0012854538,0.98240757,0.00033703388,0.009382983],"genre_scores_gemma":[0.0004759262,0.0017950471,0.00037026845,0.000118731616,0.0008032001,0.0000045241595,0.8464882,0.000106209154,0.14983793],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99140185,0.002706077,0.0009870522,0.0025209687,0.0012785554,0.0011054862],"domain_scores_gemma":[0.98997265,0.002184055,0.0011513843,0.0051625962,0.0007374781,0.00079183525],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0017106609,0.0011678474,0.0016456933,0.0013086278,0.0015976125,0.0001562111,0.002173814,0.0010960461,0.00097027153],"category_scores_gemma":[0.00085955334,0.0012056655,0.00044983785,0.001432624,0.0011021688,0.001110884,0.002802054,0.0017615388,0.13056567],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061108044,0.0012183002,0.00014424449,0.00065363396,0.004390225,0.010077893,0.0034508407,0.0000021958974,0.000062418585,0.00019901857,0.97902304,0.00016713499],"study_design_scores_gemma":[0.0035449564,0.0006940836,0.0006810857,0.0010584198,0.004214428,0.000246689,0.042315535,0.000091595975,0.000052450116,0.000026084068,0.9459903,0.0010843474],"about_ca_topic_score_codex":0.019528916,"about_ca_topic_score_gemma":0.00085208117,"teacher_disagreement_score":0.14045495,"about_ca_system_score_codex":0.0016235412,"about_ca_system_score_gemma":0.0014558511,"threshold_uncertainty_score":0.99994296},"labels":[],"label_agreement":null},{"id":"W6930228348","doi":"10.5281/zenodo.11812708","title":"Großer herr und starker könig noten pdf","year":2024,"lang":"de","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Adornment; Choir; Glory; Bass (fish)","score_opus":0.027183528465390065,"score_gpt":0.27416673342119624,"score_spread":0.24698320495580617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930228348","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026893758,0.005263392,0.0009491639,0.0008751937,0.0011749534,0.001234473,0.00069579354,0.0010199473,0.9885181],"genre_scores_gemma":[0.0171199,0.00142693,0.00026484238,0.0003177069,0.0019449347,2.0273492e-7,0.0062602907,0.013862944,0.9588022],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964721,0.0004253205,0.00051554246,0.0010751844,0.0007475267,0.0007642964],"domain_scores_gemma":[0.9976635,0.000029668037,0.00021104925,0.0010600791,0.0005628961,0.00047280968],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0006114017,0.0005494277,0.0005376364,0.0007783416,0.0015386112,0.0009838039,0.0006842988,0.00041028985,0.55381584],"category_scores_gemma":[0.00043022647,0.00051332515,0.00024745386,0.00093251496,0.00037332377,0.0001383317,0.001290734,0.0010236871,0.82938117],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013019227,0.00053574395,0.000011672298,0.00052305777,0.0022506865,0.0004749097,0.00062206713,0.0000042035163,0.00009221068,0.002169239,0.9437328,0.049453214],"study_design_scores_gemma":[0.001329325,0.0006448919,0.00026511613,0.00065224216,0.0009959905,0.00016284939,0.00021066757,0.00008825865,0.000028487455,0.00025012044,0.99493176,0.00044028505],"about_ca_topic_score_codex":0.00012478101,"about_ca_topic_score_gemma":0.0000019100987,"teacher_disagreement_score":0.27556536,"about_ca_system_score_codex":0.00069922686,"about_ca_system_score_gemma":0.0000219324,"threshold_uncertainty_score":0.9997612},"labels":[],"label_agreement":null},{"id":"W6930231081","doi":"10.5281/zenodo.12289945","title":"tupperware catalogue 2020 pdf","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Filter (signal processing); Work (physics); Product (mathematics); Staring; Limiting","score_opus":0.02054718899845487,"score_gpt":0.25875608438721787,"score_spread":0.238208895388763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930231081","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000038037815,0.0006416346,0.00022826515,0.00048772912,0.00026285145,0.0005667648,0.0008673017,0.001426729,0.9954807],"genre_scores_gemma":[0.0053311028,0.0003230768,0.00014774484,0.00012828421,0.0006367925,8.840758e-8,0.014014255,0.009855443,0.9695632],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99868274,0.00007919206,0.00017516466,0.0004834161,0.0002880685,0.00029139285],"domain_scores_gemma":[0.9990415,0.000005028234,0.00007151819,0.0005215865,0.00016483356,0.00019556339],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011197341,0.00021991736,0.0002473855,0.0003611158,0.00047512705,0.00026180813,0.0002681675,0.00018255095,0.27665815],"category_scores_gemma":[0.00013845816,0.0002005532,0.00010580464,0.0004379419,0.00012335302,0.000041285788,0.00052488653,0.00039453272,0.4182399],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001808777,0.00013491574,0.0000021329042,0.0002748018,0.00026218896,0.00022665365,0.0001218154,2.7618793e-7,0.00004255804,0.00037439386,0.9854645,0.013077639],"study_design_scores_gemma":[0.00048145215,0.00025596938,0.00005940252,0.00030335013,0.00014902456,0.00069392927,0.000074142255,0.0000119074775,0.000021000693,0.000050826613,0.9977337,0.00016529403],"about_ca_topic_score_codex":0.000099052726,"about_ca_topic_score_gemma":0.0000017342909,"teacher_disagreement_score":0.14158176,"about_ca_system_score_codex":0.00019563566,"about_ca_system_score_gemma":0.000007290885,"threshold_uncertainty_score":0.81783223},"labels":[],"label_agreement":null},{"id":"W6930277474","doi":"10.5281/zenodo.11773898","title":"time to shine book pdf","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Paraphernalia; Gloom; Pretext; Staring; Limiting; Subject (documents)","score_opus":0.01737608084181141,"score_gpt":0.2541136314053715,"score_spread":0.2367375505635601,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930277474","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000016157806,0.0004727897,0.00016743534,0.00096957077,0.00011835596,0.0007254809,0.00025431556,0.0013974691,0.9958784],"genre_scores_gemma":[0.00020305168,0.0000874428,0.00015855012,0.00045166208,0.00045446373,8.292059e-8,0.0020562217,0.008332199,0.98825634],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987495,0.00006718528,0.00016472032,0.00044624912,0.00029226617,0.00028006607],"domain_scores_gemma":[0.9990516,0.000004913055,0.000052702326,0.00048752548,0.00015140248,0.00025189048],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00015736096,0.00020298829,0.0002418681,0.0005346096,0.00035661354,0.00023423476,0.00025121795,0.00013426878,0.69475645],"category_scores_gemma":[0.00014625369,0.00018533079,0.00008429877,0.00043453992,0.00008365602,0.000041362924,0.0005539644,0.00028281938,0.838878],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026951222,0.00012529705,2.153708e-7,0.00012851876,0.00021258688,0.00010021984,0.00009749443,6.226973e-7,0.000106065054,0.00015568246,0.9859558,0.013090599],"study_design_scores_gemma":[0.0003981191,0.0003931104,0.000015930682,0.00028701962,0.00011459893,0.0002585742,0.000016513462,0.000018625491,0.000021859298,0.000018596218,0.9983008,0.00015624402],"about_ca_topic_score_codex":0.000021998589,"about_ca_topic_score_gemma":2.1431391e-7,"teacher_disagreement_score":0.1441215,"about_ca_system_score_codex":0.00020428697,"about_ca_system_score_gemma":0.000005404227,"threshold_uncertainty_score":0.75575703},"labels":[],"label_agreement":null},{"id":"W6931286401","doi":"10.5281/zenodo.5697674","title":"Prothalpia undata LeConte","year":2006,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Deciduous; Key (lock); Taxonomy (biology); Event (particle physics)","score_opus":0.030486108025679866,"score_gpt":0.25793362449304735,"score_spread":0.2274475164673675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931286401","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07518493,0.00007509399,0.0029256444,0.001008378,0.000085815635,0.00088414137,0.00013673198,0.00094894355,0.91875035],"genre_scores_gemma":[0.98251915,0.000015032953,0.00036113546,0.00008828732,0.00018906286,6.79753e-8,0.0022237785,0.0007664446,0.013837045],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99910057,0.00006962783,0.00015837268,0.00025055592,0.00018881356,0.00023205127],"domain_scores_gemma":[0.99923027,0.000006812548,0.000049053688,0.00035081277,0.00026950336,0.00009354444],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018634587,0.000095428906,0.00011313088,0.0001406986,0.0011483245,0.00020264261,0.00018135118,0.000042336134,0.013898158],"category_scores_gemma":[0.000116637646,0.00008777897,0.000045711564,0.00029098126,0.00009181477,0.00012917521,0.00025232614,0.00014114514,0.011291046],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000292189,0.0017505367,0.0006586887,0.00017593296,0.00026618698,0.00022192184,0.0003478895,0.000035592042,0.008042704,0.028558234,0.7338454,0.22580473],"study_design_scores_gemma":[0.0009922212,0.00028352428,0.006908506,0.000024147515,0.000030072706,0.00038282573,0.00003943607,0.00010777643,0.00053727534,0.00018480103,0.99042296,0.00008643562],"about_ca_topic_score_codex":0.00010205602,"about_ca_topic_score_gemma":6.928277e-7,"teacher_disagreement_score":0.9073342,"about_ca_system_score_codex":0.00013517887,"about_ca_system_score_gemma":0.000003980089,"threshold_uncertainty_score":0.98947877},"labels":[],"label_agreement":null},{"id":"W6931330825","doi":"10.5281/zenodo.7103644","title":"FIGURES 31–33 in New Australasian Parathalassiinae (Diptera: Dolichopodidae sensu lato)","year":2022,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Holotype; Dolichopodidae; Lobe; Dorsum; Sensu","score_opus":0.028498917949834657,"score_gpt":0.2713127583183673,"score_spread":0.24281384036853265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931330825","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016591764,0.00026048275,0.000045885645,0.0005605087,0.00016603919,0.0008984467,0.00040554753,0.0008782945,0.9951256],"genre_scores_gemma":[0.040398363,0.00033889338,0.00021629778,0.00018413906,0.0005124028,2.3190591e-7,0.005684122,0.0062986934,0.94636685],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99806833,0.00020658725,0.0002866604,0.0005705335,0.0004107149,0.00045714964],"domain_scores_gemma":[0.9988268,0.000013129176,0.00015197926,0.000633727,0.0000897863,0.00028455854],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00020988911,0.00029727368,0.0003691422,0.0007584852,0.00070434704,0.00021766657,0.0003687016,0.00019721506,0.2271293],"category_scores_gemma":[0.00017123908,0.00029666873,0.00011050626,0.00069492275,0.00010417261,0.00006834593,0.0005469659,0.0006798959,0.012166256],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059365655,0.00031521366,0.00024146402,0.0000987445,0.00016086288,0.0003103473,0.0002950809,0.0000054165794,0.00004571725,0.00057435624,0.9779035,0.019989965],"study_design_scores_gemma":[0.0016586202,0.00035952465,0.0042530145,0.00013249635,0.00006632407,0.00040619008,0.0001424148,0.000013942429,0.00001333024,0.00003693037,0.99269134,0.00022590398],"about_ca_topic_score_codex":0.00047847582,"about_ca_topic_score_gemma":0.000016751083,"teacher_disagreement_score":0.21496303,"about_ca_system_score_codex":0.0004864572,"about_ca_system_score_gemma":0.00003221689,"threshold_uncertainty_score":0.99994856},"labels":[],"label_agreement":null},{"id":"W6931381033","doi":"10.5281/zenodo.4210961","title":"[READ] W. Stanford Reid: An Evangelical Calvinist in the Academy (Volume 31) (McGill-Queen's Studies in the History of Religion) [Full]","year":2020,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"History of religions; Intellectual history; History of Christianity; American history; Church history; Download; History of science; Modern history","score_opus":0.10432327760648243,"score_gpt":0.3215839877506694,"score_spread":0.21726071014418696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931381033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5436309,0.001477289,0.00016101924,0.044405147,0.00032381542,0.0038445687,0.00030417732,0.00070700474,0.4051461],"genre_scores_gemma":[0.99632204,0.00047307037,0.00006118976,0.001490312,0.00010185706,3.821916e-7,0.00022840299,0.00028499417,0.0010377417],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982592,0.0005012179,0.00031261818,0.000274698,0.00039512414,0.00025713936],"domain_scores_gemma":[0.9992663,0.000052220996,0.00008899828,0.00030572023,0.00018957378,0.00009713893],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000680048,0.00012273355,0.00020454965,0.00013439605,0.00041409532,0.00003987651,0.0004423099,0.000063357176,0.000764098],"category_scores_gemma":[0.00089681876,0.00008095369,0.000052267023,0.00053795346,0.00030041242,0.00014538498,0.00024883106,0.00045300453,0.00091017777],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009803324,0.0013755949,0.00058409426,0.00033788945,0.00020537667,0.00035771102,0.031429898,0.0000416338,0.00072462804,0.016929455,0.91948843,0.027544942],"study_design_scores_gemma":[0.0008834701,0.00094798085,0.0029736424,0.000042016865,0.000038249873,0.00011081875,0.003627605,0.00017439795,0.000013486991,0.00010177368,0.9910061,0.00008047345],"about_ca_topic_score_codex":0.00008968069,"about_ca_topic_score_gemma":0.0000016040195,"teacher_disagreement_score":0.45269117,"about_ca_system_score_codex":0.0004946765,"about_ca_system_score_gemma":0.000012371031,"threshold_uncertainty_score":0.99986774},"labels":[],"label_agreement":null},{"id":"W6958532110","doi":"10.6084/m9.figshare.26697080.v1","title":"Additional file 2 of Integrative multi-omics analysis identifies genetically supported druggable targets and immune cell specificity for myasthenia gravis","year":2024,"lang":"en","type":"dataset","venue":"Figshare","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Genome-wide association study; Table (database); Colocalization; Expression quantitative trait loci; Druggability; Genetic association","score_opus":0.018061591523529867,"score_gpt":0.27325519200775467,"score_spread":0.2551936004842248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958532110","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000004133025,0.0002961877,0.0000040000373,0.000007861145,0.000044857126,0.0006271777,0.9988229,0.000022936985,0.00016993242],"genre_scores_gemma":[0.000020637171,0.00002203876,0.0013856252,0.0000160698,0.00009363819,0.0015308962,0.99211997,0.000027399687,0.0047837566],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99867535,0.00002333545,0.00042869605,0.00045572917,0.00020053703,0.00021634363],"domain_scores_gemma":[0.9981482,0.0006916434,0.00026293946,0.0003631323,0.00043104877,0.00010305671],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000026161315,0.00033180957,0.0007181695,0.000400031,0.00009796365,0.000048406724,0.00010146422,0.00026386583,0.9776462],"category_scores_gemma":[0.0008264363,0.0002582701,0.00047145752,0.00038384422,0.000040176456,0.0000413227,0.00011624519,0.00028274962,0.002393297],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003599831,0.00021862726,0.0000018070344,0.0007204541,0.0016858798,0.000042582218,0.000023812372,0.0000013531477,0.000006425239,2.1477139e-7,0.9971928,0.000070057125],"study_design_scores_gemma":[0.00041898942,0.00016136591,0.0010202706,0.0014274424,0.0019343174,0.000011996812,0.00007216223,0.00030372356,0.0003331221,0.000021893331,0.99409443,0.00020030553],"about_ca_topic_score_codex":0.00005636944,"about_ca_topic_score_gemma":0.00018712513,"teacher_disagreement_score":0.97525287,"about_ca_system_score_codex":0.00007753276,"about_ca_system_score_gemma":0.00022107208,"threshold_uncertainty_score":0.99998695},"labels":[],"label_agreement":null},{"id":"W6976818679","doi":"10.60692/2rh6s-aqe15","title":"Entamoeba bangladeshinov. sp., Bangladesh","year":2012,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Centre for Disease Control; Interior Health","funders":"","keywords":"Entamoeba histolytica; Entamoeba; Diarrheal disease; Diarrhea; Dysentery; Diarrheal diseases; Amoebiasis","score_opus":0.030239958569199376,"score_gpt":0.23205622045212143,"score_spread":0.20181626188292207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6976818679","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9107226,0.000011373408,0.004064491,0.00005592187,0.0008391841,0.00053876906,0.0000522897,0.00034953185,0.08336584],"genre_scores_gemma":[0.99806577,1.08059844e-7,0.00042594117,0.00025989002,0.00026418729,0.00007895757,0.00007634822,0.000014288403,0.00081449293],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99880874,0.000028288467,0.00042609693,0.000092897484,0.0002777368,0.00036626367],"domain_scores_gemma":[0.999139,0.0000047324993,0.00016186094,0.00034151186,0.00012080836,0.00023206143],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002093925,0.0001823821,0.00024173738,0.00025484143,0.00015229125,0.000059763315,0.000051097817,0.00012351866,0.00034707604],"category_scores_gemma":[0.000012455432,0.00013631574,0.00011949119,0.00022454314,0.00002602713,0.0008962403,0.000032323565,0.00010876163,0.0062374994],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033236203,0.000012039009,0.98193634,0.00017806215,0.000104062594,0.0000041090548,0.016107174,0.000001668987,0.0000011894191,0.0006600027,0.00043799015,0.00052412227],"study_design_scores_gemma":[0.0030269362,0.00012315341,0.9760246,0.00018599829,0.0002217685,0.0006850929,0.008733853,0.00020455019,0.0009573964,7.00298e-7,0.009587612,0.0002483104],"about_ca_topic_score_codex":0.000012220907,"about_ca_topic_score_gemma":5.3047703e-8,"teacher_disagreement_score":0.087343186,"about_ca_system_score_codex":0.00025534094,"about_ca_system_score_gemma":0.00003243993,"threshold_uncertainty_score":0.9945363},"labels":[],"label_agreement":null},{"id":"W6981539464","doi":"","title":"Episode 19: To be not a man online.","year":2018,"lang":"en","type":"other","venue":"Bulletin of Miscellaneous Information (Royal Gardens Kew)","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"MRAS; Context (archaeology); Download; The Internet","score_opus":0.01138962757433414,"score_gpt":0.22923811504037167,"score_spread":0.21784848746603752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6981539464","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00028453494,0.000050092465,0.0000011119638,0.0009733147,0.00030370054,0.00077058125,0.0003209271,0.00021018165,0.9970856],"genre_scores_gemma":[0.00047439258,0.00008191507,0.0036149917,0.0029954005,0.00037835713,0.000029466082,0.00052306167,0.00014494588,0.99175745],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985506,0.000030016903,0.0005074612,0.00022660929,0.0003872168,0.00029809098],"domain_scores_gemma":[0.99870443,0.000044078955,0.00031081846,0.00048949034,0.00017397867,0.00027721457],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00009892517,0.0003435817,0.00050224713,0.00016117221,0.00006996722,0.00002103058,0.00013853467,0.0003770263,0.56325895],"category_scores_gemma":[0.00014146931,0.0003035403,0.00019256346,0.000012367729,0.00010772965,9.634342e-8,0.00007923246,0.00018005131,0.0452954],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015450285,0.00018331362,0.00002729271,0.0003257963,0.00019283633,0.00004815356,0.0000817973,0.000009461946,2.0469258e-7,0.000012590945,0.9975785,0.0013855473],"study_design_scores_gemma":[0.0010195071,0.00061040977,0.00007456358,0.00034420684,0.0001939533,0.00025251263,0.000060298495,0.0000065936556,0.000010354689,0.0000020069317,0.9971703,0.00025527328],"about_ca_topic_score_codex":0.009079273,"about_ca_topic_score_gemma":0.0036810762,"teacher_disagreement_score":0.5179635,"about_ca_system_score_codex":0.0001050238,"about_ca_system_score_gemma":0.000051346495,"threshold_uncertainty_score":0.99994165},"labels":[],"label_agreement":null},{"id":"W6995492711","doi":"","title":"Orbital Energy Group Reports Second Quarter 2021 Financial Results","year":2021,"lang":"en","type":"other","venue":"","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Quarter (Canadian coin); Group (periodic table); Energy (signal processing); Financial Audit; Term (time)","score_opus":0.006250424492894131,"score_gpt":0.23199051466217144,"score_spread":0.22574009016927732,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6995492711","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026283754,0.0007429015,0.00019927302,0.00009471719,0.0013595005,0.00015897138,0.000056242323,0.00008007084,0.99704546],"genre_scores_gemma":[0.011860028,0.000053845994,0.0007045375,0.00022700228,0.0015155948,0.000040541934,0.0016661126,0.00017226925,0.98376006],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99864024,0.000023209548,0.00037290485,0.00053210696,0.00019533726,0.00023618106],"domain_scores_gemma":[0.9990288,0.000016455777,0.00019306548,0.00059483666,0.00004815511,0.000118705415],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00005771775,0.0002748867,0.00048031012,0.0001761912,0.00004387989,0.000017744536,0.000024375568,0.00042377133,0.08512616],"category_scores_gemma":[0.000046959885,0.00021436138,0.00020891077,0.00015063181,0.00003740875,0.00001794694,0.00003403506,0.00016416678,0.00012424137],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033437176,0.0003015337,0.0003409081,0.000038220467,0.00024614908,0.008601933,0.0000143282905,1.7891137e-8,0.000015079275,0.00045389327,0.988107,0.0018474621],"study_design_scores_gemma":[0.001216896,0.00023758368,0.0012772469,0.00025216295,0.00012706201,0.0017283999,0.000020108897,0.0000013101252,0.00006360028,0.00005641528,0.99481136,0.0002078365],"about_ca_topic_score_codex":0.001713879,"about_ca_topic_score_gemma":0.004424276,"teacher_disagreement_score":0.085001916,"about_ca_system_score_codex":0.00007190107,"about_ca_system_score_gemma":0.00019809896,"threshold_uncertainty_score":0.91571015},"labels":[],"label_agreement":null},{"id":"W7000307724","doi":"","title":"Entamoeba histolytica cysteine proteinases facilitate parasite invasion of the colon by disrupting the colonic mucus barrier","year":2005,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Mucin; Mucus; Entamoeba histolytica; Cysteine protease; Cysteine; Secretion; Mucin 2; Protease; Proteases","score_opus":0.015473206839389858,"score_gpt":0.2537406172366333,"score_spread":0.23826741039724347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7000307724","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9523543,0.0010753677,8.0742716e-8,0.0001237331,0.0006276193,0.0031475117,0.0015607108,0.00011134049,0.040999345],"genre_scores_gemma":[0.9575759,0.00021791056,0.00007340452,0.00020686029,0.000049922775,0.0005925368,0.000943907,0.00013330225,0.04020624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959135,0.00045985394,0.0011104626,0.00085169735,0.0009819501,0.00068250083],"domain_scores_gemma":[0.99676794,0.0003490554,0.00095993927,0.0012089323,0.0004542809,0.00025986653],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0006881834,0.00076803454,0.0009402983,0.00020291732,0.0017434473,0.000038979673,0.0004631586,0.0006225224,0.00037057092],"category_scores_gemma":[0.0010971252,0.00048532416,0.00064901926,0.00062797725,0.00023453264,0.00027406556,0.00014487724,0.0014442978,0.00017854675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006816961,0.005716103,0.010403141,0.0043172454,0.0049738465,0.00045313156,0.00050945673,0.00006760336,0.7393122,0.030613005,0.00047759223,0.19633974],"study_design_scores_gemma":[0.010009968,0.004291165,0.026193859,0.0050977515,0.005489691,0.0005505287,0.0023393994,0.0000761196,0.59908986,0.002035044,0.34263986,0.0021867377],"about_ca_topic_score_codex":0.0008595138,"about_ca_topic_score_gemma":0.0022720704,"teacher_disagreement_score":0.34216228,"about_ca_system_score_codex":0.0013547554,"about_ca_system_score_gemma":0.00018806237,"threshold_uncertainty_score":0.99975985},"labels":[],"label_agreement":null},{"id":"W7034470049","doi":"","title":"TriStar Gold Inc : Exhibiting at Booth 308, Vancouver Resource Investment Conference, Jan 20-21, 2019","year":2019,"lang":"en","type":"other","venue":"","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Investment (military); Resource (disambiguation); Payment; Investment analysis","score_opus":0.01311353364210214,"score_gpt":0.2435745360754666,"score_spread":0.23046100243336448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7034470049","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000290521,0.0005928806,0.00006629407,0.00013117722,0.0006212112,0.0013912518,0.00013300842,0.00031206082,0.9964616],"genre_scores_gemma":[0.0024965855,0.00012514,0.00069651706,0.0014906225,0.00047452125,0.000058628855,0.0005264516,0.00043152334,0.9937],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99798304,0.00005981186,0.00040131586,0.000650962,0.00042250718,0.00048236936],"domain_scores_gemma":[0.99846315,0.000055197375,0.00032521333,0.0008361302,0.00006791316,0.00025238795],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011984639,0.0005377891,0.00080334884,0.00039275884,0.000081808466,0.000026313217,0.00011020439,0.0005041443,0.020161701],"category_scores_gemma":[0.000020352169,0.00040075238,0.00020159064,0.00016207735,0.00010222454,0.000036510486,0.00016346526,0.0003484156,0.0047120964],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055460754,0.00023636072,0.0021249882,0.00012585837,0.00045225894,0.00007188433,0.000057105488,0.000001217872,0.000023158953,0.00073052093,0.9954255,0.0006956406],"study_design_scores_gemma":[0.003323272,0.00033905674,0.0001586869,0.00057527196,0.0003514106,0.000029768187,0.00013146854,0.000043885164,0.000078827645,0.000027161946,0.99455696,0.00038425325],"about_ca_topic_score_codex":0.0021726121,"about_ca_topic_score_gemma":0.0020652264,"teacher_disagreement_score":0.015449605,"about_ca_system_score_codex":0.0005171808,"about_ca_system_score_gemma":0.00025190203,"threshold_uncertainty_score":0.99984443},"labels":[],"label_agreement":null},{"id":"W7039263699","doi":"","title":"Le dialogue dans le programme scolaire d'Ã©thique et culture religieuse : dÃ©bats, bilan et prospective","year":2012,"lang":"fr","type":"other","venue":"Library and Archives Canada (Government of Canada)","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Nucleofection; Gestational period; TSG101; Dysgeusia; Diafiltration; Liquation; Emperipolesis; Triacetin; Demotion","score_opus":0.003493332470731615,"score_gpt":0.166855376467082,"score_spread":0.1633620439963504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7039263699","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0036586048,0.003301765,0.00020460328,0.00726672,0.0007080495,0.0014597735,0.0009122726,0.000041979456,0.98244625],"genre_scores_gemma":[0.6694082,0.0012348348,0.0012711595,0.0014390467,0.00032270653,0.00012215645,0.0001560668,0.00016224846,0.3258836],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9966887,0.00025848343,0.00044219854,0.0005633489,0.0012597031,0.0007875268],"domain_scores_gemma":[0.9982833,0.0001703878,0.00037340668,0.00045533967,0.0000025740908,0.0007149946],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000034769957,0.0006073245,0.0007262853,0.0000569096,0.000375032,0.000044358632,0.00021575483,0.00020903321,0.0002479081],"category_scores_gemma":[0.00001578514,0.00052935566,0.000111455745,0.00015871717,0.00031458488,0.00040326177,0.000207693,0.00062569766,9.317699e-8],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040141426,0.00070756394,0.25990367,0.0007498441,0.0010445404,0.00045613333,0.001194219,0.000011903859,0.0014209083,0.7202737,0.0067004594,0.0071356483],"study_design_scores_gemma":[0.0027111345,0.00064725237,0.28018835,0.0017803746,0.00037754807,0.000109405584,0.006564332,0.00006524659,0.011197514,0.0018155364,0.69370455,0.00083876017],"about_ca_topic_score_codex":0.08372519,"about_ca_topic_score_gemma":0.41306847,"teacher_disagreement_score":0.7184582,"about_ca_system_score_codex":0.00008101511,"about_ca_system_score_gemma":0.01258172,"threshold_uncertainty_score":0.9997158},"labels":[],"label_agreement":null},{"id":"W7098770294","doi":"","title":"and Social Affairs","year":2014,"lang":"en","type":"article","venue":"","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Economic inequality; Population; Personal income; Gross income; Income tax; Inequality; Politics; State income tax","score_opus":0.007480139701729111,"score_gpt":0.25090854459799106,"score_spread":0.24342840489626194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7098770294","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39206964,0.0000046530176,0.00069799885,0.00097411906,0.000028630551,0.000038120852,1.8825631e-7,0.000032207896,0.60615444],"genre_scores_gemma":[0.9937927,0.000001100725,0.00038925663,0.00014882644,0.00005928815,0.0000017564081,0.0000015750862,0.0000020724865,0.0056033833],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99987954,0.0000028862266,0.000021303746,0.00003698869,0.000022484368,0.000036792128],"domain_scores_gemma":[0.99994385,0.000005385146,0.0000038354146,0.00002437431,0.0000073928527,0.000015171014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000017437178,0.000020082103,0.00003904448,0.000011357237,0.00004064466,0.0000023301864,0.0000026737039,0.000014622179,0.00021308324],"category_scores_gemma":[0.0000033794822,0.000013460475,0.000010655073,0.000013142039,0.000014822638,0.000009151243,0.0000042976935,0.00001494531,0.000058431022],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006518457,0.00047574763,0.49197745,0.00006143715,0.00023171838,0.000017099983,0.00085777655,1.3463804e-7,0.0006904827,0.23594436,0.020138185,0.24954043],"study_design_scores_gemma":[0.0050102356,0.0006941692,0.81247365,0.000011436056,0.00018762583,0.00016394956,0.000810871,0.00047037253,0.00106192,0.0027643018,0.17619994,0.00015151467],"about_ca_topic_score_codex":0.00001654978,"about_ca_topic_score_gemma":0.000003682642,"teacher_disagreement_score":0.6017231,"about_ca_system_score_codex":0.000005200892,"about_ca_system_score_gemma":0.0000032447692,"threshold_uncertainty_score":0.23331122},"labels":[],"label_agreement":null},{"id":"W7098790639","doi":"","title":"Maximizing Gravity Recovery through the application of multiple gravity Devices. Vancouver: Gekko Systems","year":2006,"lang":"en","type":"article","venue":"","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Gravity separation; High Gravity; Process (computing); Gravity model of trade; Gravity current; Range (aeronautics)","score_opus":0.012869016507749138,"score_gpt":0.255112526840542,"score_spread":0.24224351033279284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7098790639","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75155526,0.0006794524,0.16495672,0.00022910834,0.00094773096,0.0022750974,0.000048086647,0.00022217451,0.07908634],"genre_scores_gemma":[0.99642247,0.000015466147,0.0016427016,0.00006961228,0.0001228801,0.000087981185,0.000043155982,0.000013354775,0.0015823497],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991447,0.000036039088,0.00028557883,0.00019344468,0.00018401601,0.00015627063],"domain_scores_gemma":[0.9991876,0.000104144565,0.00016076073,0.00039723306,0.00012465335,0.000025636893],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014304023,0.000120644836,0.00023411885,0.000033793705,0.00015411725,0.000011915581,0.000056405883,0.00007369552,0.000016868218],"category_scores_gemma":[0.000017749946,0.000072852854,0.00010687983,0.0002019292,0.000059197333,0.00010464096,0.000025893822,0.00009408769,0.00002982865],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017716693,0.00150066,0.9610644,0.0003521703,0.00043444042,0.000011279735,0.00013455331,0.0014869744,0.001770279,0.012519779,0.011424022,0.009124251],"study_design_scores_gemma":[0.0083661005,0.0007269717,0.78555894,0.00029398862,0.0013147608,0.00019974138,0.0018816286,0.0137832435,0.010740089,0.012406269,0.16400915,0.0007190858],"about_ca_topic_score_codex":0.035850737,"about_ca_topic_score_gemma":0.0051846895,"teacher_disagreement_score":0.2448672,"about_ca_system_score_codex":0.000108743974,"about_ca_system_score_gemma":0.000036261397,"threshold_uncertainty_score":0.9705696},"labels":[],"label_agreement":null},{"id":"W7098962807","doi":"","title":"The Status of Women in the Triangle Metropolitan Area, North Carolina","year":2012,"lang":"en","type":"article","venue":"","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Metropolitan area; Statistical analysis; Population; South carolina; Quarter (Canadian coin)","score_opus":0.021002557343984464,"score_gpt":0.2875847662513274,"score_spread":0.2665822089073429,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7098962807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90498364,0.00035078422,0.000011800174,0.00016131722,0.00006954865,0.00021274172,0.000004207613,0.000007613628,0.094198324],"genre_scores_gemma":[0.9974727,0.000102407386,0.00005042599,0.00009703217,0.000055370365,0.000047346293,0.000005023909,0.000004786216,0.0021648812],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990768,0.0000499502,0.00013724738,0.0000490197,0.00012619323,0.000560802],"domain_scores_gemma":[0.99943393,0.00015296054,0.000035020403,0.0002298407,0.000028379254,0.00011985664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033041128,0.00005866445,0.00013753984,0.000045759833,0.00007382276,0.0000034818474,0.00003886831,0.000020938072,0.00015717029],"category_scores_gemma":[0.00013036131,0.000023518754,0.000048812784,0.000209799,0.000052474326,0.000036123485,0.00001147581,0.000070840244,0.000018704002],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043276315,0.0002790731,0.991832,0.0000038391445,0.000065296124,0.0000022494544,0.0016927108,1.9771458e-7,0.0000038184094,0.0032261957,0.00041784477,0.0024334902],"study_design_scores_gemma":[0.0011186387,0.00023585052,0.96601313,0.0000031202703,0.00003904333,0.000012248897,0.007536995,0.0000070566725,0.00007373765,0.00013262004,0.024798095,0.000029467656],"about_ca_topic_score_codex":0.0028059394,"about_ca_topic_score_gemma":0.00070442737,"teacher_disagreement_score":0.092489064,"about_ca_system_score_codex":0.00056994805,"about_ca_system_score_gemma":0.00006284935,"threshold_uncertainty_score":0.42417598},"labels":[],"label_agreement":null},{"id":"W7100986663","doi":"","title":"82 The Canadian Journal of CME / December 2005 Focus on CME at","year":2015,"lang":"en","type":"article","venue":"","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Foot (prosody); Amputation; Ankle; Psychological intervention; Diabetes mellitus; Diabetic foot","score_opus":0.034724211992722104,"score_gpt":0.2845212256400059,"score_spread":0.24979701364728382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7100986663","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44681978,0.00015523915,0.000037718917,0.0056937826,0.0003704848,0.00012842483,0.0000029199848,0.000007215307,0.5467844],"genre_scores_gemma":[0.9592605,0.0000044890535,0.00014137599,0.00045850297,0.00015463792,0.0000019870715,0.0000014464154,0.0000068187546,0.039970238],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995255,0.000016227086,0.00011199304,0.000050359027,0.00014076404,0.00015519795],"domain_scores_gemma":[0.99933636,0.000022277634,0.000040171733,0.0001420472,0.000120726414,0.00033843837],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001494941,0.000059465012,0.000098921526,0.000067432826,0.000119078104,0.000011381449,0.00003413149,0.000042011514,0.0016002461],"category_scores_gemma":[0.000054019387,0.000028860833,0.000051786225,0.000059424292,0.00004166513,0.000026671833,0.000006680537,0.00009473982,0.00045888752],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014676704,0.0002236353,0.3248831,0.000003895046,0.00039193657,0.00045601855,0.0007434235,0.000035998233,0.000021770627,0.0040323185,0.66121936,0.007841774],"study_design_scores_gemma":[0.007337534,0.0019152932,0.16737571,0.00008319624,0.00043777496,0.003499601,0.00055278867,0.00015833652,0.0028275508,0.00254989,0.8130534,0.00020890737],"about_ca_topic_score_codex":0.043194186,"about_ca_topic_score_gemma":0.46312556,"teacher_disagreement_score":0.51244074,"about_ca_system_score_codex":0.00040210615,"about_ca_system_score_gemma":0.0006044871,"threshold_uncertainty_score":0.9993124},"labels":[],"label_agreement":null},{"id":"W87331292","doi":"10.1155/2014/745130","title":"Invasive Amoebiasis: A Review of<i>Entamoeba</i>Infections Highlighted with Case Reports","year":2014,"lang":"en","type":"review","venue":"Canadian Journal of Gastroenterology and Hepatology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; University of Calgary","funders":"Canadian Institutes of Health Research; Crohn's and Colitis Foundation of Canada","keywords":"Entamoeba histolytica; Entamoeba; Diarrhea; Amoebiasis; Medicine; Abdominal pain; Gastrointestinal tract; Liver abscess; Dysentery; Abscess; Gastroenterology; Parasite hosting; Internal medicine; Pathology; Immunology; Surgery","score_opus":0.016985467968296326,"score_gpt":0.28158397190045037,"score_spread":0.26459850393215406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W87331292","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006380693,0.9916236,0.00008574019,0.000493319,0.0004936611,0.00058306236,0.000039110273,0.0000065793292,0.00029425634],"genre_scores_gemma":[0.011477733,0.98709667,0.00024611736,0.00089175353,0.000116952484,0.00003657236,0.00005079368,0.000036274298,0.000047158217],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99745435,0.000390082,0.0013441865,0.00029613232,0.00008962771,0.000425632],"domain_scores_gemma":[0.9965576,0.00014425485,0.0017598615,0.00035967762,0.0004453661,0.00073321705],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003725484,0.00038406058,0.003433134,0.00086465175,0.00016817289,0.000007060482,0.000059688788,0.00034121764,0.00019647907],"category_scores_gemma":[0.00020926929,0.00026293186,0.0005068072,0.0002180316,0.0004814995,0.000055116077,0.000018083545,0.0006562702,0.0000048765073],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025500843,0.00041554988,0.29845726,0.117049836,0.009437097,0.5065927,0.00010100993,2.9413718e-7,1.413017e-7,0.00025578335,0.012499533,0.054935765],"study_design_scores_gemma":[0.00051893864,0.0031194277,0.00013441323,0.031112835,0.005800635,0.6205553,0.0000074498817,1.5562406e-7,1.7866648e-7,0.000009434407,0.3386673,0.00007395285],"about_ca_topic_score_codex":0.0020524967,"about_ca_topic_score_gemma":0.045131303,"teacher_disagreement_score":0.3261678,"about_ca_system_score_codex":0.00018959689,"about_ca_system_score_gemma":0.0026464178,"threshold_uncertainty_score":0.9999823},"labels":[],"label_agreement":null}]}