{"meta":{"query_hash":"1ab25c096247","filters":{"topic":"Antifungal resistance and susceptibility"},"cohort_total":1787,"direct_labels_cover":4,"predictions_cover":1787,"exported":1787,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/1ab25c096247","api":"https://metacan.xera.ac/api/v1/cohort?topic=Antifungal+resistance+and+susceptibility"},"results":[{"id":"W116275709","doi":"10.1155/2005/759070","title":"Aspergillus‐Related Lung Disease","year":2005,"lang":"en","type":"review","venue":"Canadian Respiratory Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Aspergillus; Lung disease; Lung; Disease; Intensive care medicine; Microbiology; Internal medicine","score_opus":0.0497350079561485,"score_gpt":0.3430994641325711,"score_spread":0.2933644561764226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W116275709","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006807869,0.99133515,0.000004685913,0.00017161951,0.000541143,0.00059312314,0.00012011904,0.00003289729,0.0071331826],"genre_scores_gemma":[0.00027554797,0.9912648,0.000019595316,0.0015771342,0.0014614704,0.000014059265,0.000047160283,0.000110109446,0.0052301036],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967836,0.00027837968,0.0011131864,0.00049524725,0.0004844959,0.00084509206],"domain_scores_gemma":[0.99363244,0.00006181353,0.0003755041,0.00072175043,0.00022882324,0.0049796575],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00072845235,0.00053246954,0.0016504381,0.0007988792,0.00042916395,0.00011195493,0.0003386896,0.0005411487,0.0042518037],"category_scores_gemma":[0.00045772106,0.00042486904,0.0012379045,0.0004489864,0.00016766625,0.00013648599,0.000023660908,0.00212704,0.00065212144],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020352072,0.000028925246,0.0011387621,0.0033430192,0.00028739098,0.005527471,0.000015512798,4.964531e-7,1.238936e-7,0.00014357593,0.028418386,0.96107596],"study_design_scores_gemma":[0.00034452532,0.00004204787,0.0012306226,0.010027009,0.0015694918,0.00052030827,0.000011862563,0.000004153174,2.4881174e-8,0.000017670107,0.98584414,0.000388123],"about_ca_topic_score_codex":0.00026942947,"about_ca_topic_score_gemma":0.008103275,"teacher_disagreement_score":0.9606879,"about_ca_system_score_codex":0.0029785973,"about_ca_system_score_gemma":0.019683942,"threshold_uncertainty_score":0.9998203},"labels":[],"label_agreement":null},{"id":"W119599186","doi":"10.1007/3-540-30809-1_8","title":"Genomic Analysis of Cellular Morphology in Candida albicans","year":2006,"lang":"en","type":"book-chapter","venue":"˜The œmycota","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"","keywords":"Morphology (biology); Candida albicans; Biology; Computational biology; Evolutionary biology; Genetics","score_opus":0.01469251707599405,"score_gpt":0.24276162283530378,"score_spread":0.22806910575930972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W119599186","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38545498,0.0036515219,0.00029062523,0.00022661527,0.00013884321,0.0006084493,0.00029702787,0.000025716217,0.6093062],"genre_scores_gemma":[0.684286,0.00013274515,0.00002051309,0.00016924612,0.00007853343,0.0000042406928,0.00023408029,0.000029482284,0.31504518],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982855,0.00003746775,0.00063043495,0.0004678492,0.00029802552,0.00028076002],"domain_scores_gemma":[0.99843293,0.00011807679,0.0002619984,0.0010263474,0.00008775978,0.00007286803],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031455528,0.00028239764,0.0011371663,0.00041624674,0.00003799203,0.000005479327,0.0002295055,0.00037479596,0.002137016],"category_scores_gemma":[0.000012631675,0.00021133515,0.0005232938,0.00018438927,0.00031550988,0.000012060109,0.00006541967,0.00048418247,0.00006992616],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025469814,0.0007835079,0.77931166,0.0010848513,0.012406221,0.0030594699,0.001301396,0.00070133246,0.12837198,0.035259716,0.029802157,0.0053707445],"study_design_scores_gemma":[0.0021386503,0.00044075312,0.78068197,0.00033113538,0.0140977595,0.000028343013,0.00013963862,0.001246475,0.0003817031,0.0031951729,0.19632061,0.0009977969],"about_ca_topic_score_codex":0.0031984984,"about_ca_topic_score_gemma":0.017278107,"teacher_disagreement_score":0.298831,"about_ca_system_score_codex":0.00021078295,"about_ca_system_score_gemma":0.00020459745,"threshold_uncertainty_score":0.9987752},"labels":[],"label_agreement":null},{"id":"W123834116","doi":"10.1007/bf03017426","title":"Primary cutaneous mucormycosis complicating the use of adhesive tape to secure the endotracheal tube","year":2002,"lang":"en","type":"article","venue":"Canadian Journal of Anesthesia/Journal canadien d anesthésie","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Mucormycosis; Medicine; Dermis; Biopsy; Pathology; Rhizopus; Cheek; Amphotericin B; Dermatology; Surgery; Biology","score_opus":0.03633389841345012,"score_gpt":0.23455189266642734,"score_spread":0.19821799425297723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W123834116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97033614,0.0018604737,0.000027249758,0.026698254,0.00015038144,0.00045680403,0.000015144347,0.000010797716,0.0004447704],"genre_scores_gemma":[0.99593693,0.00017000621,0.00075208675,0.001921583,0.0005772778,0.0000045326824,0.0000027324556,0.0000702426,0.00056463806],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99639404,0.00028399218,0.0012491223,0.00027348095,0.0008350787,0.0009642791],"domain_scores_gemma":[0.99436027,0.0005687024,0.00084936316,0.00064241263,0.0012604428,0.0023187848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010772161,0.00037167416,0.0008404244,0.00039960258,0.00072370685,0.00020360715,0.00084473233,0.0001847747,0.00033431943],"category_scores_gemma":[0.0008575588,0.00022573122,0.0005268891,0.00070455717,0.00050503673,0.00030257882,0.000016637583,0.0014527369,0.000018237037],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011589129,0.00030564883,0.13578679,0.00033871946,0.0008169435,0.69986355,0.019286336,0.0011046289,0.0022929567,0.0007818076,0.102695316,0.035568424],"study_design_scores_gemma":[0.00049898354,0.0012503989,0.05830096,0.00037110932,0.00030766125,0.8974165,0.0015151843,0.00011814553,0.00012888947,0.00006296747,0.03977884,0.00025041308],"about_ca_topic_score_codex":0.0063369838,"about_ca_topic_score_gemma":0.016382635,"teacher_disagreement_score":0.19755292,"about_ca_system_score_codex":0.0009209849,"about_ca_system_score_gemma":0.002221572,"threshold_uncertainty_score":0.9579666},"labels":[],"label_agreement":null},{"id":"W125351941","doi":"10.1007/0-306-46834-4_45","title":"Aspergillus Species as Agents of Community-Acquired Pneumonia","year":2006,"lang":"en","type":"book-chapter","venue":"Kluwer Academic Publishers eBooks","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Alberta","funders":"","keywords":"Aspergillus; Pneumonia; Community-acquired pneumonia; Microbiology; Medicine; Intensive care medicine; Biology; Internal medicine","score_opus":0.05040253206983267,"score_gpt":0.29033993545953674,"score_spread":0.23993740338970407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W125351941","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.035657264,0.0009581732,0.000013569094,0.00048294486,0.0005209507,0.00082311925,0.00012684443,0.00018630322,0.9612308],"genre_scores_gemma":[0.28810698,0.0000694323,0.000036297864,0.0011630208,0.00035780482,0.0000124022745,0.0003121254,0.00013200793,0.70980996],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99587756,0.00012861846,0.0013927377,0.0005880506,0.0013392228,0.0006738236],"domain_scores_gemma":[0.9965684,0.00022325962,0.0007454492,0.0015787049,0.00048966944,0.00039454692],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00096465286,0.000786502,0.0015905313,0.00046365042,0.00024741894,0.00009402999,0.00093825354,0.001997795,0.0016182805],"category_scores_gemma":[0.00032804644,0.00073749264,0.00070496777,0.00006267023,0.0012508852,0.00035367254,0.00039942688,0.0035941994,0.00015227956],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012303995,0.00021232075,0.0064117336,0.0017788996,0.0012808006,0.00027221395,0.0023639314,0.0000025172776,0.015012077,0.03223022,0.92391956,0.015285333],"study_design_scores_gemma":[0.0015271427,0.00037801164,0.01629911,0.0010745331,0.0005961284,0.00006535053,0.00044959105,0.000004155949,0.000931688,0.014147736,0.96374035,0.0007862135],"about_ca_topic_score_codex":0.00032778765,"about_ca_topic_score_gemma":0.00006002275,"teacher_disagreement_score":0.25244972,"about_ca_system_score_codex":0.00046731214,"about_ca_system_score_gemma":0.00060340436,"threshold_uncertainty_score":0.9995076},"labels":[],"label_agreement":null},{"id":"W129387772","doi":"10.1155/2000/678043","title":"Graft-Versus-Host Disease after Liver Transplantation Complicated by Systemic Aspergillosis with Pancarditis","year":2000,"lang":"en","type":"article","venue":"Canadian Journal of Gastroenterology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Alberta; Health Sciences Centre","funders":"","keywords":"Medicine; Rash; Transplantation; Aspergillosis; Liver transplantation; Complication; Pancytopenia; Surgery; Gastroenterology; Internal medicine; Immunology; Bone marrow","score_opus":0.0075089265931375295,"score_gpt":0.2074561786296379,"score_spread":0.19994725203650035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W129387772","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99627835,0.001227277,0.00029792977,0.0015026202,0.00009746174,0.0001497422,0.00022852603,0.000006627945,0.00021147709],"genre_scores_gemma":[0.99793214,0.0008864152,0.00007174013,0.00077582145,0.00007950578,0.0000064031583,0.000038105452,0.000017098688,0.0001927671],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989006,0.00009573484,0.00031273454,0.00017386011,0.00015601543,0.00036108764],"domain_scores_gemma":[0.99861336,0.000021414187,0.00009425059,0.00016951577,0.00015149181,0.0009499583],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000936347,0.00014273245,0.00035347283,0.000116120755,0.00006148709,0.000014483528,0.000092652685,0.000057967736,0.0010577147],"category_scores_gemma":[0.000010032454,0.000114180075,0.00013264922,0.00007615969,0.00019910415,0.00010149562,0.0000014237875,0.0002143375,0.000027207545],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.027481502,0.000048182355,0.96191764,0.00016028811,0.00022440906,0.0057295104,0.00019407138,0.000012601115,0.00035377088,0.0000042007196,0.0031629521,0.000710881],"study_design_scores_gemma":[0.0037845478,0.00228211,0.9879645,0.0003888434,0.0005255239,0.0023940222,0.000079218866,0.000019428799,0.000030387988,0.000003388449,0.0024428219,0.00008519973],"about_ca_topic_score_codex":0.00061519875,"about_ca_topic_score_gemma":0.014544215,"teacher_disagreement_score":0.026046876,"about_ca_system_score_codex":0.00017334151,"about_ca_system_score_gemma":0.00028223716,"threshold_uncertainty_score":0.99985546},"labels":[],"label_agreement":null},{"id":"W1473445822","doi":"","title":"Pediatric antifungal therapy. Part II: neonatal infections.","year":2010,"lang":"en","type":"article","venue":"PubMed","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Pediatrics; Anthropometry; Population; Neonatal intensive care unit; Clinical Practice; Fetal growth; Intensive care medicine; Pregnancy; Fetus; Family medicine","score_opus":0.019163224790247436,"score_gpt":0.24205095078149486,"score_spread":0.22288772599124743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1473445822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885226,0.00044531655,0.000016415628,0.00046593495,0.0010524363,0.0006640881,0.000009781023,0.00014146029,0.0086819725],"genre_scores_gemma":[0.99327135,0.00032207163,0.000055960856,0.0003311818,0.0012351132,0.0003229958,0.000016947019,0.00001828944,0.004426112],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988278,0.000017849894,0.00021454385,0.00029276244,0.00025714823,0.00038986065],"domain_scores_gemma":[0.99916637,0.000048284233,0.000052860167,0.00040205228,0.00010316065,0.00022730054],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039005734,0.00013354492,0.00020268951,0.00009269274,0.00019242681,0.000022703469,0.00008118239,0.00013089772,0.00049492257],"category_scores_gemma":[0.00028434742,0.00010728784,0.00013557896,0.00028634703,0.000091492686,0.00012390962,0.00003872108,0.00045239384,0.000063009],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106918174,0.0002486689,0.89439845,0.000020840396,0.000021459276,0.000015954067,0.000041161027,8.506142e-8,0.00026180793,0.00017597212,0.005872781,0.09883592],"study_design_scores_gemma":[0.0007402329,0.00006190459,0.89993024,0.000001330885,0.000031671483,0.000025019624,0.000012581927,0.0000028914785,0.00095672003,0.000079966856,0.0980518,0.00010562665],"about_ca_topic_score_codex":0.000021078771,"about_ca_topic_score_gemma":0.000079915684,"teacher_disagreement_score":0.098730296,"about_ca_system_score_codex":0.000022180808,"about_ca_system_score_gemma":0.000079999736,"threshold_uncertainty_score":0.5419055},"labels":[],"label_agreement":null},{"id":"W1483639472","doi":"10.1111/j.1439-0507.2012.02182.x","title":"New insights into hepatosplenic candidosis, a manifestation of chronic disseminated candidosis","year":2012,"lang":"en","type":"review","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"","keywords":"Medicine; Immunology; Context (archaeology); Immune system; Neutropenia; Adjuvant; Pathogenesis; Antifungal; Intensive care medicine; Chemotherapy; Dermatology; Internal medicine; Biology","score_opus":0.03297301269479738,"score_gpt":0.33956612277696085,"score_spread":0.3065931100821635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1483639472","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0034991186,0.9944812,0.000071348506,0.00001565535,0.000254672,0.0009874774,0.000035156318,0.000061677165,0.00059371634],"genre_scores_gemma":[0.08686629,0.9097039,0.00013242441,0.000014941775,0.00036656036,0.00005626155,0.0005758434,0.000065891625,0.0022178728],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99767023,0.00013076319,0.000885758,0.00048116848,0.00042842177,0.00040363963],"domain_scores_gemma":[0.9981288,0.00022057681,0.0004981519,0.0006956209,0.00012972906,0.00032712152],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017202173,0.0004926131,0.0020982209,0.00025606115,0.00008358993,0.000016450476,0.000200159,0.00041133817,0.00052836526],"category_scores_gemma":[0.00013906855,0.00036171067,0.0005777323,0.0005601665,0.00009019445,0.00012502848,0.00006745298,0.0003766754,0.000116303054],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056942037,0.00019563161,0.001748858,0.048882313,0.0003479811,0.000029862395,0.00047268887,3.579747e-8,0.00007138252,0.00011401593,0.002705994,0.9453743],"study_design_scores_gemma":[0.00044134053,0.00034258227,0.0026201517,0.023979643,0.0042070244,0.00003356061,0.00006671816,0.000004570852,0.00022511269,0.000048910646,0.9676053,0.00042506805],"about_ca_topic_score_codex":0.002341751,"about_ca_topic_score_gemma":0.002396814,"teacher_disagreement_score":0.9648993,"about_ca_system_score_codex":0.0007667028,"about_ca_system_score_gemma":0.0017174332,"threshold_uncertainty_score":0.9998835},"labels":[],"label_agreement":null},{"id":"W1487933470","doi":"10.1111/tid.12454","title":"Voriconazole therapeutic drug monitoring: results of a prematurely discontinued randomized multicenter trial","year":2015,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Institutes of Health; Pfizer","keywords":"Medicine; Therapeutic drug monitoring; Randomized controlled trial; Dosing; Adverse effect; Voriconazole; Incidence (geometry); Clinical trial; Internal medicine; Surgery; Pharmacokinetics","score_opus":0.027147589409402293,"score_gpt":0.2922206987997084,"score_spread":0.2650731093903061,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1487933470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931795,0.0009801717,0.00033651228,0.00024679652,0.00067480374,0.0020740519,0.00015555338,0.00012398818,0.0022286386],"genre_scores_gemma":[0.9983353,0.00017783853,0.000034603196,0.000058767015,0.00027015407,0.00009343241,0.00007355345,0.00002362847,0.0009327332],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99798936,0.0002780572,0.00065195264,0.0003379435,0.0004639028,0.000278794],"domain_scores_gemma":[0.9984005,0.0003249866,0.00017958079,0.0004180874,0.00019531949,0.00048149825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007939749,0.00023462775,0.0007899762,0.0000879586,0.00004732882,0.000019232699,0.00009034703,0.00007724381,0.000019212113],"category_scores_gemma":[0.00041693967,0.00016582404,0.00046284235,0.00014127042,0.00017281272,0.00010774837,0.0000094568095,0.0002152332,0.000019311812],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.87020916,0.0012757977,0.1255916,0.00027378046,0.00023106736,0.00006774078,0.0013816961,0.000011735177,0.00055334874,0.00009924014,0.00014395485,0.00016087978],"study_design_scores_gemma":[0.9025324,0.0003293426,0.09230053,0.00042310235,0.0014657881,0.000005386907,0.00011606097,0.00020969904,0.0018433331,0.00040190227,0.00014287938,0.00022958503],"about_ca_topic_score_codex":0.00015426475,"about_ca_topic_score_gemma":0.00002507805,"teacher_disagreement_score":0.033291083,"about_ca_system_score_codex":0.000061762104,"about_ca_system_score_gemma":0.0002503902,"threshold_uncertainty_score":0.67621076},"labels":[],"label_agreement":null},{"id":"W1489251622","doi":"10.1111/j.1600-6143.2012.04042.x","title":"Risk Factors for Voriconazole Hepatotoxicity at 12 Weeks in Lung Transplant Recipients","year":2012,"lang":"en","type":"article","venue":"American Journal of Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Ontario Institute for Cancer Research; University of Toronto","funders":"Astellas Pharma; Pfizer","keywords":"Voriconazole; Medicine; Internal medicine; Lung transplantation; Univariate analysis; Liver transplantation; Azathioprine; Aspergillosis; Transplantation; Gastroenterology; Retrospective cohort study; Discontinuation; Cystic fibrosis; Lung; Surgery; Disease; Immunology; Multivariate analysis; Antifungal; Dermatology","score_opus":0.01591353309272938,"score_gpt":0.28740437161808785,"score_spread":0.2714908385253585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1489251622","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9889889,0.00016488966,0.010056404,0.000066832166,0.00023513478,0.0002626926,0.0001258331,0.00000838258,0.000090975846],"genre_scores_gemma":[0.9976004,0.0011510187,0.0009627409,0.00006305423,0.00011377484,0.0000049272417,0.000049384624,0.000015755195,0.000038981176],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99860936,0.00010594646,0.00053813786,0.00012640293,0.00030514842,0.0003150242],"domain_scores_gemma":[0.9989129,0.00029766202,0.0003899425,0.0001018018,0.00008557706,0.00021215176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059243356,0.00014270683,0.0004321002,0.00016768463,0.00007015276,0.000005604849,0.00007112394,0.00005144971,0.00003438336],"category_scores_gemma":[0.00005474499,0.00011193148,0.00021726795,0.00017027347,0.000090204136,0.00024792654,0.0000021096025,0.00022686597,0.0000022670588],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039048346,0.00023553733,0.98342276,0.000091156624,0.00006997223,0.000014420737,0.004053496,0.000021002064,0.006041944,0.000008848145,0.000034134435,0.0021018821],"study_design_scores_gemma":[0.0017712238,0.00063851837,0.9865979,0.00017085309,0.0003278123,0.00007857403,0.0004967201,0.00010460441,0.009633862,0.00001282943,0.0000539652,0.00011312931],"about_ca_topic_score_codex":0.00015866711,"about_ca_topic_score_gemma":0.00017817762,"teacher_disagreement_score":0.009093664,"about_ca_system_score_codex":0.00022175656,"about_ca_system_score_gemma":0.000056829926,"threshold_uncertainty_score":0.4564433},"labels":[],"label_agreement":null},{"id":"W1492084608","doi":"10.1002/9781444345148.ch26","title":"Percutaneous Instillation of Chemolytic, Chemotherapeutic, and Antifungal Agents","year":2012,"lang":"en","type":"other","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Medicine; Percutaneous; Antifungal; Adjuvant; Surgery; Internal medicine; Dermatology","score_opus":0.022701829800751347,"score_gpt":0.2886256748733141,"score_spread":0.2659238450725627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1492084608","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03803168,0.0026217354,0.000095412935,0.000075710646,0.00012374957,0.00047050687,0.000022406371,0.00009905645,0.95845973],"genre_scores_gemma":[0.5049968,0.0005717421,0.0006903666,0.00014841207,0.00012950804,6.511626e-7,0.000022372158,0.00012981347,0.49331036],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990686,0.000014343591,0.00022131341,0.00025376238,0.00024531796,0.00019663376],"domain_scores_gemma":[0.99936044,0.000022071095,0.00012878749,0.00033116757,0.000041980802,0.000115538816],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009098686,0.00020933748,0.00050186156,0.00010910083,0.000015849799,0.0000053523486,0.000044307744,0.0003208908,0.011999077],"category_scores_gemma":[0.00002942687,0.00016610738,0.00008613527,0.00007205055,0.00015006264,0.000021782102,0.000025560308,0.00013691492,0.000065483655],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009444107,0.001069841,0.45264587,0.007140388,0.0013012161,0.000094563955,0.00073947565,1.379384e-7,0.067696355,0.0012104375,0.379585,0.08757229],"study_design_scores_gemma":[0.0021287322,0.00038004047,0.18600583,0.00131061,0.0010542244,0.00056194706,0.0002700327,0.0001599426,0.007153323,0.000060830043,0.8000665,0.0008480052],"about_ca_topic_score_codex":0.000082282306,"about_ca_topic_score_gemma":0.000036749458,"teacher_disagreement_score":0.4669651,"about_ca_system_score_codex":0.000029326602,"about_ca_system_score_gemma":0.000055959856,"threshold_uncertainty_score":0.9889041},"labels":[],"label_agreement":null},{"id":"W1497306473","doi":"10.1128/9781555815776.ch13","title":"Molecular Basis of Fungal Adherence to Endothelial and Epithelial Cells","year":2014,"lang":"en","type":"book-chapter","venue":"ASM Press eBooks","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Basis (linear algebra); Biology; Microbiology; Computational biology; Cell biology; Chemistry; Mathematics","score_opus":0.026598135174921482,"score_gpt":0.26329184727047494,"score_spread":0.23669371209555345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1497306473","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.036038667,0.00047038402,0.00078432553,0.000024919285,0.0002509982,0.0010655676,0.00044651845,0.00005343657,0.9608652],"genre_scores_gemma":[0.5107359,0.000065869826,0.0004199819,0.00023789232,0.00019021535,0.000011686111,0.000007503475,0.0000634215,0.4882675],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981733,0.000033523535,0.0004696313,0.0005773537,0.00047008425,0.00027613316],"domain_scores_gemma":[0.9985336,0.0001034905,0.00019314534,0.00071798405,0.00018275762,0.00026901302],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021022708,0.00036907158,0.0008145651,0.00008745751,0.000039161754,0.000016362774,0.00017316687,0.00036035973,0.00011010902],"category_scores_gemma":[0.000059086997,0.00032989902,0.00023311007,0.000005128886,0.00025290233,0.00001384087,0.00014395686,0.00036002503,0.00003854841],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028717897,0.00007317774,0.00024169838,0.0023068239,0.00060653285,0.00040196948,0.0009705524,0.000002923848,0.6755777,0.1972302,0.0023192435,0.117397375],"study_design_scores_gemma":[0.0015918103,0.0017176607,0.0003441543,0.0011539423,0.0006648704,0.000024381592,0.000014967581,0.00001445723,0.74859875,0.0024421168,0.24276435,0.0006685546],"about_ca_topic_score_codex":0.0001475061,"about_ca_topic_score_gemma":0.00003449205,"teacher_disagreement_score":0.47469723,"about_ca_system_score_codex":0.000028806973,"about_ca_system_score_gemma":0.00011435839,"threshold_uncertainty_score":0.9999153},"labels":[],"label_agreement":null},{"id":"W1499717749","doi":"10.1128/9781555815592.ch19","title":"Non-<i>albicans Candida</i> Infections","year":2014,"lang":"en","type":"book-chapter","venue":"ASM Press eBooks","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Candida albicans; Corpus albicans; Microbiology; Biology; Virulence; Candida glabrata; Fungemia; Antifungal; Medicine; Genetics","score_opus":0.023573428714131484,"score_gpt":0.26475216576195193,"score_spread":0.24117873704782045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1499717749","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006646455,0.00026281163,0.00042751047,0.00005135105,0.00032073952,0.0006441268,0.000054072072,0.00014098802,0.9974338],"genre_scores_gemma":[0.15822051,0.0000941047,0.000049812905,0.000444101,0.0005114761,0.000036135396,0.000048400558,0.000084724576,0.8405107],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983111,0.000013823135,0.00040815398,0.0005488582,0.0003860875,0.0003319571],"domain_scores_gemma":[0.9983276,0.00008417906,0.00017364202,0.000970842,0.00018054398,0.00026320587],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015683724,0.00039981937,0.00070763053,0.000093472896,0.00013808737,0.000029757553,0.00014272137,0.00050883496,0.0002668618],"category_scores_gemma":[0.00003776154,0.0003548918,0.0003598157,0.0000056099248,0.00026913435,0.000019648553,0.000085079206,0.00074448093,0.00017786323],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010014905,0.00026036167,0.005393692,0.0029664407,0.0020417648,0.0005336532,0.0011790927,0.0000045722654,0.0032419057,0.6521548,0.27747682,0.05374537],"study_design_scores_gemma":[0.0006343634,0.00028341007,0.0008595925,0.000525419,0.0004504943,0.000029878594,0.0000035859393,0.000011530218,0.00065553427,0.0016826703,0.99449146,0.00037206057],"about_ca_topic_score_codex":0.0005619742,"about_ca_topic_score_gemma":0.0006551418,"teacher_disagreement_score":0.7170146,"about_ca_system_score_codex":0.000106910884,"about_ca_system_score_gemma":0.00023327996,"threshold_uncertainty_score":0.9998903},"labels":[],"label_agreement":null},{"id":"W1501276480","doi":"10.1111/j.1469-0691.2005.01349.x","title":"Comparison of three methodologies for the determination of pulmonary fungal burden in experimental murine aspergillosis","year":2006,"lang":"en","type":"article","venue":"Clinical Microbiology and Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":69,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Galactomannan; Aspergillosis; Pulmonary aspergillosis; Aspergillus; Immunoassay; Biology; Microbiology; Quantitative analysis (chemistry); Real-time polymerase chain reaction; Aspergillus fumigatus; Mycosis; Immunology; Chemistry; Chromatography; Biochemistry; Gene","score_opus":0.1259558662750756,"score_gpt":0.445742659501192,"score_spread":0.3197867932261164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1501276480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99394226,0.001233305,0.004104783,0.00012784582,0.0001500455,0.00030460086,0.0000061563874,0.0000076162974,0.0001233934],"genre_scores_gemma":[0.99861515,0.00008795537,0.0011327687,0.000019699804,0.000078259,0.00001353238,0.000020308078,0.0000032485136,0.000029079294],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99911,0.00012536424,0.00051037344,0.0001543333,0.000017277736,0.000082688406],"domain_scores_gemma":[0.99844986,0.0012226176,0.00015244544,0.00010389931,0.000060781596,0.000010368073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075259065,0.00006440335,0.00034526028,0.000038599475,0.00003742764,0.000001220398,0.000028082453,0.00017520764,0.000015597596],"category_scores_gemma":[0.00038524705,0.00004247323,0.00010776993,0.00005701427,0.00039790454,0.000029091623,0.000025778476,0.00012322434,4.4469985e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060603797,0.00021363686,0.7110362,0.000045096825,0.000011274169,2.4307914e-7,0.000017052766,0.0000032568582,0.2756597,0.0000777543,0.000029913355,0.012299827],"study_design_scores_gemma":[0.00061506766,0.0007596927,0.8943679,0.00002947359,0.00004823411,0.0000082693805,0.00008878695,0.00060410064,0.10294571,0.00030012292,0.00019474627,0.000037908154],"about_ca_topic_score_codex":0.00014648434,"about_ca_topic_score_gemma":0.00020247487,"teacher_disagreement_score":0.18333168,"about_ca_system_score_codex":0.000014851657,"about_ca_system_score_gemma":0.000014367628,"threshold_uncertainty_score":0.1732008},"labels":[],"label_agreement":null},{"id":"W1503938960","doi":"10.1046/j.1365-2958.2003.03697.x","title":"Large‐scale essential gene identification in <i>Candida albicans</i> and applications to antifungal drug discovery","year":2003,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":523,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Toronto; Concordia University; Eli Lilly (Canada)","funders":"Natural Sciences and Engineering Research Council of Canada; Burroughs Wellcome Fund","keywords":"Candida albicans; Biology; Corpus albicans; Gene; Antifungal drug; Computational biology; Phenotype; Genetics; Virulence; Mutant; Phenotypic screening","score_opus":0.003945229214726357,"score_gpt":0.24862680398093748,"score_spread":0.2446815747662111,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1503938960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9508891,0.0007372975,0.04675052,0.00033745708,0.00006638441,0.0006392265,0.0000725763,0.00001940105,0.0004880186],"genre_scores_gemma":[0.99702203,0.00005287766,0.0006717454,0.00091118366,0.000027024806,0.00007203108,0.00017930879,0.000016583384,0.0010471845],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871004,0.00011905358,0.000298587,0.0005067868,0.000054572054,0.00031097553],"domain_scores_gemma":[0.99939436,0.00002444801,0.000050571973,0.00038006628,0.00005566448,0.00009489969],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029334272,0.00013848548,0.00026792535,0.000109094246,0.0000687744,0.000024252435,0.00007650251,0.00010187695,0.00004806151],"category_scores_gemma":[0.00005073684,0.0001345122,0.000065089625,0.00025892412,0.00010869263,0.00005316411,0.000041583564,0.00014572582,0.00003944175],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006554168,0.00016600196,0.030677209,0.000032694323,0.00001684149,0.00002511033,0.00015089485,0.0000032765445,0.96768135,0.0008059378,0.00026231978,0.00011280189],"study_design_scores_gemma":[0.0014155606,0.000071109884,0.050486106,0.00003256797,0.000072715346,0.00014155323,0.00045053964,0.000006527414,0.911752,0.00031680326,0.0349777,0.00027680708],"about_ca_topic_score_codex":0.000026385766,"about_ca_topic_score_gemma":0.00026629856,"teacher_disagreement_score":0.055929363,"about_ca_system_score_codex":0.000053636548,"about_ca_system_score_gemma":0.00007560879,"threshold_uncertainty_score":0.5485248},"labels":[],"label_agreement":null},{"id":"W1512804344","doi":"10.1155/2007/768734","title":"Treatment of Candiduria with Micafungin: A Case Series","year":2006,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Regional Laboratory Medicine Program; McMaster University","funders":"","keywords":"Series (stratigraphy); Micafungin; Medicine; Geology; Dermatology; Antifungal","score_opus":0.003917042915767389,"score_gpt":0.21799182280101712,"score_spread":0.21407477988524973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1512804344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931109,0.005651666,0.00003899627,0.0006698894,0.0001007633,0.00009940987,0.00009787443,0.0000037068046,0.00022678587],"genre_scores_gemma":[0.9992785,0.00026920837,0.000034967503,0.000117866104,0.00015101739,0.0000015583425,0.000013540472,0.0000067471137,0.0001266175],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99933743,0.000036719528,0.0002716557,0.00010360496,0.000046842222,0.00020374295],"domain_scores_gemma":[0.99890125,0.000049311515,0.00010772038,0.00008532544,0.00015064774,0.0007057685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004926092,0.0001048237,0.00038410988,0.00011841641,0.00006716942,0.0000057011343,0.000025164423,0.00009500225,0.00024692042],"category_scores_gemma":[0.00008600207,0.00006479782,0.00009353633,0.00007670678,0.000521562,0.000028660228,0.000002744862,0.00007728586,7.610374e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038994369,0.00017458695,0.975908,0.00008212727,0.00015295851,0.018308027,0.00008131594,8.0335445e-7,0.0014019236,0.00028337122,0.000716996,0.0024999643],"study_design_scores_gemma":[0.009584109,0.013914372,0.392072,0.00044931014,0.0011148759,0.5395742,0.000676809,0.000004449137,0.0008443789,0.00044502507,0.041010156,0.000310293],"about_ca_topic_score_codex":0.013885715,"about_ca_topic_score_gemma":0.12845212,"teacher_disagreement_score":0.58383596,"about_ca_system_score_codex":0.000129608,"about_ca_system_score_gemma":0.0019215622,"threshold_uncertainty_score":0.9926809},"labels":[],"label_agreement":null},{"id":"W1518372890","doi":"10.1155/2008/634046","title":"Epidemiology and Antifungal Susceptibility of Bloodstream <i>Candida</i> Isolates in Quebec: Report on 453 Cases between 2003 and 2005","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; McGill University Health Centre; Centre hospitalier universitaire de Québec; Hôpital Maisonneuve-Rosemont; Institut National de Santé Publique du Québec","funders":"","keywords":"Fluconazole; Voriconazole; Itraconazole; Candida parapsilosis; Caspofungin; Fungemia; Microbiology; Candida tropicalis; Candida glabrata; Candida krusei; Population; Posaconazole; Candida albicans; Medicine; Amphotericin B; Biology; Internal medicine; Antifungal","score_opus":0.011150879185744178,"score_gpt":0.28386613067338723,"score_spread":0.27271525148764303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1518372890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988499,0.010143012,0.00004871277,0.0007499367,0.000168258,0.00017703277,0.000098296514,0.0000048441343,0.00011094263],"genre_scores_gemma":[0.9979162,0.001046734,0.000032733722,0.00071723294,0.0001709246,7.6731857e-7,0.000024262074,0.000009410393,0.00008171433],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99797875,0.00019591098,0.00095122936,0.00030973376,0.00006278557,0.0005015659],"domain_scores_gemma":[0.9966888,0.00104015,0.00032352482,0.0001649742,0.00020855012,0.0015740147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017392524,0.00018340535,0.0009128242,0.00029987268,0.00007964821,0.0000052283685,0.000054337317,0.00031658832,0.00012790626],"category_scores_gemma":[0.0071656047,0.00014048812,0.00008729322,0.00015465409,0.0013314942,0.000052929474,0.000019446657,0.00043816757,5.3741906e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002645964,0.00010154676,0.9883861,0.0001429078,0.000085919426,0.0018833098,0.000052114974,1.8563497e-7,0.00071523065,0.00006548653,0.0008179931,0.0074846135],"study_design_scores_gemma":[0.001457559,0.0011217967,0.9891427,0.0003387579,0.000151677,0.005290774,0.00015840514,0.0000013574564,0.00014639247,0.00013566528,0.0019384018,0.000116519266],"about_ca_topic_score_codex":0.04202941,"about_ca_topic_score_gemma":0.43919298,"teacher_disagreement_score":0.39716357,"about_ca_system_score_codex":0.00012915223,"about_ca_system_score_gemma":0.0016011149,"threshold_uncertainty_score":0.9643498},"labels":[],"label_agreement":null},{"id":"W1521075280","doi":"10.1002/9780470057414.ch9","title":"Microarrays for Studying Pathogenicity in <i>Candida Albicans</i>","year":2006,"lang":"en","type":"other","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Candida albicans; DNA microarray; Microarray; Pathogenicity; Corpus albicans; Computational biology; Biology; Oligonucleotide; Microarray analysis techniques; Microbiology; DNA; Genetics; Gene; Gene expression","score_opus":0.014239482566535648,"score_gpt":0.29777051920859277,"score_spread":0.28353103664205714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1521075280","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.045861244,0.008264214,0.005192401,0.004026913,0.002059258,0.005454211,0.00041051974,0.00043189852,0.92829937],"genre_scores_gemma":[0.19174445,0.0007442188,0.0026239825,0.0076985075,0.002726385,0.00057025545,0.00062720914,0.00069172605,0.7925733],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99774086,0.000118465134,0.0005009838,0.0006299667,0.00042982318,0.00057991006],"domain_scores_gemma":[0.9988568,0.00032607652,0.00013858436,0.00038766096,0.000040461928,0.00025043456],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00065231975,0.00028849562,0.0010335564,0.00022727592,0.000035435896,0.0000046649725,0.00020342923,0.0011391168,0.0044209994],"category_scores_gemma":[0.00076112506,0.00024087632,0.00020838832,0.00017472114,0.00032575915,0.000008618258,0.000060687817,0.0006308814,0.00004473485],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034343143,0.000604178,0.088627666,0.000595711,0.00008296121,0.00047289356,0.000041708638,7.6601665e-8,0.00073231175,0.00014955405,0.9022811,0.006068381],"study_design_scores_gemma":[0.0037864395,0.0004336136,0.035731662,0.0004984562,0.00013601543,0.000035042918,0.000057044952,0.000018208455,0.000037584225,0.00016691316,0.9588197,0.0002793172],"about_ca_topic_score_codex":0.00090496853,"about_ca_topic_score_gemma":0.019291203,"teacher_disagreement_score":0.1458832,"about_ca_system_score_codex":0.0001554057,"about_ca_system_score_gemma":0.0005748999,"threshold_uncertainty_score":0.9986042},"labels":[],"label_agreement":null},{"id":"W1543430239","doi":"10.1111/j.1365-2958.2012.08193.x","title":"Functional control of the <i><scp>C</scp>andida albicans</i> cell wall by catalytic protein kinase <scp>A</scp> subunit <scp>Tpk</scp>1","year":2012,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; National University of Ireland","keywords":"Biology; Protein subunit; Cell; Candida albicans; Cell wall; Kinase; Fungal protein; Gene; Mutant; Cell biology; Molecular biology; Biochemistry; Microbiology","score_opus":0.0067561396607902485,"score_gpt":0.2043613176944673,"score_spread":0.19760517803367705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1543430239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9819896,0.00803923,0.0020996905,0.00023447345,0.00036900086,0.0016938931,0.0004435857,0.00007584649,0.0050546755],"genre_scores_gemma":[0.9818938,0.00004479122,0.000118617594,0.0029865147,0.00015258728,0.00010501214,0.0005936004,0.00008628709,0.0140188355],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99619675,0.00053428166,0.00081627426,0.00078455155,0.00032331413,0.001344811],"domain_scores_gemma":[0.99669045,0.0008693609,0.00045994608,0.0012035462,0.00037011612,0.00040657687],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007965081,0.00059582695,0.0009698992,0.00014554456,0.00023122336,0.000024830868,0.00050571904,0.0006200946,0.00006707084],"category_scores_gemma":[0.0017821067,0.00045351192,0.00057479966,0.000453984,0.0008844525,0.000112125505,0.00019224396,0.00083599996,0.00031295716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030183091,0.0006755105,0.04258737,0.00023195615,0.0002241218,0.000032194235,0.0003560544,0.000005847069,0.90123576,0.00020693573,0.054370306,0.000043780776],"study_design_scores_gemma":[0.0032555058,0.0004092162,0.010364535,0.00008945815,0.0003880006,0.00010902659,0.0004871512,0.000014411598,0.77347445,0.000096754484,0.2112428,0.00006871163],"about_ca_topic_score_codex":0.00018804286,"about_ca_topic_score_gemma":0.00004430345,"teacher_disagreement_score":0.15687248,"about_ca_system_score_codex":0.00018413347,"about_ca_system_score_gemma":0.0003550478,"threshold_uncertainty_score":0.9997917},"labels":[],"label_agreement":null},{"id":"W1548391648","doi":"10.1111/ajt.12115","title":"Aspergillosis in Solid Organ Transplantation","year":2013,"lang":"en","type":"article","venue":"American Journal of Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":194,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Canadian Society of Transplantation; Astellas Pharma; U.S. Food and Drug Administration; American Society of Transplantation; Pfizer","keywords":"Medicine; Aspergillosis; Organ transplantation; Solid organ; Transplantation; Mortality rate; Complication; Internal medicine; Surgery; Intensive care medicine; Immunology","score_opus":0.006941441531010647,"score_gpt":0.26911401075170405,"score_spread":0.2621725692206934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1548391648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993711,0.00005763201,0.004598941,0.0008372403,0.00006237232,0.00015273548,0.0000054947554,0.000009154724,0.00056541344],"genre_scores_gemma":[0.9957585,0.0017604488,0.0020650218,0.00029105437,0.00005757938,0.0000034279426,0.000016870887,0.000012141701,0.000034986573],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988356,0.000070492526,0.00050683256,0.000114542774,0.00028748068,0.00018501616],"domain_scores_gemma":[0.9993098,0.000078399265,0.00022008149,0.00008646227,0.00019280915,0.0001124505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023516754,0.00010267512,0.00033163468,0.0002227288,0.000029696537,0.000013889489,0.000063534615,0.00003459306,0.00018327906],"category_scores_gemma":[0.00002151564,0.00008331502,0.000106865,0.00033618373,0.00010086431,0.0003031621,0.0000010502912,0.00019799024,0.000026262653],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021756063,0.00029561014,0.78306586,0.0002920309,0.00009289343,0.0003767939,0.004729114,0.00009829522,0.14487463,0.000061911946,0.00008627268,0.06385098],"study_design_scores_gemma":[0.0013845884,0.00079509616,0.9820693,0.00026026575,0.00014550854,0.00045054097,0.0011643528,0.000063813924,0.013464855,0.00009630407,0.000014119806,0.00009123955],"about_ca_topic_score_codex":0.00023987309,"about_ca_topic_score_gemma":0.00011446339,"teacher_disagreement_score":0.19900346,"about_ca_system_score_codex":0.000064257096,"about_ca_system_score_gemma":0.000091135444,"threshold_uncertainty_score":0.3397488},"labels":[],"label_agreement":null},{"id":"W1585995067","doi":"10.1111/ajt.12118","title":"Emerging Fungal Infections in Solid Organ Transplantation","year":2013,"lang":"en","type":"article","venue":"American Journal of Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Society of Transplantation; Astellas Pharma; Gilead Sciences; American Society of Transplantation","keywords":"Mucorales; Microbiology; Fusarium; Trichosporon; Transplantation; Organ transplantation; Mucormycosis; Medicine; Biology; Yeast; Pathology; Botany","score_opus":0.006875221381288387,"score_gpt":0.2808197249717706,"score_spread":0.2739445035904822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1585995067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98545206,0.000050875806,0.013001522,0.00069839315,0.00010110361,0.00016398952,0.0000054037173,0.000013813863,0.0005128643],"genre_scores_gemma":[0.99723166,0.0012753959,0.0011716187,0.00017339856,0.000081799946,0.0000048223174,0.00001628557,0.0000128523825,0.00003215498],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99881226,0.00008025558,0.0005263509,0.000117502605,0.00026211192,0.00020154798],"domain_scores_gemma":[0.99927104,0.000091264104,0.00023395201,0.000083869425,0.00020702765,0.000112880734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025687934,0.000107428656,0.0003056371,0.00030371625,0.000053623222,0.000017113412,0.000052667587,0.0000345696,0.00016472893],"category_scores_gemma":[0.000028195665,0.00009240996,0.0001100956,0.00044030233,0.00009561921,0.00038157948,0.000001274332,0.000262479,0.000021722579],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090686756,0.00029743474,0.87595165,0.00021062141,0.00007423601,0.0002464166,0.004411559,0.00025338167,0.06755809,0.000053567313,0.00005853865,0.049977656],"study_design_scores_gemma":[0.0015094933,0.0009359413,0.9884311,0.00028154574,0.00017051566,0.0011313636,0.0016058388,0.00013287121,0.005564039,0.0001021537,0.000027310432,0.00010782237],"about_ca_topic_score_codex":0.0002900477,"about_ca_topic_score_gemma":0.00023888136,"teacher_disagreement_score":0.11247947,"about_ca_system_score_codex":0.00007126841,"about_ca_system_score_gemma":0.000116053256,"threshold_uncertainty_score":0.37683687},"labels":[],"label_agreement":null},{"id":"W1602738992","doi":"10.1111/j.1365-2958.2005.04727.x","title":"Cell cycle arrest during S or M phase generates polarized growth via distinct signals in <i>Candida albicans</i>","year":2005,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Canadian Institutes of Health Research; Genomic Health; Natural Sciences and Engineering Research Council of Canada; Burroughs Wellcome Fund","keywords":"Biology; Cell cycle; Cell biology; Mitosis; Polo-like kinase; Cell Cycle Protein; Cell growth; Candida albicans; Cell division; Cell; Cell cycle checkpoint; Genetics","score_opus":0.006483400502283982,"score_gpt":0.2571684202588496,"score_spread":0.25068501975656565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1602738992","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950081,0.0012331889,0.0021492653,0.00056414306,0.000072421324,0.00038691488,0.00005267182,0.000047712394,0.0004855908],"genre_scores_gemma":[0.99691445,0.000042428317,0.00091190205,0.0011770122,0.000106804844,0.000018604138,0.00016801452,0.000033237502,0.0006275676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982655,0.00016214506,0.00043756422,0.00053004065,0.000067019115,0.0005377178],"domain_scores_gemma":[0.9993002,0.000055071967,0.00009054469,0.0003419867,0.00006953102,0.00014267242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019463012,0.00025492057,0.0005146483,0.000114770635,0.000078163124,0.000014189904,0.00014478991,0.00019616605,0.00057266],"category_scores_gemma":[0.0000909143,0.00020454016,0.00013920768,0.00023561472,0.0001716115,0.00004809819,0.00006173105,0.0002905247,0.000092451766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013620567,0.0005741273,0.012594076,0.000082536055,0.00003350863,0.00052247004,0.00008103938,0.000009435406,0.98437685,0.0000064968804,0.00014685595,0.00021055812],"study_design_scores_gemma":[0.00668582,0.0003226918,0.004977967,0.0000497915,0.000060414703,0.00011350888,0.000030821884,0.00010143868,0.9856854,0.000030687974,0.0016608184,0.00028065027],"about_ca_topic_score_codex":0.00016528118,"about_ca_topic_score_gemma":0.0004137621,"teacher_disagreement_score":0.0076161083,"about_ca_system_score_codex":0.00012876691,"about_ca_system_score_gemma":0.000115867144,"threshold_uncertainty_score":0.8340906},"labels":[],"label_agreement":null},{"id":"W1613051972","doi":"10.1155/2012/583630","title":"Economic Evaluation of Posaconazole Versus Standard Azole Therapy as Prophylaxis against Invasive Fungal Infections in Patients with Prolonged Neutropenia in Canada","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University Health Network; Merck Canada Inc. (Canada)","funders":"","keywords":"Posaconazole; Azole; Neutropenia; Medicine; Antifungal; Intensive care medicine; Internal medicine; Itraconazole; Dermatology; Chemotherapy","score_opus":0.007512303998213336,"score_gpt":0.23680197335334457,"score_spread":0.22928966935513123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1613051972","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99732774,0.0015397674,6.8299084e-7,0.00013592305,0.00035394818,0.00040875893,0.00009090601,0.0000014192238,0.00014084554],"genre_scores_gemma":[0.99952096,0.00016220062,0.000002250863,0.00021031339,0.00006097733,0.000007787763,0.000025922809,0.000008094691,0.0000015176031],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99888855,0.00017607078,0.00037677988,0.00011976909,0.00014181103,0.00029701611],"domain_scores_gemma":[0.9986896,0.00010811804,0.0001690161,0.000090235,0.0002768471,0.00066618144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003955205,0.00011442652,0.00036908104,0.00020718206,0.000045165678,0.000005186863,0.000052244286,0.00009519379,0.00027534406],"category_scores_gemma":[0.0005529174,0.00008596178,0.000045405894,0.000111538335,0.00018216953,0.0000940313,0.00000778779,0.0002730954,0.0000010197027],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017399825,0.0001281312,0.99103314,0.000028005952,0.00007666189,0.000026965448,0.00010939293,0.000029802653,0.000110728164,0.00000940793,0.00008499536,0.006622771],"study_design_scores_gemma":[0.009876866,0.0023412725,0.98698354,0.00012743489,0.00005504713,0.00004643582,0.0001781813,0.0000032276923,0.00009201746,0.000009707621,0.00020241806,0.0000838594],"about_ca_topic_score_codex":0.3274242,"about_ca_topic_score_gemma":0.98212034,"teacher_disagreement_score":0.65469617,"about_ca_system_score_codex":0.0015590586,"about_ca_system_score_gemma":0.020421794,"threshold_uncertainty_score":0.9851315},"labels":[],"label_agreement":null},{"id":"W1630942650","doi":"10.4067/s0716-10182009000300005","title":"Tigeciclina versus vancomycin más aztreonam en el tratamiento de infecciones complicadas de piel y tejidos blandos: Experiencia en Latinoamérica","year":2009,"lang":"es","type":"article","venue":"Revista chilena de infectología","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute","funders":"","keywords":"Aztreonam; Medicine; Multicenter study; Humanities; Philosophy; Surgery; Microbiology; Randomized controlled trial","score_opus":0.01476732430413817,"score_gpt":0.343883788336856,"score_spread":0.3291164640327178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1630942650","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97637594,0.0046895747,0.002646545,0.0014603991,0.00026657808,0.0012591991,0.00012321492,0.00033980457,0.012838718],"genre_scores_gemma":[0.99149626,0.0047651324,0.00093351176,0.0011294723,0.0010947495,0.000075461896,0.00013404722,0.000082363644,0.00028900988],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.993836,0.0011843381,0.0013410215,0.001182592,0.0006472189,0.0018088309],"domain_scores_gemma":[0.9948853,0.0020713399,0.00050070265,0.0014464436,0.00022696878,0.0008692029],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016742371,0.0009334276,0.0016946148,0.00030171112,0.0004972844,0.00022822004,0.00067469716,0.0008553408,0.0005509198],"category_scores_gemma":[0.0032421008,0.0008553205,0.00066766544,0.0007035847,0.00038652561,0.00030620658,0.00015639157,0.001398314,0.000260002],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029874118,0.0016526332,0.93684506,0.00090857985,0.00030093422,0.0004570666,0.005379463,0.000032477055,0.014823802,0.01020931,0.002058176,0.024345063],"study_design_scores_gemma":[0.0056043654,0.0022775708,0.94263726,0.0012189017,0.00054119393,0.00017024878,0.0008154478,0.0007192479,0.0017061372,0.00039126573,0.042966366,0.0009520083],"about_ca_topic_score_codex":0.00029632376,"about_ca_topic_score_gemma":0.00012682314,"teacher_disagreement_score":0.040908188,"about_ca_system_score_codex":0.001385726,"about_ca_system_score_gemma":0.0009895425,"threshold_uncertainty_score":0.99938977},"labels":[],"label_agreement":null},{"id":"W1633895629","doi":"10.1128/9781555815523.ch5","title":"Essential Genes in<i>Aspergillus fumigatus</i>","year":2014,"lang":"km","type":"book-chapter","venue":"ASM Press eBooks","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Merck Canada Inc. (Canada)","funders":"","keywords":"Aspergillus fumigatus; Biology; Gene; Candida albicans; Genetics; Antifungal drug; Computational biology; Microbiology","score_opus":0.026737799267766642,"score_gpt":0.26532811635200687,"score_spread":0.23859031708424022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1633895629","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01762266,0.009121813,0.0002742176,0.0000951696,0.0018549699,0.0015529408,0.00013725185,0.00015809128,0.9691829],"genre_scores_gemma":[0.51057816,0.0014120172,0.00006717916,0.0003540862,0.0014342802,0.000036979927,0.000061863044,0.00016138115,0.48589405],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9944121,0.00016583997,0.001494024,0.0016624359,0.0011077999,0.0011577634],"domain_scores_gemma":[0.9963341,0.00029486947,0.0005195173,0.001985361,0.00032610583,0.00054006703],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00070753833,0.0011697002,0.001958023,0.00024861644,0.00021385157,0.00009759615,0.0006380376,0.0014533534,0.00085394527],"category_scores_gemma":[0.00012904548,0.0011096939,0.0007265424,0.000019759518,0.000966121,0.00007023713,0.00040849633,0.0016377275,0.0005105136],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005983961,0.00050379965,0.008678349,0.006926331,0.0021085856,0.0053752023,0.0027045237,0.000030400144,0.03559833,0.72193915,0.006286596,0.20386477],"study_design_scores_gemma":[0.0040921993,0.0005667241,0.0025931078,0.0035369587,0.0011171316,0.000076884644,0.00008063857,0.00016917921,0.014991506,0.0027608639,0.96813613,0.0018786598],"about_ca_topic_score_codex":0.0011285977,"about_ca_topic_score_gemma":0.0010045547,"teacher_disagreement_score":0.9618496,"about_ca_system_score_codex":0.00020244347,"about_ca_system_score_gemma":0.00034107768,"threshold_uncertainty_score":0.99984294},"labels":[],"label_agreement":null},{"id":"W164894659","doi":"10.1093/ofid/ofu051.99","title":"1211A Phase 3, Randomized, Double-Blind, Non-Inferiority Trial to Evaluate Efficacy and Safety of Isavuconazole versus Voriconazole in Patients with Invasive Mold Disease (SECURE): Outcomes in Invasive Aspergillosis Patients","year":2014,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; CancerCare Manitoba","funders":"","keywords":"Voriconazole; Medicine; Aspergillosis; Randomized controlled trial; Clinical trial; Internal medicine; Intensive care medicine; Antifungal; Dermatology; Immunology","score_opus":0.018113701894296435,"score_gpt":0.319837989000212,"score_spread":0.30172428710591553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W164894659","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98672974,0.000055381388,0.000021267364,0.00019824105,0.00028791119,0.011378586,0.00024276727,0.000025890768,0.0010601869],"genre_scores_gemma":[0.998469,0.00006267474,0.000023187908,0.00038443945,0.000031576088,0.0006209972,0.00032901115,0.0000429105,0.00003621548],"study_design_codex":"observational","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9965879,0.000352697,0.00100439,0.00079783925,0.0007039836,0.0005532322],"domain_scores_gemma":[0.99660724,0.001219491,0.00037304757,0.00065895333,0.00045712476,0.0006841518],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006154243,0.0004796924,0.0017708107,0.0003428874,0.00015470482,0.00008670241,0.00026908139,0.00012032699,0.00010669901],"category_scores_gemma":[0.0035935147,0.00036809908,0.00025052333,0.00051514985,0.00026136494,0.0005221943,0.00036348653,0.00023481237,0.000018445906],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.48847544,0.0045035044,0.5058702,0.00009032971,0.00014166882,0.0000048254396,0.00011406008,0.000033152235,0.0000025744214,0.00009457369,0.000030548847,0.0006391046],"study_design_scores_gemma":[0.5045456,0.002441314,0.4920363,0.00020910632,0.00034065387,6.5955156e-8,0.00004833257,0.00001991471,0.000040160212,0.00008081808,0.000010410148,0.0002273106],"about_ca_topic_score_codex":0.0010560526,"about_ca_topic_score_gemma":0.0038434542,"teacher_disagreement_score":0.016070174,"about_ca_system_score_codex":0.00029816525,"about_ca_system_score_gemma":0.0005715624,"threshold_uncertainty_score":0.9998771},"labels":[],"label_agreement":null},{"id":"W16622071","doi":"10.1099/mic.0.28626-0","title":"1 モティベーションの変動に関する探索的研究 : 日誌法を用いたパイロット調査を通じて(Hセッション【大学院生セッション】)","year":2008,"lang":"en","type":"article","venue":"経営行動科学学会年次大会 : 発表論文集","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Computer science; Business","score_opus":0.04195253099181666,"score_gpt":0.2788097103954285,"score_spread":0.23685717940361184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W16622071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92037356,0.0013392253,0.0004524453,0.002079408,0.00044035944,0.00058964797,0.00002208708,0.00041089478,0.07429239],"genre_scores_gemma":[0.96441656,0.0005050029,0.0011547909,0.0020630553,0.0005843964,0.00003305674,0.000049188173,0.00007183672,0.031122137],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968751,0.00008147379,0.0006250044,0.00078742,0.0008026735,0.00082831667],"domain_scores_gemma":[0.99774885,0.00012257417,0.00013414332,0.0011748655,0.0002743955,0.0005451406],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00035549523,0.00041790734,0.0007520216,0.00018534239,0.0004090292,0.000025453952,0.00027901176,0.0002866292,0.0022010729],"category_scores_gemma":[0.00036902618,0.00036227657,0.00042473417,0.000557329,0.0004571788,0.00023440448,0.0001052518,0.0005758554,0.0023868745],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014580956,0.0013308541,0.78940976,0.0003697854,0.0002717996,0.0021920132,0.0019142509,0.000008819911,0.03483998,0.002329441,0.15526152,0.010613711],"study_design_scores_gemma":[0.0028465672,0.00059201714,0.80429596,0.0001672013,0.00015624124,0.0006366277,0.00039703446,0.0001927669,0.008022511,0.0004924523,0.18151622,0.000684408],"about_ca_topic_score_codex":0.00010923875,"about_ca_topic_score_gemma":0.00007576188,"teacher_disagreement_score":0.044042997,"about_ca_system_score_codex":0.00018693105,"about_ca_system_score_gemma":0.00042135525,"threshold_uncertainty_score":0.99988294},"labels":[],"label_agreement":null},{"id":"W1680601107","doi":"10.71781/29302","title":"Identification des réseaux transcriptionnnels de résistance aux antifongiques chez Candida albicans","year":2009,"lang":"fr","type":"dissertation","venue":"Open MIND","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Molecular biology; Biology; Candida albicans; Microbiology","score_opus":0.042637002064187614,"score_gpt":0.36653635551314084,"score_spread":0.3238993534489532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1680601107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95132947,0.007986718,0.0036505004,0.0006622906,0.00085290335,0.0018721637,0.0003007065,0.000012022759,0.033333227],"genre_scores_gemma":[0.89346886,0.003082163,0.0036082615,0.00012548183,0.00043896015,0.00007557488,0.0017318523,0.00006812922,0.09740075],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99545145,0.00036721153,0.0012710255,0.0012878987,0.00063135853,0.0009910541],"domain_scores_gemma":[0.99720585,0.00013108771,0.0005144818,0.0009006193,0.0007520251,0.00049592135],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0017073398,0.0006594493,0.0010423965,0.00018376517,0.00073417526,0.0005838316,0.0008800525,0.000757081,0.009000807],"category_scores_gemma":[0.00051094295,0.0006945496,0.00038785566,0.00056041207,0.0005054816,0.00081339217,0.000029209075,0.00073841936,0.0008339762],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027378714,0.0015425484,0.08649162,0.0015587952,0.0004577238,0.00024782374,0.035096455,0.00003230945,0.48157445,0.0015019608,0.0014174969,0.38734093],"study_design_scores_gemma":[0.0013456665,0.00037826403,0.79585564,0.0036657553,0.0011339898,0.00001860949,0.016852152,0.00045602242,0.16595207,0.0024243612,0.0110448385,0.0008726243],"about_ca_topic_score_codex":0.005176865,"about_ca_topic_score_gemma":0.08489477,"teacher_disagreement_score":0.709364,"about_ca_system_score_codex":0.0010888781,"about_ca_system_score_gemma":0.0028923142,"threshold_uncertainty_score":0.999944},"labels":[],"label_agreement":null},{"id":"W1701541921","doi":"10.1155/2012/957973","title":"Breakthrough Filamentous Fungal Infections in Pediatric Hematopoetic Stem Cell Transplant and Oncology Patients Receiving Caspofungin","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children; Pediatric Oncology Group; University of Toronto","funders":"","keywords":"Caspofungin; Voriconazole; Medicine; Posaconazole; Echinocandin; Internal medicine; Aspergillosis; Hematopoietic stem cell transplantation; Salvage therapy; Transplantation; Surgery; Antifungal; Immunology; Chemotherapy; Dermatology; Fluconazole","score_opus":0.006575802248126498,"score_gpt":0.2354719333350555,"score_spread":0.228896131086929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1701541921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989907,0.00871226,0.000042245934,0.00024339708,0.0005153491,0.0001653596,0.00005309354,0.000006459018,0.00035480078],"genre_scores_gemma":[0.99688905,0.0023322992,0.000009824596,0.00048992294,0.00022054964,0.000003521922,0.000012970502,0.000011125063,0.000030705058],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987016,0.00014576795,0.0004516051,0.0001557149,0.000076174576,0.00046915998],"domain_scores_gemma":[0.99798334,0.00022380483,0.00013702732,0.00008027903,0.000096500204,0.0014790327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031223186,0.00014766224,0.00044961224,0.00028399992,0.00010371408,0.00001032981,0.000047054757,0.00023766849,0.00017653522],"category_scores_gemma":[0.00017112074,0.00011995161,0.00008725755,0.00015495531,0.00022746487,0.00009070957,0.0000123884165,0.0004138565,0.000003918605],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006172458,0.00035155244,0.99244356,0.00018029973,0.000027292308,0.00029597644,0.00064221,3.9742977e-7,0.00017563123,0.000023747907,0.00047933377,0.0053182533],"study_design_scores_gemma":[0.0025322873,0.0010199731,0.9886756,0.00013781352,0.00023779068,0.0042852242,0.00023090927,0.0000025193804,0.000017518008,0.000022784428,0.0027057962,0.00013180272],"about_ca_topic_score_codex":0.001232785,"about_ca_topic_score_gemma":0.0148917055,"teacher_disagreement_score":0.01365892,"about_ca_system_score_codex":0.00030603012,"about_ca_system_score_gemma":0.0011946248,"threshold_uncertainty_score":0.8309921},"labels":[],"label_agreement":null},{"id":"W1735215198","doi":"","title":"Ação da histatina 5, uma proteína antimicrobiana, no desenvolvimento de biofilmes de Candida Albicans","year":2015,"lang":"pt","type":"article","venue":"UNESP Institutional Repository (São Paulo State University)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Candida albicans; Chemistry; Microbiology; Antimicrobial; Biology","score_opus":0.023888680941590523,"score_gpt":0.24417785404735454,"score_spread":0.220289173105764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1735215198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94344026,0.0009721654,0.010255727,0.00046005312,0.0012962489,0.0012817307,0.0005901257,0.0002036333,0.041500073],"genre_scores_gemma":[0.8288729,0.00018644532,0.0015321106,0.00035733712,0.00028279045,0.000004588242,0.0001906201,0.000044132285,0.16852905],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99581605,0.00050746533,0.00064369733,0.0010019849,0.0008587215,0.0011720574],"domain_scores_gemma":[0.9963156,0.00014027202,0.00038499243,0.0007482499,0.0011013355,0.0013095762],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006890083,0.0006145661,0.00069226784,0.00054881925,0.0011189088,0.00013905668,0.00053230976,0.00037316096,0.00023875674],"category_scores_gemma":[0.00041255608,0.0006608612,0.00033572526,0.0008310128,0.0011218039,0.0006497082,0.00022478803,0.0007497836,0.000296454],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.018222379,0.004516612,0.6360994,0.00271045,0.0024175926,0.059585433,0.021073274,0.0040296577,0.11788403,0.008612576,0.12319695,0.0016516544],"study_design_scores_gemma":[0.02011226,0.004035058,0.09821658,0.0038793038,0.0027152596,0.002064573,0.037494857,0.01069783,0.035249516,0.00042811997,0.78082234,0.00428428],"about_ca_topic_score_codex":0.0042009363,"about_ca_topic_score_gemma":0.0027779299,"teacher_disagreement_score":0.65762544,"about_ca_system_score_codex":0.0058476985,"about_ca_system_score_gemma":0.010055843,"threshold_uncertainty_score":0.99958426},"labels":[],"label_agreement":null},{"id":"W1753843915","doi":"10.1046/j.1439-0507.2002.00741.x","title":"Epidemiology, treatment and outcome of candidemia: a five‐year review at three Canadian hospitals","year":2002,"lang":"en","type":"review","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":122,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Royal Alexandra Hospital; University of Alberta Hospital; Foothills Medical Centre","funders":"","keywords":"Medicine; Epidemiology; Fluconazole; Mortality rate; Antifungal; Fungemia; Candida albicans; Mycosis; Internal medicine; Pediatrics; Surgery; Biology; Microbiology; Dermatology","score_opus":0.15095393624588183,"score_gpt":0.4070600997357375,"score_spread":0.25610616348985565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1753843915","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005878554,0.99468994,5.175953e-7,0.0004160615,0.00007761566,0.0017309292,0.00045171572,0.000018815044,0.0020265493],"genre_scores_gemma":[0.00026732028,0.9927833,0.000118623175,0.0005116492,0.00007828289,0.000096984484,0.00016291335,0.000036047917,0.005944841],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974923,0.00021249907,0.0011732461,0.000557297,0.00010250806,0.00046216295],"domain_scores_gemma":[0.9975465,0.0007353557,0.00043007307,0.00075222226,0.00007434973,0.0004615316],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006326764,0.00046404422,0.0047833044,0.0001323705,0.00008159285,0.0000022179859,0.00012165037,0.00040721815,0.0007334927],"category_scores_gemma":[0.0017397095,0.00029382913,0.00072716747,0.00017633873,0.00021631946,0.000025765929,0.00004925394,0.0002592114,0.00013816782],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010934037,0.000053585132,0.42863718,0.096226305,0.00042201517,0.000074967706,0.000019970174,1.0076643e-8,5.150307e-8,0.00010202514,0.0151931625,0.45925978],"study_design_scores_gemma":[0.0002280742,0.00030567223,0.018882861,0.03956846,0.0025491684,0.000059916034,0.000005256874,2.8092336e-7,1.3692258e-7,0.000023670356,0.9381495,0.00022699633],"about_ca_topic_score_codex":0.043888774,"about_ca_topic_score_gemma":0.1435653,"teacher_disagreement_score":0.92295635,"about_ca_system_score_codex":0.0009443461,"about_ca_system_score_gemma":0.00040990187,"threshold_uncertainty_score":0.99995136},"labels":[],"label_agreement":null},{"id":"W1772600489","doi":"10.14740/jmc.v6i11.2337","title":"Esophageal Candidiasis in a Patient With Uncontrolled Diabetes Mellitus and Recurrent Abdominal Pain, Symptomatic Or Incidental? A Case Report and Brief Literature Review","year":2015,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Esophagogastroduodenoscopy; Diabetes mellitus; Asymptomatic; Esophageal candidiasis; Abdominal pain; Epigastric pain; Fluconazole; Past medical history; Medical history; Candida glabrata; Internal medicine; Surgery; Human immunodeficiency virus (HIV); Dermatology; Endoscopy; Antifungal; Immunology","score_opus":0.01665978892220611,"score_gpt":0.29900308583877755,"score_spread":0.28234329691657145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1772600489","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77460676,0.22282827,0.00001422947,0.0021669206,0.00005754438,0.00030709713,0.000004706187,0.0000043231094,0.000010118931],"genre_scores_gemma":[0.97741216,0.02044004,0.00029997734,0.001676692,0.00012672719,0.000010997787,0.0000054436123,0.000010031532,0.000017920653],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99710685,0.00035605975,0.0009520368,0.00020774109,0.0011545412,0.00022278402],"domain_scores_gemma":[0.9974485,0.00073042896,0.00042762316,0.00016516185,0.00035360781,0.0008746562],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0037842558,0.00018284262,0.0009244925,0.00011818019,0.000038883754,0.000041274714,0.000051983832,0.000110992056,0.00005241356],"category_scores_gemma":[0.013025396,0.00009565734,0.00008323481,0.00024896814,0.00017697748,0.00015879427,0.000037212405,0.0004830635,2.3293784e-7],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029706485,0.00027332932,0.06341017,0.0024496096,0.00008474098,0.868006,0.00069396896,8.071634e-8,0.0000024934275,0.0000017001257,0.0030167315,0.05909052],"study_design_scores_gemma":[0.007899145,0.006809811,0.008857239,0.040076036,0.0005403386,0.9325779,0.0020928653,0.00018889798,0.00002408148,0.000025317802,0.0007345268,0.00017383821],"about_ca_topic_score_codex":0.00007059143,"about_ca_topic_score_gemma":0.00076582545,"teacher_disagreement_score":0.20280538,"about_ca_system_score_codex":0.00012977117,"about_ca_system_score_gemma":0.0007381715,"threshold_uncertainty_score":0.9952883},"labels":[],"label_agreement":null},{"id":"W1796285230","doi":"10.1128/9781555815776.ch10","title":"Signal Transduction in the Interactions of Fungal Pathogens and Mammalian Hosts","year":2014,"lang":"en","type":"book-chapter","venue":"ASM Press eBooks","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Biology; Cryptococcus neoformans; Signal transduction; Aspergillus fumigatus; Candida albicans; Microbiology; Virulence; Cell biology; Genetics; Gene","score_opus":0.03504126170594427,"score_gpt":0.2728081307440222,"score_spread":0.23776686903807795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1796285230","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.038219113,0.00056208385,0.00026559224,0.0001850167,0.00016467183,0.00077803875,0.0000806286,0.00002434059,0.9597205],"genre_scores_gemma":[0.76635593,0.00005289247,0.00004228582,0.000076019416,0.00014923538,0.000013232706,0.000017105915,0.000021405263,0.23327188],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99892145,0.000052623804,0.00034520446,0.0002842951,0.00025315752,0.00014327287],"domain_scores_gemma":[0.99926996,0.000111735375,0.00012869218,0.0003581574,0.00007609996,0.00005533557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027593962,0.00019599705,0.0003749833,0.00007969875,0.000044496832,0.000012326479,0.000086567925,0.00018839745,0.0001345441],"category_scores_gemma":[0.000016057495,0.00014254221,0.00014394023,0.0000053857957,0.00020254683,0.000022955146,0.000018705938,0.0004894757,0.0000036037497],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006185575,0.0005048569,0.010221485,0.0060280445,0.0011193727,0.0008788396,0.02234602,0.0000063215766,0.08938721,0.41433844,0.008824717,0.4401591],"study_design_scores_gemma":[0.0033371302,0.0015744532,0.05324319,0.0032375702,0.0017286239,0.0005189528,0.00061417837,0.00008468238,0.014137855,0.008144408,0.9123005,0.0010784238],"about_ca_topic_score_codex":0.00009297862,"about_ca_topic_score_gemma":0.0003492932,"teacher_disagreement_score":0.9034758,"about_ca_system_score_codex":0.000025395684,"about_ca_system_score_gemma":0.00004233629,"threshold_uncertainty_score":0.5812702},"labels":[],"label_agreement":null},{"id":"W1854884714","doi":"10.1016/j.jaci.2015.09.016","title":"Impaired RASGRF1/ERK–mediated GM-CSF response characterizes CARD9 deficiency in French-Canadians","year":2015,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":84,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; McGill University; McGill Genome Centre; Hôpital Maisonneuve-Rosemont; Centre Hospitalier Universitaire de Sherbrooke; McGill University Health Centre","funders":"","keywords":"MAPK/ERK pathway; Medicine; Psychology; Biology; Genetics; Kinase","score_opus":0.0417053226821339,"score_gpt":0.3301230133756235,"score_spread":0.2884176906934896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1854884714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99090844,0.0037772765,0.000020472631,0.0042226794,0.00056483014,0.00009370635,0.000005561784,0.00000990529,0.0003971346],"genre_scores_gemma":[0.99616456,0.002293977,0.00009623628,0.00068531354,0.00013786495,0.000001366225,0.0000050463696,0.000011154986,0.000604463],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99742746,0.0005714234,0.0012242452,0.00022312312,0.00021122873,0.00034254548],"domain_scores_gemma":[0.9978468,0.0007928137,0.0003773468,0.00025662145,0.00035878143,0.0003676283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026341036,0.00015234004,0.0007769805,0.00019552265,0.000044126085,0.000013488349,0.00016156067,0.00036922377,0.0001033314],"category_scores_gemma":[0.0049654944,0.00011652097,0.00021221397,0.00019428026,0.0004673677,0.00013769628,0.00004697116,0.0008183341,0.000023524715],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.04934833,0.0020373052,0.89884734,0.00002884438,0.0012912399,0.003053065,0.0019089263,0.0000030854287,0.025096145,0.0001359985,0.0038239907,0.014425746],"study_design_scores_gemma":[0.004396814,0.0035577437,0.982212,0.00008717187,0.000050113515,0.0002611033,0.0008260394,0.000016076949,0.000043988464,0.00017466943,0.008263843,0.0001104122],"about_ca_topic_score_codex":0.00029258832,"about_ca_topic_score_gemma":0.0031060276,"teacher_disagreement_score":0.083364695,"about_ca_system_score_codex":0.00011591096,"about_ca_system_score_gemma":0.0010572756,"threshold_uncertainty_score":0.5944519},"labels":[],"label_agreement":null},{"id":"W1865835289","doi":"10.1155/2012/272197","title":"Successful Use of Posaconazole to Treat Invasive Cutaneous Fungal Infection in a Liver Transplant Patient on Sirolimus","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Health Sciences; McMaster University","funders":"","keywords":"Posaconazole; Sirolimus; Medicine; Dermatology; Antifungal; Internal medicine; Itraconazole","score_opus":0.010077102263249465,"score_gpt":0.22992257718444925,"score_spread":0.2198454749211998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1865835289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99792874,0.0011262362,0.00002042884,0.00024713596,0.00026246672,0.00019328964,0.00013104103,0.0000038871594,0.00008678681],"genre_scores_gemma":[0.9978852,0.0006480668,0.000006180513,0.0013135031,0.000110575806,0.0000026766843,0.000012242662,0.000008879407,0.0000126673485],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99892724,0.000109887216,0.00039477105,0.00012914321,0.000090408954,0.00034854066],"domain_scores_gemma":[0.9979657,0.00023888226,0.00011146951,0.000091623006,0.00012773088,0.0014646198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010913398,0.0001331735,0.0004028664,0.0003320199,0.000047002995,0.0000072427247,0.000038613995,0.00016314059,0.00024911173],"category_scores_gemma":[0.00070905127,0.000101045494,0.00011939511,0.00013205434,0.00018943934,0.00007571751,0.0000076134065,0.00025736788,0.0000049528394],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062129716,0.00029359615,0.98698866,0.00012330494,0.000046453395,0.0010144663,0.0005329836,0.000008582028,0.0030701996,0.00003573881,0.00032868015,0.0069360537],"study_design_scores_gemma":[0.0014680822,0.0032314793,0.98487014,0.00060477614,0.00018265858,0.0057806754,0.00009459893,0.0000038745907,0.0012296496,0.0000148486315,0.002372878,0.00014634954],"about_ca_topic_score_codex":0.009920597,"about_ca_topic_score_gemma":0.047878694,"teacher_disagreement_score":0.037958097,"about_ca_system_score_codex":0.00020917424,"about_ca_system_score_gemma":0.000899777,"threshold_uncertainty_score":0.99667245},"labels":[],"label_agreement":null},{"id":"W1878883003","doi":"10.1046/j.1365-2141.2003.03883.x","title":"Disseminated fusariosis in a patient with acute leukaemia","year":2002,"lang":"en","type":"article","venue":"British Journal of Haematology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver Hospital and Health Sciences Centre","funders":"","keywords":"Medicine; Skin biopsy; White blood cell; Bone marrow; Vincristine; Cytarabine; Leukemia; Absolute neutrophil count; Pathology; Induction chemotherapy; Amphotericin B; Rash; Biopsy; Chemotherapy; Surgery; Gastroenterology; Internal medicine; Dermatology; Cyclophosphamide; Neutropenia","score_opus":0.009444974156630393,"score_gpt":0.23954477623084594,"score_spread":0.23009980207421554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1878883003","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99449456,0.002939726,0.00007758315,0.00064348476,0.00006329746,0.00011751735,0.0000040460113,0.000008298445,0.0016515183],"genre_scores_gemma":[0.9978935,0.0009008202,0.00069557154,0.00024425177,0.000018085188,0.0000025757784,0.0000019585184,0.0000119777815,0.00023126006],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9988167,0.00006376199,0.00051150535,0.00014250283,0.00022420027,0.00024131479],"domain_scores_gemma":[0.99928516,0.00006295036,0.00021246784,0.00011811463,0.00019526856,0.00012603206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014037057,0.00009601849,0.0006000256,0.000113078146,0.000036726527,0.0000145368585,0.000078738696,0.000101972386,0.0004178094],"category_scores_gemma":[0.00017192993,0.000083938234,0.000095005285,0.0002066106,0.00012363936,0.000102038975,0.000016225351,0.00040091257,0.00001225915],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010429127,0.00089471927,0.15025374,0.00013369783,0.00024681468,0.7955855,0.000662023,0.0000030397032,0.0016664211,0.000074347714,0.0119617535,0.03747503],"study_design_scores_gemma":[0.0027370236,0.0014178157,0.10719131,0.0014692288,0.00018651021,0.8831474,0.0005664188,0.000079222074,0.002045668,0.000107482454,0.0008857576,0.00016614539],"about_ca_topic_score_codex":0.000047748763,"about_ca_topic_score_gemma":0.0003746484,"teacher_disagreement_score":0.08756192,"about_ca_system_score_codex":0.00007053053,"about_ca_system_score_gemma":0.000058622358,"threshold_uncertainty_score":0.457472},"labels":[],"label_agreement":null},{"id":"W1879607799","doi":"10.1002/yea.2925","title":"The effect of histatin 5, adsorbed on PMMA and hydroxyapatite, on <i>Candida albicans</i> colonization","year":2012,"lang":"en","type":"article","venue":"Yeast","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Candida albicans; Corpus albicans; Albumin; In vivo; Microbiology; In vitro; Biology; Biochemistry","score_opus":0.006056523822417172,"score_gpt":0.25667041661237566,"score_spread":0.2506138927899585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1879607799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902341,0.00020822644,0.000032295502,0.0002249941,0.00008738056,0.0002804428,0.000011463382,0.000014612916,0.00890649],"genre_scores_gemma":[0.99824893,0.00003290595,0.00001764524,0.00016142627,0.0000689022,0.000010417416,0.000011681581,0.000009764417,0.0014383445],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99936056,0.0000758701,0.00012630699,0.00010376222,0.00018501005,0.00014847927],"domain_scores_gemma":[0.99939317,0.00025011596,0.00005809378,0.00019406596,0.000028054503,0.00007651775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002999391,0.000081384205,0.00015590567,0.000020970816,0.000072014554,0.000005892006,0.00003209283,0.000039139137,0.00003953419],"category_scores_gemma":[0.00028230943,0.000047925252,0.000033308657,0.00008337085,0.00009908589,0.000029738188,0.000009222668,0.00008725594,0.000023138411],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002398612,0.00012622423,0.9677271,0.000142706,0.000033244356,0.0000023724895,0.00036027186,0.0000028205563,0.01079368,0.00086888974,0.0041573015,0.013386739],"study_design_scores_gemma":[0.0013755731,0.0020077631,0.9583518,0.00015053988,0.000061976345,0.0000032267824,0.000062334606,0.00009640764,0.023902457,0.000017996916,0.013884988,0.00008493292],"about_ca_topic_score_codex":0.000025354837,"about_ca_topic_score_gemma":0.00003482071,"teacher_disagreement_score":0.0133018065,"about_ca_system_score_codex":0.000038166385,"about_ca_system_score_gemma":0.000017446411,"threshold_uncertainty_score":0.1954335},"labels":[],"label_agreement":null},{"id":"W1885868886","doi":"10.1111/j.1601-0825.2005.01074.x","title":"Improved oral hygiene and <i>Candida</i> species colonization level in geriatric patients","year":2005,"lang":"en","type":"article","venue":"Oral Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Colonization; Medicine; Oral hygiene; Hygiene; Population; Minimum Data Set; Internal medicine; Nursing homes; Dentistry; Biology; Nursing; Environmental health; Pathology; Microbiology","score_opus":0.018067630186631503,"score_gpt":0.26268435003646456,"score_spread":0.24461671984983308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1885868886","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99815375,0.00061926665,0.0000539084,0.00037366353,0.000045397355,0.00028484987,0.000104234256,0.000029095661,0.00033583352],"genre_scores_gemma":[0.99767405,0.00015761862,0.00028750626,0.0003477222,0.00007337589,0.000009335037,0.00011415094,0.000010515613,0.0013257038],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999241,0.000026190846,0.00018075529,0.0002179958,0.00014796104,0.00018611047],"domain_scores_gemma":[0.99959016,0.000021547477,0.000041540334,0.00013442081,0.00008254192,0.00012980738],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000046930723,0.00010581346,0.00020260588,0.000067136156,0.00004915524,0.000022058137,0.00003597505,0.000043211367,0.0001510205],"category_scores_gemma":[0.00019989077,0.00008862043,0.00004031831,0.00020255864,0.00007107646,0.00016190652,0.000029177054,0.00005533349,0.000013942993],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044382864,0.00038403654,0.9832981,0.000051861593,0.0000064242613,0.0000045799875,0.00003666096,0.0000017393,0.0008595775,0.000036081194,0.0018399211,0.013037161],"study_design_scores_gemma":[0.0017161599,0.00015707279,0.99537516,0.000024331035,0.00004663641,3.9557685e-7,0.000036482514,0.00022384131,0.00024986916,0.000035504174,0.0020388954,0.00009565947],"about_ca_topic_score_codex":0.00008425563,"about_ca_topic_score_gemma":0.00063113077,"teacher_disagreement_score":0.012941501,"about_ca_system_score_codex":0.00008669853,"about_ca_system_score_gemma":0.000072564275,"threshold_uncertainty_score":0.36138362},"labels":[],"label_agreement":null},{"id":"W1906380930","doi":"10.3389/fmicb.2015.00885","title":"Histatin 5 inhibits adhesion of C. albicans to Reconstructed Human Oral Epithelium","year":2015,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fundação de Amparo à Pesquisa do Estado de São Paulo; Canada Foundation for Innovation","keywords":"Candida albicans; Corpus albicans; Microbiology; Hypha; Oral mucosa; Biology; Saliva; Epithelium; Colony-forming unit; Bacteria; Biochemistry","score_opus":0.02944603939735947,"score_gpt":0.29580901019179434,"score_spread":0.2663629707944349,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1906380930","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99657863,0.00029982816,0.0009381517,0.0003578405,0.00047688052,0.00032497916,0.000050035098,0.000021281165,0.00095235545],"genre_scores_gemma":[0.97116524,0.0000095230735,0.027170725,0.0003619656,0.000030524367,0.0000061766145,0.00009384208,0.000013068302,0.001148955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879587,0.00013477284,0.0004249133,0.00031079128,0.000053544612,0.00028013086],"domain_scores_gemma":[0.9993197,0.000020459252,0.000093009934,0.00027549334,0.00014961514,0.00014177848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039246742,0.00013004383,0.00052522024,0.00020964444,0.000022609778,0.0000022794704,0.000108438566,0.00016836106,0.000064187676],"category_scores_gemma":[0.00026080818,0.00011471178,0.000063047555,0.00024116051,0.00025916912,0.000030330073,0.00004672878,0.00017912914,0.000021084437],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005022439,0.00007819201,0.38945863,0.00003319434,0.00001701571,0.000010887698,0.00045279675,8.851806e-7,0.5552269,0.00003756878,0.052229155,0.001952495],"study_design_scores_gemma":[0.009880497,0.0040355106,0.2916198,0.0006064729,0.0001375267,0.00014260103,0.0066333804,0.00003597456,0.6224345,0.0023596815,0.06130156,0.0008124785],"about_ca_topic_score_codex":0.00014779896,"about_ca_topic_score_gemma":0.0003598701,"teacher_disagreement_score":0.09783882,"about_ca_system_score_codex":0.00019404395,"about_ca_system_score_gemma":0.00017000362,"threshold_uncertainty_score":0.46778107},"labels":[],"label_agreement":null},{"id":"W1906569741","doi":"10.1111/j.1399-3046.2010.01415.x","title":"Invasive fungal infections in pediatric heart transplant recipients: Incidence, risk factors, and outcomes","year":2010,"lang":"en","type":"article","venue":"Pediatric Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"University of Alabama at Birmingham","keywords":"Medicine; Incidence (geometry); Heart transplantation; Risk factor; Internal medicine; Transplantation; Aspergillosis; Pediatrics; Intensive care medicine; Immunology","score_opus":0.009815613766627127,"score_gpt":0.26341491671391226,"score_spread":0.2535993029472851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1906569741","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981104,0.00016125571,0.00025062286,0.000103156686,0.0004229156,0.00047733574,0.00017600175,0.000081093,0.00021719838],"genre_scores_gemma":[0.98108894,0.018100502,0.00030902578,0.00005492466,0.00024158285,0.000026868092,0.00012429077,0.000019211113,0.000034677643],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99837196,0.00008548763,0.00046456247,0.00042484712,0.00033797897,0.00031518645],"domain_scores_gemma":[0.99876523,0.00064778014,0.00011036589,0.00020873736,0.000071642586,0.0001962727],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036720574,0.00023786329,0.00036380586,0.00047109716,0.00015505835,0.000026680711,0.000064481974,0.00021393163,0.00006337721],"category_scores_gemma":[0.00025989534,0.00019525633,0.000117979194,0.00059655757,0.000056596957,0.00031116098,0.000006439566,0.0007037712,0.000020176154],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016797912,0.00022024658,0.9975122,0.00024859517,0.00000976453,0.000034633158,0.0013528984,0.0000047388594,0.0003216424,0.000027015167,0.000035379187,0.00006488702],"study_design_scores_gemma":[0.0015158432,0.0001707374,0.9971108,0.0000151088925,0.0005825522,0.000048191676,0.000048144135,0.000014217693,0.0001965334,0.00009200731,0.000011196141,0.00019469653],"about_ca_topic_score_codex":0.0007122222,"about_ca_topic_score_gemma":0.0066086175,"teacher_disagreement_score":0.017939247,"about_ca_system_score_codex":0.000037308226,"about_ca_system_score_gemma":0.00018225073,"threshold_uncertainty_score":0.7962322},"labels":[],"label_agreement":null},{"id":"W1908365728","doi":"10.1111/1469-0691.12409","title":"Improvement in the outcome of invasive fusariosis in the last decade","year":2013,"lang":"en","type":"article","venue":"Clinical Microbiology and Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":192,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Astellas Pharma; Pfizer","keywords":"Fusariosis; Medicine; Amphotericin B; Voriconazole; Internal medicine; Hazard ratio; Neutropenia; Gastroenterology; Amphotericin B deoxycholate; Surgery; Caspofungin; Chemotherapy; Confidence interval; Biology; Antifungal; Dermatology","score_opus":0.04457420720864806,"score_gpt":0.35523630828322106,"score_spread":0.310662101074573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1908365728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975444,0.00007581916,0.000014419162,0.0014699575,0.0000945052,0.00042908403,0.0000017309126,0.000003057308,0.0003670029],"genre_scores_gemma":[0.9965067,0.00027348628,0.000012634522,0.0031162533,0.000038156646,0.00002298563,0.000008199464,0.0000018323112,0.000019731186],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990148,0.0002521429,0.00045647926,0.00014860326,0.000020206693,0.00010775521],"domain_scores_gemma":[0.99888617,0.00082674256,0.00007996259,0.00015689559,0.000035558696,0.000014666806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011605261,0.00006099533,0.00021137566,0.00003391083,0.000029958324,0.0000044825756,0.00005190345,0.00016195544,0.00004279725],"category_scores_gemma":[0.0007509342,0.000029840061,0.00006893542,0.00010614646,0.00025689058,0.000036948106,0.000021789441,0.00034720622,0.000017523558],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046369565,0.00023287068,0.9709558,0.000029882296,0.000008860408,8.002086e-7,0.00017397535,1.3039426e-7,0.025043968,0.000080733844,0.00030039746,0.0031262047],"study_design_scores_gemma":[0.0006265487,0.0006241832,0.99685115,0.000023905954,0.000016999458,0.000008911745,0.0002958639,0.0000019563129,0.00067549443,0.00025000446,0.0005942461,0.000030725467],"about_ca_topic_score_codex":0.00034658195,"about_ca_topic_score_gemma":0.0023973011,"teacher_disagreement_score":0.025895353,"about_ca_system_score_codex":0.000013388241,"about_ca_system_score_gemma":0.000021116166,"threshold_uncertainty_score":0.15084575},"labels":[],"label_agreement":null},{"id":"W1913932992","doi":"10.1111/j.1365-2958.2010.07503.x","title":"Cell wall integrity is linked to mitochondria and phospholipid homeostasis in <i>Candida albicans</i> through the activity of the post‐transcriptional regulator Ccr4‐Pop2","year":2010,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":129,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"","keywords":"Biology; Regulator; Candida albicans; Mitochondrion; Homeostasis; Cell biology; Phospholipid; Cell wall; Cell; Biochemistry; Microbiology; Gene; Membrane","score_opus":0.007369707973075206,"score_gpt":0.2439150253148702,"score_spread":0.236545317341795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1913932992","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870736,0.0005674263,0.00017977472,0.010758544,0.00028926914,0.0006766925,0.00014417614,0.0000111342515,0.00029937783],"genre_scores_gemma":[0.9923692,0.000040012,0.00081529416,0.0064732037,0.000032613534,0.000017192857,0.00001819922,0.00001696813,0.0002173167],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866194,0.00016929214,0.00029351053,0.00045040465,0.00010755746,0.00031730876],"domain_scores_gemma":[0.99890167,0.00008778717,0.00009322679,0.00069121574,0.00015047424,0.00007564348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002545264,0.00020605032,0.0003986679,0.00004143758,0.00008634929,0.00001036024,0.0002623384,0.00029459273,0.0001628966],"category_scores_gemma":[0.00013582651,0.00012367917,0.00019399065,0.00024965327,0.00053808436,0.000039129187,0.00010450823,0.0008361083,0.000008486383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005234856,0.00018101034,0.01881104,0.000049536004,0.000033164088,0.0000056889894,0.0008703052,3.526563e-7,0.97807693,0.00028486564,0.0008548895,0.00030870282],"study_design_scores_gemma":[0.0011658445,0.00020350354,0.27738667,0.00004639136,0.000070393915,0.000045213994,0.0001254664,0.0000032963985,0.697853,0.00034646058,0.022590805,0.0001629298],"about_ca_topic_score_codex":0.0010862928,"about_ca_topic_score_gemma":0.0014277472,"teacher_disagreement_score":0.28022394,"about_ca_system_score_codex":0.00004718236,"about_ca_system_score_gemma":0.00017803664,"threshold_uncertainty_score":0.504349},"labels":[],"label_agreement":null},{"id":"W1916130854","doi":"10.18433/j3kk50","title":"Pharmacokinetics of Tinidazole in Chinese subjects: Comparison of Mongolian, Korean, Hui, Uighur and Han nationalities","year":2009,"lang":"en","type":"article","venue":"Journal of Pharmacy & Pharmaceutical Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Yanbian University","keywords":"Tinidazole; Traditional medicine; Han chinese; Medicine; Pharmacokinetics; Internal medicine; Biology; Genetics","score_opus":0.0748185717702436,"score_gpt":0.4518137463087164,"score_spread":0.3769951745384728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1916130854","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99014014,0.0052955607,0.000042964522,0.0025482324,0.00014909802,0.00018252032,0.000008577075,0.0000071816344,0.001625711],"genre_scores_gemma":[0.99725807,0.001438154,0.0006397995,0.00043754917,0.00016090764,8.151129e-7,0.0000012272574,0.000005839369,0.000057632147],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99715555,0.00013262006,0.0011674254,0.00021203952,0.0010182587,0.000314094],"domain_scores_gemma":[0.998467,0.00033654587,0.00049405923,0.00009013038,0.00032637612,0.0002858606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015429109,0.00018458565,0.0006713144,0.00031456142,0.00007070519,0.000021823329,0.00026992508,0.00004307913,0.00017935075],"category_scores_gemma":[0.00037775887,0.0001308036,0.00015681071,0.00074399967,0.0008107995,0.00034252164,0.000039398485,0.00043178577,0.0000011547661],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011744887,0.00095921854,0.7481067,0.00018336702,0.000040631763,0.000027834138,0.0010704701,0.00009285511,0.22885583,0.00024736757,0.00033447734,0.01890672],"study_design_scores_gemma":[0.0071748304,0.0010703475,0.52863896,0.00034873522,0.0002454559,0.00010565924,0.0013438549,0.014496812,0.44090912,0.0010543399,0.0043617953,0.00025007818],"about_ca_topic_score_codex":0.000033513854,"about_ca_topic_score_gemma":0.000011150765,"teacher_disagreement_score":0.21946777,"about_ca_system_score_codex":0.00004947045,"about_ca_system_score_gemma":0.0002644941,"threshold_uncertainty_score":0.5334016},"labels":[],"label_agreement":null},{"id":"W1921223503","doi":"10.1111/j.1574-6941.2005.00045.x","title":"Metal resistance in Candida biofilms","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biofilm; Biology; Metal toxicity; Candida tropicalis; Metal; Microbiology; Metal ions in aqueous solution; Extracellular polymeric substance; Toxicity; Chelation; Candida albicans; Environmental chemistry; Bacteria; Chemistry; Inorganic chemistry","score_opus":0.007338543560731059,"score_gpt":0.24000155489646385,"score_spread":0.2326630113357328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1921223503","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98453605,0.0011856144,0.000011511984,0.0011519383,0.00032518926,0.00030379783,0.000035230525,0.000048544534,0.01240211],"genre_scores_gemma":[0.9870143,0.000030375242,0.00065135065,0.0007293268,0.000106834814,0.00002333987,0.00018157247,0.000014549867,0.011248328],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984586,0.000116972325,0.0004053843,0.00045826443,0.00003186521,0.00052887254],"domain_scores_gemma":[0.9993832,0.000115240655,0.00008616669,0.00030653802,0.00005803802,0.000050823935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028650003,0.00017159275,0.0005239301,0.00015421826,0.00006214917,0.0000038893236,0.00010858937,0.00035710385,0.0005342286],"category_scores_gemma":[0.00008908906,0.0001495149,0.00010548343,0.00022116787,0.00038659346,0.00003280599,0.00004129837,0.0002951366,0.0002214995],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031805984,0.00017814286,0.5946931,0.000022016759,0.000021271957,0.00016928004,0.000029519655,7.1704136e-7,0.39460114,0.0011498687,0.008775538,0.00004133788],"study_design_scores_gemma":[0.0016262021,0.00019359101,0.95017046,0.00001842075,0.000031190022,0.00009576024,0.000052302876,0.0000017190905,0.010982077,0.0006948222,0.03596419,0.00016928573],"about_ca_topic_score_codex":0.0003466034,"about_ca_topic_score_gemma":0.048486512,"teacher_disagreement_score":0.38361907,"about_ca_system_score_codex":0.00017736728,"about_ca_system_score_gemma":0.00016622704,"threshold_uncertainty_score":0.9688761},"labels":[],"label_agreement":null},{"id":"W1921725164","doi":"10.1128/jcm.00906-15","title":"Analytical Comparison of <i>In Vitro</i> -Spiked Human Serum and Plasma for PCR-Based Detection of Aspergillus fumigatus DNA: a Study by the European Aspergillus PCR Initiative","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Instituto de Salud Carlos III; Pan American Health Organization; Grupo Ferrer Internacional, S.A; Debreceni Egyetem; Pfizer; Hospital for Sick Children; Astellas Pharma; Università degli Studi di Milano; Centre Hospitalier Universitaire Vaudois; Gilead Sciences; Emory University; European Commission; Fundación Mutua Madrileña","keywords":"Galactomannan; Aspergillus fumigatus; Whole blood; Aspergillus; Immunoassay; Chromatography; Blood plasma; Polymerase chain reaction; Centrifugation; Biology; Aspergillosis; Chemistry; Microbiology; Immunology; Biochemistry; Antibody","score_opus":0.1271621171085575,"score_gpt":0.41176141910966113,"score_spread":0.2845993020011036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1921725164","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979343,0.0002855854,0.00028074413,0.0005521099,0.0002146871,0.00045657787,0.00005523801,0.000004446024,0.00021630788],"genre_scores_gemma":[0.9994034,0.000012069098,0.00017784433,0.00021355992,0.00013982781,0.0000017778178,0.000009264772,0.000015207477,0.000027032542],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99590003,0.001291949,0.0021959434,0.00025496815,0.000129317,0.00022779123],"domain_scores_gemma":[0.9964418,0.0014533552,0.0011118866,0.00023475273,0.00058630557,0.00017194742],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004650353,0.0001670455,0.0013879251,0.00010634087,0.0000498382,0.000005757614,0.00017133694,0.00018455439,0.0000068987056],"category_scores_gemma":[0.0024229696,0.000104450046,0.0003193044,0.00015725126,0.0006575008,0.000044837536,0.000053679487,0.0006560444,0.0000012173824],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016341886,0.003615948,0.44172436,0.00008633192,0.00041231868,0.000031029216,0.0006456865,0.000015259415,0.5298711,0.000014192239,0.0008763955,0.006365468],"study_design_scores_gemma":[0.043859974,0.042548414,0.73167145,0.0002970081,0.001218849,0.00013026227,0.007976418,0.0009858664,0.16727057,0.00015158732,0.003526618,0.00036296234],"about_ca_topic_score_codex":0.000015792144,"about_ca_topic_score_gemma":0.00018138932,"teacher_disagreement_score":0.36260054,"about_ca_system_score_codex":0.000057545156,"about_ca_system_score_gemma":0.00019589107,"threshold_uncertainty_score":0.42593494},"labels":[],"label_agreement":null},{"id":"W1923814307","doi":"10.4049/jimmunol.177.1.479","title":"Altered CD4+ T Cell Phenotype and Function Determine the Susceptibility to Mucosal Candidiasis in Transgenic Mice Expressing HIV-1","year":2006,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; McGill University; Montreal Clinical Research Institute; Université de Montréal","funders":"","keywords":"Candida albicans; Corpus albicans; Biology; Immunology; T cell; In vitro; Phenotype; Cytotoxic T cell; Molecular biology; Immune system; Microbiology","score_opus":0.01305124333023962,"score_gpt":0.24485128777773454,"score_spread":0.2318000444474949,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1923814307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926676,0.0037425759,0.00092255144,0.0019784113,0.00023017424,0.00020817474,0.0000028664904,0.0000062122654,0.00024142892],"genre_scores_gemma":[0.9989778,0.00019223469,0.00015880313,0.0002516276,0.00021551063,0.0000016192439,0.0000016763579,0.0000107280175,0.00019000698],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998672,0.00031078633,0.0004959239,0.0001293649,0.00014926745,0.00024265316],"domain_scores_gemma":[0.99908286,0.00029382858,0.00018064125,0.00028293696,0.00011694842,0.00004280916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009979446,0.0001251891,0.00032040058,0.00008831132,0.000111192814,0.000014677849,0.00015381796,0.000082533596,0.0000630151],"category_scores_gemma":[0.00009666763,0.00006836588,0.0000856261,0.0001623866,0.00020591564,0.0000962673,0.000030750623,0.00042820608,0.0000073308947],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0063966485,0.00018899837,0.06639267,0.00004363266,0.000047470185,0.000009931975,0.0013369143,0.000042441177,0.91826576,0.000010833234,0.00048457514,0.006780116],"study_design_scores_gemma":[0.0019480524,0.00081032637,0.9714477,0.00007073386,0.00019257424,0.00012726187,0.0015394626,0.000042872998,0.022796778,0.000302141,0.00063280895,0.0000892678],"about_ca_topic_score_codex":0.00039212636,"about_ca_topic_score_gemma":0.0014771449,"teacher_disagreement_score":0.90505505,"about_ca_system_score_codex":0.00009237402,"about_ca_system_score_gemma":0.000108991066,"threshold_uncertainty_score":0.27878797},"labels":[],"label_agreement":null},{"id":"W1929821956","doi":"10.1016/j.celrep.2015.10.018","title":"An Antifungal Combination Matrix Identifies a Rich Pool of Adjuvant Molecules that Enhance Drug Activity against Diverse Fungal Pathogens","year":2015,"lang":"en","type":"article","venue":"Cell Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer; McGill University; McMaster University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Wellcome Trust","keywords":"Fluconazole; Clofazimine; Aspergillus fumigatus; Caspofungin; Microbiology; Candida albicans; Biology; Cryptococcosis; Antifungal drug; Cryptococcus neoformans; Miconazole; Pharmacology; Antifungal; Immunology","score_opus":0.020853768919422,"score_gpt":0.29548474422098386,"score_spread":0.2746309753015619,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1929821956","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945413,0.0005877641,0.0006462223,0.000059237955,0.00046506352,0.0005161917,0.000025277754,0.00008705928,0.0030719163],"genre_scores_gemma":[0.99648607,0.000091896385,0.00023416759,0.000038457012,0.00006118806,0.000010787802,0.00008400356,0.000028276794,0.0029651332],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975824,0.00014948587,0.00049479527,0.000601825,0.0008414467,0.00033009172],"domain_scores_gemma":[0.9977018,0.00005117915,0.00053459697,0.0008840128,0.00051822927,0.0003101662],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009892333,0.00024403771,0.0005388881,0.00012215877,0.00010277101,0.00003598618,0.00010669357,0.00013255326,0.000044043714],"category_scores_gemma":[0.0002940094,0.00022054497,0.00017613363,0.00022665424,0.00018042016,0.00037481377,0.00007811818,0.00023187663,0.000017748636],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034810396,0.0010526757,0.3974567,0.00028515796,0.000034112774,0.0021571997,0.00094706,0.000023622124,0.5944936,0.000011335513,0.0014616755,0.0017287337],"study_design_scores_gemma":[0.0005799302,0.00020218578,0.3256652,0.00010046774,0.0001344383,0.000069219495,0.0017314614,0.00029745372,0.67072386,0.00016533825,0.000106867396,0.0002235619],"about_ca_topic_score_codex":0.000110824585,"about_ca_topic_score_gemma":0.00007821961,"teacher_disagreement_score":0.076230265,"about_ca_system_score_codex":0.00013212733,"about_ca_system_score_gemma":0.000329524,"threshold_uncertainty_score":0.8993563},"labels":[],"label_agreement":null},{"id":"W1933326655","doi":"10.3109/13693786.2011.584218","title":"Invasive Myceliophthora thermophila infection mimicking invasive aspergillosis in a neutropenic patient: a new cause of cross-reactivity with the Aspergillus galactomannan serum antigen assay","year":2011,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Galactomannan; Aspergillosis; Voriconazole; Biology; Aspergillus; Cross-reactivity; Microbiology; Neutropenia; Malignancy; Immunology; Antigen; Cross reactions; Chemotherapy","score_opus":0.03707104337940514,"score_gpt":0.2938890728167935,"score_spread":0.25681802943738835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1933326655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99353224,0.00020106944,0.000049503935,0.0013202892,0.00017759875,0.0008343157,0.000008993864,0.000042523694,0.0038334874],"genre_scores_gemma":[0.9982271,0.00041506594,0.000063062456,0.0009970162,0.00009867111,0.000044166696,0.000011268586,0.0000366577,0.00010696502],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970188,0.00057455985,0.0005839064,0.0005797568,0.0006750836,0.0005678796],"domain_scores_gemma":[0.99766034,0.0007938878,0.00032744656,0.000597482,0.00026837268,0.000352486],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009146048,0.00030871367,0.00076407206,0.00021059532,0.00012978743,0.0000141683095,0.00025230844,0.00045225446,0.001325893],"category_scores_gemma":[0.00241897,0.00019017742,0.00017212043,0.0006587214,0.00085397036,0.00020453043,0.00016980559,0.000852808,0.000031919688],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018923141,0.00064597913,0.9748541,0.0001166913,0.00018627274,0.0008107884,0.002887121,0.0000023649352,0.01481918,0.0001470594,0.00019042808,0.003447694],"study_design_scores_gemma":[0.0018721917,0.0017906609,0.9732198,0.00029265688,0.0001158418,0.00020750242,0.00030275734,0.000018023049,0.0216643,0.00015875517,0.00016822215,0.00018929855],"about_ca_topic_score_codex":0.0039314106,"about_ca_topic_score_gemma":0.018008282,"teacher_disagreement_score":0.014076873,"about_ca_system_score_codex":0.00019196574,"about_ca_system_score_gemma":0.001282418,"threshold_uncertainty_score":0.99991053},"labels":[],"label_agreement":null},{"id":"W1933456933","doi":"10.4049/jimmunol.1400783","title":"Genetic Control of Susceptibility to <i>Candida albicans</i> in SM/J Mice","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; McGill Genome Centre; McGill University","funders":"","keywords":"Biology; Candida albicans; IRF8; Corpus albicans; Allele; Immunology; Myelopoiesis; Myeloid; Locus (genetics); Genetics; Molecular biology; Transcription factor; Microbiology; Gene; Haematopoiesis","score_opus":0.0074620605902955914,"score_gpt":0.2500786568078575,"score_spread":0.24261659621756193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1933456933","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921644,0.0013233842,0.0035361298,0.0021651273,0.00014012391,0.00019717737,0.0000024386295,0.0000033845306,0.00046785543],"genre_scores_gemma":[0.9985194,0.00016290815,0.00030184246,0.00082347967,0.000073839416,0.0000010277591,2.2638771e-7,0.00000818271,0.000109073735],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983849,0.00042342243,0.0006804292,0.00010029314,0.00018505719,0.0002259236],"domain_scores_gemma":[0.9985274,0.00046947692,0.00028301062,0.00039020917,0.00026375247,0.00006616304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016385686,0.000102049446,0.00055430894,0.000108140965,0.000027957562,0.0000024600188,0.00025388383,0.0000830158,0.00012704812],"category_scores_gemma":[0.00079583784,0.00006285019,0.00011760494,0.00017842662,0.00025270856,0.000031460393,0.00003103499,0.00036114553,0.000012495975],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006363981,0.0002562212,0.3199994,0.00004707071,0.00013032557,0.000013359715,0.0007810417,0.000071214214,0.6644366,0.00009905116,0.00025696433,0.007544783],"study_design_scores_gemma":[0.0026797527,0.0019457414,0.9851487,0.00009526338,0.00010943095,0.00014455333,0.00045689588,0.000036385703,0.007648207,0.00041188562,0.001259819,0.000063348416],"about_ca_topic_score_codex":0.00022268067,"about_ca_topic_score_gemma":0.0004599872,"teacher_disagreement_score":0.66514933,"about_ca_system_score_codex":0.00007561223,"about_ca_system_score_gemma":0.0001427264,"threshold_uncertainty_score":0.25629562},"labels":[],"label_agreement":null},{"id":"W1942573227","doi":"10.1128/aac.01250-15","title":"Multicenter Study of Epidemiological Cutoff Values and Detection of Resistance in Candida spp. to Anidulafungin, Caspofungin, and Micafungin Using the Sensititre YeastOne Colorimetric Method","year":2015,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Anidulafungin; Micafungin; Caspofungin; Microbiology; Biology; Candida dubliniensis; Candida parapsilosis; Corpus albicans; Candida krusei; Candida albicans; Antifungal; Amphotericin B","score_opus":0.041733980919089794,"score_gpt":0.34339955457642674,"score_spread":0.3016655736573369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1942573227","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976333,0.00041325763,0.0007446526,0.0004601604,0.0000445662,0.00066661683,0.000012975554,0.0000073966053,0.000017122291],"genre_scores_gemma":[0.9956638,0.0002716912,0.0031939787,0.0007114907,0.000029098064,0.0000020461227,0.000001651364,0.000012606796,0.00011362414],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988182,0.00017968476,0.00036025624,0.0003185705,0.00013639197,0.00018687912],"domain_scores_gemma":[0.99935406,0.0001215642,0.000119318946,0.00018065801,0.00011848837,0.000105922925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007319239,0.00015619968,0.0005130738,0.000119961354,0.000050898685,0.000009780401,0.000045070185,0.000082685074,0.0000052397463],"category_scores_gemma":[0.00014286973,0.00010616062,0.000038334692,0.00030750356,0.000116219206,0.00004444832,0.000043096476,0.00011818258,2.6771656e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027332336,0.00050517445,0.7811969,0.00013239103,0.0001044266,0.000021767584,0.0044481936,0.000018120389,0.20838529,0.000004182535,0.00051834853,0.0019320019],"study_design_scores_gemma":[0.0036361977,0.00063463324,0.96015424,0.00015274216,0.000110334084,0.000019828769,0.0032009524,0.0009133525,0.03071682,0.00002996842,0.00027649425,0.00015443577],"about_ca_topic_score_codex":0.00115064,"about_ca_topic_score_gemma":0.00059498125,"teacher_disagreement_score":0.17895737,"about_ca_system_score_codex":0.00004197076,"about_ca_system_score_gemma":0.000027342023,"threshold_uncertainty_score":0.43291044},"labels":[],"label_agreement":null},{"id":"W1945631808","doi":"10.1155/2010/357076","title":"Canadian Clinical Practice Guidelines for Invasive Candidiasis in Adults","year":2010,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University Health Centre; McGill University; University of Alberta; University of Toronto; Capital District Health Authority; CancerCare Manitoba; University of Alberta Hospital; University Health Network; Université de Montréal; St. Paul's Hospital; Hôpital Maisonneuve-Rosemont; Queen's University; Kingston General Hospital; University of Manitoba; University of British Columbia; Alberta Hospital Edmonton; Winnipeg Regional Health Authority","funders":"","keywords":"Intensive care medicine; Medicine; Epidemiology; Antifungal; Disease; Invasive candidiasis; Infectious disease (medical specialty); Population; Hematopoietic stem cell; Internal medicine; Haematopoiesis; Stem cell; Fluconazole; Dermatology; Environmental health","score_opus":0.019710015706849653,"score_gpt":0.3503378584745277,"score_spread":0.33062784276767804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1945631808","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9766195,0.0020045443,0.000024790224,0.019446915,0.0012062859,0.0002808312,0.0001337121,0.0000037981476,0.00027962608],"genre_scores_gemma":[0.98333013,0.0007871105,0.0003413241,0.014757979,0.00070790236,0.0000060779107,0.00002598367,0.000011458282,0.000032034422],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99846053,0.00008207151,0.0007649656,0.00020744157,0.00007050887,0.00041447545],"domain_scores_gemma":[0.9943968,0.00068892294,0.00018546726,0.00013753968,0.0014396515,0.0031515835],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0009401769,0.00012770259,0.00046882784,0.00029106473,0.00010274851,0.000017941267,0.00010149857,0.00035745287,0.00030795584],"category_scores_gemma":[0.05303671,0.000099907396,0.0001745282,0.00011817129,0.00037237298,0.000087523294,0.000008254805,0.00060337904,0.0000037542782],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003490808,0.00008477505,0.9469185,0.00009569629,0.00009533185,0.0010018285,0.0000972889,2.2520999e-7,0.00020861307,0.0001803298,0.025338925,0.025629435],"study_design_scores_gemma":[0.0066913655,0.0017724315,0.7176792,0.00068757473,0.00033170482,0.005702387,0.0011111725,0.000016089822,0.000030297915,0.00042257007,0.2652721,0.00028312512],"about_ca_topic_score_codex":0.2788477,"about_ca_topic_score_gemma":0.9810667,"teacher_disagreement_score":0.702219,"about_ca_system_score_codex":0.00018863233,"about_ca_system_score_gemma":0.016225638,"threshold_uncertainty_score":0.98935145},"labels":[],"label_agreement":null},{"id":"W1961089940","doi":"10.1111/cmi.12266","title":"Hsp90-dependent regulatory circuitry controlling temperature-dependent fungal development and virulence","year":2014,"lang":"en","type":"review","venue":"Cellular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Biology; Candida albicans; Virulence; Morphogenesis; Cryptococcus neoformans; Hsp90; Aspergillus fumigatus; Microbiology; Corpus albicans; Adaptation (eye); Host (biology); Fungal protein; Heat shock protein; Ecology; Genetics; Saccharomyces cerevisiae; Yeast; Gene","score_opus":0.022415580141083215,"score_gpt":0.27282554848080737,"score_spread":0.2504099683397242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1961089940","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013211275,0.9841266,0.00024843853,0.000015433594,0.0006276906,0.0012806868,0.00005853172,0.000091726164,0.00033961423],"genre_scores_gemma":[0.02255762,0.9706277,0.00026700893,0.0002843307,0.0004382488,0.00007695776,0.00058576296,0.00011126323,0.00505111],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959365,0.00045787537,0.0012783518,0.0013805234,0.00019123117,0.0007555144],"domain_scores_gemma":[0.99790525,0.00022684239,0.00048163318,0.000938325,0.00015048814,0.00029743285],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012207696,0.00081877154,0.0033608354,0.00022272058,0.00023807952,0.00004533314,0.00032888603,0.0013854122,0.00013723805],"category_scores_gemma":[0.00013549242,0.0006415198,0.00049032114,0.00012724962,0.00037662336,0.000041536132,0.00020569008,0.0012518166,0.00030717734],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028338374,0.00044500618,0.0008101997,0.062220864,0.0018496859,0.0012381795,0.00026100434,6.972369e-7,0.27422515,0.00048444374,0.0007804599,0.65740097],"study_design_scores_gemma":[0.0010619889,0.00013872558,0.000060086197,0.0065690195,0.0010481396,0.00093881745,0.000038119917,8.402102e-7,0.0055497275,0.000011454376,0.9838306,0.00075250445],"about_ca_topic_score_codex":0.00000486158,"about_ca_topic_score_gemma":0.000017459935,"teacher_disagreement_score":0.9830501,"about_ca_system_score_codex":0.0003915827,"about_ca_system_score_gemma":0.0009457843,"threshold_uncertainty_score":0.999911},"labels":[],"label_agreement":null},{"id":"W1962622268","doi":"10.1046/j.1469-0691.2001.00158.x","title":"In vitro activity of a new echinocandin, LY303366, and comparison with fluconazole, flucytosine and amphotericin B against Candida species† †This study was presented, in part, at the 37th ICAAC in Toronto, Canada, 28th September – 1st October 1997.","year":2001,"lang":"en","type":"article","venue":"Clinical Microbiology and Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Flucytosine; Amphotericin B; Fluconazole; Microbiology; Candida albicans; Minimum inhibitory concentration; Corpus albicans; Echinocandin; Biology; In vitro; Antibiotics; Antifungal; Biochemistry","score_opus":0.025818000272373475,"score_gpt":0.3220633306624764,"score_spread":0.2962453303901029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1962622268","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974598,0.000741984,0.0000069490093,0.00039204047,0.0001184293,0.0006484309,0.000025755484,0.000006051927,0.00060053106],"genre_scores_gemma":[0.99758464,0.00094233087,0.000007979123,0.00034805984,0.000056156314,0.000008694127,0.00003364583,0.0000079400215,0.0010105236],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983385,0.00034669976,0.00057061954,0.00043413957,0.00005455824,0.0002554449],"domain_scores_gemma":[0.9991437,0.00035587163,0.00015591561,0.00020643743,0.00003376355,0.000104316416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061508367,0.00018603078,0.00069751806,0.00004910237,0.00006919355,0.000007703087,0.00003596234,0.00018519124,0.00011829857],"category_scores_gemma":[0.00013548895,0.00012319398,0.000033450033,0.0001644237,0.00038691328,0.00009978474,0.00007739866,0.00042491767,7.2555446e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0047752243,0.000598552,0.964876,0.000034876535,0.000045722318,0.00002629366,0.00022284251,0.0000022410995,0.024969077,0.0000012931985,0.0026612214,0.0017866786],"study_design_scores_gemma":[0.004613819,0.00078097195,0.9833258,0.00008480302,0.000043880795,0.000042910393,0.0002813322,0.00007108342,0.0023133915,0.0000024899548,0.0083159385,0.0001236134],"about_ca_topic_score_codex":0.3901087,"about_ca_topic_score_gemma":0.97913474,"teacher_disagreement_score":0.58902603,"about_ca_system_score_codex":0.00030751378,"about_ca_system_score_gemma":0.00018700931,"threshold_uncertainty_score":0.61395264},"labels":[],"label_agreement":null},{"id":"W1963556653","doi":"10.1016/j.cyto.2008.11.011","title":"Farnesol promotes epithelial cell defense against Candida albicans through Toll-like receptor 2 expression, interleukin-6 and human β-defensin 2 production","year":2009,"lang":"en","type":"article","venue":"Cytokine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Farnesol; Candida albicans; TLR2; Corpus albicans; Microbiology; Innate immune system; Biology; Cell biology; Chemistry; Immune system; Immunology; Biochemistry","score_opus":0.014616973334691228,"score_gpt":0.26658804446868095,"score_spread":0.2519710711339897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963556653","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930254,0.0003757077,0.00011657071,0.0016629584,0.0002732095,0.00073623576,0.000035529516,0.0001461231,0.00362824],"genre_scores_gemma":[0.99277735,0.00014444784,0.0012726749,0.000784502,0.0006248051,0.000011951297,0.00013141561,0.000032288706,0.0042205723],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99806887,0.00008233316,0.00043618766,0.0006959994,0.00031495708,0.00040164127],"domain_scores_gemma":[0.9988742,0.00003146833,0.00014241484,0.0005844422,0.00018454569,0.0001829663],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002369845,0.00030419757,0.0004775335,0.0000744743,0.00025504126,0.00003591176,0.0000966627,0.00016256225,0.00016594918],"category_scores_gemma":[0.00018510835,0.00024100971,0.00010674198,0.00019920287,0.00020863293,0.00018778695,0.000043345266,0.0003316099,0.000035359502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059927756,0.00031043918,0.010677669,0.00011976249,0.000017613751,0.00004456439,0.0014332839,0.0000012098383,0.9760953,0.00005781549,0.006547153,0.004095865],"study_design_scores_gemma":[0.0028971091,0.001651483,0.07513043,0.0006377325,0.00014478716,0.00007295484,0.0009964579,0.000015102925,0.8558966,0.0005621371,0.06138729,0.00060790783],"about_ca_topic_score_codex":0.000071541464,"about_ca_topic_score_gemma":0.00012015206,"teacher_disagreement_score":0.12019874,"about_ca_system_score_codex":0.0001164794,"about_ca_system_score_gemma":0.0000871022,"threshold_uncertainty_score":0.98280907},"labels":[],"label_agreement":null},{"id":"W1963641561","doi":"10.1097/01.rti.0000213552.16011.ad","title":"Pulmonary Invasive Aspergillosis and Candidiasis in Immunocompromised Patients","year":2006,"lang":"en","type":"article","venue":"Journal of Thoracic Imaging","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver General Hospital","funders":"","keywords":"Halo sign; Medicine; Aspergillosis; Mycosis; Bronchoalveolar lavage; Pathology; Radiology; Differential diagnosis; Lung; Computed tomography; Internal medicine; Surgery; Immunology","score_opus":0.006148221830265259,"score_gpt":0.2725041925667888,"score_spread":0.26635597073652356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963641561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994894,0.0023290054,0.000035085963,0.00047543237,0.0000799334,0.00012571146,0.000001918544,0.000005013872,0.002053861],"genre_scores_gemma":[0.9987276,0.00017754424,0.0007638379,0.00013250239,0.00008409642,0.0000011971907,0.000003283013,0.0000114122595,0.0000984822],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989268,0.00005535426,0.00046430365,0.0001228136,0.00025226202,0.00017842122],"domain_scores_gemma":[0.99930894,0.00007966517,0.00022445062,0.0001131316,0.00020369347,0.00007012471],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036748717,0.000105354426,0.00031689668,0.0002007812,0.00004890268,0.00002761371,0.00005999814,0.000031865162,0.000024202092],"category_scores_gemma":[0.00016550836,0.00008433607,0.00009831783,0.00015878376,0.00006481355,0.00029567457,0.000027171922,0.00024336921,0.0000020765312],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000531072,0.00020040716,0.9506639,0.00009351513,0.000014959939,0.0003439006,0.000084641106,0.0000026490522,0.015353892,0.0000027143294,0.00009068511,0.03261764],"study_design_scores_gemma":[0.00070584076,0.000060101676,0.9919059,0.0004333855,0.000059434802,0.00016995346,0.00032923467,0.00008781751,0.005863358,0.00022536218,0.00007725055,0.00008235095],"about_ca_topic_score_codex":0.00016255573,"about_ca_topic_score_gemma":0.00002535437,"teacher_disagreement_score":0.041241985,"about_ca_system_score_codex":0.00014150816,"about_ca_system_score_gemma":0.00010289798,"threshold_uncertainty_score":0.3439125},"labels":[],"label_agreement":null},{"id":"W1963724640","doi":"10.1080/00313020500169222","title":"Fatal disseminated Blastoschizomyces capitatus (Geotrichum capitatum) in a patient with relapse of acute lymphoblastic leukaemia","year":2005,"lang":"en","type":"letter","venue":"Pathology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Alberta","keywords":"Medicine; Lymphoblastic Leukemia; Geotrichum; Oncology; Internal medicine; Leukemia; Biology; Microbiology","score_opus":0.0065683810391202945,"score_gpt":0.23917282003958484,"score_spread":0.23260443900046454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963724640","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9786923,0.0014202358,0.000055659413,0.017161962,0.0002529162,0.00073960476,0.00029790183,0.000061506755,0.0013179396],"genre_scores_gemma":[0.96669114,0.00034586005,0.0008474002,0.028519763,0.0003755432,0.000094284565,0.0009479713,0.00010477266,0.002073256],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99656576,0.00022528443,0.0008877038,0.0009413914,0.00054107694,0.0008388046],"domain_scores_gemma":[0.9979893,0.00033393202,0.0004710582,0.00082992425,0.00024631698,0.00012947294],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00018822354,0.00057654944,0.0014482244,0.0005264315,0.000048739978,0.000009901719,0.0002268942,0.0011282675,0.00017141593],"category_scores_gemma":[0.00024016389,0.00044571445,0.00021954597,0.00044019445,0.0006007783,0.00008168659,0.00009583648,0.0019229859,0.00007835657],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011863644,0.00203972,0.15837133,0.0043017343,0.0014556076,0.31617513,0.011290164,0.000041313666,0.02882403,0.000105678824,0.45741844,0.0081132],"study_design_scores_gemma":[0.029107071,0.030720588,0.74346757,0.009826668,0.008816526,0.03216802,0.004212948,0.00037681067,0.015419685,0.0005698767,0.11896068,0.0063535427],"about_ca_topic_score_codex":0.00010637702,"about_ca_topic_score_gemma":0.00029626008,"teacher_disagreement_score":0.58509624,"about_ca_system_score_codex":0.0003589865,"about_ca_system_score_gemma":0.00055203115,"threshold_uncertainty_score":0.9997995},"labels":[],"label_agreement":null},{"id":"W1964381316","doi":"10.1016/s1438-4221(01)80003-5","title":"Suppression of type 2 NO-synthase activity in macrophages by Candida albicans","year":2001,"lang":"en","type":"article","venue":"International Journal of Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Candida albicans; Corpus albicans; Biology; Microbiology; Effector; Hypha; Virulence; Macrophage; Nitric oxide synthase; Enzyme; In vitro; Biochemistry; Gene","score_opus":0.012238599878389801,"score_gpt":0.3277724839910165,"score_spread":0.3155338841126267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964381316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992694,0.0005769271,0.00022264154,0.0051998068,0.00084120984,0.000050745242,0.000030819578,0.0000028352795,0.00038101632],"genre_scores_gemma":[0.99765396,0.001169932,0.0001046249,0.00046357,0.0001982368,4.4892576e-7,0.000017032622,0.000005598645,0.00038657832],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988285,0.00010308167,0.00045236104,0.00012042628,0.00034970863,0.00014592787],"domain_scores_gemma":[0.9989327,0.00020009466,0.00022482626,0.00009028374,0.00041690236,0.00013518936],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005589675,0.000084221654,0.00033905587,0.00012082439,0.000009979309,0.0000035973123,0.00028492793,0.00018751522,0.0031303607],"category_scores_gemma":[0.0012853431,0.000059865437,0.0000954028,0.00008423478,0.0002116672,0.000052268846,0.0000538409,0.0004123488,0.000014060035],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037360997,0.00063330855,0.11142691,0.000020898631,0.000109979774,0.0008489615,0.000056836543,8.813796e-7,0.8575082,0.000016446289,0.014698006,0.010943507],"study_design_scores_gemma":[0.02046288,0.004171295,0.34772068,0.003046282,0.00016311294,0.008460541,0.000372438,0.0003546424,0.3112917,0.00027458798,0.3031708,0.00051105476],"about_ca_topic_score_codex":0.00024283429,"about_ca_topic_score_gemma":0.00011161896,"teacher_disagreement_score":0.5462165,"about_ca_system_score_codex":0.0001041609,"about_ca_system_score_gemma":0.00030395045,"threshold_uncertainty_score":0.9977809},"labels":[],"label_agreement":null},{"id":"W1964948648","doi":"10.1128/aem.07055-11","title":"Effect of Streptococcus salivarius K12 on the In Vitro Growth of Candida albicans and Its Protective Effect in an Oral Candidiasis Model","year":2012,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":125,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"University of Otago","keywords":"Candida albicans; Microbiology; Streptococcus salivarius; In vitro; Biology; Streptococcus; Bacteria; Biochemistry","score_opus":0.007212755387934513,"score_gpt":0.23360681036018305,"score_spread":0.22639405497224854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964948648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984427,0.00017813615,0.0000036759548,0.000023947316,0.000009096468,0.001158911,0.00007871253,0.000003058324,0.000101774735],"genre_scores_gemma":[0.9997325,0.000033176024,0.000010520072,0.00006440501,0.000008300741,0.00009676005,0.000039565515,0.000009591442,0.000005160141],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99917746,0.00013589863,0.00018700796,0.00022475413,0.0000400927,0.0002347986],"domain_scores_gemma":[0.99954414,0.00020524941,0.000060423507,0.00012919724,0.0000017897356,0.000059213347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043409388,0.00015540338,0.0004192871,0.00005368061,0.00002567717,0.0000015030554,0.00004369002,0.00011955577,0.000016656528],"category_scores_gemma":[0.00001820791,0.00009664028,0.00003113569,0.000050338153,0.0002622519,0.00003293271,0.000043751417,0.00017859106,0.0000012160214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018400425,0.00013898363,0.245843,0.00008546223,0.000017077522,0.0000010539013,0.00037498475,0.0000030322994,0.7504166,0.00008005095,0.0000013179833,0.0011984237],"study_design_scores_gemma":[0.0017491081,0.0012304183,0.30163127,0.000026388903,0.00003966681,0.0000039383217,0.00017421818,0.00010484441,0.694922,0.000030761785,0.0000011691751,0.00008622017],"about_ca_topic_score_codex":0.00023480515,"about_ca_topic_score_gemma":0.00010437681,"teacher_disagreement_score":0.05578829,"about_ca_system_score_codex":0.00007085315,"about_ca_system_score_gemma":0.000010119868,"threshold_uncertainty_score":0.3940876},"labels":[],"label_agreement":null},{"id":"W1965757011","doi":"10.1016/j.jval.2011.08.217","title":"PIN30 Cost Analysis of Voriconazole Versus Itraconazole for Prophylaxis of Invasive Fungal Infection (IFI) in Allogeneic Hematopoietic Stem Cell Transplant (HSCT) in Canada, France, Germany, and the United States","year":2011,"lang":"en","type":"article","venue":"Value in Health","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Voriconazole; Medicine; Itraconazole; Tolerability; Internal medicine; Concomitant; Hematopoietic stem cell transplantation; Clinical trial; Randomized controlled trial; Surgery; Gastroenterology; Adverse effect; Antifungal; Transplantation; Dermatology","score_opus":0.03852618626752976,"score_gpt":0.2633188192122173,"score_spread":0.22479263294468751,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965757011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971838,0.0011527009,0.00007300147,0.000098718345,0.00006708451,0.0012471164,0.00013255324,0.0000038818785,0.000041146413],"genre_scores_gemma":[0.9984095,0.0013128916,0.000038553007,0.000100730256,0.0000060838865,0.000061606544,0.000047759615,0.000009766224,0.000013105062],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99816513,0.00027126976,0.0008081982,0.00024669178,0.00021959147,0.0002891428],"domain_scores_gemma":[0.99864644,0.00068659475,0.00025516585,0.00022821705,0.000098234894,0.000085365595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000979422,0.00013554197,0.00070529623,0.00044069823,0.00003197545,0.000002209692,0.00007407669,0.00007119389,0.000010405035],"category_scores_gemma":[0.000035201858,0.00010397685,0.00008276127,0.0011704852,0.000120228266,0.00003965397,0.000011364472,0.00021005128,1.8156435e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029731584,0.00023400958,0.9837424,0.0021132901,0.000107584456,0.000011574365,0.0066927,0.0033827461,0.0002671173,0.00017866936,0.000005472207,0.000291281],"study_design_scores_gemma":[0.005039652,0.00045867855,0.98118746,0.00027529546,0.00014360332,0.0000012687743,0.001851953,0.007849908,0.0030222882,0.00005940445,0.000014920462,0.000095548225],"about_ca_topic_score_codex":0.8823194,"about_ca_topic_score_gemma":0.8695489,"teacher_disagreement_score":0.012770494,"about_ca_system_score_codex":0.00033872577,"about_ca_system_score_gemma":0.0012266266,"threshold_uncertainty_score":0.42400527},"labels":[],"label_agreement":null},{"id":"W1966690773","doi":"10.1128/jcm.00863-06","title":"<i>Candida rugosa</i> , an Emerging Fungal Pathogen with Resistance to Azoles: Geographic and Temporal Trends from the ARTEMIS DISK Antifungal Surveillance Program","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Peking Union Medical College; Peking Union Medical College Hospital; Universidad de Buenos Aires; University of Alberta; Pfizer","keywords":"Voriconazole; Candida rugosa; Fluconazole; Candida krusei; Rugosa; Candida glabrata; Biology; Microbiology; Azole; Antifungal; Botany","score_opus":0.022044259125334874,"score_gpt":0.3416325259626754,"score_spread":0.31958826683734054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1966690773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99337995,0.0021530846,0.00016947508,0.0033380997,0.00025274762,0.00025551012,0.00019820617,0.000029866738,0.00022303098],"genre_scores_gemma":[0.9945366,0.00024086265,0.002977921,0.0008971832,0.00097285927,0.00000528499,0.00008526865,0.000025104666,0.000258936],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968019,0.00054141035,0.0015338664,0.00050199335,0.00017940681,0.00044142694],"domain_scores_gemma":[0.99748254,0.0006886432,0.00072795677,0.0004738425,0.00032664524,0.0003003551],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020632308,0.00027274145,0.0010807243,0.000097243654,0.00016146012,0.00004840449,0.00027142162,0.00023886826,0.000047093265],"category_scores_gemma":[0.00028552266,0.00015317704,0.00031657118,0.00035132165,0.00064408424,0.000111335416,0.00005424915,0.00084994506,0.000003254173],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0042821397,0.00048747007,0.9637165,0.000020102823,0.0001352759,0.00015418867,0.00005574472,0.000001922766,0.017505575,0.000020364927,0.0034652287,0.0101555],"study_design_scores_gemma":[0.0022745763,0.0020154805,0.9554799,0.00018020632,0.00012958558,0.00018694389,0.00017599323,0.0000052983037,0.00014578522,0.000095482355,0.03911662,0.0001941367],"about_ca_topic_score_codex":0.00012999534,"about_ca_topic_score_gemma":0.0047777905,"teacher_disagreement_score":0.035651393,"about_ca_system_score_codex":0.00002496297,"about_ca_system_score_gemma":0.00019533435,"threshold_uncertainty_score":0.62463784},"labels":[],"label_agreement":null},{"id":"W1967165906","doi":"10.3129/i06-076","title":"Blastoschizomyces capitatus keratitis and melting in a corneal graft","year":2006,"lang":"en","type":"article","venue":"Canadian Journal of Ophthalmology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Keratitis; Fungal keratitis; Ophthalmology; Medicine; Computer science","score_opus":0.012819784720682247,"score_gpt":0.2554826366889868,"score_spread":0.24266285196830456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967165906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9871847,0.0023202822,0.000008165006,0.00039723064,0.00015458945,0.00006997587,0.000006241678,0.0000013422585,0.009857499],"genre_scores_gemma":[0.9986088,0.000006652203,0.0005672282,0.00004231294,0.00012784716,7.9759513e-7,0.0000024094852,0.000008667468,0.0006352458],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99909645,0.000057760742,0.00035200384,0.000120418896,0.000080603466,0.00029278293],"domain_scores_gemma":[0.9992981,0.000074212505,0.000107323074,0.0000850963,0.00011079926,0.0003244532],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026871954,0.00008994784,0.00031334153,0.0002463031,0.000057109715,0.000016420627,0.00005359027,0.000093054354,0.00033695673],"category_scores_gemma":[0.00019792082,0.00008074814,0.00005345009,0.000116161566,0.000195597,0.00007102763,0.000005051749,0.00027135242,0.0000039261477],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006591303,0.000016595013,0.9579077,0.000024057537,0.000011721739,0.040516358,0.00015727711,0.00000591813,0.00053321366,0.0003198976,0.0002557506,0.0001856301],"study_design_scores_gemma":[0.0006958399,0.0003663943,0.90910816,0.00007119074,0.000017226124,0.08820803,0.00023008574,0.00001682485,0.0001018712,0.0009650627,0.00015404764,0.00006525147],"about_ca_topic_score_codex":0.019566672,"about_ca_topic_score_gemma":0.026612848,"teacher_disagreement_score":0.048799485,"about_ca_system_score_codex":0.00010577795,"about_ca_system_score_gemma":0.0008510922,"threshold_uncertainty_score":0.99114895},"labels":[],"label_agreement":null},{"id":"W1967296772","doi":"10.1007/s11255-011-0078-8","title":"Renal mucormycosis in aplastic anemia: a novel presentation","year":2011,"lang":"en","type":"article","venue":"International Urology and Nephrology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Medicine; Aplastic anemia; Nephrology; Mucormycosis; Presentation (obstetrics); Internal medicine; Intensive care medicine; Pathology; Surgery; Bone marrow","score_opus":0.030176761309888993,"score_gpt":0.2808137824726114,"score_spread":0.2506370211627224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967296772","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906486,0.00012343287,0.0015125778,0.0016523012,0.00017968769,0.00011668757,0.000006066507,0.00001808329,0.0057425136],"genre_scores_gemma":[0.99647176,0.000053649273,0.0005508975,0.0026059777,0.0000753792,0.000018207948,0.000018082039,0.000005464757,0.00020060677],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999275,0.00003213836,0.00021080024,0.00024096637,0.00008207098,0.00015900942],"domain_scores_gemma":[0.99962497,0.00012592402,0.00004868715,0.00009067808,0.00005969371,0.000050030634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013672454,0.000081649254,0.00015829052,0.00014649918,0.000024598377,0.0000025711222,0.00006542225,0.00016954543,0.0005222387],"category_scores_gemma":[0.0001466846,0.00007377745,0.000030464762,0.00006054908,0.00019638143,0.00007057737,0.000037942296,0.00021304187,0.000026501477],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040603536,0.00032966604,0.960572,0.000011718892,0.00006400897,0.00014512062,0.00045573735,0.0000032673609,0.021825181,0.0112521015,0.00027865137,0.0010021778],"study_design_scores_gemma":[0.0014258487,0.00041165357,0.99289966,0.0000042117927,0.00003243689,0.00026419573,0.0000337717,0.00056575704,0.00037506982,0.0023371817,0.0015940694,0.00005613968],"about_ca_topic_score_codex":0.00013845164,"about_ca_topic_score_gemma":0.000630574,"teacher_disagreement_score":0.03232765,"about_ca_system_score_codex":0.000021093145,"about_ca_system_score_gemma":0.00003870907,"threshold_uncertainty_score":0.5718148},"labels":[],"label_agreement":null},{"id":"W1967553796","doi":"10.1007/s00280-005-0011-x","title":"Role of plasma lipids and lipoproteins in predicting amphotericin B-induced nephrotoxicity in pediatric oncology patients","year":2005,"lang":"en","type":"article","venue":"Cancer Chemotherapy and Pharmacology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; University of British Columbia","funders":"","keywords":"Nephrotoxicity; Creatinine; Amphotericin B; Triglyceride; Internal medicine; Lipoprotein; Cholesterol; High-density lipoprotein; Chemistry; Potassium; Medicine; Endocrinology; Toxicity; Antifungal","score_opus":0.013240641704968551,"score_gpt":0.3142373012587358,"score_spread":0.30099665955376725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967553796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971365,0.0012301549,0.0000017654226,0.0005433286,0.00008799554,0.00066869764,0.0000083224,0.000012273448,0.00031100155],"genre_scores_gemma":[0.9940314,0.004146454,0.00012614205,0.0012563963,0.00031885685,0.00007647307,0.0000026932987,0.000013154854,0.000028404791],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989217,0.00008074736,0.00035502226,0.00029290083,0.00009076728,0.00025885648],"domain_scores_gemma":[0.9995791,0.0000891572,0.000117079384,0.00007927293,0.000041311763,0.000094120885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022011573,0.00013895739,0.00042094736,0.00013911571,0.00002836018,0.000002627896,0.00005034316,0.00018391464,0.00018561694],"category_scores_gemma":[0.00001889723,0.00012974063,0.000036248304,0.00021571998,0.00009357389,0.00007266524,0.000025383506,0.00028398505,5.849308e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015899775,0.00035948874,0.6700474,0.00012000259,0.000018268276,0.0000023865537,0.0012973559,0.000004239142,0.24633093,0.0000017240486,0.000039297618,0.08018892],"study_design_scores_gemma":[0.0090107005,0.0007135963,0.81428003,0.000034571214,0.000040283732,0.000002631727,0.00012205511,0.0009339947,0.17305501,0.000022485625,0.0016718704,0.000112785136],"about_ca_topic_score_codex":0.00030755505,"about_ca_topic_score_gemma":0.0010779448,"teacher_disagreement_score":0.1442326,"about_ca_system_score_codex":0.00017700606,"about_ca_system_score_gemma":0.00015345708,"threshold_uncertainty_score":0.5290669},"labels":[],"label_agreement":null},{"id":"W1967749841","doi":"10.1111/myc.12212","title":"Treatment and outcomes of invasive fusariosis: review of 65 cases from the <scp>PATH</scp> Alliance<sup>®</sup> registry","year":2014,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"University of Texas MD Anderson Cancer Center; Astellas Pharma; City of Hope; University of Arkansas for Medical Sciences; Thomas Jefferson University; Johns Hopkins University; School of Medicine, Oregon Health and Science University; University of Minnesota; University of Washington; University of Nebraska Medical Center; Emory University; Massachusetts General Hospital","keywords":"Fusariosis; Internal medicine; Posaconazole; Medicine; Galactomannan; Mucormycosis; Voriconazole; Aspergillosis; Fusarium; Mortality rate; Case fatality rate; Gastroenterology; Epidemiology; Immunology; Surgery; Biology; Dermatology; Antifungal","score_opus":0.026859984829562797,"score_gpt":0.2847724786274619,"score_spread":0.2579124937978991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967749841","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9196348,0.0778865,0.000010073924,0.00068811787,0.000027788066,0.0004172031,0.0001451982,0.000016407466,0.0011739128],"genre_scores_gemma":[0.92315847,0.074536294,0.00024194336,0.0011366816,0.00006370871,0.000024058721,0.00004041496,0.0000124138405,0.00078601285],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987629,0.000119615186,0.00042378993,0.00028520255,0.00023354957,0.0001749517],"domain_scores_gemma":[0.9965422,0.0022848123,0.00023061575,0.0007190639,0.00013814503,0.00008516048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022325695,0.00019352484,0.0007679555,0.000014013048,0.000057209574,0.000007936187,0.000121746205,0.00007196018,0.000052105926],"category_scores_gemma":[0.0040992056,0.000108148626,0.00018728865,0.00009429164,0.00023465882,0.000051201692,0.000043152177,0.00008806062,0.000010220042],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034778455,0.00024273725,0.98331374,0.0024381692,0.00024044291,0.0000231754,0.0006877707,7.1115085e-7,0.0014269707,0.00012246393,0.0062617855,0.005207275],"study_design_scores_gemma":[0.0013971864,0.000961111,0.9419482,0.008070255,0.0009354176,0.000024280549,0.0024266655,0.000019109199,0.012479736,0.00026677336,0.031383168,0.00008810335],"about_ca_topic_score_codex":0.00077357027,"about_ca_topic_score_gemma":0.00020523723,"teacher_disagreement_score":0.041365527,"about_ca_system_score_codex":0.000038678587,"about_ca_system_score_gemma":0.00011790194,"threshold_uncertainty_score":0.49074283},"labels":[],"label_agreement":null},{"id":"W1967971627","doi":"10.2174/1874437000701010001","title":"Engineered Keratinized Oral Mucosa Decreased C. albicans Transition Through the Production of Keratins 10, 14, 16, and 19 by Oral Epithelial Cells","year":2007,"lang":"en","type":"article","venue":"The Open Mycology Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Candida albicans; Keratin; Oral mucosa; Corpus albicans; Biology; Transition (genetics); Microbiology; Pathology; Anatomy; Biochemistry; Medicine; Genetics","score_opus":0.023354506247027933,"score_gpt":0.30802916877318426,"score_spread":0.2846746625261563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967971627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9835683,0.0003109335,0.005275601,0.008076582,0.00037636515,0.0009862799,0.000027919537,0.000012437297,0.0013655518],"genre_scores_gemma":[0.9949345,0.0002131263,0.0016472893,0.0009926836,0.00024979946,0.000008569519,0.000022609454,0.000016186113,0.0019152182],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982354,0.00042256786,0.0005309298,0.00023005996,0.00026408874,0.00031697092],"domain_scores_gemma":[0.9988042,0.00031471357,0.00021768532,0.00029190432,0.00023768896,0.00013378082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029848253,0.00017095917,0.0004310994,0.000036551406,0.0004812691,0.000056324985,0.00024477186,0.00013209617,0.00087783067],"category_scores_gemma":[0.00043486807,0.000092898015,0.00009954381,0.00018148992,0.0004205168,0.00019764781,0.000039113358,0.0005362471,0.0000081789285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010975618,0.000619367,0.001301656,0.000046644152,0.0003289633,0.000053478263,0.0047656763,0.000045929744,0.90669376,0.00044487749,0.07010442,0.004619628],"study_design_scores_gemma":[0.02753529,0.0069811316,0.097018614,0.0003714762,0.0023788235,0.0048139226,0.016976582,0.00066385756,0.75495785,0.0061492617,0.08110895,0.0010442244],"about_ca_topic_score_codex":0.0002356239,"about_ca_topic_score_gemma":0.0005317391,"teacher_disagreement_score":0.15173587,"about_ca_system_score_codex":0.00008233238,"about_ca_system_score_gemma":0.00025819585,"threshold_uncertainty_score":0.96116304},"labels":[],"label_agreement":null},{"id":"W1968721620","doi":"10.1016/j.ijid.2014.07.007","title":"Salvage combination antifungal therapy for acute invasive aspergillosis may improve outcomes: a systematic review and meta-analysis","year":2014,"lang":"en","type":"review","venue":"International Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Medicine; Internal medicine; Echinocandin; Confidence interval; Aspergillosis; Meta-analysis; Odds ratio; Observational study; Salvage therapy; Combination therapy; Amphotericin B; Surgery; Antifungal; Fluconazole; Chemotherapy; Immunology","score_opus":0.04087198661439267,"score_gpt":0.39504594530505754,"score_spread":0.35417395869066487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968721620","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012840709,0.9950156,0.0005838257,0.00042744947,0.00027781966,0.0026570838,0.00083661475,0.00002380951,0.000049346498],"genre_scores_gemma":[0.011963344,0.98538995,0.00005066939,0.0014535409,0.00011686954,0.00029179532,0.00019688849,0.00004609772,0.00049085956],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9961345,0.00039663355,0.0020291673,0.00039463863,0.00084976846,0.0001952517],"domain_scores_gemma":[0.9931069,0.0013987126,0.0028118263,0.00040902605,0.0020444852,0.00022906775],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008723078,0.00053082017,0.008437417,0.0007317234,0.00007784343,0.00012581713,0.00035626625,0.00017283621,0.00017583247],"category_scores_gemma":[0.002306301,0.0003067416,0.0076946625,0.00031355946,0.00009272069,0.00021916865,0.0000532378,0.0003046261,0.000007840488],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007720443,0.00060476066,0.0031521267,0.3422727,0.65063936,0.000073013725,0.00001519033,3.0882126e-7,0.0000013661202,0.00014240615,0.00039632033,0.0026252773],"study_design_scores_gemma":[0.0009800821,0.0005338455,0.0007148203,0.020094497,0.974245,0.0001966285,0.000008744227,0.0000023442146,0.0000020246523,0.00012146817,0.0028216909,0.00027886135],"about_ca_topic_score_codex":0.000009355386,"about_ca_topic_score_gemma":0.00001090237,"teacher_disagreement_score":0.32360566,"about_ca_system_score_codex":0.00029788126,"about_ca_system_score_gemma":0.00042313564,"threshold_uncertainty_score":0.9999385},"labels":[],"label_agreement":null},{"id":"W1968898131","doi":"10.1371/journal.pone.0018957","title":"Genetic Control of Susceptibility to Infection with Candida albicans in Mice","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Locus (genetics); Allele; Genetics; Corpus albicans; Haplotype; Inbred strain; Genetic linkage; Microbiology; Gene","score_opus":0.039436626644212346,"score_gpt":0.2366730685312036,"score_spread":0.19723644188699124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968898131","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99638,0.000045058685,0.0006423377,0.000089243134,0.000008909345,0.0006639548,0.000009076124,0.000021439077,0.0021400212],"genre_scores_gemma":[0.9975268,0.000016644606,0.0020204685,0.00016361017,0.00002537348,0.000025630821,0.0000019039857,0.000010946973,0.0002086162],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99903476,0.000052394014,0.00024800227,0.00024142776,0.00023733839,0.00018606125],"domain_scores_gemma":[0.9993326,0.000037026788,0.00005319967,0.00029454872,0.00016473564,0.00011787181],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020387318,0.000095379175,0.00034969868,0.000078607154,0.000016978256,0.0000020815125,0.00004352921,0.000055743647,0.0003322517],"category_scores_gemma":[0.00016111632,0.000076935095,0.000035180507,0.00022800374,0.00008087339,0.00003626655,0.00001049981,0.00012099319,0.000020079535],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014725147,0.0017032629,0.8843654,0.00020813743,0.000070764625,0.000008400102,0.0005172038,0.0000013011247,0.11143597,0.000015701373,0.000006638984,0.00019471828],"study_design_scores_gemma":[0.0012366481,0.0011083758,0.9644499,0.00022918949,0.0001433121,9.978913e-7,0.00006737496,0.000043341563,0.03260203,0.000036133544,0.0000051751376,0.00007752665],"about_ca_topic_score_codex":0.0043519284,"about_ca_topic_score_gemma":0.022115989,"teacher_disagreement_score":0.08008451,"about_ca_system_score_codex":0.00008618605,"about_ca_system_score_gemma":0.00009867821,"threshold_uncertainty_score":0.99572784},"labels":[],"label_agreement":null},{"id":"W1968911442","doi":"10.1002/pmic.200500100","title":"Proteomic analysis of <b><i>Candida albicans</i></b> yeast and hyphal cell wall and associated proteins","year":2006,"lang":"en","type":"article","venue":"PROTEOMICS","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; National Research Council Canada; Dalhousie University; Institute for Marine Biosciences","funders":"","keywords":"Yeast; Candida albicans; Cell wall; Trypsin; Microbiology; Biochemistry; Biology; Corpus albicans; Hypha; Cyanogen bromide; Chemistry; Enzyme; Peptide sequence; Gene","score_opus":0.006833561704360216,"score_gpt":0.2249611082867009,"score_spread":0.21812754658234068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968911442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960809,0.00020838088,0.00045355485,0.00019912231,0.000011036587,0.0014812897,0.000076853124,0.00003650328,0.0014523567],"genre_scores_gemma":[0.99478453,0.00005621226,0.0037599828,0.00006611061,0.000030478572,0.000069075744,0.000056018333,0.000020241992,0.0011573483],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99868375,0.000039818256,0.00038828756,0.00037378413,0.00024804255,0.00026631125],"domain_scores_gemma":[0.9992586,0.000025778747,0.0002035496,0.00026645363,0.00013314544,0.000112472735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003464075,0.00018075912,0.0005813379,0.00017859793,0.0000738751,0.000022600667,0.00006110329,0.0001445261,0.000044486602],"category_scores_gemma":[0.000095718286,0.00015815052,0.00012437343,0.00045851164,0.00020532565,0.00006864547,0.00004576689,0.00019105646,0.0000020397324],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031628224,0.0002741906,0.64703095,0.00018874124,0.00021554485,0.000008470303,0.00011178576,0.000006647732,0.35141215,0.000097498225,0.00004818728,0.00028958893],"study_design_scores_gemma":[0.0015135861,0.00026181154,0.91354567,0.0000613753,0.0009656775,0.0000037259258,0.000044295866,0.0016696642,0.08134967,0.0003171837,0.000079709054,0.00018765785],"about_ca_topic_score_codex":0.0011159583,"about_ca_topic_score_gemma":0.0005539544,"teacher_disagreement_score":0.27006248,"about_ca_system_score_codex":0.000076572316,"about_ca_system_score_gemma":0.000111802416,"threshold_uncertainty_score":0.6449191},"labels":[],"label_agreement":null},{"id":"W1969576145","doi":"10.1159/000239344","title":"In vitro Susceptibility of Mucor ramosissimus Samutsevitsch, a Rare Fungal Pathogen, to Antimycotics","year":2009,"lang":"en","type":"article","venue":"Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Miconazole; Ketoconazole; Amphotericin B; Itraconazole; Microbiology; Clotrimazole; Fluconazole; Fungicide; Biology; Pharmacology; In vitro; Minimum inhibitory concentration; Pathogen; Chemistry; Antifungal; Antimicrobial; Botany; Biochemistry","score_opus":0.013862083544613405,"score_gpt":0.2980437367848325,"score_spread":0.2841816532402191,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969576145","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938347,0.00038626484,0.0004392655,0.0030992336,0.000089837224,0.0007517681,0.000039964325,0.00005182222,0.0013071777],"genre_scores_gemma":[0.9890819,0.0001336321,0.0040191854,0.0059050974,0.00013418579,0.000005446627,0.000018360255,0.000024801391,0.0006773639],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980858,0.000058857167,0.0005553566,0.0005108305,0.00036388423,0.00042528147],"domain_scores_gemma":[0.99864763,0.000076235825,0.000098589924,0.00075816293,0.00018484681,0.00023455881],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043873923,0.00024904523,0.0006991057,0.0001377205,0.00003771843,0.000012077064,0.0001698626,0.00017523268,0.00030753392],"category_scores_gemma":[0.00024357397,0.0002183414,0.00022141848,0.00056705443,0.0000922284,0.000095815456,0.000017547716,0.00024642434,0.000024559286],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033525785,0.00083072623,0.09394965,0.00011831155,0.000019181354,0.000055359014,0.00061922637,0.0000026303178,0.8752375,0.000038305658,0.00144213,0.024334349],"study_design_scores_gemma":[0.002432817,0.0006769646,0.5216643,0.000117946154,0.000022065069,0.000011756966,0.0002034446,0.00006964225,0.47151557,0.00027660234,0.0027839276,0.00022496634],"about_ca_topic_score_codex":0.000020846737,"about_ca_topic_score_gemma":0.00003290567,"teacher_disagreement_score":0.42771465,"about_ca_system_score_codex":0.00012382602,"about_ca_system_score_gemma":0.0001573902,"threshold_uncertainty_score":0.89037037},"labels":[],"label_agreement":null},{"id":"W1971063813","doi":"10.1016/j.phymed.2011.01.013","title":"Inhibition of Candida albicans biofilm formation and yeast-hyphal transition by 4-hydroxycordoin","year":2011,"lang":"en","type":"article","venue":"Phytomedicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Ministère du Développement Économique, de l’Innovation et de l’Exportation","keywords":"Biofilm; Candida albicans; Microbiology; Hypha; Yeast; Corpus albicans; Biology; Virulence; Minimum inhibitory concentration; Transition (genetics); Chemistry; Bacteria; Antimicrobial; Biochemistry","score_opus":0.01886991005236533,"score_gpt":0.24505248373083516,"score_spread":0.22618257367846983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971063813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906219,0.00047848778,0.0024378048,0.00036063016,0.000049823262,0.00027415127,0.000051699295,0.000032168322,0.0056933244],"genre_scores_gemma":[0.99885726,0.00019573231,0.00023881167,0.00032158828,0.00007371335,0.000009325807,0.0001415984,0.000010144868,0.00015185267],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991374,0.000016776858,0.0002927941,0.00016684378,0.00023079266,0.0001554116],"domain_scores_gemma":[0.99954563,0.000015125935,0.00008713669,0.00014998676,0.0000828823,0.00011924382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018969837,0.00010813644,0.00027195344,0.00009162575,0.000034698107,0.000001998861,0.000021874854,0.000065840475,0.00030158568],"category_scores_gemma":[0.000032592176,0.00008762745,0.00004349583,0.00017015204,0.00018230012,0.00015278523,0.0000070642104,0.000106054766,0.000007001426],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015605896,0.0005287833,0.028792692,0.0009910528,0.00006320461,0.0000362049,0.00703542,1.5844797e-7,0.9357722,0.00010059944,0.004845398,0.020273695],"study_design_scores_gemma":[0.0075948136,0.0029540411,0.30547455,0.0010190328,0.0004056909,0.00014094565,0.0032817638,0.0007795307,0.6750931,0.00096993847,0.0019403691,0.00034619778],"about_ca_topic_score_codex":0.00025625815,"about_ca_topic_score_gemma":0.00006252651,"teacher_disagreement_score":0.27668184,"about_ca_system_score_codex":0.000036795645,"about_ca_system_score_gemma":0.000031710904,"threshold_uncertainty_score":0.35733435},"labels":[],"label_agreement":null},{"id":"W1971854196","doi":"10.12968/hmed.2014.75.5.271","title":"New fungal diagnostics","year":2014,"lang":"en","type":"review","venue":"British Journal of Hospital Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Intensive care medicine; Disease; Pathology","score_opus":0.022628206134889445,"score_gpt":0.33045019778662205,"score_spread":0.30782199165173263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971854196","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000985199,0.994129,0.0006517107,0.00045120588,0.002520237,0.00053560315,0.000017579765,0.000023198889,0.0015729229],"genre_scores_gemma":[0.00024467122,0.98874253,0.0007533914,0.00020603136,0.0076883463,0.000003275051,0.000037439993,0.00008685537,0.0022374424],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99586374,0.0001503428,0.0020995375,0.00036029314,0.0010926911,0.0004333822],"domain_scores_gemma":[0.9960213,0.0006792814,0.0014140843,0.00039922513,0.0005943178,0.0008918289],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010674791,0.00046514088,0.004660246,0.00023620893,0.00007454523,0.00003833974,0.0003929866,0.0004296165,0.0007274781],"category_scores_gemma":[0.0062931897,0.00036449934,0.0010861899,0.0003567026,0.00026613992,0.00011321255,0.00006202361,0.0017098592,0.000071306145],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024314862,0.00012253196,0.0003122505,0.007690635,0.0002624712,0.0053314967,0.00002346486,1.4673644e-8,9.215042e-8,0.000025664125,0.1712599,0.8149472],"study_design_scores_gemma":[0.0013180358,0.0038205767,0.0014226999,0.1419472,0.0033453885,0.011347396,0.000041218416,1.7066368e-7,2.3819828e-7,0.00008652368,0.83640134,0.00026918537],"about_ca_topic_score_codex":0.00007053349,"about_ca_topic_score_gemma":0.00001628214,"teacher_disagreement_score":0.814678,"about_ca_system_score_codex":0.00020202923,"about_ca_system_score_gemma":0.0011508112,"threshold_uncertainty_score":0.9998807},"labels":[],"label_agreement":null},{"id":"W1973282809","doi":"10.1592/phco.31.2.214","title":"Therapeutic Drug Monitoring of Voriconazole and Posaconazole","year":2011,"lang":"en","type":"review","venue":"Pharmacotherapy The Journal of Human Pharmacology and Drug Therapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"","keywords":"Posaconazole; Voriconazole; Therapeutic drug monitoring; Medicine; Drug; Context (archaeology); Pharmacodynamics; Intensive care medicine; Pharmacology; Pharmacokinetics; Antifungal; Biology; Dermatology","score_opus":0.07690676226506356,"score_gpt":0.40818134447309184,"score_spread":0.3312745822080283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973282809","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.122200206,0.87602943,0.000007621259,0.00016311792,0.0006465217,0.00079189206,0.000012515279,0.000017463512,0.00013120472],"genre_scores_gemma":[0.095238216,0.9027719,0.00003858107,0.00048467235,0.00081108004,0.000016123155,0.0000022508923,0.00007973053,0.0005574407],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965445,0.0010382538,0.0013769087,0.00031452422,0.00031677898,0.00040906086],"domain_scores_gemma":[0.99697286,0.00068669196,0.0015211488,0.00028736566,0.00027935233,0.0002525746],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0021813917,0.0006090391,0.0023500952,0.0003388023,0.00029225313,0.000019151421,0.00047651964,0.0001915064,0.00059357076],"category_scores_gemma":[0.0000067894016,0.00035503868,0.00059774634,0.00022479154,0.0007064874,0.00018068173,0.000057478293,0.0013525791,0.0000032878402],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031615198,0.0009555816,0.0055770637,0.004678608,0.004713679,0.00006199075,0.0044778353,2.9430691e-7,0.03025808,0.000109509296,0.0026398222,0.943366],"study_design_scores_gemma":[0.010456873,0.0013527361,0.0026070531,0.003810437,0.0076565947,0.0010289438,0.0006633137,0.0000035152657,0.019209633,0.00084685796,0.9515642,0.00079984876],"about_ca_topic_score_codex":0.000017476945,"about_ca_topic_score_gemma":0.0000011793493,"teacher_disagreement_score":0.94892436,"about_ca_system_score_codex":0.00006566725,"about_ca_system_score_gemma":0.000302456,"threshold_uncertainty_score":0.99989015},"labels":[],"label_agreement":null},{"id":"W1973285175","doi":"10.1128/jb.182.6.1515-1522.2000","title":"Evolution of Drug Resistance in Experimental Populations of <i>Candida albicans</i>","year":2000,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":207,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Pfizer Canada; Pfizer","keywords":"Biology; Fluconazole; Candida albicans; Drug resistance; Azole; Microbiology; Antifungal drug; Genetics; Itraconazole; Gene; Ketoconazole; Antifungal","score_opus":0.015134127031319018,"score_gpt":0.29177914017575307,"score_spread":0.27664501314443407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973285175","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996489,0.0015307133,0.000028579718,0.00025051454,0.000086256056,0.00007311346,0.000005211634,0.000001809748,0.0015348352],"genre_scores_gemma":[0.9980896,0.0000752332,0.0011341847,0.000036802863,0.000051010702,8.175987e-7,0.00000270224,0.000004859162,0.00060476636],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99893636,0.00006530301,0.0006804293,0.00008255371,0.00012611733,0.00010923398],"domain_scores_gemma":[0.9993697,0.00004072495,0.00030134412,0.00013447269,0.000104751045,0.00004901047],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002595867,0.000065758664,0.00042362764,0.000107837164,0.000014602162,0.0000011135481,0.00006495551,0.000059918762,0.000638341],"category_scores_gemma":[0.000059249134,0.000054090844,0.000113894435,0.00013110679,0.00014272814,0.00007832416,0.0000066604766,0.00014083403,0.0000015944237],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035444242,0.0005430797,0.5544994,0.00006749767,0.00002802018,0.000026476097,0.0006665534,0.0000148511635,0.43916905,0.00052391784,0.00048316835,0.00043357274],"study_design_scores_gemma":[0.0012023883,0.00036646286,0.987396,0.00018858176,0.000024729125,0.000034948982,0.00033650672,0.0000066949033,0.009154109,0.00038736616,0.00085690554,0.00004528324],"about_ca_topic_score_codex":0.00009180269,"about_ca_topic_score_gemma":0.0003320963,"teacher_disagreement_score":0.4328966,"about_ca_system_score_codex":0.00013147373,"about_ca_system_score_gemma":0.00014621705,"threshold_uncertainty_score":0.6989386},"labels":[],"label_agreement":null},{"id":"W1973564586","doi":"10.1007/s11908-006-0029-1","title":"Empiric antifungal therapy in neutropenic cancer patients","year":2006,"lang":"en","type":"article","venue":"Current Infectious Disease Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Health Sciences","funders":"","keywords":"Caspofungin; Amphotericin B; Voriconazole; Fluconazole; Itraconazole; Neutropenia; Amphotericin B deoxycholate; Medicine; Discontinuation; Aspergillosis; Empiric therapy; Internal medicine; Pharmacology; Antifungal; Chemotherapy; Biology; Immunology; Antibiotics; Microbiology; Dermatology","score_opus":0.0176789907982682,"score_gpt":0.3140801852295152,"score_spread":0.296401194431247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973564586","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98955595,0.00652911,0.0000067214705,0.00007429581,0.0011655039,0.0007724065,0.000015203165,0.00011208778,0.0017687293],"genre_scores_gemma":[0.997671,0.0012659503,0.000001391268,0.000108840795,0.00027404362,0.00010902733,0.0001032862,0.000027736245,0.00043868867],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99796206,0.000059141425,0.0005732773,0.0005347201,0.00046014265,0.00041063371],"domain_scores_gemma":[0.99881727,0.000029178142,0.00023419091,0.00044242348,0.00023441913,0.00024251326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018922507,0.00022881219,0.0003526674,0.00015502765,0.0000824415,0.000032143656,0.00003976375,0.00006546661,0.00034792136],"category_scores_gemma":[0.0001263138,0.00019254751,0.00021972231,0.0003922792,0.00005101282,0.00013324585,0.000029176106,0.00026610834,0.00002670944],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019786964,0.0023195785,0.9841142,0.00013440779,0.000020253183,0.00032591188,0.000011815182,0.000020122046,0.00018000675,0.000009571802,0.0047707227,0.007895536],"study_design_scores_gemma":[0.0011888776,0.0000975094,0.9864084,0.00017067205,0.0000588474,0.000009076488,0.0000019687864,0.000013755537,0.00013836822,0.00024605874,0.011469881,0.00019659524],"about_ca_topic_score_codex":0.00039830117,"about_ca_topic_score_gemma":0.00025543742,"teacher_disagreement_score":0.008115093,"about_ca_system_score_codex":0.00047554713,"about_ca_system_score_gemma":0.00043562197,"threshold_uncertainty_score":0.78518593},"labels":[],"label_agreement":null},{"id":"W1973791977","doi":"10.1111/myc.12104","title":"Efficacy of micafungin in invasive candidiasis caused by common <i>Candida</i> species with special emphasis on non‐<i>albicans Candida</i> species","year":2013,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Astellas Pharma","keywords":"Micafungin; Caspofungin; Candida krusei; Candida albicans; Amphotericin B; Candida glabrata; Candida parapsilosis; Echinocandin; Candida tropicalis; Corpus albicans; Microbiology; Internal medicine; Medicine; Biology; Antifungal; Fluconazole","score_opus":0.011615154690725417,"score_gpt":0.2372271964909527,"score_spread":0.2256120418002273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973791977","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9759125,0.00029145007,0.000009637753,0.0009132673,0.00012432822,0.0012214169,0.00021627256,0.000044937322,0.021266203],"genre_scores_gemma":[0.99433136,0.0004604555,0.00007671129,0.00076809985,0.00040188443,0.00006853054,0.00011926695,0.000051907235,0.0037217906],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99731004,0.00009945734,0.00065580197,0.0006026832,0.0006928685,0.0006391735],"domain_scores_gemma":[0.9979357,0.00067540165,0.00022693691,0.00070684997,0.00017559284,0.00027951488],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017460702,0.00044152915,0.0010864545,0.00025529964,0.00011753827,0.00006338712,0.00025331002,0.0001671061,0.0015211753],"category_scores_gemma":[0.0002654655,0.0003372355,0.00019149788,0.000630104,0.00050376874,0.0002045659,0.000056469184,0.00036978215,0.00011268213],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002128701,0.0011887954,0.8061635,0.00021537607,0.00016751038,0.00012277764,0.0017910568,0.000011223305,0.10372875,0.000086771084,0.08307286,0.0013226648],"study_design_scores_gemma":[0.0040477407,0.0010808293,0.82046366,0.00050924404,0.00011552337,0.0000068376653,0.0020162505,0.000004691281,0.16321957,0.000024689842,0.008151896,0.00035908303],"about_ca_topic_score_codex":0.0056298845,"about_ca_topic_score_gemma":0.023563595,"teacher_disagreement_score":0.07492097,"about_ca_system_score_codex":0.0003456731,"about_ca_system_score_gemma":0.00035061032,"threshold_uncertainty_score":0.999908},"labels":[],"label_agreement":null},{"id":"W1974016811","doi":"10.1038/sj.gene.6364130","title":"Genetic analysis of innate immunity in resistance to Candida albicans","year":2004,"lang":"en","type":"review","venue":"Genes and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; McGill University","funders":"National Research Council Canada; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; McGill University; Genomic Health","keywords":"Biology; Innate immune system; Candida albicans; Immunity; Corpus albicans; Immunology; Immune system; Acquired immune system; Complement system; Genetics; Microbiology","score_opus":0.03462601562799604,"score_gpt":0.3358696430889055,"score_spread":0.30124362746090944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974016811","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09174322,0.9068523,0.000043528296,0.00002228429,0.00004052887,0.00062380824,0.00016144014,0.000012117084,0.00050075346],"genre_scores_gemma":[0.04313518,0.9555872,0.0003769146,0.000040905907,0.00001869308,0.00003431486,0.00013436019,0.00002614995,0.0006462625],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9977222,0.00031799573,0.0009527285,0.00040791585,0.0002525181,0.00034663803],"domain_scores_gemma":[0.99809885,0.00014114665,0.0002726491,0.001176243,0.00013376509,0.00017732446],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00057863555,0.00037521956,0.0027885083,0.00071202626,0.000109563036,0.000016559496,0.0002691299,0.00027053946,0.00011067378],"category_scores_gemma":[0.00017443138,0.00030615513,0.0005569088,0.002419999,0.0001812933,0.00003414571,0.00017210288,0.0005397514,0.0000051016423],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035786344,0.00051226694,0.02671518,0.044143554,0.0029192702,0.00007161518,0.0010296776,0.000021072748,0.00010949833,0.00011808843,0.0000437549,0.9239582],"study_design_scores_gemma":[0.0007641872,0.0002840377,0.5163476,0.018765239,0.01056668,0.000010519363,0.0004219676,0.000007214475,0.000024414954,0.000072069815,0.45202592,0.00071014976],"about_ca_topic_score_codex":0.005614065,"about_ca_topic_score_gemma":0.011993194,"teacher_disagreement_score":0.923248,"about_ca_system_score_codex":0.00026473487,"about_ca_system_score_gemma":0.0006344718,"threshold_uncertainty_score":0.9999391},"labels":[],"label_agreement":null},{"id":"W1974157104","doi":"10.1097/00007691-200106000-00015","title":"Quantitation of Free and Total Amphotericin B in Human Biologic Matrices by a Liquid Chromatography Tandem Mass Spectrometric Method","year":2001,"lang":"en","type":"article","venue":"Therapeutic Drug Monitoring","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Amphotericin B; Chromatography; Chemistry; Detection limit; Quantitative analysis (chemistry); Microbiology; Biology","score_opus":0.02728749814547204,"score_gpt":0.33153075792023856,"score_spread":0.3042432597747665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974157104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98819274,0.009253535,0.0017177862,0.00008318133,0.00009077531,0.00024638665,0.000003680737,0.000046770263,0.00036515112],"genre_scores_gemma":[0.9956636,0.0014208374,0.0027091035,0.000016176662,0.00007583482,0.000009593921,0.000004450246,0.000015746276,0.00008465349],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99872774,0.00011676812,0.000367869,0.000289469,0.00023399667,0.00026418344],"domain_scores_gemma":[0.9993026,0.0001806044,0.00013377293,0.00027132125,0.000048259193,0.000063397696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006200557,0.0001614842,0.00041045187,0.00042062404,0.000061947816,0.000016063785,0.00010362862,0.00008236725,0.000021269474],"category_scores_gemma":[0.00004210207,0.00013615823,0.000081816324,0.0010871876,0.00007824567,0.00009774323,0.000027529832,0.00016267704,0.0000011680216],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017235785,0.00008284787,0.4816836,0.000060190367,0.000036493166,0.000007855003,0.00025908623,0.0000012874403,0.51574045,0.000048725135,0.000004065726,0.0019030434],"study_design_scores_gemma":[0.0013996689,0.00074323063,0.8818233,0.00018047445,0.00008390845,0.000016728076,0.0016223855,0.000077348544,0.11302319,0.00080380874,0.00004225825,0.00018368119],"about_ca_topic_score_codex":0.00027757813,"about_ca_topic_score_gemma":0.000011288789,"teacher_disagreement_score":0.40271723,"about_ca_system_score_codex":0.00006681137,"about_ca_system_score_gemma":0.0000189231,"threshold_uncertainty_score":0.5552371},"labels":[],"label_agreement":null},{"id":"W1976577798","doi":"10.1038/bjc.2012.147","title":"Mould-active compared with fluconazole prophylaxis to prevent invasive fungal diseases in cancer patients receiving chemotherapy or haematopoietic stem-cell transplantation: a systematic review and meta-analysis of randomised controlled trials","year":2012,"lang":"en","type":"review","venue":"British Journal of Cancer","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Population Health Research Institute; McMaster University; Institute for Clinical Evaluative Sciences; SickKids Foundation; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Fluconazole; Meta-analysis; Medicine; Transplantation; Chemotherapy; Haematopoiesis; Hematopoietic stem cell transplantation; Stem cell; Randomized controlled trial; Oncology; Cancer; Internal medicine; Surgery; Antifungal; Biology; Dermatology","score_opus":0.07631400875532027,"score_gpt":0.36905139411310184,"score_spread":0.2927373853577816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976577798","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0054247794,0.980061,0.000021602718,0.00004640723,0.000046233163,0.013372752,0.0010112487,0.0000041111257,0.000011875891],"genre_scores_gemma":[0.031758808,0.9654212,0.00003941301,0.00018575968,0.00004271635,0.002217665,0.0000306331,0.00004237871,0.0002614152],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9921051,0.0021986684,0.0041611325,0.0003750977,0.0008773941,0.00028258088],"domain_scores_gemma":[0.9917376,0.0018182945,0.004876718,0.00025712384,0.0009950012,0.0003152558],"candidate_categories":["metaepi_narrow","metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.0023663607,0.00049750175,0.025477283,0.00038374777,0.000046752044,0.000044543023,0.00018932264,0.00014430056,0.00070106704],"category_scores_gemma":[0.0006279754,0.00028070842,0.0032951003,0.0008442634,0.00007772418,0.00017099404,0.000013051975,0.00036919478,4.6751072e-7],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013537349,0.0008499823,0.0003090763,0.8207814,0.1476188,0.00017436717,0.0003903944,0.0000074394225,0.0000014639485,1.4744047e-7,0.00003500324,0.01629454],"study_design_scores_gemma":[0.019948842,0.00036123238,0.0009761736,0.21757148,0.760581,0.00010004573,0.00007496945,5.838853e-7,0.000013739138,3.938809e-7,0.00012237244,0.00024916203],"about_ca_topic_score_codex":0.0001672812,"about_ca_topic_score_gemma":0.0021080747,"teacher_disagreement_score":0.6129622,"about_ca_system_score_codex":0.00035443166,"about_ca_system_score_gemma":0.0012981393,"threshold_uncertainty_score":0.99996454},"labels":[],"label_agreement":null},{"id":"W1976672229","doi":"10.1016/j.jaci.2014.12.1930","title":"Inherited CARD9 deficiency in otherwise healthy children and adults with Candida species–induced meningoencephalitis, colitis, or both","year":2015,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":219,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"National Center for Research Resources; National Institutes of Health; Astellas Pharma; Institut National de la Santé et de la Recherche Médicale; National Center for Advancing Translational Sciences; Agence Nationale de la Recherche; Cliniques Universitaires Saint-Luc; Regeneron Pharmaceuticals; ViiV Healthcare; Université Paris Descartes; Biogen; St. Giles Foundation; GlaxoSmithKline; Pfizer; Université de Montpellier; Gilead Sciences; Sanofi","keywords":"Meningoencephalitis; Candida albicans; Colitis; Biology; Candida glabrata; Immunology; Gastrointestinal tract; Medicine; Microbiology; Internal medicine","score_opus":0.04094366111904613,"score_gpt":0.3335405676423736,"score_spread":0.2925969065233275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976672229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99336857,0.0047652414,0.000018051764,0.0011505208,0.00013852706,0.00017201704,0.000005744995,0.0000073443107,0.00037396388],"genre_scores_gemma":[0.99144715,0.0073833573,0.0003032811,0.0005076568,0.00012180254,0.0000015794974,0.0000040306254,0.000011754991,0.00021938697],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981321,0.00024867838,0.0008661481,0.00025293944,0.00020626538,0.00029388725],"domain_scores_gemma":[0.99878913,0.00020943003,0.00033349736,0.00017251131,0.00020601739,0.0002893873],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084379775,0.000147072,0.00070043834,0.000092295704,0.00005081121,0.000014210071,0.00009484513,0.00021994581,0.00005886425],"category_scores_gemma":[0.00049730804,0.00009457341,0.00006521438,0.00016091617,0.00043756783,0.000102396494,0.000040817966,0.00061493565,0.0000013279537],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0624699,0.00092766766,0.92193276,0.00003297502,0.00062638737,0.00065865816,0.0013279851,9.3830386e-7,0.00016594441,0.0003525917,0.0006204713,0.0108837485],"study_design_scores_gemma":[0.009614798,0.010006941,0.9762502,0.00024293574,0.00004257413,0.00096492236,0.0017084406,0.000006382818,0.000012850305,0.00006974518,0.00097275036,0.00010746895],"about_ca_topic_score_codex":0.0006928228,"about_ca_topic_score_gemma":0.006598378,"teacher_disagreement_score":0.05431746,"about_ca_system_score_codex":0.00007489421,"about_ca_system_score_gemma":0.00064966956,"threshold_uncertainty_score":0.38565916},"labels":[],"label_agreement":null},{"id":"W1976895119","doi":"10.1097/00043426-200407000-00004","title":"Amphotericin B Nephrotoxicity in Children","year":2004,"lang":"en","type":"review","venue":"Journal of Pediatric Hematology/Oncology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Pediatric Oncology Group","funders":"","keywords":"Nephrotoxicity; Medicine; Amphotericin B deoxycholate; Amphotericin B; Renal function; Pharmacology; Urology; Toxicity; Glycosuria; Internal medicine; Gastroenterology; Endocrinology; Diabetes mellitus; Caspofungin","score_opus":0.03959691380358985,"score_gpt":0.38801915119078245,"score_spread":0.3484222373871926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976895119","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012185517,0.9852598,0.000085431464,0.0001799056,0.00050297985,0.0011883109,0.000015249646,0.00002066284,0.00056217157],"genre_scores_gemma":[0.003071144,0.99368066,0.0014669894,0.0001926491,0.001412524,0.000024240422,0.000019986714,0.00005844815,0.000073345036],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99448144,0.0006519022,0.0032223815,0.00049899874,0.00046087836,0.00068441563],"domain_scores_gemma":[0.99545574,0.00062391086,0.0027549812,0.00048526085,0.00027672623,0.00040338378],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0017678576,0.00058558956,0.0067146565,0.0012918054,0.00005358645,0.000011813667,0.00048349623,0.001819668,0.00020200203],"category_scores_gemma":[0.0009804306,0.00042497402,0.0013730425,0.0010821123,0.00022011035,0.00011651462,0.000119323704,0.0027558536,0.00012327403],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010355924,0.0054425616,0.17907278,0.051363114,0.0015623063,0.016459528,0.0003969364,0.0000028614024,0.0000055563255,0.0004490577,0.010193544,0.7340162],"study_design_scores_gemma":[0.006875732,0.0045444244,0.011473037,0.008291456,0.008144669,0.06381646,0.00010799196,8.2225813e-7,0.000005662135,0.0004989261,0.8953406,0.00090020796],"about_ca_topic_score_codex":0.000030939456,"about_ca_topic_score_gemma":0.00002972739,"teacher_disagreement_score":0.8851471,"about_ca_system_score_codex":0.0020801662,"about_ca_system_score_gemma":0.008892927,"threshold_uncertainty_score":0.99982023},"labels":[],"label_agreement":null},{"id":"W197690493","doi":"10.1155/2014/340586","title":"Therapeutic drug monitoring for triazoles: A needs assessment review and recommendations from a Canadian perspective","year":2014,"lang":"en","type":"review","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; Princess Margaret Cancer Centre; Vancouver General Hospital; University of Ottawa; University of British Columbia; Toronto General Hospital; McMaster University; Centre Hospitalier Universitaire Sainte-Justine; Hamilton Health Sciences; University of Toronto; University Health Network; Ottawa Hospital; University of Manitoba; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Perspective (graphical); Therapeutic drug monitoring; Drug; Medicine; Medical physics; Pharmacology; Computer science; Artificial intelligence","score_opus":0.020802032924014578,"score_gpt":0.35361008765410146,"score_spread":0.3328080547300869,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W197690493","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029113784,0.9932108,0.00008820484,0.0042250897,0.00057246257,0.00081633386,0.00069531397,0.000005508404,0.00009515522],"genre_scores_gemma":[0.0101161115,0.98718625,0.00004268204,0.0018224218,0.00056695344,0.00003845789,0.00014033784,0.000027035641,0.00005974011],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99830365,0.00027157887,0.0007078764,0.0002635629,0.00006484649,0.00038848762],"domain_scores_gemma":[0.99614143,0.00058073556,0.00035841574,0.00017353354,0.00034010655,0.0024057701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000530684,0.0002889651,0.0019669903,0.00044391083,0.00021563427,0.000032458087,0.000121784135,0.00030050497,0.0002908232],"category_scores_gemma":[0.0010347889,0.00021039255,0.00044425073,0.00016637002,0.0002869831,0.00003769611,0.000012591906,0.0006223509,0.000001920663],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029448142,0.00008544596,0.013644704,0.018054217,0.0020931002,0.00013751286,0.00026625572,1.8307196e-8,0.0000019045536,0.0006909947,0.01453895,0.95045745],"study_design_scores_gemma":[0.00085044105,0.0003003818,0.001058077,0.027323335,0.0055857874,0.00068274676,0.0003884963,4.662964e-7,6.0354544e-8,0.00025948524,0.9633421,0.00020862553],"about_ca_topic_score_codex":0.05553719,"about_ca_topic_score_gemma":0.19143434,"teacher_disagreement_score":0.95024884,"about_ca_system_score_codex":0.0009641158,"about_ca_system_score_gemma":0.012010912,"threshold_uncertainty_score":0.99359006},"labels":[],"label_agreement":null},{"id":"W1977061544","doi":"10.1016/j.mib.2004.06.001","title":"Animal models in the analysis of Candida host–pathogen interactions","year":2004,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":69,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Virulence; Fungal pathogen; DNA microarray; Pathogen; Host (biology); Immune system; Gene; Computational biology; Transgene; Systemic candidiasis; Mutant; Gene knockout; Genetics; Microbiology; Corpus albicans; Gene expression","score_opus":0.12981700513949013,"score_gpt":0.4352803778724044,"score_spread":0.3054633727329143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977061544","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023022718,0.9954393,0.000056061144,0.000043186046,0.00080459495,0.00073626,0.0005437388,0.0000068186723,0.00006776866],"genre_scores_gemma":[0.008861117,0.9885824,0.00003134039,0.00001075097,0.000085102714,0.00006667235,0.0023370648,0.00001237512,0.000013224087],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979462,0.00030113186,0.0009633623,0.00045300086,0.00006784111,0.00026846965],"domain_scores_gemma":[0.99885494,0.00023875554,0.0003231504,0.00048449752,0.00006389856,0.000034779077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004877937,0.00026990505,0.0018752622,0.00083537796,0.000026075546,0.000005806135,0.0002601651,0.0002375102,0.00008046669],"category_scores_gemma":[0.00007912696,0.00017380291,0.0007132524,0.0014126967,0.00016083877,0.000038259746,0.00006139561,0.0007738323,0.000011684783],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009894366,0.0071679032,0.033650573,0.18235594,0.005510988,0.000055317145,0.006268651,0.00022488662,0.0023173755,0.006351599,0.004113828,0.7509935],"study_design_scores_gemma":[0.0007012003,0.00018536579,0.0048967735,0.02748222,0.002667213,0.00006962904,0.0002504269,0.000045762838,0.0000017719691,0.00006402386,0.9632809,0.00035469767],"about_ca_topic_score_codex":0.00011463438,"about_ca_topic_score_gemma":0.0003249956,"teacher_disagreement_score":0.95916706,"about_ca_system_score_codex":0.00031919277,"about_ca_system_score_gemma":0.0004961958,"threshold_uncertainty_score":0.7087477},"labels":[],"label_agreement":null},{"id":"W1977881225","doi":"10.1128/aac.00299-06","title":"Antifungal Prophylaxis Is Effective against Murine Invasive Pulmonary Aspergillosis","year":2006,"lang":"en","type":"letter","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Antifungal; Aspergillosis; Medicine; Echinocandins; Pulmonary aspergillosis; Intensive care medicine; Mycosis; Voriconazole; Immunology; Caspofungin; Dermatology","score_opus":0.009415981921199948,"score_gpt":0.24036033173203922,"score_spread":0.23094434981083928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977881225","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.81240565,0.0002313673,0.00001162788,0.18059917,0.000317598,0.0018154617,0.00037007616,0.000109538945,0.0041395077],"genre_scores_gemma":[0.37229818,0.0022153044,0.0001306502,0.6108021,0.0017997223,0.000030653333,0.0009404336,0.00014469969,0.011638232],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99673516,0.00010491949,0.00059012166,0.001301378,0.0005038199,0.00076458714],"domain_scores_gemma":[0.99853086,0.000100603065,0.00028187787,0.00071047206,0.00023686475,0.0001393458],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015144845,0.0008432055,0.0012543992,0.0002209602,0.00026324549,0.000103458224,0.00022936372,0.001242611,0.0006122771],"category_scores_gemma":[0.000023402263,0.00070141413,0.00056713604,0.0002851656,0.00041224813,0.00012749442,0.00009450386,0.0016029666,0.000103609935],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031194047,0.00035352755,0.094235376,0.0014109374,0.00043992588,0.0013623373,0.0001178474,1.4551601e-7,0.01350578,6.103767e-7,0.8793388,0.008922745],"study_design_scores_gemma":[0.0026062364,0.00064872357,0.27055264,0.0011820184,0.00029785905,0.00010849682,0.000021561018,0.000013277003,0.02937544,0.000044166485,0.6940457,0.0011038758],"about_ca_topic_score_codex":0.00021818627,"about_ca_topic_score_gemma":0.000015106637,"teacher_disagreement_score":0.44010746,"about_ca_system_score_codex":0.00016489008,"about_ca_system_score_gemma":0.00016484149,"threshold_uncertainty_score":0.9995437},"labels":[],"label_agreement":null},{"id":"W1978257350","doi":"10.1128/ec.00292-13","title":"Modeling the Transcriptional Regulatory Network That Controls the Early Hypoxic Response in Candida albicans","year":2014,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Concordia University; Université Laval; National Research Council Canada; Centre hospitalier de l'Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Regulation of gene expression; Cell biology; Transcriptional regulation; Computational biology; Transcription factor; Microbiology; Genetics; Gene","score_opus":0.018030550839709766,"score_gpt":0.23155114348231,"score_spread":0.21352059264260026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978257350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892367,0.0012403314,0.003248808,0.0029261336,0.00019167237,0.00049692806,0.000003859718,0.000030020607,0.0026255145],"genre_scores_gemma":[0.99468493,0.000035076704,0.0000767107,0.0017550908,0.00028913718,0.000022070712,0.0000049122405,0.000021420368,0.0031106458],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99808747,0.00047797948,0.00030720365,0.00029329152,0.00042459002,0.0004094905],"domain_scores_gemma":[0.99849856,0.0006820964,0.00004896424,0.00062070496,0.000047707323,0.0001019806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00224877,0.00016708713,0.000287869,0.00003449573,0.00020731795,0.000029590858,0.00020665725,0.000090819565,0.00016661905],"category_scores_gemma":[0.00013890749,0.000093880815,0.00016239262,0.00017363037,0.00018990942,0.00005814796,0.00002078337,0.0004133262,0.000039711816],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013095278,0.00029987836,0.9360448,0.000093421244,0.00007864924,0.00004818491,0.0028638763,0.034958947,0.0071077133,0.0022835608,0.0018202639,0.0013054068],"study_design_scores_gemma":[0.0013718094,0.00017034626,0.9487249,0.000071999304,0.000063558684,0.0000064692927,0.00028965867,0.047700286,0.00005866354,0.00075896765,0.0006721415,0.000111198184],"about_ca_topic_score_codex":0.0002414169,"about_ca_topic_score_gemma":0.00051404204,"teacher_disagreement_score":0.012741338,"about_ca_system_score_codex":0.00009748855,"about_ca_system_score_gemma":0.00017761863,"threshold_uncertainty_score":0.38283485},"labels":[],"label_agreement":null},{"id":"W1978403364","doi":"10.1067/moe.2003.44","title":"Reassessing the presence of Candida albicans in denture-related stomatitis","year":2003,"lang":"en","type":"article","venue":"Oral Surgery Oral Medicine Oral Pathology Oral Radiology and Endodontology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":287,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université Laval; University of Toronto","funders":"","keywords":"Stomatitis; Dentures; Candida albicans; Medicine; Dentistry; Yeast; Corpus albicans; Dermatology; Microbiology; Biology; Genetics","score_opus":0.031489799028251046,"score_gpt":0.30437847308054067,"score_spread":0.2728886740522896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978403364","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9824261,0.008482779,0.00016178456,0.005480498,0.0010432458,0.00051409024,0.000012130869,0.00006279112,0.0018165507],"genre_scores_gemma":[0.9960652,0.0012827553,0.0006285641,0.0013474099,0.00005685719,0.00004117252,0.00005411319,0.000031370862,0.00049255835],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9945774,0.0020171572,0.0012956305,0.00082776416,0.00026850728,0.0010135125],"domain_scores_gemma":[0.9965685,0.0019416051,0.0004186228,0.00062742055,0.00016555496,0.00027827086],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0034058467,0.00047585787,0.002336538,0.00038657116,0.0002116373,0.000006985233,0.00021832221,0.0007409505,0.00075759564],"category_scores_gemma":[0.004247573,0.0003093272,0.00023979928,0.00068636925,0.004352907,0.00017530653,0.00006794034,0.0010067758,0.000010211512],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008178688,0.00015748265,0.9705067,0.00010237312,0.00013113112,0.0019393378,0.0004818828,0.000005342392,0.0036373865,0.004531136,0.0031216696,0.014567678],"study_design_scores_gemma":[0.0028805344,0.0010155609,0.9796659,0.00026428726,0.0003078511,0.0069115954,0.0009072198,0.00008862945,0.0002441774,0.0037020715,0.0036678433,0.00034436662],"about_ca_topic_score_codex":0.0020465006,"about_ca_topic_score_gemma":0.007113996,"teacher_disagreement_score":0.014223311,"about_ca_system_score_codex":0.00009639941,"about_ca_system_score_gemma":0.0003136523,"threshold_uncertainty_score":0.99993587},"labels":[],"label_agreement":null},{"id":"W197894849","doi":"10.1155/2008/161835","title":"Economic Evaluation of Voriconazole for the Treatment of Candidemia in Canadian Adults","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institute of Health Economics; University of Manitoba; University Health Network; Pfizer (Canada); Université de Montréal; Hôpital Maisonneuve-Rosemont; CancerCare Manitoba; McMaster University","funders":"","keywords":"Voriconazole; Medicine; Intensive care medicine; Antifungal; Dermatology","score_opus":0.013441986918642753,"score_gpt":0.27738169111051153,"score_spread":0.2639397041918688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W197894849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899097,0.008780927,0.000006273124,0.00058468146,0.00022126881,0.0002783288,0.00015643053,6.219994e-7,0.000061770654],"genre_scores_gemma":[0.998053,0.0016663672,0.0000035379915,0.00014720959,0.00009432213,0.000006624122,0.000013815701,0.000003997648,0.000011128305],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992638,0.000054749897,0.00034827492,0.00008395947,0.000049306072,0.00019988148],"domain_scores_gemma":[0.99873525,0.00018228576,0.00012726606,0.00008099906,0.00020180168,0.00067241973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033344416,0.000069202,0.0003139264,0.00016236771,0.00006008096,0.0000012784847,0.000044111748,0.00009592704,0.00020867721],"category_scores_gemma":[0.0005168078,0.000044691897,0.00011030127,0.000046850073,0.00031578675,0.000017028631,0.0000014837102,0.00006438855,4.5809594e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015238118,0.00005441023,0.98817664,0.000031506886,0.00008324988,0.000028987466,0.00028156422,0.000016722446,0.00010034679,0.000042427226,0.00052878226,0.010502956],"study_design_scores_gemma":[0.0039700624,0.0012616554,0.9875897,0.00011435367,0.00023848112,0.00039890807,0.00019190587,0.00024861004,0.00010036858,0.0000787752,0.0057549574,0.000052214607],"about_ca_topic_score_codex":0.55317473,"about_ca_topic_score_gemma":0.96731544,"teacher_disagreement_score":0.41414073,"about_ca_system_score_codex":0.00068781414,"about_ca_system_score_gemma":0.010315774,"threshold_uncertainty_score":0.9952948},"labels":[],"label_agreement":null},{"id":"W1979010337","doi":"10.1139/w01-066","title":"Sterol composition of itraconazole-resistant and itraconazole-susceptible isolates of <i>Aspergillus fumigatus</i>","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Itraconazole; Sterol; Ergosterol; Aspergillus fumigatus; Microbiology; Aspergillus; Biology; Antifungal; Chemistry; Biochemistry; Cholesterol","score_opus":0.01126244176638159,"score_gpt":0.2315514161853004,"score_spread":0.22028897441891881,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979010337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934877,0.0046980735,0.00008646472,0.00071116234,0.00016551926,0.00013764526,0.000117383766,0.0000029398213,0.0005931163],"genre_scores_gemma":[0.9987144,0.0003040601,0.0003756884,0.00037153336,0.00006650943,4.663279e-7,0.000023585972,0.00001268312,0.00013111014],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986667,0.000079415084,0.0007280995,0.00015704801,0.000055840745,0.0003129016],"domain_scores_gemma":[0.9985348,0.000084148254,0.00039703198,0.00017563201,0.00043238912,0.00037601456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032576057,0.00015135204,0.0006335165,0.00025765185,0.00006145486,0.0000065773224,0.0001217724,0.00018131339,0.00027642163],"category_scores_gemma":[0.000052960033,0.00012926354,0.00016011643,0.00014071394,0.0005182436,0.00007952733,0.000011253945,0.00027553656,0.0000030257895],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007893833,0.00005448351,0.1033394,0.000105332445,0.000113847345,0.0001235196,0.00024837864,0.000004853046,0.89360726,0.00010834322,0.0007414856,0.000763745],"study_design_scores_gemma":[0.009505608,0.007775064,0.38437226,0.0017756936,0.0008099746,0.008155767,0.0026844128,0.000039116556,0.54356724,0.00043533128,0.040209163,0.000670376],"about_ca_topic_score_codex":0.0011410272,"about_ca_topic_score_gemma":0.010058169,"teacher_disagreement_score":0.35004,"about_ca_system_score_codex":0.000092248694,"about_ca_system_score_gemma":0.000703979,"threshold_uncertainty_score":0.56126946},"labels":[],"label_agreement":null},{"id":"W1979252046","doi":"10.1007/s00018-015-1860-z","title":"Opportunistic yeast pathogens: reservoirs, virulence mechanisms, and therapeutic strategies","year":2015,"lang":"en","type":"review","venue":"Cellular and Molecular Life Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":86,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Wellcome Trust","keywords":"Biology; Immunosuppression; Virulence; Drug resistance; Antifungal drug; Antifungal; Immunology; Microbiology; Genetics; Gene","score_opus":0.09691113759405097,"score_gpt":0.34824992160272744,"score_spread":0.2513387840086765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979252046","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00047896872,0.9939688,0.002939731,0.00006360294,0.00010891009,0.0005927731,0.000045129316,0.000036393787,0.0017656861],"genre_scores_gemma":[0.009503546,0.9889906,0.0008756148,0.000217906,0.000051289655,0.000022901448,0.000045539116,0.000027954049,0.00026465137],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975069,0.00022201322,0.00042983412,0.00082510716,0.000626466,0.00038965855],"domain_scores_gemma":[0.9987375,0.000051443763,0.00018019852,0.0004300873,0.00011212148,0.0004886446],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012872603,0.0003952998,0.001171853,0.00014856285,0.00023157774,0.00014474786,0.0002503361,0.0002468111,0.000028475091],"category_scores_gemma":[0.00017366535,0.00027643295,0.00019023282,0.00033884542,0.000976827,0.000092266084,0.00014351231,0.00028750452,0.00001390024],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006368638,0.00021488666,0.00006503013,0.031470124,0.00037438463,0.0016353348,0.00034287505,0.0000013877285,0.008013744,0.054567352,0.0003979232,0.90285325],"study_design_scores_gemma":[0.0004999878,0.0010166413,0.00003699444,0.008500988,0.0026146178,0.00026531605,0.0023447224,0.00015282196,0.00012419529,0.009442647,0.9739047,0.0010963635],"about_ca_topic_score_codex":0.000016281028,"about_ca_topic_score_gemma":0.0000045243896,"teacher_disagreement_score":0.9735068,"about_ca_system_score_codex":0.000029641973,"about_ca_system_score_gemma":0.0018410601,"threshold_uncertainty_score":0.99996877},"labels":[],"label_agreement":null},{"id":"W1979793180","doi":"10.1002/jps.20080","title":"Assessing the antifungal activity and toxicity profile of amphotericin B lipid complex (ABLC; Abelcet®) in combination with caspofungin in experimental systemic aspergillosis","year":2004,"lang":"en","type":"article","venue":"Journal of Pharmaceutical Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Caspofungin; Aspergillus fumigatus; Amphotericin B; Aspergillosis; Toxicity; Pharmacology; Creatinine; Regimen; Medicine; Biology; Internal medicine; Microbiology; Immunology; Antifungal","score_opus":0.07255513374228377,"score_gpt":0.40371397535368325,"score_spread":0.33115884161139947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979793180","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99791163,0.0004346892,0.00017900726,0.0008691473,0.00006115399,0.00025067502,0.0000015790192,0.000003418057,0.0002886769],"genre_scores_gemma":[0.9992105,0.00006313064,0.00059718016,0.00009032308,0.000029314631,0.0000018969514,2.3852206e-7,0.0000038173416,0.0000035923829],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99847686,0.00015923109,0.00040434024,0.00017069578,0.000570044,0.0002188393],"domain_scores_gemma":[0.99934864,0.00016723189,0.00022863064,0.000071261726,0.00008602144,0.00009823944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016600167,0.000106607,0.00035885125,0.0001370488,0.00009493478,0.000046981,0.00012480747,0.00004238354,0.000037386148],"category_scores_gemma":[0.000108536144,0.00005959243,0.000047714882,0.0005425994,0.0006172306,0.0004775624,0.000032434098,0.0002971277,3.8253972e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030936094,0.000500051,0.33299795,0.00007384477,0.000008480756,0.00003559702,0.00033262218,0.000063070984,0.66462517,0.00008102244,0.0000027916637,0.000970012],"study_design_scores_gemma":[0.0020222904,0.00066808256,0.6508478,0.0004778252,0.00002203054,0.00019700726,0.0018388468,0.0016534335,0.34218156,0.00002407038,0.0000036905474,0.00006335962],"about_ca_topic_score_codex":0.00010719908,"about_ca_topic_score_gemma":0.000056721863,"teacher_disagreement_score":0.32244363,"about_ca_system_score_codex":0.00022589348,"about_ca_system_score_gemma":0.00024274827,"threshold_uncertainty_score":0.24301086},"labels":[],"label_agreement":null},{"id":"W1980063725","doi":"10.1016/j.addr.2007.08.042","title":"Enhancing drug absorption using lipids: A case study presenting the development and pharmacological evaluation of a novel lipid-based oral amphotericin B formulation for the treatment of systemic fungal infections","year":2007,"lang":"en","type":"review","venue":"Advanced Drug Delivery Reviews","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"British Columbia Institute of Technology; University of British Columbia","funders":"","keywords":"Bioavailability; Drug; Pharmacology; Amphotericin B; Oral administration; Pharmacokinetics; Toxicity; Absorption (acoustics); Medicine; Antifungal drug; Drug delivery; Chemistry; Antifungal; Internal medicine; Dermatology","score_opus":0.23469844852882904,"score_gpt":0.45607530951941777,"score_spread":0.22137686099058873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980063725","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3933871,0.58927286,0.005916311,0.0000023277446,0.0001461376,0.011248696,0.000013071521,0.000011383671,0.0000021138635],"genre_scores_gemma":[0.22197573,0.7734053,0.003167863,0.000011808885,0.00013774485,0.0012086259,0.000040884348,0.000029574558,0.00002248256],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99611807,0.0006472311,0.0019874696,0.00048866577,0.00047253963,0.0002860213],"domain_scores_gemma":[0.99588436,0.0014965065,0.0015175099,0.00043720967,0.00059689995,0.00006749859],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005173179,0.00043223673,0.0018398056,0.00016037951,0.00035555576,0.00001696424,0.00009373705,0.00010092463,0.000007820449],"category_scores_gemma":[0.0003192917,0.00022257167,0.00054664415,0.0004601859,0.00006614145,0.00012710683,0.000033988345,0.00017972456,8.625498e-7],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015930751,0.0012885537,0.00059412135,0.013010566,0.00036453403,0.000006210824,0.002104835,0.00036648117,0.0007201027,0.0000011480955,0.0000037077546,0.9813804],"study_design_scores_gemma":[0.036127225,0.005116392,0.0012837724,0.1485096,0.13842383,0.002304098,0.02572744,0.12368201,0.0035533202,0.000008847397,0.5122279,0.0030355603],"about_ca_topic_score_codex":0.00015509695,"about_ca_topic_score_gemma":0.0011045787,"teacher_disagreement_score":0.97834486,"about_ca_system_score_codex":0.00088826346,"about_ca_system_score_gemma":0.00064539065,"threshold_uncertainty_score":0.90762097},"labels":[],"label_agreement":null},{"id":"W1980207927","doi":"10.1139/w08-048","title":"Candida albicans-secreted lipase induces injury and steatosis in immune and parenchymal cells","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Candida albicans; Lipase; Immune system; Microbiology; Biology; Corpus albicans; Virulence; Effector; Extracellular; Lipid droplet; Cytotoxicity; Cytoplasm; Yeast; Enzyme; Biochemistry; Immunology; In vitro; Gene","score_opus":0.013828948889748241,"score_gpt":0.2280164951431684,"score_spread":0.21418754625342018,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980207927","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995275,0.0038859926,0.0000020369957,0.00049734575,0.0001101516,0.00009041218,0.000049839018,0.0000017137073,0.00008746708],"genre_scores_gemma":[0.9987563,0.0006306707,0.000095433636,0.00033802204,0.000049471182,6.6579616e-7,0.0000068008885,0.00000737743,0.000115292],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990978,0.00008175764,0.00036196446,0.00014654052,0.000029192532,0.00028269945],"domain_scores_gemma":[0.99919134,0.000054627868,0.00012755366,0.000104496976,0.000090264606,0.00043169982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023824956,0.00011119669,0.00042314446,0.00026882853,0.000078116704,0.0000068652075,0.000063804226,0.0001213952,0.000094091876],"category_scores_gemma":[0.000096075586,0.00009292222,0.0000454646,0.00012947856,0.000558569,0.0000487048,0.000010482599,0.00032585723,0.0000019502334],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002048952,0.000013469695,0.5936058,0.000022302622,0.000037298363,0.0006429809,0.000728923,1.8645933e-7,0.40282822,0.000007469954,0.000680409,0.0012280475],"study_design_scores_gemma":[0.0013218384,0.0008317349,0.9692729,0.0001366528,0.000042334425,0.002317911,0.0007173232,0.0000013616146,0.020554116,0.000016685677,0.004637444,0.00014971294],"about_ca_topic_score_codex":0.012682219,"about_ca_topic_score_gemma":0.07308882,"teacher_disagreement_score":0.3822741,"about_ca_system_score_codex":0.00010107179,"about_ca_system_score_gemma":0.0010959194,"threshold_uncertainty_score":0.99389243},"labels":[],"label_agreement":null},{"id":"W1980318916","doi":"10.1046/j.1365-2141.2003.04583.x","title":"The use of stimulated granulocyte transfusions to prevent recurrence of past severe infections after allogeneic stem cell transplantation","year":2003,"lang":"en","type":"article","venue":"British Journal of Haematology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Hospital for Sick Children","keywords":"Medicine; Neutropenia; Granulocyte; Transplantation; Surgery; Aspergillosis; Incidence (geometry); Granulocyte colony-stimulating factor; Internal medicine; Autologous stem-cell transplantation; Stem cell; Hematopoietic stem cell transplantation; Chemotherapy; Toxicity; Gastroenterology; Immunology","score_opus":0.02211683054496075,"score_gpt":0.2634044771101646,"score_spread":0.24128764656520388,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980318916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930931,0.0018842191,0.004338366,0.00013578957,0.00015890396,0.00029294557,0.00004474578,0.00000412631,0.000047844944],"genre_scores_gemma":[0.995974,0.0033214006,0.00053316,0.0000474517,0.000010149327,0.0000055841615,0.0000021888945,0.000008709102,0.00009738124],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984808,0.00027688395,0.00074068096,0.00012076756,0.00021151193,0.00016938387],"domain_scores_gemma":[0.99878436,0.0002833708,0.00024414266,0.00014296446,0.00043357498,0.00011157652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033557566,0.00009046969,0.00044471934,0.00008138917,0.0000814693,0.000009264456,0.000071820854,0.00009086673,0.0000558824],"category_scores_gemma":[0.00009867632,0.000075506476,0.0001922823,0.00020829079,0.00012678641,0.00008567446,0.0000051081292,0.00022548287,0.0000015861187],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013733663,0.008919608,0.7647364,0.00556772,0.0013362269,0.029570749,0.00886874,0.0047837105,0.07228981,0.00067254505,0.005531953,0.08398885],"study_design_scores_gemma":[0.006033859,0.0037183042,0.7435294,0.0054066074,0.0015650165,0.17017747,0.0012848015,0.000053935284,0.061356362,0.00039189585,0.0059923776,0.0004900073],"about_ca_topic_score_codex":0.000041849173,"about_ca_topic_score_gemma":0.00069055526,"teacher_disagreement_score":0.14060672,"about_ca_system_score_codex":0.000023516795,"about_ca_system_score_gemma":0.00015769286,"threshold_uncertainty_score":0.30790648},"labels":[],"label_agreement":null},{"id":"W1980714401","doi":"10.1111/j.1399-302x.2007.00428.x","title":"Differential expression of Toll‐like receptors in chronic hyperplastic candidosis","year":2008,"lang":"en","type":"article","venue":"Oral Microbiology and Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Receptor; Toll; Immunology; Toll-like receptor; Differential (mechanical device); Microbiology; Immune system; Innate immune system; Genetics","score_opus":0.012407876845014798,"score_gpt":0.24162113471078095,"score_spread":0.22921325786576616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980714401","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961309,0.0031783076,0.00003490908,0.000080669975,0.00033748552,0.0001315649,0.000007811378,0.000012535936,0.00008584778],"genre_scores_gemma":[0.99783665,0.0013234905,0.00009358741,0.000049262013,0.000022200926,0.000005611838,0.000049430295,0.0000070606234,0.0006126908],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991163,0.00009858929,0.00026600147,0.00024867346,0.000020608531,0.00024984518],"domain_scores_gemma":[0.99964386,0.00006540026,0.00006338381,0.0001669469,0.00003062129,0.000029784962],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000049170787,0.00012373179,0.00044587927,0.00010351577,0.00006475109,8.7622067e-7,0.000059816142,0.00027389117,0.00046683563],"category_scores_gemma":[0.000044386386,0.000095596944,0.000055536842,0.00008225706,0.00068214687,0.00003148461,0.000059201797,0.00023382058,0.000014189112],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008300151,0.0000799307,0.19970056,0.00002960001,0.000023817065,0.000015168799,0.00011674725,2.2760527e-7,0.79827297,0.000016822341,0.00027743191,0.00063673],"study_design_scores_gemma":[0.0040172185,0.0018062607,0.6454452,0.0001780216,0.00005040838,0.0005708497,0.00016543108,0.000008850009,0.3418432,0.000031531228,0.005672048,0.00021098742],"about_ca_topic_score_codex":0.000092272996,"about_ca_topic_score_gemma":0.00017531341,"teacher_disagreement_score":0.45642975,"about_ca_system_score_codex":0.00007555094,"about_ca_system_score_gemma":0.00011696306,"threshold_uncertainty_score":0.51115227},"labels":[],"label_agreement":null},{"id":"W1981351015","doi":"10.1111/j.1399-3062.2009.00461.x","title":"Severe cerebral aspergillosis after liver transplant","year":2009,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; McGill University","funders":"","keywords":"Medicine; Aspergillosis; Liver transplantation; Differential diagnosis; Complication; Autoimmune hepatitis; Epidemiology; Pathology; Transplantation; Hepatitis; Intensive care medicine; Immunology; Surgery","score_opus":0.008707813046937653,"score_gpt":0.2312263555213503,"score_spread":0.22251854247441263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981351015","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892581,0.0009716447,0.00047965994,0.0005533319,0.00011597201,0.00049075054,0.00038712472,0.0002986695,0.0074447184],"genre_scores_gemma":[0.9957736,0.00072855025,0.000039838404,0.0023957745,0.00015814068,0.000028023967,0.00014650922,0.000024871846,0.00070464914],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982928,0.00005602679,0.00030901737,0.0004874564,0.00037925484,0.00047545013],"domain_scores_gemma":[0.99877495,0.00003894919,0.00003634763,0.00042035402,0.00006866181,0.00066073623],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000100273355,0.00031238399,0.00037481982,0.000104775296,0.00012807673,0.00002790515,0.00007512523,0.00012521283,0.0014148529],"category_scores_gemma":[0.000013252421,0.00026067643,0.00039683082,0.0001833166,0.00008336917,0.00016778772,0.000003654991,0.0002761249,0.00024105991],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0055466723,0.0010591419,0.98559326,0.00038935692,0.00010118422,0.0027182905,0.0005077258,0.000010446501,0.0007438115,0.00041553224,0.0003514072,0.002563159],"study_design_scores_gemma":[0.0018911784,0.00039620826,0.99478,0.0003213038,0.000727119,0.00018857431,0.000011206186,0.00014601937,0.0002726639,0.00036357253,0.00053221633,0.00036991385],"about_ca_topic_score_codex":0.000055309418,"about_ca_topic_score_gemma":0.00012783919,"teacher_disagreement_score":0.009186752,"about_ca_system_score_codex":0.000087705084,"about_ca_system_score_gemma":0.0001421309,"threshold_uncertainty_score":0.99998456},"labels":[],"label_agreement":null},{"id":"W1981700833","doi":"10.1186/1710-1492-4-4-157","title":"Patterns of Expression of Vaginal T-Cell Activation Markers during Estrogen-Maintained Vaginal Candidiasis","year":2008,"lang":"en","type":"article","venue":"Allergy Asthma and Clinical Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"CD28; Estrogen; CD3; Vagina; Biology; T cell; IL-2 receptor; Internal medicine; Endocrinology; Immunology; Medicine; Immune system; CD8","score_opus":0.016872272766594858,"score_gpt":0.28712517518470704,"score_spread":0.2702529024181122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981700833","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983921,0.00043835456,0.0004672234,0.00018233834,0.000077729506,0.00012496063,0.000005160997,0.000015411242,0.00029670415],"genre_scores_gemma":[0.99699146,0.0022156287,0.00035211028,0.00004824201,0.000046216304,0.0000048331385,0.000019314783,0.000011872588,0.00031030097],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99847394,0.0001588421,0.000668336,0.0003092423,0.00016140332,0.0002282138],"domain_scores_gemma":[0.99893445,0.00026213782,0.0002672197,0.00031252616,0.00013469931,0.00008898331],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022363452,0.00014158376,0.0005154968,0.00007165592,0.00007800441,0.0000019749564,0.000086746666,0.00022233574,0.00020959257],"category_scores_gemma":[0.00019269511,0.00012079511,0.00016628485,0.00008015836,0.00035122334,0.00008366845,0.00007275729,0.00029099523,0.0000026637458],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005806747,0.0006548882,0.81132334,0.00009980445,0.00024788946,0.00004985749,0.0001606259,0.0000015185869,0.17903087,0.00013062547,0.000030593128,0.0024632232],"study_design_scores_gemma":[0.002758294,0.0011267973,0.91984946,0.00012692236,0.000022079908,0.00003999473,0.0005194261,0.000011721191,0.07520431,0.000027548245,0.0002239641,0.00008945822],"about_ca_topic_score_codex":0.00025989398,"about_ca_topic_score_gemma":0.000034887133,"teacher_disagreement_score":0.108526126,"about_ca_system_score_codex":0.000024733388,"about_ca_system_score_gemma":0.00011731413,"threshold_uncertainty_score":0.4925882},"labels":[],"label_agreement":null},{"id":"W1982297517","doi":"10.1111/j.1567-1364.2002.tb00090.x","title":"The sixth ASM<i>Candida</i>and candidiasis conference","year":2002,"lang":"en","type":"article","venue":"FEMS Yeast Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Session (web analytics); Library science; Downtown; Biology; History; Archaeology; Computer science; World Wide Web","score_opus":0.11189301949545422,"score_gpt":0.36602312904524653,"score_spread":0.2541301095497923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982297517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9267533,0.0027679603,0.000020732045,0.005584021,0.000064407446,0.00039472606,0.000010168746,0.000032732558,0.06437199],"genre_scores_gemma":[0.9642108,0.0013557068,0.000024816998,0.000071904666,0.00013621648,0.000027716518,0.0000026953123,0.000012611709,0.034157537],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99811226,0.00015552375,0.00016413922,0.00029833964,0.0007253046,0.0005444026],"domain_scores_gemma":[0.9986223,0.00030914054,0.000020799152,0.00046916943,0.00031553168,0.00026307296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00109512,0.00009964913,0.00017586816,0.0000666271,0.0005330638,0.000143166,0.00015771626,0.00007640802,0.00066008605],"category_scores_gemma":[0.00064966525,0.00006161939,0.000050415423,0.00029513816,0.00063333707,0.00007009866,0.00009814858,0.00054891204,0.00037394068],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014125089,0.000600439,0.44651255,0.00039437125,0.00021670162,0.0003502583,0.004800778,4.5385502e-7,0.030535005,0.008893497,0.182134,0.32414943],"study_design_scores_gemma":[0.0022579653,0.0007700547,0.7254614,0.00026837675,0.000041543284,0.00009142823,0.0047519486,0.001531576,0.0047948114,0.0017762119,0.25791895,0.00033569642],"about_ca_topic_score_codex":0.0004034013,"about_ca_topic_score_gemma":0.0004929539,"teacher_disagreement_score":0.32381374,"about_ca_system_score_codex":0.00007626031,"about_ca_system_score_gemma":0.00013616856,"threshold_uncertainty_score":0.7227479},"labels":[],"label_agreement":null},{"id":"W1982476880","doi":"10.1016/j.archoralbio.2015.03.002","title":"Distribution of Candida albicans and non-albicans Candida species in oral candidiasis patients: Correlation between cell surface hydrophobicity and biofilm forming activities","year":2015,"lang":"en","type":"article","venue":"Archives of Oral Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":115,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Faculty of Dentistry, McGill University","keywords":"Biofilm; Candida albicans; Microbiology; Corpus albicans; Candida parapsilosis; Biology; Candida glabrata; Candida krusei; Candida tropicalis; Oral cavity; Bacteria; Medicine; Dentistry","score_opus":0.01917026926106537,"score_gpt":0.26413961894303317,"score_spread":0.2449693496819678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982476880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99802643,0.00016859961,0.0003936743,0.00008507505,0.000040543437,0.00025663347,0.00047033073,0.0000065565537,0.00055216893],"genre_scores_gemma":[0.99894434,0.00016241758,0.00038547267,0.000012178797,0.0000130947565,0.0000024043113,0.00040160643,0.000006638953,0.00007184816],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990319,0.00007598632,0.00033111582,0.00023676733,0.00009436642,0.00022984661],"domain_scores_gemma":[0.9992944,0.00024316207,0.00016321123,0.00013562868,0.00004212867,0.00012149777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016205986,0.00013975124,0.00050343707,0.00008054057,0.00004071262,0.0000044541785,0.000044711924,0.00009154276,0.0000060251555],"category_scores_gemma":[0.00012274468,0.000114726274,0.000044223096,0.00011984377,0.0006736967,0.00010301329,0.00006515317,0.0001402235,2.567212e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054189167,0.0000761626,0.9794355,0.00008329334,0.00002164476,0.0000013838819,0.001132615,0.0000050457443,0.016686538,0.000048052952,0.000023109045,0.0019447845],"study_design_scores_gemma":[0.0017064646,0.0009185947,0.98166174,0.000060172573,0.000051238574,0.0000010226418,0.0011008998,0.00019821309,0.013797612,0.00027722446,0.00012043862,0.00010641132],"about_ca_topic_score_codex":0.01034161,"about_ca_topic_score_gemma":0.0040790006,"teacher_disagreement_score":0.006262609,"about_ca_system_score_codex":0.000052996966,"about_ca_system_score_gemma":0.00012228046,"threshold_uncertainty_score":0.9962486},"labels":[],"label_agreement":null},{"id":"W1983265239","doi":"10.1371/journal.pgen.1003390","title":"Genetic and Genomic Architecture of the Evolution of Resistance to Antifungal Drug Combinations","year":2013,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"University of Toronto; Natural Sciences and Engineering Research Council of Canada; Burroughs Wellcome Fund","keywords":"Biology; Antifungal drug; Drug resistance; Calcineurin; Genetics; Candida albicans; Transplantation","score_opus":0.008324847861307197,"score_gpt":0.2214402525035587,"score_spread":0.2131154046422515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983265239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995742,0.0016972651,0.00030017275,0.0007322429,0.00003813367,0.0006362247,0.000020313826,0.0000081108765,0.0008254888],"genre_scores_gemma":[0.9963955,0.000045653367,0.0025584341,0.0000684483,0.000024057159,0.000010921071,0.0000011860353,0.000011494543,0.00088426535],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99915,0.000047095073,0.00026254402,0.00017153625,0.00023357882,0.00013528188],"domain_scores_gemma":[0.9991444,0.000052022355,0.000087318156,0.00042142026,0.00022010533,0.00007476642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006552968,0.00008872122,0.00019839805,0.00005327833,0.000053731335,0.0000055342566,0.00011322853,0.000044334978,0.00003290872],"category_scores_gemma":[0.000107819564,0.000064903565,0.000055903613,0.00019035203,0.00019096618,0.000012324952,0.000065886525,0.00009888173,0.0000063774473],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004392636,0.00018538463,0.46062702,0.00030005546,0.000035444027,4.777329e-7,0.00057496055,0.000053861208,0.53690845,0.00022952222,0.0005101088,0.0005308326],"study_design_scores_gemma":[0.00032979416,0.000069960945,0.94603056,0.000111965914,0.00007357221,0.0000018787886,0.0002206816,0.000263941,0.05127726,0.0014484142,0.00010793806,0.00006400453],"about_ca_topic_score_codex":0.000025939215,"about_ca_topic_score_gemma":0.00018528718,"teacher_disagreement_score":0.48563117,"about_ca_system_score_codex":0.000052684343,"about_ca_system_score_gemma":0.00010285366,"threshold_uncertainty_score":0.26466906},"labels":[],"label_agreement":null},{"id":"W1983926295","doi":"10.1016/j.diagmicrobio.2010.03.017","title":"Clinical utility and prognostic value of bronchoalveolar lavage galactomannan in patients with hematologic malignancies","year":2010,"lang":"en","type":"article","venue":"Diagnostic Microbiology and Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Sherbrooke; Université de Montréal; Hôpital Maisonneuve-Rosemont; McGill University Health Centre","funders":"","keywords":"Galactomannan; Bronchoalveolar lavage; Medicine; Internal medicine; Hematologic Neoplasms; Gastroenterology; Immunology; Aspergillosis; Lung; Transplantation","score_opus":0.005919290562397191,"score_gpt":0.25249149822199557,"score_spread":0.2465722076595984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983926295","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984819,0.0004812859,0.000018547478,0.000058416255,0.00009699932,0.00066762633,0.0000666758,0.00002776749,0.00010077213],"genre_scores_gemma":[0.99947226,0.00012705868,0.000053970125,0.00022228931,0.00001681363,0.000018677043,0.00006957081,0.0000087895205,0.0000105683075],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988015,0.00013507066,0.00037613173,0.0004000721,0.0000497728,0.00023743401],"domain_scores_gemma":[0.99831957,0.0009899519,0.0001088007,0.00025679762,0.00011715354,0.00020774451],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032807112,0.00016905727,0.00045610822,0.0000654937,0.00006147528,0.0000066516222,0.00004280548,0.0001848001,0.000054502565],"category_scores_gemma":[0.0041672955,0.00012137393,0.00005920241,0.000078780475,0.0009524882,0.00006004972,0.00005047817,0.0003417103,0.000003450349],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005935672,0.0011526865,0.99637693,0.00029913642,0.000033605134,0.00003801834,0.000045249362,1.0244156e-7,0.00076980266,0.00028732666,0.00006598279,0.00033757856],"study_design_scores_gemma":[0.0022892745,0.00072424544,0.99608743,0.0001492692,0.00013653118,0.0000140267,0.0000145913555,0.0000063479306,0.0001321472,0.00024514538,0.000077307865,0.00012368766],"about_ca_topic_score_codex":0.000029228424,"about_ca_topic_score_gemma":0.00019926904,"teacher_disagreement_score":0.0038392243,"about_ca_system_score_codex":0.000008220076,"about_ca_system_score_gemma":0.00011060627,"threshold_uncertainty_score":0.4988943},"labels":[],"label_agreement":null},{"id":"W1983958707","doi":"10.2165/11538690-000000000-00000","title":"Population Pharmacokinetic Evaluation with External Validation and Bayesian Estimator of Voriconazole in Liver Transplant Recipients","year":2011,"lang":"en","type":"article","venue":"Clinical Pharmacokinetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Addiction and Mental Health","funders":"","keywords":"NONMEM; Medicine; Pharmacokinetics; Covariate; Population; Statistics; Dosing; Confidence interval; Area under the curve; Internal medicine; Mathematics","score_opus":0.10715141225350172,"score_gpt":0.39380757758989754,"score_spread":0.2866561653363958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983958707","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99536127,0.00030769306,0.002833524,0.000035159854,0.00016409853,0.00062486756,0.000009933362,0.000017116994,0.0006463171],"genre_scores_gemma":[0.9953689,0.00053374993,0.0038293914,0.00009085934,0.000078652796,0.0000137386805,0.000034915007,0.000016727137,0.000033064833],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981667,0.0001900244,0.00072895136,0.00032717315,0.0004149578,0.00017223091],"domain_scores_gemma":[0.999153,0.0001296602,0.00019529175,0.00017516421,0.00019060906,0.00015626903],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010028309,0.00014389982,0.00035095846,0.00009472261,0.00002543008,0.0000051848956,0.00006634039,0.00009107496,0.00040998886],"category_scores_gemma":[0.0001274741,0.000118011514,0.00006243131,0.00017532644,0.00013628897,0.00010491295,0.000016002514,0.00024052449,0.0000052853406],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019604554,0.00059258175,0.95945096,0.00011133794,0.000031077772,0.000020727264,0.0001990484,0.000029923109,0.003010022,0.000027278224,0.00002298671,0.034543615],"study_design_scores_gemma":[0.00433379,0.0004650394,0.9539333,0.00025681587,0.000455452,0.000012481484,0.000014925282,0.033419173,0.0067917723,0.00018853905,0.000011031068,0.00011769075],"about_ca_topic_score_codex":0.000056361634,"about_ca_topic_score_gemma":0.00001525379,"teacher_disagreement_score":0.034425925,"about_ca_system_score_codex":0.000039262748,"about_ca_system_score_gemma":0.000056360343,"threshold_uncertainty_score":0.48123696},"labels":[],"label_agreement":null},{"id":"W1984051780","doi":"10.1128/jcm.00131-14","title":"Epidemiology of Candida kefyr in Patients with Hematologic Malignancies","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; U.S. Public Health Service; Astellas Foundation for Research on Metabolic Disorders","keywords":"Epidemiology; Incidence (geometry); Amphotericin B; Medicine; Fluconazole; Internal medicine; Retrospective cohort study; Odds ratio; Biology; Antifungal; Dermatology","score_opus":0.043734027133149715,"score_gpt":0.36685447372901464,"score_spread":0.3231204465958649,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984051780","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99847156,0.00028369078,0.00021267936,0.00055902987,0.00021638461,0.00010867683,0.0000050952285,0.000002765074,0.00014013381],"genre_scores_gemma":[0.99675035,0.00005729386,0.0020722437,0.0009803594,0.00007822833,4.8524225e-7,0.000005356465,0.0000059301155,0.000049758226],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99710256,0.00047187565,0.0019690804,0.00017462282,0.000046350062,0.0002355062],"domain_scores_gemma":[0.9960571,0.0021327962,0.001137348,0.00020622168,0.00036175683,0.000104781466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029809037,0.00010972626,0.001619245,0.00008995802,0.000012888762,4.2913442e-7,0.00012556711,0.00027097165,0.000059325837],"category_scores_gemma":[0.006779201,0.00006187089,0.00023379426,0.00009389579,0.00051057944,0.000030402758,0.000028195138,0.0004621183,0.000006335174],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00295415,0.00044519623,0.9942962,0.00005881504,0.000056882767,0.000009799575,0.0000150761325,0.0000019193499,0.0010197778,0.0002427633,0.0002811289,0.0006182735],"study_design_scores_gemma":[0.003620929,0.004122288,0.99038047,0.00019169295,0.00004679413,0.00006157544,0.000022009817,0.0000018661533,0.00019838555,0.0005492863,0.00074600236,0.000058722497],"about_ca_topic_score_codex":0.000011483485,"about_ca_topic_score_gemma":0.00007411262,"teacher_disagreement_score":0.00391577,"about_ca_system_score_codex":0.00002433452,"about_ca_system_score_gemma":0.00015739267,"threshold_uncertainty_score":0.8115826},"labels":[],"label_agreement":null},{"id":"W1984318957","doi":"10.1139/w06-125","title":"Expression of<i>CaPTC7</i>is developmentally regulated during serum-induced morphogenesis in the human fungal pathogen Candida albicans","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Candida albicans; Morphogenesis; Microbiology; Biology; Fungal pathogen; Pathogen; Human pathogen; Cell biology; Gene; Genetics","score_opus":0.01606346438708616,"score_gpt":0.2514067431050981,"score_spread":0.23534327871801192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984318957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99847907,0.0005286795,0.000008853622,0.00035018576,0.00011528611,0.00017199716,0.000055226985,0.000002485893,0.0002881966],"genre_scores_gemma":[0.9990552,0.000015367696,0.0001896787,0.0004874867,0.000070618895,7.665098e-7,0.000015524565,0.000013699853,0.00015164187],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99847096,0.00011902932,0.0006957324,0.00017715713,0.00009116851,0.0004459589],"domain_scores_gemma":[0.9989725,0.000055510063,0.00027073725,0.00023030763,0.00018624382,0.0002847272],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009909851,0.0001501704,0.00040544922,0.00032768113,0.00013879502,0.000007169779,0.00025114877,0.00019432695,0.00031961576],"category_scores_gemma":[0.000075535805,0.000107015425,0.00013203449,0.000255108,0.00015087725,0.00004442077,0.00001413367,0.0003283401,0.0000032119322],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010685795,0.00001979373,0.30404526,0.000023745524,0.000025959209,0.0006554349,0.0011351423,5.8261594e-7,0.69348145,0.0000044327276,0.00027275964,0.00022859179],"study_design_scores_gemma":[0.0008239286,0.00014774354,0.63644725,0.00016263663,0.000028267117,0.0010563289,0.0010775331,8.547569e-8,0.3594667,0.000009743597,0.0006960896,0.000083706465],"about_ca_topic_score_codex":0.0025762469,"about_ca_topic_score_gemma":0.08307773,"teacher_disagreement_score":0.3340147,"about_ca_system_score_codex":0.00030857648,"about_ca_system_score_gemma":0.0011423096,"threshold_uncertainty_score":0.9336537},"labels":[],"label_agreement":null},{"id":"W1984345139","doi":"10.1186/cc5270","title":"Candida airway colonization is associated with worse outcomes","year":2007,"lang":"en","type":"article","venue":"Critical Care","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Hôpital du Sacré-Cœur de Montréal; Montreal General Hospital; Hôpital de l'Enfant-Jésus","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Colonization; Airway; Ventilator-associated pneumonia; Pneumonia; Candida infections; Intensive care medicine; Clinical significance; Internal medicine; Microbiology; Surgery; Biology; Dermatology; Antifungal","score_opus":0.019187182141024293,"score_gpt":0.3317373100570084,"score_spread":0.31255012791598413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984345139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98727995,0.00024367128,0.0011783501,0.0015162816,0.00008129518,0.00017806116,0.00002766027,0.000071692295,0.009423063],"genre_scores_gemma":[0.9967196,0.0000018809276,0.00015172515,0.0019045953,0.000043455188,0.0000029531536,0.000051802766,0.000013559853,0.001110433],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99906236,0.000018327846,0.00015368308,0.00019719831,0.00029523193,0.00027318994],"domain_scores_gemma":[0.9989805,0.00022868693,0.000015430467,0.00016650908,0.0004328177,0.00017603711],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014469631,0.00009777575,0.00021871648,0.0000326668,0.000094001494,0.000014211618,0.00003597795,0.00010927829,0.00036469486],"category_scores_gemma":[0.001299781,0.00007104974,0.00005640866,0.00015768639,0.00016193313,0.000046691905,0.0000116329475,0.00015287401,0.000032548185],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017993707,0.00007816401,0.99650633,0.000093965435,0.00001894228,0.00016728127,0.0007324019,1.2572812e-7,0.00013495889,0.0006989124,0.00072069553,0.0006682854],"study_design_scores_gemma":[0.00074899604,0.00030934534,0.99302197,0.00010046703,0.00011788165,0.000003926054,0.0029555082,0.000008465198,0.0020697091,0.00005984572,0.00048815936,0.000115741044],"about_ca_topic_score_codex":0.000029993287,"about_ca_topic_score_gemma":0.00077445747,"teacher_disagreement_score":0.00943967,"about_ca_system_score_codex":0.00017551988,"about_ca_system_score_gemma":0.00009789043,"threshold_uncertainty_score":0.3993153},"labels":[],"label_agreement":null},{"id":"W1985245427","doi":"10.1016/j.mib.2004.06.005","title":"Candida morphogenesis and host–pathogen interactions","year":2004,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":191,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Biology; Morphogenesis; Candida albicans; Virulence; Pathogen; Fungal pathogen; Microbiology; Host (biology); Genetics; Gene","score_opus":0.09131805827262555,"score_gpt":0.41481757720764323,"score_spread":0.32349951893501766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985245427","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00034475827,0.99481016,0.00003080957,0.000043550885,0.0034531155,0.00081655587,0.00042933578,0.000026463304,0.000045260917],"genre_scores_gemma":[0.00015468248,0.9978489,0.00008403412,0.000013316974,0.00029473068,0.00008337755,0.001370314,0.000030523817,0.00012009306],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981463,0.00017414916,0.0006679017,0.0006350182,0.000043539,0.00033309465],"domain_scores_gemma":[0.99913245,0.00012544212,0.00020877387,0.0003682265,0.000054980155,0.00011013078],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019339973,0.0003699147,0.0014852824,0.0003114202,0.00005817653,0.000011530216,0.00011759807,0.00031307447,0.0001497321],"category_scores_gemma":[0.00009694774,0.00029358888,0.00031345597,0.00025873407,0.00019697536,0.000034297995,0.000104994564,0.0006521539,0.000106495354],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088234476,0.00050294294,0.0050141932,0.0948845,0.00018947826,0.0000176074,0.00014555009,1.2513087e-7,0.0009314657,0.00019219994,0.0033633285,0.89467037],"study_design_scores_gemma":[0.00040900183,0.000070958056,0.00056925195,0.028299037,0.00017817074,0.00037837724,0.000019485158,2.0470164e-7,0.0000033090619,0.000009908147,0.9698243,0.00023795826],"about_ca_topic_score_codex":0.000035846686,"about_ca_topic_score_gemma":0.000036678775,"teacher_disagreement_score":0.966461,"about_ca_system_score_codex":0.0003866566,"about_ca_system_score_gemma":0.00059136155,"threshold_uncertainty_score":0.9999516},"labels":[],"label_agreement":null},{"id":"W1985796013","doi":"10.1111/j.1574-6968.2007.00745.x","title":"A subpopulation of<i>Candida albicans</i>and<i>Candida tropicalis</i>biofilm cells are highly tolerant to chelating agents","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biofilm; Candida albicans; Candida tropicalis; Microbiology; Chelation; Biology; Corpus albicans; Population; Antimicrobial; Chemistry; Bacteria","score_opus":0.012329574226616829,"score_gpt":0.25735214114308647,"score_spread":0.24502256691646965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985796013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99441516,0.0001224058,0.0014243476,0.0030599558,0.00027785078,0.000472313,0.00005687607,0.000042026266,0.00012907032],"genre_scores_gemma":[0.98772657,0.000011211468,0.0014243161,0.010370759,0.00014660256,0.000005692465,0.00008317462,0.000021835132,0.00020982556],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983213,0.00005106863,0.00055389316,0.00047789037,0.00010337708,0.000492499],"domain_scores_gemma":[0.9990998,0.00011293451,0.00020451103,0.0003254262,0.000070559254,0.00018679933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035442406,0.00022757583,0.0005470382,0.00014752464,0.0000968059,0.000009640458,0.0001030137,0.00018974271,0.000073792864],"category_scores_gemma":[0.000073347175,0.00019594259,0.00013340433,0.00021967749,0.00020285198,0.00004703171,0.000053655844,0.00025389463,0.00002780114],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003479561,0.000042171407,0.32509562,0.000052055886,0.00004108818,0.000035690824,0.00027786143,0.0000057462985,0.6713549,0.00001187862,0.0022983681,0.0004366882],"study_design_scores_gemma":[0.0013903877,0.00021831915,0.8087053,0.00019254952,0.0000885755,0.00004125338,0.00020055694,0.000012114763,0.1806367,0.0000060643024,0.008253134,0.0002550823],"about_ca_topic_score_codex":0.00033134784,"about_ca_topic_score_gemma":0.00034104014,"teacher_disagreement_score":0.49071816,"about_ca_system_score_codex":0.000109215856,"about_ca_system_score_gemma":0.000029381572,"threshold_uncertainty_score":0.7990307},"labels":[],"label_agreement":null},{"id":"W1986207589","doi":"10.1371/journal.ppat.1000612","title":"Transcriptional Regulation of Carbohydrate Metabolism in the Human Pathogen Candida albicans","year":2009,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":258,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Glycolysis; Biochemistry; Candida albicans; Transcriptional regulation; Carbohydrate metabolism; Transcription factor; Metabolism; Gene; Microbiology","score_opus":0.026507313160750317,"score_gpt":0.2714306766716167,"score_spread":0.24492336351086638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986207589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99455696,0.00036630538,0.000054919714,0.00078892923,0.000025825095,0.00037834575,0.00011029834,0.00001856223,0.0036998398],"genre_scores_gemma":[0.99890906,0.000028885186,0.00020174819,0.00042998328,0.00010202019,0.000012265334,0.000115340044,0.000008559049,0.00019213466],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99868625,0.000118178534,0.0003488744,0.00022352533,0.00041649144,0.00020668696],"domain_scores_gemma":[0.9993867,0.000033239023,0.0000727072,0.0003535387,0.00009654135,0.000057264857],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035538914,0.00012348269,0.0002986039,0.00009105512,0.00007036924,0.000007403104,0.00010357111,0.000079176985,0.0001486657],"category_scores_gemma":[0.000056106543,0.00008649207,0.00014024423,0.00028704727,0.000073486815,0.000057905043,0.000004223318,0.00015817197,0.000004702128],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007172063,0.00032067558,0.032292046,0.000027523787,0.000017932682,0.000022025359,0.0014846672,0.000006971559,0.9611405,0.0040639266,0.00003672913,0.0005152613],"study_design_scores_gemma":[0.00059171434,0.00011960701,0.9900288,0.00005026784,0.00014162884,0.0000042660945,0.00027835343,0.000105736704,0.006441311,0.0018015066,0.0003491128,0.00008772],"about_ca_topic_score_codex":0.000053608,"about_ca_topic_score_gemma":0.0002096123,"teacher_disagreement_score":0.95773673,"about_ca_system_score_codex":0.00003800013,"about_ca_system_score_gemma":0.00007425891,"threshold_uncertainty_score":0.35270444},"labels":[],"label_agreement":null},{"id":"W1986944636","doi":"10.1139/g05-117","title":"Farnesol restores wild-type colony morphology to 96% of<i>Candida albicans</i>colony morphology variants recovered following treatment with mutagens","year":2006,"lang":"en","type":"article","venue":"Genome","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"University of Otago","keywords":"Farnesol; Candida albicans; Biology; Mutant; Hypha; Microbiology; Corpus albicans; Yeast; Quorum sensing; Wild type; Morphogenesis; Virulence; Biochemistry; Gene","score_opus":0.015266891593897602,"score_gpt":0.2611828591767869,"score_spread":0.2459159675828893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986944636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937027,0.0006844523,0.00025555235,0.0006216046,0.0002674114,0.0009434293,0.00011659834,0.000061487175,0.0033467463],"genre_scores_gemma":[0.98977625,0.00006302357,0.002235187,0.0005957286,0.00016817526,0.000055474982,0.00017976825,0.000047500413,0.006878881],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978376,0.00008977871,0.00049296377,0.00067556393,0.00028593122,0.0006181359],"domain_scores_gemma":[0.99862885,0.00011772396,0.0001585577,0.00074123667,0.00013989511,0.00021375966],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023407208,0.00031934585,0.00087079586,0.0001763492,0.00012593096,0.000011791506,0.00016031068,0.00021178408,0.00042891706],"category_scores_gemma":[0.000080810336,0.0002524794,0.00017413833,0.00047710742,0.00016817288,0.000055849294,0.000050069542,0.00015431181,0.0001052836],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004009206,0.00056347245,0.23302707,0.000047760248,0.000351898,0.0019567397,0.00045844668,0.00012946299,0.7581127,0.00009363392,0.0008618776,0.00038766814],"study_design_scores_gemma":[0.00491449,0.009590484,0.9408376,0.00007450496,0.00060966,0.00025931429,0.00030049423,0.000009761927,0.006396189,0.00016733634,0.036366858,0.00047329196],"about_ca_topic_score_codex":0.0030255208,"about_ca_topic_score_gemma":0.0018132236,"teacher_disagreement_score":0.75171655,"about_ca_system_score_codex":0.00039330407,"about_ca_system_score_gemma":0.0003811042,"threshold_uncertainty_score":0.9999927},"labels":[],"label_agreement":null},{"id":"W1987196882","doi":"10.1111/j.1399-3062.2008.00324.x","title":"Primary cutaneous mucormycosis in a lung transplant recipient: case report and concise review of the literature","year":2008,"lang":"en","type":"review","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Mucormycosis; Zygomycosis; Medicine; Lung; Solid organ; Incidence (geometry); Organ transplantation; Hematopoietic stem cell transplantation; Dermatology; Transplantation; Disease; Pathology; Surgery; Amphotericin B; Internal medicine; Antifungal","score_opus":0.01465991296255662,"score_gpt":0.28627346318622043,"score_spread":0.2716135502236638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987196882","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011534718,0.98229444,0.000006511029,0.000047160676,0.00019076187,0.0033169384,0.0019477583,0.00005969695,0.00060198636],"genre_scores_gemma":[0.026408426,0.9718662,0.000007438048,0.0003594386,0.000067616784,0.00017248586,0.00088204414,0.00006120334,0.00017518361],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99629766,0.0003662635,0.0015997473,0.0008048125,0.00052174286,0.00040977148],"domain_scores_gemma":[0.9975582,0.0003090039,0.0004933316,0.0010565197,0.00014433716,0.00043864298],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00033533867,0.0006723027,0.0026673602,0.00021122748,0.00013726507,0.000015961577,0.00015681204,0.0003441878,0.000051161504],"category_scores_gemma":[0.00016584297,0.0004246224,0.0012279751,0.0007911903,0.00025745356,0.000081860446,0.00002465575,0.0009568551,0.0000033794702],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000294051,0.0004373077,0.019693555,0.54837304,0.00021355793,0.39925227,0.00031296437,1.5776408e-7,8.1321974e-7,0.000010299956,0.00026282493,0.031149177],"study_design_scores_gemma":[0.0006684928,0.00008133727,0.0020115662,0.49437985,0.0053044334,0.44968566,0.000002908908,0.0000023191235,6.683649e-7,0.000006576606,0.047435053,0.0004211517],"about_ca_topic_score_codex":0.00010435778,"about_ca_topic_score_gemma":0.00013898313,"teacher_disagreement_score":0.053993177,"about_ca_system_score_codex":0.0002631873,"about_ca_system_score_gemma":0.0011982685,"threshold_uncertainty_score":0.99982053},"labels":[],"label_agreement":null},{"id":"W1987223015","doi":"10.1016/s0022-3468(03)00215-x","title":"Zygomycotic infection of the neonatal upper extremity","year":2003,"lang":"en","type":"article","venue":"Journal of Pediatric Surgery","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Medicine; Zygomycosis; Soft tissue; Debridement (dental); Amputation; Surgery; Presentation (obstetrics); Elbow; Biopsy; Dermatology; Pathology; Amphotericin B","score_opus":0.02116986047022431,"score_gpt":0.25934230952043746,"score_spread":0.23817244905021315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987223015","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961121,0.0018339206,0.00019905882,0.00010889866,0.0010972514,0.00006223673,0.0000013679859,0.000004253672,0.0005808972],"genre_scores_gemma":[0.99794793,0.00076225953,0.000087784596,0.000057792004,0.00090106233,3.3393218e-7,2.9827916e-7,0.0000076064366,0.00023493535],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986458,0.00013509399,0.00056245254,0.000082929924,0.00043070823,0.00014301292],"domain_scores_gemma":[0.9984362,0.0005061726,0.0004756783,0.00019667184,0.00029627397,0.000088988665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012396333,0.000083996805,0.0003382774,0.00015586925,0.00004537902,0.0000052715527,0.000046194036,0.000074830816,0.00021457426],"category_scores_gemma":[0.002630525,0.00005073982,0.00051153504,0.00043056058,0.000049035112,0.00010869688,0.000010911429,0.00028472437,0.00000510955],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000089563226,0.00010586253,0.98914635,0.00008187204,0.00002440647,0.000022766551,0.000036543002,0.0000029701896,0.00022258298,0.000024309695,0.009040258,0.0012024922],"study_design_scores_gemma":[0.0002663729,0.00003524758,0.9961579,0.00003308367,0.00020263428,0.0001350984,0.000038586346,0.0000018387252,0.000844392,0.00013713939,0.0020968853,0.000050842253],"about_ca_topic_score_codex":0.000013383651,"about_ca_topic_score_gemma":0.0000065935424,"teacher_disagreement_score":0.0070115053,"about_ca_system_score_codex":0.000067356516,"about_ca_system_score_gemma":0.0005454821,"threshold_uncertainty_score":0.31491742},"labels":[],"label_agreement":null},{"id":"W1987629821","doi":"10.1016/j.celrep.2015.01.009","title":"Fitness Trade-Offs Associated with the Evolution of Resistance to Antifungal Drug Combinations","year":2015,"lang":"en","type":"article","venue":"Cell Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Biology; Drug resistance; Antifungal drug; Candida albicans; Multiple drug resistance; Experimental evolution; Drug; Virulence; Genetic Fitness; Adaptation (eye); Resistance (ecology); Genetics; Gene; Pharmacology; Ecology","score_opus":0.016471175491101123,"score_gpt":0.25403256538066776,"score_spread":0.23756138988956665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987629821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9744986,0.0004080708,0.0005844625,0.0016824292,0.00013466984,0.000489816,0.000006863738,0.000045055658,0.022150004],"genre_scores_gemma":[0.97944057,0.000002560351,0.00009871695,0.00008794776,0.00002697281,0.000014358993,0.00002379567,0.00001498667,0.02029007],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985377,0.00007352451,0.00034855833,0.00027588208,0.00056434347,0.0001999885],"domain_scores_gemma":[0.99856514,0.00009368165,0.00025812382,0.0005437104,0.0003758202,0.00016351571],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088315655,0.00011703595,0.00027337478,0.000053181862,0.00009679787,0.000011237864,0.00006883075,0.000059582544,0.000016648131],"category_scores_gemma":[0.00057270133,0.00007660753,0.000070543916,0.00046841663,0.00014363969,0.00006688469,0.000021388241,0.00015040286,0.0000040372797],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007340452,0.0015359134,0.8449792,0.00022089407,0.00010251044,0.0008470846,0.0031340383,0.00009324829,0.013733495,0.00064836856,0.13381913,0.00015206957],"study_design_scores_gemma":[0.0010411056,0.00022168888,0.9765069,0.00026999915,0.00015773297,0.00003609468,0.0029195377,0.000030125155,0.013333563,0.00046136926,0.004845195,0.00017671862],"about_ca_topic_score_codex":0.00005973817,"about_ca_topic_score_gemma":0.00052807893,"teacher_disagreement_score":0.13152766,"about_ca_system_score_codex":0.000296305,"about_ca_system_score_gemma":0.0005010479,"threshold_uncertainty_score":0.31239647},"labels":[],"label_agreement":null},{"id":"W1988173457","doi":"10.1016/j.addr.2008.09.003","title":"Corrigendum to “Enhancing drug absorption using lipids: A case study presenting the development and pharmacological evaluation of a novel lipid-based oral amphotericin B formulation for the treatment of systemic fungal infections” [Advanced Drug Delivery Reviews 60 (2008)692–701]","year":2008,"lang":"en","type":"erratum","venue":"Advanced Drug Delivery Reviews","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Amphotericin B; Drug; Pharmacology; Medicine; Absorption (acoustics); Chemistry; Antifungal; Dermatology; Materials science","score_opus":0.13384841513480922,"score_gpt":0.38330806206077095,"score_spread":0.24945964692596173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988173457","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86521894,0.101298235,0.006115148,0.00003545677,0.0037299674,0.023482991,0.000059487094,0.000041765026,0.000018039369],"genre_scores_gemma":[0.8971396,0.08443917,0.0101423,0.00019963941,0.0008440698,0.004438728,0.00029052424,0.00011912193,0.0023868438],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9929834,0.0011736307,0.0030935365,0.0011098064,0.0009801778,0.00065942336],"domain_scores_gemma":[0.9941432,0.0007311549,0.0024333135,0.0009605824,0.0015268191,0.00020492669],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0053094076,0.00087240804,0.0024466845,0.00029623235,0.0008244656,0.000036363625,0.00024155223,0.00019247783,0.00002328461],"category_scores_gemma":[0.00082176545,0.00052900915,0.0006715174,0.00079911714,0.00012248634,0.00033624878,0.00009545681,0.0004760322,0.0000051319353],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0062165908,0.011184769,0.015050497,0.017683852,0.0020265696,0.00013501293,0.04492553,0.0167036,0.07612826,0.0000026076443,0.029520465,0.7804223],"study_design_scores_gemma":[0.04756952,0.0070037274,0.011150405,0.046979405,0.035006303,0.0015496955,0.033733044,0.2930496,0.015909446,0.000012958982,0.50309384,0.004942061],"about_ca_topic_score_codex":0.00058432465,"about_ca_topic_score_gemma":0.0054334993,"teacher_disagreement_score":0.7754802,"about_ca_system_score_codex":0.0017957834,"about_ca_system_score_gemma":0.0012107124,"threshold_uncertainty_score":0.99971616},"labels":[],"label_agreement":null},{"id":"W1988399056","doi":"10.1378/chest.12-0400","title":"Bronchoscopic Removal of a Large Intracavitary Pulmonary Aspergilloma","year":2013,"lang":"en","type":"article","venue":"CHEST Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; University of Calgary","funders":"","keywords":"Aspergilloma; Medicine; Bronchoscopy; Aspergillosis; Airway; Aspergillus fumigatus; Surgery; Flexible bronchoscopy; Anorexia; Pneumonectomy; Radiology; Lung; Internal medicine","score_opus":0.012093875716334032,"score_gpt":0.2743181426271127,"score_spread":0.26222426691077866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988399056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9857861,0.0020880597,0.00023523608,0.0009268687,0.00016188069,0.00014864175,0.000003130645,0.00001552303,0.0106345955],"genre_scores_gemma":[0.9940523,0.00024962967,0.002859733,0.0003201147,0.0003637081,0.000002384757,0.000004938304,0.000014666743,0.0021325562],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988599,0.000037817663,0.00037218226,0.00014550584,0.000298013,0.00028661304],"domain_scores_gemma":[0.99917316,0.000038117123,0.00011692039,0.00023863249,0.00020208464,0.00023110358],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029687514,0.000113567236,0.00029537367,0.000068230795,0.00008528981,0.000015828693,0.000106003834,0.00009715724,0.0019242998],"category_scores_gemma":[0.00016633961,0.000085836364,0.0001536188,0.00011790488,0.00009222044,0.00019344414,0.000030483918,0.00044388406,0.00013050635],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032452113,0.0010203216,0.67491174,0.00066152785,0.00015762137,0.0024898245,0.00047250616,7.447512e-7,0.26304248,0.0003045854,0.008889886,0.047724243],"study_design_scores_gemma":[0.0007013,0.00020728612,0.98111224,0.00022038398,0.00004811549,0.0030422336,0.0004682015,0.000072765346,0.0036584088,0.0007350436,0.00963941,0.000094634335],"about_ca_topic_score_codex":0.000020482443,"about_ca_topic_score_gemma":0.000004396531,"teacher_disagreement_score":0.30620047,"about_ca_system_score_codex":0.0000713515,"about_ca_system_score_gemma":0.00015012841,"threshold_uncertainty_score":0.9989881},"labels":[],"label_agreement":null},{"id":"W1988429363","doi":"10.1080/13693780600803870","title":"Cerebral blastomycosis: a case series incorporating voriconazole in the treatment regimen","year":2006,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; Trillium Health Centre; University Health Network; William Osler Health System","funders":"","keywords":"Blastomycosis; Voriconazole; Itraconazole; Medicine; Blastomyces dermatitidis; Concomitant; Regimen; Dermatology; Surgery; Antifungal","score_opus":0.012726951827770882,"score_gpt":0.2787486560889408,"score_spread":0.2660217042611699,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988429363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9835451,0.00035548213,0.000046662266,0.009206414,0.00011080378,0.00037205414,0.0000039227425,0.000036608195,0.006322947],"genre_scores_gemma":[0.99716556,0.000032952757,0.00024320534,0.0011778258,0.00035340167,0.0000993493,0.000018476701,0.000009142612,0.00090010883],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985337,0.0002120511,0.00035334018,0.0002723364,0.00031049934,0.00031802646],"domain_scores_gemma":[0.99921733,0.00030136222,0.00006366334,0.00027429973,0.000036079327,0.00010726518],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054260116,0.00014126327,0.00034066048,0.00006277037,0.00010211769,0.000009632879,0.000094790885,0.00019303785,0.00045146706],"category_scores_gemma":[0.00028379878,0.00008283987,0.00007942509,0.00023736258,0.00029359735,0.000047635338,0.00002398533,0.0002658796,0.00004533988],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006915319,0.0019772246,0.92935723,0.00007605441,0.00004888205,0.043010153,0.0011148098,0.0000026718426,0.00045091694,0.007890708,0.007167261,0.008212536],"study_design_scores_gemma":[0.010167818,0.007265358,0.8681624,0.0002021156,0.00028412207,0.037649922,0.007823208,0.00075317576,0.000980304,0.008013269,0.058189224,0.0005090654],"about_ca_topic_score_codex":0.0010479229,"about_ca_topic_score_gemma":0.009865453,"teacher_disagreement_score":0.061194833,"about_ca_system_score_codex":0.00016074204,"about_ca_system_score_gemma":0.0002569776,"threshold_uncertainty_score":0.5505154},"labels":[],"label_agreement":null},{"id":"W1988447961","doi":"10.1002/jobm.200900434","title":"The polymorphism of protein phosphatase Z1 gene in <i>Candida albicans</i>","year":2010,"lang":"en","type":"article","venue":"Journal of Basic Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plant Biotechnology Institute","funders":"Institute of Materials Research and Engineering; Hungarian Science Foundation; Hungarian Scientific Research Fund; National Science Foundation","keywords":"Biology; Genetics; Gene; Genotyping; Genotype; Candida albicans; Allele; Hypervariable region; Molecular biology; DNA sequencing","score_opus":0.005892521736616263,"score_gpt":0.23952702286543961,"score_spread":0.23363450112882336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988447961","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945405,0.0027647468,0.000033050863,0.0019551103,0.00029315683,0.000198164,0.000027227514,0.0000023740952,0.00018562954],"genre_scores_gemma":[0.9983861,0.00015500604,0.00050755,0.00034000733,0.0001401378,0.0000019754673,0.000005584528,0.000008124723,0.00045553723],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886537,0.0000788605,0.00063087523,0.00011838552,0.000077346966,0.00022913933],"domain_scores_gemma":[0.9989596,0.00012713914,0.00039122376,0.00027477933,0.00016571667,0.00008151933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008979364,0.00010244121,0.00039982947,0.000076536606,0.000043120606,0.000004605159,0.00018447592,0.0001299727,0.00021240309],"category_scores_gemma":[0.0002983736,0.000059862497,0.00014718655,0.00012729714,0.0003587535,0.000038950373,0.000028555774,0.00058934547,0.0000066717653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00095040124,0.00013632228,0.026959108,0.000021856755,0.000036915313,0.00008096886,0.00006563244,1.8433957e-7,0.96727943,0.00024209762,0.0013156927,0.0029114052],"study_design_scores_gemma":[0.0028625093,0.00076287217,0.054632112,0.00012819558,0.000058120553,0.0009871265,0.00014287054,0.0000021124572,0.89372545,0.00034517748,0.04624477,0.00010865146],"about_ca_topic_score_codex":0.00007036096,"about_ca_topic_score_gemma":0.0004657662,"teacher_disagreement_score":0.073553935,"about_ca_system_score_codex":0.00003470519,"about_ca_system_score_gemma":0.00033379724,"threshold_uncertainty_score":0.25604457},"labels":[],"label_agreement":null},{"id":"W1989811002","doi":"10.1016/j.bbmt.2007.06.013","title":"High Incidence of Invasive Aspergillosis Associated with Intestinal Graft-versus-Host Disease following Nonmyeloablative Transplantation","year":2007,"lang":"en","type":"article","venue":"Biology of Blood and Marrow Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Université de Montréal; Astellas Pharma","keywords":"Medicine; Cumulative incidence; Daclizumab; Neutropenia; Hazard ratio; Internal medicine; Fludarabine; Hematopoietic stem cell transplantation; Immunosuppression; Transplantation; Aspergillosis; Gastroenterology; Surgery; Graft-versus-host disease; Alemtuzumab; Cyclophosphamide; Tacrolimus; Confidence interval; Immunology; Chemotherapy","score_opus":0.012720930041006346,"score_gpt":0.25890238870752497,"score_spread":0.2461814586665186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989811002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963349,0.00025435234,0.002720336,0.000068456044,0.000061333434,0.0002764321,0.00012330875,0.000020583522,0.00014028524],"genre_scores_gemma":[0.99779886,0.0006377653,0.0010574976,0.000030222544,0.000016811979,0.0000054599154,0.00043103797,0.000009014824,0.000013301353],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989841,0.00006524995,0.0003543587,0.00025287163,0.0001647697,0.00017868113],"domain_scores_gemma":[0.99884623,0.0006096137,0.00019099012,0.00009171782,0.00015649882,0.000104958744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035110692,0.00014565882,0.00033410208,0.00011892888,0.000062137486,0.0000025309166,0.000044952707,0.00010673354,0.000011795361],"category_scores_gemma":[0.0001733826,0.00011813045,0.00008244469,0.0001962793,0.00025887587,0.0001168083,0.0000033968422,0.00010506657,3.8604534e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007522614,0.00014167513,0.651123,0.00036596457,0.00023438662,0.000110852976,0.00074973365,0.0000019468207,0.33914712,0.00036163334,5.142552e-7,0.00024060857],"study_design_scores_gemma":[0.003922133,0.0011786881,0.8227509,0.0006904262,0.0015972535,0.000012846397,0.00025379888,0.0000047158533,0.16937402,0.00010573495,2.981626e-7,0.00010917427],"about_ca_topic_score_codex":0.00017090868,"about_ca_topic_score_gemma":0.001175773,"teacher_disagreement_score":0.17162795,"about_ca_system_score_codex":0.000015989248,"about_ca_system_score_gemma":0.000109768574,"threshold_uncertainty_score":0.48172197},"labels":[],"label_agreement":null},{"id":"W1990490872","doi":"10.1371/journal.pone.0036077","title":"Treatment of Aspergillus fumigatus in Patients with Cystic Fibrosis: A Randomized, Placebo-Controlled Pilot Study","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Ottawa Hospital; Capital District Health Authority; Western University; University of Toronto; Hospital for Sick Children; University of British Columbia; St. Michael's Hospital; McMaster University; University of Ottawa; University of Calgary; Centre Hospitalier de l’Université de Montréal","funders":"Hospital for Sick Children; Queen's University; Ottawa Hospital Research Institute; McMaster University; London Health Sciences Centre; Cystic Fibrosis Canada; Fetzer Institute","keywords":"Aspergillus fumigatus; Cystic fibrosis; Medicine; Placebo; Randomized controlled trial; Microbiology; Internal medicine; Pathology; Immunology; Biology; Alternative medicine","score_opus":0.027596208256380993,"score_gpt":0.2445390544674956,"score_spread":0.21694284621111462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990490872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928815,0.0006651693,0.000008554962,0.000031390606,0.000020247928,0.0056362385,0.000010250584,0.000024560037,0.0007220932],"genre_scores_gemma":[0.99852765,0.000028205524,0.0004513632,0.000015624622,0.000048123988,0.00042087573,0.000014758246,0.000020189414,0.0004731913],"study_design_codex":"observational","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9982147,0.00023770571,0.00047776353,0.00021917862,0.0005343708,0.00031625986],"domain_scores_gemma":[0.9988366,0.00037964663,0.00013743529,0.00036531122,0.00013586752,0.00014518156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036987694,0.0001995189,0.0016282584,0.00009879699,0.000031218216,0.0000051130755,0.00004426818,0.00003495937,0.00009360511],"category_scores_gemma":[0.00041712887,0.00011827033,0.00009374793,0.00014840877,0.000091214366,0.00007783725,0.000012808493,0.000079348654,0.000021774667],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.45498276,0.05273466,0.49040473,0.00006879329,0.0006930494,0.000003495226,0.0006053477,4.885234e-7,0.00042468772,0.0000071200147,0.0000010422877,0.0000738452],"study_design_scores_gemma":[0.50788754,0.013268461,0.4765706,0.00017985237,0.0013106904,1.7003596e-7,0.00020896136,0.00002368114,0.00046191804,0.000003806713,6.485236e-7,0.00008363321],"about_ca_topic_score_codex":0.00014894533,"about_ca_topic_score_gemma":0.000112299815,"teacher_disagreement_score":0.052904807,"about_ca_system_score_codex":0.00017060763,"about_ca_system_score_gemma":0.00006490052,"threshold_uncertainty_score":0.4822924},"labels":[],"label_agreement":null},{"id":"W1990669830","doi":"10.3109/13693786.2012.656717","title":"Invasive<i>Mycoleptodiscus</i>fungal cellulitis and myositis","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Cellulitis; Myositis; Biology; Pathology; Medicine; Immunology","score_opus":0.010788682052129971,"score_gpt":0.27648494854405237,"score_spread":0.2656962664919224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990669830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9759164,0.0023113387,0.00019932266,0.004035773,0.00047186067,0.00027124237,0.000009598752,0.000069742055,0.016714731],"genre_scores_gemma":[0.9922827,0.00060743577,0.00027913865,0.004570909,0.0006462423,0.000027195923,0.00002057502,0.000016796377,0.0015490383],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99820524,0.00013996827,0.00030235166,0.00029026865,0.00044682634,0.0006153123],"domain_scores_gemma":[0.9982526,0.00044972813,0.000047137106,0.00024878533,0.000056887024,0.000944914],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006014985,0.00015838406,0.0004339785,0.000066420536,0.00010289171,0.000007416265,0.000091271024,0.0003430181,0.0063828],"category_scores_gemma":[0.0016082143,0.00012337418,0.00008710922,0.00013339549,0.00052418886,0.00009195259,0.000111410154,0.00041332553,0.00027061865],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018202198,0.00034658553,0.9601732,0.00017028718,0.00005375645,0.00037723873,0.0003894735,8.916483e-9,0.0039900593,0.0036848658,0.017437762,0.013194766],"study_design_scores_gemma":[0.0014751625,0.00045522003,0.94072735,0.00008487156,0.00009768215,0.00087956956,0.00025545515,0.000011570008,0.0021370265,0.00025755283,0.05344203,0.0001764933],"about_ca_topic_score_codex":0.000053839958,"about_ca_topic_score_gemma":0.00011997742,"teacher_disagreement_score":0.03600427,"about_ca_system_score_codex":0.000057629044,"about_ca_system_score_gemma":0.0002288494,"threshold_uncertainty_score":0.9945255},"labels":[],"label_agreement":null},{"id":"W1991564592","doi":"10.1053/jinf.2000.0397","title":"Zygomycosis in Relapsed Acute Leukaemia","year":2000,"lang":"en","type":"article","venue":"Journal of Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"Medical Research Council","keywords":"Medicine; Pancytopenia; Mucormycosis; Amphotericin B; Chemotherapy; Zygomycosis; Surgery; Myeloid leukaemia; Internal medicine; Bone marrow; Dermatology; Antifungal","score_opus":0.009602297095060693,"score_gpt":0.2868453000680485,"score_spread":0.27724300297298776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991564592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919795,0.00009148135,0.000083231105,0.00031221862,0.0001267225,0.000059560596,3.7452384e-7,0.0000079135025,0.007338993],"genre_scores_gemma":[0.9976503,0.00062822894,0.00016670211,0.00015681768,0.00014517226,6.4706984e-7,6.6594663e-7,0.000005440579,0.0012460271],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99930006,0.000033824963,0.00033201804,0.00006565415,0.00017088534,0.00009753543],"domain_scores_gemma":[0.99963164,0.000024983063,0.00009995421,0.00008680588,0.000094927316,0.00006170341],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003408614,0.000057541343,0.00019848533,0.000120473924,0.000024458104,0.000007309817,0.00001969865,0.000072492636,0.00091150694],"category_scores_gemma":[0.00007952045,0.000044329896,0.0001312113,0.00020347435,0.000020151105,0.00011541275,0.0000025037077,0.0002928427,0.000044169843],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012407226,0.00022421518,0.95026416,0.00002855291,0.00006168058,0.00015780494,0.00012012389,0.00005395662,0.01341445,0.000015615014,0.0020208503,0.032397892],"study_design_scores_gemma":[0.0013560478,0.00052323804,0.99069333,0.00015149271,0.00007343537,0.0003237439,0.000013900897,0.000047231926,0.0026727214,0.0001480704,0.003951696,0.000045105906],"about_ca_topic_score_codex":0.000046101475,"about_ca_topic_score_gemma":0.00006035374,"teacher_disagreement_score":0.04042918,"about_ca_system_score_codex":0.00018455482,"about_ca_system_score_gemma":0.000083514715,"threshold_uncertainty_score":0.9980362},"labels":[],"label_agreement":null},{"id":"W1992197029","doi":"10.1016/s0167-4889(01)00168-9","title":"Interactions between regulatory and catalytic subunits of the Candida albicans cAMP-dependent protein kinase are modulated by autophosphorylation of the regulatory subunit","year":2002,"lang":"en","type":"article","venue":"Biochimica et Biophysica Acta (BBA) - Molecular Cell Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Consejo Nacional de Investigaciones Científicas y Técnicas","keywords":"Autophosphorylation; Protein subunit; Phosphorylation; Biochemistry; Gi alpha subunit; Protein kinase A; Tetramer; Mutant; Candida albicans; Recombinant DNA; Interleukin 10 receptor, alpha subunit; Biology; Gamma-aminobutyric acid receptor subunit alpha-1; Kinase; Chemistry; Molecular biology; Enzyme; G alpha subunit","score_opus":0.03094496092409038,"score_gpt":0.2853642423428606,"score_spread":0.25441928141877024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992197029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953107,0.00042844596,0.000008996787,0.0019082204,0.000041241565,0.0014285182,0.000159711,0.000022466265,0.0006916521],"genre_scores_gemma":[0.9963414,0.00005637596,0.00002081317,0.000059382506,0.000029639748,0.000035438414,0.000045250974,0.00004939486,0.0033623201],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99642146,0.0006659588,0.00053533,0.0005659158,0.0013528982,0.00045842753],"domain_scores_gemma":[0.9972496,0.00016841778,0.00035039178,0.0014783903,0.0005450761,0.00020809998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006667433,0.0002712412,0.00045457846,0.00016747868,0.00029035987,0.000032696127,0.0004850241,0.00019321482,0.000063347754],"category_scores_gemma":[0.00026550973,0.0001885393,0.00024439598,0.0009883618,0.0010425719,0.00011926421,0.0003307765,0.0008750668,0.000006923697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001311244,0.00036523805,0.0014277062,0.00028800924,0.00010081092,0.000005658397,0.0004269828,0.0000032208552,0.99635816,0.000058139787,0.00058299117,0.00025198655],"study_design_scores_gemma":[0.00054747023,0.00013734939,0.16940422,0.0003057204,0.00010098831,0.0000018368298,0.00022199308,0.00024493498,0.8286812,0.000074197866,0.00013647409,0.00014361844],"about_ca_topic_score_codex":0.0006375748,"about_ca_topic_score_gemma":0.00008631365,"teacher_disagreement_score":0.16797651,"about_ca_system_score_codex":0.00022687856,"about_ca_system_score_gemma":0.00029360456,"threshold_uncertainty_score":0.7688409},"labels":[],"label_agreement":null},{"id":"W1993588701","doi":"10.1139/w10-003","title":"Utility of a Luminex-based assay for multiplexed, rapid species identification of <i>Candida</i> isolates from an ongoing candidemia surveillance","year":2010,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"U.S. Department of Veterans Affairs","keywords":"Biology; Microbiology; Population; Identification (biology); Candida infections; Virology; Candida albicans; Medicine","score_opus":0.015616274044692874,"score_gpt":0.2611974005059165,"score_spread":0.24558112646122363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993588701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964693,0.0005229159,0.0007823235,0.0004376788,0.00041923102,0.00021938057,0.0011025206,0.000003161228,0.00004349144],"genre_scores_gemma":[0.9982814,0.000013299538,0.001212674,0.00013565464,0.00013096519,0.0000013561609,0.0001525877,0.000011671768,0.00006037722],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99858147,0.000100903315,0.00082384335,0.00019414938,0.00004728275,0.00025235506],"domain_scores_gemma":[0.99758613,0.00043050418,0.0006572298,0.00032856758,0.0007180666,0.0002794928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012126119,0.00012474027,0.0005797671,0.00017206252,0.00006371784,0.00000765553,0.00019100489,0.00019994695,0.0002643817],"category_scores_gemma":[0.0013767885,0.00010786968,0.0001933296,0.00010453145,0.00046020985,0.00006280809,0.0000049342293,0.00028199324,9.4413133e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028898576,0.000026575119,0.40748405,0.00004530105,0.000035754725,0.0000031517877,0.0001242891,0.0000014075695,0.59090376,0.000010594471,0.00063260837,0.00044352608],"study_design_scores_gemma":[0.001438387,0.0003060332,0.6609716,0.00007036929,0.000058068712,0.00002839927,0.00024823708,0.00017270734,0.33257338,0.000056162156,0.003976489,0.00010022372],"about_ca_topic_score_codex":0.00746392,"about_ca_topic_score_gemma":0.307854,"teacher_disagreement_score":0.3003901,"about_ca_system_score_codex":0.00004945961,"about_ca_system_score_gemma":0.0016459484,"threshold_uncertainty_score":0.99914545},"labels":[],"label_agreement":null},{"id":"W1993727333","doi":"10.1038/ncomms7741","title":"Global analysis of fungal morphology exposes mechanisms of host cell escape","year":2015,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":243,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Genome Canada","keywords":"Biology; Candida albicans; Virulence; Pyroptosis; Cell biology; Microbiology; Multicellular organism; Corpus albicans; Cryptococcus neoformans; Immune system; Macrophage; Phagosome; Morphogenesis; Filamentation; Cell; Programmed cell death; Phagocytosis; Genetics; Gene; Apoptosis","score_opus":0.03520152267915348,"score_gpt":0.3386322628498982,"score_spread":0.30343074017074473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993727333","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9632493,0.011764336,0.0017648936,0.0013603512,0.000090310125,0.0002486953,0.00026574073,0.000036459995,0.0212199],"genre_scores_gemma":[0.98905843,0.00019725523,0.010234118,0.00019690105,0.000008031114,0.00000550467,0.00014884346,0.000005542073,0.00014537353],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99902594,0.00012641671,0.00032884238,0.00015069939,0.00024832663,0.000119757904],"domain_scores_gemma":[0.9970092,0.0001444068,0.00017605383,0.001967476,0.0006007765,0.000102089194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032850206,0.00009221564,0.00042773367,0.000107443266,0.000043061675,0.0000029895882,0.0004983518,0.0002606974,0.000052405143],"category_scores_gemma":[0.00029564666,0.00008033977,0.00020500908,0.0011758285,0.00022744866,0.000040450323,0.00018366368,0.0003158587,0.0000051919756],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027026146,0.0014459693,0.90680337,0.00005314815,0.00086439267,0.000004767204,0.0003512634,0.000019662682,0.044969544,0.041492987,0.003372136,0.00035249515],"study_design_scores_gemma":[0.00081175804,0.0002954444,0.9798405,0.000025423074,0.0025338088,0.0000059908302,0.0014195284,0.0005825728,0.012205404,0.0010529672,0.0011059776,0.00012059166],"about_ca_topic_score_codex":0.000103394406,"about_ca_topic_score_gemma":0.0012964865,"teacher_disagreement_score":0.07303716,"about_ca_system_score_codex":0.000058846443,"about_ca_system_score_gemma":0.00020777258,"threshold_uncertainty_score":0.32761607},"labels":[],"label_agreement":null},{"id":"W1994067136","doi":"10.1074/jbc.m108095200","title":"Candida albicans Expresses an Unusual Cytoplasmic Manganese-containing Superoxide Dismutase (SOD3 Gene Product) upon the Entry and during the Stationary Phase","year":2001,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":123,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Medical Research Council","keywords":"Candida albicans; Superoxide dismutase; Gene product; Cytoplasm; Chemistry; Manganese; Gene; Microbiology; Phase (matter); Biology; Biochemistry; Enzyme; Gene expression; Organic chemistry","score_opus":0.02254226290751873,"score_gpt":0.2934284954464191,"score_spread":0.2708862325389004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994067136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967754,0.0016414084,0.000020901816,0.0012268041,0.00003275601,0.0001270331,0.000025428802,0.000012885459,0.00013737021],"genre_scores_gemma":[0.9980041,0.0009096334,0.00008020214,0.00018422643,0.00053926796,0.0000047523004,0.000021446864,0.000007994642,0.00024837162],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99882054,0.000083788436,0.00039430097,0.0002211921,0.00024142438,0.00023875387],"domain_scores_gemma":[0.99906266,0.00022613125,0.00018152769,0.00023337794,0.000120851,0.00017546506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046040793,0.00015406194,0.0002732237,0.000014864726,0.00021887069,0.000031650263,0.00016772457,0.00008407938,0.00013947324],"category_scores_gemma":[0.00047782745,0.000070704926,0.00009369501,0.00009248389,0.00025392426,0.00010609991,0.00004571206,0.00045878123,9.2169427e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026258854,0.00027013136,0.13592279,0.000054934557,0.00005532045,0.0005271812,0.00030149915,0.000008116342,0.8593922,0.000002256233,0.000077827666,0.00076186156],"study_design_scores_gemma":[0.0030651144,0.0008063887,0.34900725,0.0001235985,0.00012268369,0.0043550413,0.0050341245,0.000047656933,0.63528895,0.00014252677,0.0017961116,0.00021054842],"about_ca_topic_score_codex":0.000011481915,"about_ca_topic_score_gemma":0.000006502624,"teacher_disagreement_score":0.22410324,"about_ca_system_score_codex":0.00006752919,"about_ca_system_score_gemma":0.00010588397,"threshold_uncertainty_score":0.2883263},"labels":[],"label_agreement":null},{"id":"W1994775902","doi":"10.1371/journal.pgen.1002613","title":"The Functions of Mediator in Candida albicans Support a Role in Shaping Species-Specific Gene Expression","year":2012,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Health and Medical Research Council; Medical Research Council; Australian Research Council; Monash University","keywords":"Biology; Candida albicans; Mediator; Corpus albicans; Virulence; Gene; Schizosaccharomyces pombe; Fungal protein; Bacterial adhesin; Genetics; Microbiology; Schizosaccharomyces; Protein subunit; Saccharomyces cerevisiae; Cell biology","score_opus":0.04470716669308521,"score_gpt":0.2680627232160943,"score_spread":0.2233555565230091,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994775902","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934647,0.0033661001,0.000043592558,0.0001423432,0.00012607935,0.0002719197,0.000017894221,0.000009498853,0.0025578626],"genre_scores_gemma":[0.9979508,0.00093812373,0.00026621713,0.00004068702,0.00019853041,0.000020956151,0.000015938766,0.00001485616,0.00055388955],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987708,0.000051605242,0.0003658448,0.00016115258,0.00031127693,0.00033937],"domain_scores_gemma":[0.9992671,0.000118136726,0.00006845866,0.00036809134,0.00005773521,0.00012045106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030571406,0.00010272147,0.0002237471,0.000075553675,0.000055482942,0.000006273664,0.00009406465,0.00007687548,0.00032734143],"category_scores_gemma":[0.00010445839,0.00007393293,0.0000553383,0.0002214591,0.00011088673,0.00003791809,0.00004432654,0.00018511241,0.000021393205],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009287679,0.00020429824,0.69677067,0.000023080447,0.0000073618935,0.0000029815808,0.00092967437,0.0000047784615,0.30123,0.000016150138,0.000391825,0.00032628703],"study_design_scores_gemma":[0.00059300655,0.0000933159,0.76967204,0.00008031294,0.000021778707,0.000002378552,0.002114703,0.00012941804,0.21708348,0.000027326581,0.010087346,0.00009486995],"about_ca_topic_score_codex":0.000015150694,"about_ca_topic_score_gemma":0.0006026008,"teacher_disagreement_score":0.08414654,"about_ca_system_score_codex":0.00012398056,"about_ca_system_score_gemma":0.00011363012,"threshold_uncertainty_score":0.3584159},"labels":[],"label_agreement":null},{"id":"W1995689582","doi":"10.1186/1471-2253-13-37","title":"Candidemia in the critically ill: initial therapy and outcome in mechanically ventilated patients","year":2013,"lang":"en","type":"article","venue":"BMC Anesthesiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Astellas Pharma; Thomas Jefferson University; University of Arkansas for Medical Sciences; Hamilton Health Sciences; City of Hope; University of Pittsburgh; Johns Hopkins University; University of Minnesota; Bunning Food Allergy Institute, Ann and Robert H. Lurie Children's Hospital of Chicago; University of Miami; University of Nebraska Medical Center; University of Washington; Emory University; Astellas Pharma US; University of Pennsylvania; Massachusetts General Hospital","keywords":"Medicine; Fluconazole; Echinocandin; Anesthesiology; Internal medicine; Hazard ratio; Population; Intensive care medicine; Proportional hazards model; Surgery; Antifungal; Anesthesia; Confidence interval","score_opus":0.04613748696223921,"score_gpt":0.32236361122876744,"score_spread":0.27622612426652826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995689582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978799,0.00014075452,0.0000123858335,0.0010529853,0.000032498694,0.0005927804,9.573869e-7,0.000014134765,0.00027357566],"genre_scores_gemma":[0.9911258,0.000026020029,0.00026502635,0.008456496,0.000024125686,0.00005115325,0.00001138655,0.000008471663,0.000031502637],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986387,0.00028195934,0.00040057334,0.00026191026,0.00012646688,0.00029040096],"domain_scores_gemma":[0.99916375,0.00036374992,0.000038740094,0.00023698818,0.00013254526,0.00006425475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046034914,0.0001234682,0.00034252755,0.00006647603,0.000032299027,0.000010099159,0.00010983227,0.00018701375,0.00014497814],"category_scores_gemma":[0.0010170141,0.00007490905,0.000049670885,0.00012050214,0.00014920103,0.00005184681,0.00001957999,0.00026135394,0.00003368707],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036210712,0.00019053722,0.9960331,0.000022535422,0.0000031258262,0.00004470154,0.00019999534,1.4550375e-7,0.00020457103,0.0004603927,0.000059163853,0.0024196336],"study_design_scores_gemma":[0.0012519363,0.0005131902,0.9962129,0.00002242782,0.000005900242,0.000015391646,0.00023795218,0.00004390525,0.000034652905,0.0013398647,0.00024257664,0.00007928775],"about_ca_topic_score_codex":0.0003498253,"about_ca_topic_score_gemma":0.00045366088,"teacher_disagreement_score":0.00740351,"about_ca_system_score_codex":0.000029266435,"about_ca_system_score_gemma":0.00006187256,"threshold_uncertainty_score":0.30547023},"labels":[],"label_agreement":null},{"id":"W1995777637","doi":"10.1002/yea.762","title":"<i>CaALK8</i>, an alkane assimilating cytochrome P450, confers multidrug resistance when expressed in a hypersensitive strain of <i>Candida albicans</i>","year":2001,"lang":"en","type":"article","venue":"Yeast","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"Indian Institute of Science; Université Catholique de Louvain","keywords":"Biology; Candida albicans; Candida tropicalis; Corpus albicans; Efflux; Gene; Mutant; Fungal protein; Microbiology; Molecular biology; Biochemistry","score_opus":0.02338217696744562,"score_gpt":0.2821969704026785,"score_spread":0.2588147934352329,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995777637","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9751494,0.000118686396,0.00034713626,0.0005253855,0.000033801516,0.00052360963,0.00030748016,0.000058101494,0.022936393],"genre_scores_gemma":[0.99516565,0.000043005206,0.0023299374,0.00043445767,0.00009196941,0.000015820302,0.00008852687,0.00003521251,0.0017954325],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99791646,0.00010797266,0.0005369129,0.0005357966,0.0004518781,0.00045098283],"domain_scores_gemma":[0.9987326,0.00011744554,0.00017520586,0.0005580864,0.0001874172,0.0002292207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004433294,0.0002464558,0.0006216785,0.00012252007,0.00006602388,0.000017621356,0.00012936596,0.00013607323,0.0002833975],"category_scores_gemma":[0.00026996958,0.00023472092,0.00012118312,0.0002743641,0.00028578704,0.00020887748,0.000033013475,0.0003132582,0.000011213639],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018088453,0.00043930532,0.036242966,0.00016703141,0.000049551072,0.00050914485,0.0034836368,0.00002160029,0.95459276,0.00025747408,0.00047555895,0.0019521305],"study_design_scores_gemma":[0.0082217185,0.00051815755,0.93665,0.0015948862,0.00014456618,0.00006220605,0.016882649,0.0011158095,0.02516883,0.0005057986,0.008393306,0.0007420731],"about_ca_topic_score_codex":0.00037136226,"about_ca_topic_score_gemma":0.0030242193,"teacher_disagreement_score":0.9294239,"about_ca_system_score_codex":0.00013615256,"about_ca_system_score_gemma":0.00023157014,"threshold_uncertainty_score":0.9571641},"labels":[],"label_agreement":null},{"id":"W1996285079","doi":"10.1016/j.healun.2008.03.010","title":"Increased Mortality After Pulmonary Fungal Infection Within the First Year After Pediatric Lung Transplantation","year":2008,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Center for Research Resources","keywords":"Medicine; Hazard ratio; Internal medicine; Lung transplantation; Transplantation; Proportional hazards model; Cystic fibrosis; Confidence interval","score_opus":0.011359838970646267,"score_gpt":0.2552525415538938,"score_spread":0.24389270258324755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996285079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968601,0.0013142305,0.0008073462,0.000492143,0.00014336484,0.00028228192,0.000018001594,0.000013284689,0.00006924014],"genre_scores_gemma":[0.99327165,0.0060300143,0.00007031602,0.00025381756,0.00031490228,0.000007999602,0.000012883451,0.000012005233,0.000026427932],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99876386,0.00016750503,0.00042572911,0.00011292682,0.00038715746,0.00014284388],"domain_scores_gemma":[0.9993814,0.00014773733,0.00013994653,0.00013591787,0.000115381954,0.000079593665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084795576,0.0001332285,0.00020805256,0.000087926455,0.0002469643,0.00001522409,0.00004531051,0.00007979221,0.00004702634],"category_scores_gemma":[0.000013980639,0.000075157135,0.00012007064,0.00017190937,0.000110549474,0.00027057898,0.0000030658284,0.00034881796,0.00000391171],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005739147,0.000071840295,0.98976326,0.0004593462,0.000058954716,0.00016795345,0.0027458738,0.00002471747,0.000842219,0.000005510752,0.00010273645,0.000018467816],"study_design_scores_gemma":[0.00086052844,0.00014783087,0.99448764,0.000121920006,0.0013762754,0.0019951663,0.00008253583,0.00027458044,0.0005152368,0.000030405823,0.000023100765,0.000084772975],"about_ca_topic_score_codex":0.0001436915,"about_ca_topic_score_gemma":0.00027985818,"teacher_disagreement_score":0.0048786183,"about_ca_system_score_codex":0.000036090816,"about_ca_system_score_gemma":0.00009496305,"threshold_uncertainty_score":0.3064819},"labels":[],"label_agreement":null},{"id":"W1996364851","doi":"10.1111/j.1574-6968.2000.tb09216.x","title":"<i>Candida glabrata</i>displays pseudohyphal growth","year":2000,"lang":"yi","type":"article","venue":"FEMS Microbiology Letters","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Candida glabrata; Hypha; Saccharomyces cerevisiae; Biology; Yeast; Microbiology; Filamentation; Agar; Ploidy; Ammonium; Biochemistry; Candida albicans; Chemistry; Bacteria; Genetics; Gene","score_opus":0.006448271847796969,"score_gpt":0.22365992521034725,"score_spread":0.21721165336255027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996364851","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9748144,0.003128145,0.000110999485,0.012834701,0.0013951553,0.00066736236,0.0005220582,0.00013138523,0.0063957768],"genre_scores_gemma":[0.95051503,0.0009582472,0.00023914583,0.03416433,0.0012136973,0.000018978015,0.000650659,0.000079403144,0.012160526],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99573374,0.00038122793,0.00087993155,0.001314974,0.00016481527,0.0015252931],"domain_scores_gemma":[0.99812186,0.00022600009,0.00018773679,0.0009965665,0.00010316546,0.00036470042],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005167178,0.0007196388,0.0010909128,0.00015242927,0.00037194858,0.00005706926,0.0005257852,0.0006527925,0.010924844],"category_scores_gemma":[0.0000989296,0.00065047736,0.0004665955,0.00031731406,0.0013545043,0.00018194673,0.00008931318,0.0010784477,0.007856067],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012022884,0.0002885945,0.08252427,0.00017069977,0.00032729172,0.0005411549,0.00052521634,0.0000034801542,0.72895235,0.000076489734,0.18323377,0.002154382],"study_design_scores_gemma":[0.020362493,0.0027345575,0.34217957,0.0018580041,0.002256289,0.0029796555,0.000963524,0.000087918794,0.110073544,0.00019465231,0.51150644,0.0048033474],"about_ca_topic_score_codex":0.00047596655,"about_ca_topic_score_gemma":0.00018777112,"teacher_disagreement_score":0.61887884,"about_ca_system_score_codex":0.00027907666,"about_ca_system_score_gemma":0.00022181631,"threshold_uncertainty_score":0.9995946},"labels":[],"label_agreement":null},{"id":"W1996423140","doi":"10.1016/j.mmcr.2014.07.005","title":"Mucor irregularis-associated cutaneous mucormycosis: Case report and review","year":2014,"lang":"en","type":"article","venue":"Medical Mycology Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre Hospitalier Universitaire de Québec; Université Laval","keywords":"Mucormycosis; Mucor; Medicine; Dermatology; Fungus; Pathology; Intensive care medicine; Microbiology; Biology; Aspergillus; Botany","score_opus":0.011245071509655109,"score_gpt":0.2952055636861914,"score_spread":0.2839604921765363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996423140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9836806,0.0072289193,0.00017092773,0.003972136,0.0005442081,0.00080984813,0.000004413517,0.00018913909,0.0033997893],"genre_scores_gemma":[0.9905931,0.0019812146,0.0002201221,0.005388628,0.0001917989,0.00006473607,0.00006438314,0.000034245168,0.0014618251],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9960148,0.00035725924,0.0014067243,0.00090205,0.0007488235,0.0005703412],"domain_scores_gemma":[0.99649197,0.0005972487,0.00054773554,0.0010308886,0.00032762473,0.0010045209],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0037174758,0.00030891644,0.0011915631,0.00008887529,0.00024318365,0.000012545974,0.000044401706,0.0006091365,0.00140108],"category_scores_gemma":[0.024902636,0.0002445304,0.00021258871,0.00027492052,0.0005179456,0.000056158555,0.0001245838,0.0007217402,0.000020209232],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000445603,0.0002821256,0.0328828,0.00076018926,0.00011316636,0.9447208,0.0000337838,2.4803311e-8,0.00006247042,0.000029065552,0.010954753,0.010116243],"study_design_scores_gemma":[0.00050257676,0.00040930317,0.005020992,0.0011154603,0.0006156592,0.97354627,0.00005881102,0.00011875589,0.000032896827,0.00015822679,0.018196404,0.00022461769],"about_ca_topic_score_codex":0.00040121927,"about_ca_topic_score_gemma":0.0008877471,"teacher_disagreement_score":0.028825475,"about_ca_system_score_codex":0.00016334151,"about_ca_system_score_gemma":0.0005391556,"threshold_uncertainty_score":0.9995118},"labels":[],"label_agreement":null},{"id":"W1996662392","doi":"10.1128/aac.46.11.3522-3531.2002","title":"Action of Chlorhexidine Digluconate against Yeast and Filamentous Forms in an Early-Stage<i>Candida albicans</i>Biofilm","year":2002,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research; McMaster University","keywords":"Microbiology; Biofilm; Candida albicans; Yeast; Chlorhexidine; Biology; Chemistry; Medicine; Bacteria; Biochemistry; Dentistry; Genetics","score_opus":0.030563513645854603,"score_gpt":0.2820595212513544,"score_spread":0.25149600760549984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996662392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99837154,0.00006495144,0.000013093156,0.00049964356,0.000037389535,0.0002873763,0.000034737037,0.000019163364,0.0006720789],"genre_scores_gemma":[0.9915935,0.0042626397,0.00008058402,0.002136525,0.00003928707,0.0000029250366,0.000026863483,0.00002122065,0.0018364998],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990439,0.000016624439,0.00026945397,0.00030658173,0.000124142,0.00023929273],"domain_scores_gemma":[0.99956334,0.0000085583715,0.00009050252,0.00018937906,0.000037544607,0.0001106929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008890804,0.00016880188,0.00033156358,0.00007878148,0.00006224327,0.000027343323,0.0000530576,0.00010014217,0.00029511013],"category_scores_gemma":[0.0000057165,0.00013887818,0.000055524888,0.0001239144,0.00014432966,0.00017975723,0.000017517294,0.00012480014,0.0000029472587],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006586216,0.0005319751,0.63975966,0.00017713528,0.000053719858,0.00002268754,0.0008942317,0.000001092897,0.32558075,0.000022882026,0.0008562489,0.031441018],"study_design_scores_gemma":[0.0039356756,0.00040608094,0.9422644,0.00015007834,0.000022850116,0.000007529554,0.0001762845,0.00036875845,0.04715239,0.000015972011,0.0052897995,0.0002102208],"about_ca_topic_score_codex":0.00022768481,"about_ca_topic_score_gemma":0.00022898751,"teacher_disagreement_score":0.30250472,"about_ca_system_score_codex":0.000029115237,"about_ca_system_score_gemma":0.00001208954,"threshold_uncertainty_score":0.5663288},"labels":[],"label_agreement":null},{"id":"W1997019081","doi":"10.1007/s11046-014-9747-3","title":"Prevalent Drug Resistance Among Oral Yeasts from Asymptomatic Patients in Hainan, China","year":2014,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Fluconazole; Itraconazole; Medical microbiology; Drug resistance; Ketoconazole; Biology; Microbiology; Amphotericin B; Asymptomatic; Drug; Antifungal drug; Antifungal drugs; Parasitology; Antifungal; Medicine; Pharmacology; Internal medicine; Zoology","score_opus":0.006678173636672587,"score_gpt":0.24018601089996217,"score_spread":0.23350783726328958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997019081","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931149,0.00021904866,0.00023449946,0.00015319366,0.00019610385,0.0004960923,0.000018853054,0.00010004477,0.0054672915],"genre_scores_gemma":[0.99392045,0.000025779067,0.0015409904,0.00023678892,0.000057192363,0.00003105008,0.00006409579,0.00002350662,0.0041001607],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979995,0.00026643867,0.000447288,0.00052807166,0.0003713864,0.00038732655],"domain_scores_gemma":[0.99893785,0.000096691176,0.00013181879,0.00065128977,0.00007556762,0.00010681474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006859986,0.0002202567,0.00049377175,0.000083797626,0.000066877314,0.000020954032,0.00017278892,0.00012423054,0.0001290431],"category_scores_gemma":[0.00092918804,0.00018028871,0.00010245968,0.00020648155,0.00015511684,0.00011577525,0.00007358569,0.0002938829,0.00014205147],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022653001,0.00028718926,0.9946681,0.00013015691,0.0000060143693,0.000053282765,0.00043809143,0.0000015857124,0.00032075922,0.00006014409,0.001888747,0.0019193728],"study_design_scores_gemma":[0.0014638668,0.00010076317,0.99627817,0.00042407625,0.00003353543,8.0073966e-7,0.00004216812,0.00015569192,0.00028940474,0.0006453074,0.00038790598,0.00017833352],"about_ca_topic_score_codex":0.00016698804,"about_ca_topic_score_gemma":0.0012367484,"teacher_disagreement_score":0.0017410393,"about_ca_system_score_codex":0.00015364135,"about_ca_system_score_gemma":0.000039465984,"threshold_uncertainty_score":0.73519605},"labels":[],"label_agreement":null},{"id":"W1997751445","doi":"10.1371/journal.ppat.0030024","title":"Essential Gene Identification and Drug Target Prioritization in Aspergillus fumigatus","year":2007,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":242,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Genome Canada","keywords":"Aspergillus fumigatus; Biology; Candida albicans; Aspergillosis; Gene; Antifungal drug; Microbiology; Mutant; Fungal protein; Computational biology; Immunology; Genetics","score_opus":0.010416178659891648,"score_gpt":0.2593257671296465,"score_spread":0.24890958846975486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997751445","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956417,0.00061593315,0.002484512,0.00017096242,0.00009348637,0.00033430388,0.000018935572,0.000042560834,0.0005975907],"genre_scores_gemma":[0.9975009,0.0001832485,0.0014082866,0.00008152607,0.00014827935,0.000005536018,0.000098204895,0.000015576943,0.0005584231],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99885166,0.000033547705,0.00032466394,0.00030542936,0.00025239747,0.0002323076],"domain_scores_gemma":[0.99945426,0.00004026988,0.00006047691,0.00022469544,0.00011013572,0.00011016685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004900057,0.000102460894,0.00018632431,0.00011074396,0.00006309752,0.00001665471,0.000037435286,0.000080491234,0.000049410995],"category_scores_gemma":[0.00020982984,0.00010003431,0.000040572286,0.00022571438,0.00006398751,0.00009020596,0.000021052727,0.00012300268,0.000023384246],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000111029,0.00015876355,0.36675465,0.000072497096,0.000010655122,0.000076317876,0.00039103453,0.0000012710203,0.6311558,0.00013175728,0.000038882517,0.0010973288],"study_design_scores_gemma":[0.00052775233,0.00002740083,0.82652026,0.00004290866,0.000041714407,0.000008734034,0.00024644175,0.00028293638,0.17190461,0.00018258081,0.00011478081,0.00009988707],"about_ca_topic_score_codex":0.000016503947,"about_ca_topic_score_gemma":0.00013982371,"teacher_disagreement_score":0.45976558,"about_ca_system_score_codex":0.00007786806,"about_ca_system_score_gemma":0.00005003993,"threshold_uncertainty_score":0.40792808},"labels":[],"label_agreement":null},{"id":"W1998398742","doi":"10.1517/14740338.2015.983071","title":"Drug safety assessment of oral formulations of ketoconazole","year":2014,"lang":"en","type":"review","venue":"Expert Opinion on Drug Safety","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mediprobe Research (Canada); University of Toronto","funders":"","keywords":"Medicine; Ketoconazole; Drug; Pharmacology; Intensive care medicine; Safety profile; Adverse effect; Dermatology; Antifungal","score_opus":0.052724582042721395,"score_gpt":0.4216115641743533,"score_spread":0.3688869821316319,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998398742","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000015724152,0.9712347,0.0018772084,0.00046775315,0.00086288305,0.0026868647,0.00033738048,0.00006872631,0.022448787],"genre_scores_gemma":[0.0026107454,0.99227387,0.0021139844,0.00012868701,0.00026866415,0.00009121768,0.0010465571,0.000069852395,0.0013964538],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99572843,0.00040740034,0.0020514056,0.0006355954,0.00081507006,0.00036211705],"domain_scores_gemma":[0.9965314,0.0007102478,0.0009755794,0.001291609,0.00028503855,0.00020611235],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012640654,0.0005472639,0.003300716,0.00024250615,0.00012915694,0.000007860159,0.00031993646,0.0003065416,0.00058698363],"category_scores_gemma":[0.0002152879,0.0004088706,0.0012611308,0.0003658202,0.0001950398,0.000090401394,0.00011815472,0.00055797555,0.000035132878],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040849645,0.0009399383,0.0006288102,0.017445024,0.00044251565,0.0000026919113,0.0003960004,0.000009226244,0.000008434905,0.019913634,0.013365294,0.9464399],"study_design_scores_gemma":[0.0010248275,0.00015393534,0.002569082,0.01530191,0.00009317004,0.000004207824,0.00009411793,0.00008590546,0.00001581638,0.000045102945,0.98029226,0.00031964557],"about_ca_topic_score_codex":0.00008731037,"about_ca_topic_score_gemma":0.000026968559,"teacher_disagreement_score":0.966927,"about_ca_system_score_codex":0.00041954467,"about_ca_system_score_gemma":0.0009496817,"threshold_uncertainty_score":0.9998363},"labels":[],"label_agreement":null},{"id":"W1998688570","doi":"10.1016/j.clinthera.2015.03.021","title":"Economic Comparison of an Empirical Versus Diagnostic-Driven Strategy for Treating Invasive Fungal Disease in Immunocompromised Patients","year":2015,"lang":"en","type":"article","venue":"Clinical Therapeutics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; CancerCare Manitoba","funders":"Pfizer","keywords":"Medicine; Caspofungin; Voriconazole; Incidence (geometry); Aspergillosis; Adverse effect; Neutropenia; Cumulative incidence; Amphotericin B; Internal medicine; Intensive care medicine; Immunology; Antifungal; Chemotherapy; Transplantation","score_opus":0.28544044083264086,"score_gpt":0.49307230655877554,"score_spread":0.20763186572613468,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998688570","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99818224,0.00024525955,0.00007766412,0.0001081626,0.0002794166,0.000843989,0.00006665235,0.000019726815,0.00017688672],"genre_scores_gemma":[0.99863446,0.000060315742,0.0008118096,0.00014828304,0.00014564289,0.000027782615,0.00012887586,0.000022059521,0.00002076573],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980521,0.00020046053,0.0009844244,0.00035138687,0.0001660948,0.0002454957],"domain_scores_gemma":[0.995689,0.003137601,0.00023498808,0.00040656116,0.00018848258,0.00034342188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045543342,0.00016033312,0.0006516739,0.000039488335,0.00003405309,0.000013364887,0.00014540221,0.0001580475,0.000014366592],"category_scores_gemma":[0.0016490823,0.00013840977,0.00020752577,0.00006379826,0.00022075132,0.00008421728,0.000034129615,0.00024852966,0.000009140691],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012562496,0.0021880157,0.96708643,0.000050053328,0.000086065,0.000004833971,0.00028244752,0.00030585928,0.00003205381,0.000031491556,0.00004302241,0.01732724],"study_design_scores_gemma":[0.015737658,0.0051790997,0.9617294,0.00007998281,0.0002125316,9.489506e-8,0.00059099,0.015606751,0.0002139282,0.00030362033,0.00019138795,0.00015456483],"about_ca_topic_score_codex":0.000018471888,"about_ca_topic_score_gemma":0.00018883537,"teacher_disagreement_score":0.017172676,"about_ca_system_score_codex":0.00014696988,"about_ca_system_score_gemma":0.000628955,"threshold_uncertainty_score":0.5644187},"labels":[],"label_agreement":null},{"id":"W1998699419","doi":"10.1128/aac.00294-13","title":"Potentiation of Azole Antifungals by 2-Adamantanamine","year":2013,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"National Center for Research Resources; National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; National Institutes of Health; Harvard University","keywords":"Fluconazole; Lanosterol; Ergosterol; Azole; Candida albicans; Miconazole; Corpus albicans; Microbiology; In vivo; Pharmacology; Amphotericin B; Nystatin; Biofilm; Biology; Chemistry; Antibiotics; Antifungal; Biochemistry; Sterol; Bacteria","score_opus":0.0063044775096922235,"score_gpt":0.2357175175366092,"score_spread":0.22941304002691695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998699419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953394,0.00009562011,0.00018766127,0.0030029484,0.000047139398,0.00033236743,0.000020213338,0.00002177295,0.000952859],"genre_scores_gemma":[0.9914444,0.0011619664,0.0002872538,0.0045022205,0.000037928636,0.0000027652845,0.000055207474,0.000014628773,0.0024936497],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991666,0.000014448323,0.00026091436,0.00022345856,0.0001507779,0.0001838073],"domain_scores_gemma":[0.9995151,0.000010824746,0.00009533163,0.00018424446,0.000116823416,0.00007764082],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000073661395,0.00012959643,0.00028287456,0.00003898367,0.000055814988,0.00002116275,0.000053052077,0.000093646726,0.0009531916],"category_scores_gemma":[0.000008993391,0.00010527773,0.000080453785,0.000097313205,0.00009755062,0.00011614543,0.000015143963,0.00007857903,0.000023796296],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009641977,0.0002660896,0.27658045,0.000111466594,0.000068097776,0.0000017800377,0.000103438884,1.1399396e-7,0.5818859,0.000019634692,0.13086428,0.010002342],"study_design_scores_gemma":[0.0017598099,0.00014914793,0.8250994,0.000085066145,0.000040048264,0.00000934742,0.00008155351,0.00009992806,0.16303782,0.000045916895,0.009443715,0.00014824558],"about_ca_topic_score_codex":0.00020952828,"about_ca_topic_score_gemma":0.000005134672,"teacher_disagreement_score":0.54851896,"about_ca_system_score_codex":0.000013110692,"about_ca_system_score_gemma":0.000020496203,"threshold_uncertainty_score":0.99996006},"labels":[],"label_agreement":null},{"id":"W1998776564","doi":"10.1016/j.ccm.2009.03.002","title":"Unique Characteristics of Fungal Infections in Lung Transplant Recipients","year":2009,"lang":"en","type":"review","venue":"Clinics in Chest Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Medicine; Intensive care medicine; Epidemiology; Antifungal; Lung; Lung transplantation; Immunology; Pathology; Dermatology; Internal medicine","score_opus":0.08224233752499194,"score_gpt":0.4246656080863935,"score_spread":0.34242327056140154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998776564","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009736841,0.9856761,0.000060226517,0.00016520103,0.0007721935,0.0013767492,0.000084551255,0.000033144377,0.002094994],"genre_scores_gemma":[0.032833695,0.9656252,0.000083933366,0.000128361,0.00040030578,0.00003893838,0.000431245,0.00004451465,0.00041380414],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99551255,0.0002702972,0.0028111103,0.000597007,0.0004139846,0.00039503866],"domain_scores_gemma":[0.9970163,0.0011997883,0.00067488104,0.0007670315,0.00014456263,0.0001974022],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0021536807,0.00046834696,0.0040689,0.00064141443,0.000027012651,0.000003358717,0.00023037799,0.0008260414,0.00011428424],"category_scores_gemma":[0.0019961363,0.00035816885,0.00038426218,0.0010169913,0.00032426344,0.000045412206,0.000028400778,0.0019155034,0.000011348607],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016439315,0.0011276683,0.29666445,0.03057578,0.000086526146,0.0004545858,0.00037339522,1.2697915e-7,0.000001741731,0.00014285752,0.0002418839,0.6701666],"study_design_scores_gemma":[0.0030682434,0.0014843411,0.30681184,0.24537429,0.001962532,0.00016450231,0.00005779827,0.000031647916,0.0000012265596,0.00015275266,0.4403388,0.00055202824],"about_ca_topic_score_codex":0.000048665588,"about_ca_topic_score_gemma":0.00020429175,"teacher_disagreement_score":0.66961455,"about_ca_system_score_codex":0.0004035434,"about_ca_system_score_gemma":0.00081917696,"threshold_uncertainty_score":0.99988705},"labels":[],"label_agreement":null},{"id":"W1999886838","doi":"10.1080/13693780701386007","title":"<i>Lecythophora mutabilis</i>prosthetic valve endocarditis in a diabetic patient","year":2007,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, San Francisco; Astellas Pharma; University of Alberta","keywords":"Voriconazole; Endocarditis; Amphotericin B; Medicine; Microbiology; Internal medicine; Biology; Antifungal; Dermatology","score_opus":0.00652003328512039,"score_gpt":0.2765844858432612,"score_spread":0.27006445255814077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999886838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98910075,0.0008234358,0.00030469953,0.0013635724,0.0004538207,0.0005355951,0.000004284774,0.000055513363,0.0073583117],"genre_scores_gemma":[0.99580586,0.00011045076,0.00022472278,0.0035489283,0.0001498943,0.000041179544,0.000015035861,0.00001974806,0.00008416287],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974064,0.00015409356,0.0006001027,0.00045172006,0.0006734262,0.00071424374],"domain_scores_gemma":[0.9983271,0.00065551116,0.00006231722,0.00037209416,0.00008294565,0.00050006405],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012352814,0.00017467227,0.00057827926,0.00015916587,0.00004511864,0.0000048451666,0.00012003429,0.00035559788,0.0019154247],"category_scores_gemma":[0.0026752548,0.00014354153,0.00021086255,0.00038137406,0.00046999787,0.00002952478,0.000076702876,0.0006293458,0.0001691908],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080013636,0.0015046131,0.8361573,0.00022881698,0.000074905874,0.006841413,0.0012244426,9.375987e-7,0.0054090177,0.00072394754,0.0028535817,0.14418085],"study_design_scores_gemma":[0.0025034815,0.0014215279,0.97407186,0.00015840943,0.00006023114,0.00036593812,0.00046080854,0.000045471006,0.002428631,0.0010534133,0.017227238,0.00020297749],"about_ca_topic_score_codex":0.00007996989,"about_ca_topic_score_gemma":0.00037746195,"teacher_disagreement_score":0.14397787,"about_ca_system_score_codex":0.0002096883,"about_ca_system_score_gemma":0.00030729792,"threshold_uncertainty_score":0.998997},"labels":[],"label_agreement":null},{"id":"W2000724121","doi":"10.1097/00003246-200203000-00008","title":"Significance of Candida recovered from intraoperative specimens in patients with intra-abdominal perforations","year":2002,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":200,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kellogg's (Canada)","funders":"","keywords":"Medicine; Fluconazole; Perforation; Surgery; Mechanical ventilation; Randomized controlled trial; Placebo; Anesthesia; Antifungal","score_opus":0.019117031191472348,"score_gpt":0.27732064548250485,"score_spread":0.2582036142910325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000724121","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911993,0.0006370279,0.000267229,0.0022101293,0.00010568767,0.0004372648,0.00015852727,0.000013397776,0.0049714223],"genre_scores_gemma":[0.9985118,0.000021353902,0.00066745706,0.0003510626,0.00016750595,0.00001579624,0.00015262698,0.000013328115,0.00009905765],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998552,0.000051291154,0.00039858898,0.00032985568,0.00042922562,0.00023901847],"domain_scores_gemma":[0.9986153,0.00033028203,0.000038141392,0.0002938094,0.00054309744,0.00017931555],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009210071,0.00015940952,0.00050982204,0.00007736688,0.00005132128,0.0000051206302,0.000066169276,0.00007993205,0.0030246463],"category_scores_gemma":[0.0011156409,0.00010908642,0.00003695322,0.000257133,0.00069744675,0.00008668314,0.000012456102,0.00028852109,0.000013808804],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014990983,0.00048321765,0.9811501,0.00025962785,0.000034484267,0.00007542847,0.0050647287,0.0000021455814,0.004224919,0.0006810402,0.0011234008,0.005401839],"study_design_scores_gemma":[0.007122863,0.0045007877,0.9702034,0.0010290345,0.0002606661,0.0000019967808,0.012192234,0.00021324209,0.0036493791,0.00021978657,0.00035391652,0.0002527191],"about_ca_topic_score_codex":0.00029068,"about_ca_topic_score_gemma":0.00068376365,"teacher_disagreement_score":0.010946696,"about_ca_system_score_codex":0.0001696308,"about_ca_system_score_gemma":0.000073151095,"threshold_uncertainty_score":0.9978867},"labels":[],"label_agreement":null},{"id":"W2000930832","doi":"10.1016/j.bmc.2008.12.009","title":"Isolation, structure and biological activity of phomafungin, a cyclic lipodepsipeptide from a widespread tropical Phoma sp.","year":2008,"lang":"en","type":"article","venue":"Bioorganic & Medicinal Chemistry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Merck Canada Inc. (Canada)","funders":"","keywords":"Phoma; Aspergillus fumigatus; Candida albicans; Chemistry; Fungi imperfecti; Stereochemistry; Trichophyton; Microbiology; Toxicity; Antifungal; Biological activity; Aspergillus; Fungus; Biochemistry; Biology; In vitro; Botany; Organic chemistry","score_opus":0.02099567120928451,"score_gpt":0.24864142154880095,"score_spread":0.22764575033951645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000930832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969955,0.0016315298,0.00036387885,0.00039397102,0.000065251625,0.0001667156,0.00007894816,0.00006418521,0.00024000574],"genre_scores_gemma":[0.998193,0.00034967752,0.0006476296,0.00016743895,0.00040221243,0.0000029644439,0.000059427264,0.000019159457,0.00015846678],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983522,0.000041357034,0.00038242026,0.00052920455,0.0004021849,0.00029263235],"domain_scores_gemma":[0.9987787,0.00021042148,0.00015977814,0.0004373313,0.00011719818,0.00029656148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008369743,0.0002663792,0.0006410526,0.000026484768,0.00009675308,0.0000050102567,0.0001277314,0.00036539938,0.0009061427],"category_scores_gemma":[0.00073146867,0.0002002094,0.00011309444,0.00020149894,0.0006452516,0.000059760125,0.000067490466,0.00044474768,0.00000596568],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005450209,0.00010056786,0.39381918,0.00007960738,0.000045908993,0.00005970377,0.00013573277,1.7613704e-8,0.6044513,0.0000019304457,0.00026422206,0.000496778],"study_design_scores_gemma":[0.0009485448,0.000121477344,0.56858635,0.00010219447,0.00006506288,0.00017483193,0.000099742676,0.00002319044,0.42960024,0.00006383114,0.00010691701,0.00010761898],"about_ca_topic_score_codex":0.00012413735,"about_ca_topic_score_gemma":0.0000143717925,"teacher_disagreement_score":0.17485109,"about_ca_system_score_codex":0.00008799113,"about_ca_system_score_gemma":0.00022534217,"threshold_uncertainty_score":0.9921627},"labels":[],"label_agreement":null},{"id":"W2001043328","doi":"10.1139/w04-095","title":"Deletion of the <i>Candida</i> <i>albicans</i> G-protein-coupled receptor, encoded by <i>orf19.1944</i> and its allele <i>orf19.9499</i> , produces mutants defective in filamentous growth","year":2004,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Burroughs Wellcome Fund","keywords":"Filamentation; Mutant; Candida albicans; Biology; Gene; Saccharomyces cerevisiae; Corpus albicans; Germ tube; Fungal protein; Gene product; Genetics; Molecular biology; Gene expression","score_opus":0.005763564660214692,"score_gpt":0.20235181537103833,"score_spread":0.19658825071082364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001043328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908297,0.0054571633,0.0000294439,0.0024233793,0.00020986644,0.0006413405,0.00017141488,0.000005159614,0.00023251229],"genre_scores_gemma":[0.99812186,0.0003382078,0.00013021068,0.0011089996,0.00007491394,0.0000073349993,0.000023873888,0.000023022352,0.00017157168],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981017,0.00018836821,0.00071761163,0.00034644612,0.00012518148,0.00052070577],"domain_scores_gemma":[0.998448,0.000061095525,0.00045441178,0.00023558976,0.00043658164,0.00036433112],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006257258,0.00024605126,0.00065380364,0.00018570377,0.00012825489,0.000014379748,0.0002631273,0.0002402001,0.00009340584],"category_scores_gemma":[0.00047447928,0.00018132791,0.0001634771,0.00037688852,0.0004270107,0.00011362549,0.000027175012,0.00054811826,0.0000050758263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003797944,0.00009569272,0.018698025,0.00008670009,0.000075713666,0.000054045668,0.0006535213,0.0000071476516,0.97729474,0.00009976605,0.0023952438,0.00015960955],"study_design_scores_gemma":[0.00658102,0.0015981329,0.0133912405,0.00090806483,0.0001591349,0.0010250508,0.00086298713,0.0000034004538,0.96530074,0.0006945418,0.009052472,0.0004232111],"about_ca_topic_score_codex":0.0047805556,"about_ca_topic_score_gemma":0.045857463,"teacher_disagreement_score":0.041076906,"about_ca_system_score_codex":0.00041812033,"about_ca_system_score_gemma":0.001891222,"threshold_uncertainty_score":0.97155315},"labels":[],"label_agreement":null},{"id":"W2001132015","doi":"10.2165/00128071-200203020-00001","title":"Six Novel Antimycotics","year":2002,"lang":"en","type":"review","venue":"American Journal of Clinical Dermatology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Columbia College","funders":"","keywords":"Medicine; Dermatology; Tinea capitis; Bifonazole; Voriconazole; Antifungal; Seborrheic dermatitis; Pharmacology; Tinea versicolor; Clinical trial; Drug; Pathology","score_opus":0.16305742141623916,"score_gpt":0.4834526691126559,"score_spread":0.3203952476964167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001132015","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005908758,0.99572587,0.0006135024,0.0006928761,0.00088996824,0.00023579023,0.000015583824,0.000016473392,0.001219031],"genre_scores_gemma":[0.0035592588,0.990878,0.0036488995,0.00088667654,0.0006959466,0.0000014717904,0.000008383521,0.000054243792,0.00026711333],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99338925,0.00059000193,0.004765178,0.00037505737,0.00044768868,0.00043284416],"domain_scores_gemma":[0.9914217,0.002965347,0.0040057297,0.00060864195,0.00044022992,0.00055836845],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00089734484,0.00041103738,0.008910219,0.00024858344,0.000041878022,0.000013344211,0.0004220831,0.00049314735,0.00020162074],"category_scores_gemma":[0.0034213092,0.00027554453,0.0028905103,0.00046533358,0.0014101389,0.000060893864,0.00007148773,0.0023023174,0.00020717233],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011987035,0.00063004147,0.0049091834,0.0028614127,0.0007052579,0.0013821376,0.0000093354565,6.3507315e-8,1.2873613e-7,0.00009214995,0.0045101284,0.9847803],"study_design_scores_gemma":[0.00075937173,0.0010746103,0.00096886896,0.005250435,0.0025784792,0.015987031,0.000034562654,0.000007162468,1.7699638e-7,0.000011003995,0.97310865,0.00021965776],"about_ca_topic_score_codex":0.0000029465639,"about_ca_topic_score_gemma":0.0000020099712,"teacher_disagreement_score":0.9845606,"about_ca_system_score_codex":0.000053653166,"about_ca_system_score_gemma":0.0010134581,"threshold_uncertainty_score":0.9999994},"labels":[],"label_agreement":null},{"id":"W2001527892","doi":"10.1503/cmaj.101947","title":"Candida parapsilosis in the blood smear of an injection drug user","year":2011,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Candida parapsilosis; Malaise; Heroin; Medicine; Intravenous drug; Drug; Emergency department; Hepatitis; Human immunodeficiency virus (HIV); Emergency medicine; Surgery; Internal medicine; Pharmacology; Antifungal; Viral disease; Immunology; Dermatology; Psychiatry","score_opus":0.01305553549415163,"score_gpt":0.24423709845524413,"score_spread":0.2311815629610925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001527892","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926154,0.000073549956,0.000008018237,0.0031186535,0.0001615071,0.000098217664,0.000007099834,0.0000042258257,0.0039133285],"genre_scores_gemma":[0.9963575,0.000056555753,0.000074192496,0.0028875065,0.0003104583,0.0000027494534,0.000004098708,0.0000059916974,0.0003009571],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99817234,0.0002555468,0.000351576,0.000101861275,0.00086176186,0.00025692722],"domain_scores_gemma":[0.9988852,0.00007560728,0.00013978657,0.00012543016,0.00021169841,0.0005622523],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0024415914,0.00006847257,0.00018108143,0.00013306418,0.00010085671,0.000014145423,0.00013648036,0.00017505224,0.001688285],"category_scores_gemma":[0.0010401398,0.000047861875,0.00007606019,0.0002552677,0.000045490717,0.00010647847,0.0000036344038,0.00066914124,0.000012735672],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003819504,0.0001338193,0.988188,0.000009384458,0.00004716047,0.0002194519,0.0029054403,2.1939653e-7,0.000024188066,0.00016280888,0.005461391,0.002809896],"study_design_scores_gemma":[0.0008599984,0.0001696029,0.9911057,0.00006217861,0.000059295522,0.00017726967,0.0025759642,0.00002431184,0.00011812774,0.000232545,0.0045561576,0.00005885159],"about_ca_topic_score_codex":0.028405836,"about_ca_topic_score_gemma":0.32785252,"teacher_disagreement_score":0.29944667,"about_ca_system_score_codex":0.00028064588,"about_ca_system_score_gemma":0.001520366,"threshold_uncertainty_score":0.9992243},"labels":[],"label_agreement":null},{"id":"W2001652771","doi":"10.1038/nrg948","title":"Candida albicans: A molecular revolution built on lessons from budding yeast","year":2002,"lang":"en","type":"review","venue":"Nature Reviews Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":572,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Research Council Canada; National Institutes of Health; Wellcome Trust","keywords":"Candida albicans; Biology; Corpus albicans; Virulence; Genome; Whole genome sequencing; Microbiology; Pathogen; Budding yeast; Fungal pathogen; DNA microarray; Genetics; Yeast; Saccharomyces cerevisiae; Computational biology; Gene; Gene expression","score_opus":0.08122800958880916,"score_gpt":0.40599387162370804,"score_spread":0.3247658620348989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001652771","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00002035,0.99369276,0.00018483351,0.00016370887,0.0005596397,0.0023336734,0.0003073005,0.000053271695,0.002684455],"genre_scores_gemma":[0.00014206007,0.99432725,0.0018460761,0.00063002564,0.0007451912,0.00011425588,0.0005628376,0.00012004712,0.0015122478],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99602616,0.0004560685,0.0012124868,0.0011058017,0.00067728886,0.00052221544],"domain_scores_gemma":[0.99700093,0.00012992592,0.000642017,0.0017596442,0.00015105706,0.00031642106],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0004678395,0.0008208211,0.003663498,0.00018699926,0.000105234634,0.0000362138,0.00039860402,0.0016950661,0.00043344387],"category_scores_gemma":[0.00077329756,0.0005993021,0.0014951678,0.0006588338,0.00010690535,0.000024996027,0.0000863672,0.0026513934,0.00052368536],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011511345,0.000104007275,0.000023915025,0.014434959,0.0001616369,0.00008610732,0.00001472844,1.8802994e-7,0.000025907313,0.00010757696,0.011408543,0.9736209],"study_design_scores_gemma":[0.00020561929,0.00011054918,0.00006380143,0.057955038,0.0028094465,0.000029002062,0.0000040221994,0.0000061469495,0.000007581864,0.000039523264,0.9383095,0.00045975918],"about_ca_topic_score_codex":0.000025340407,"about_ca_topic_score_gemma":0.00006677419,"teacher_disagreement_score":0.97316116,"about_ca_system_score_codex":0.00054092024,"about_ca_system_score_gemma":0.00034676446,"threshold_uncertainty_score":0.9996495},"labels":[],"label_agreement":null},{"id":"W2002005828","doi":"10.1111/j.1567-1364.2009.00563.x","title":"Widespread occurrence of chromosomal aneuploidy following the routine production of<i>Candida albicans</i>mutants","year":2009,"lang":"en","type":"article","venue":"FEMS Yeast Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Biology; Aneuploidy; Candida albicans; Genetics; Chromosome; Mutant; Corpus albicans; Multiplex; Molecular biology; Gene","score_opus":0.059864545269241634,"score_gpt":0.37778529462250177,"score_spread":0.31792074935326015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002005828","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950802,0.0005246605,0.000017359536,0.0012824567,0.00017765317,0.00058147835,0.000022217457,0.00002068549,0.0022933201],"genre_scores_gemma":[0.9985613,0.000060748986,0.00006110846,0.000027006108,0.00016117624,0.000009289437,0.000014957539,0.000007792081,0.0010966181],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975361,0.00014580744,0.00036487862,0.00036534085,0.0011598429,0.00042802913],"domain_scores_gemma":[0.99854046,0.00015136975,0.00008396065,0.000689408,0.00042412142,0.00011069085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019556386,0.000118390424,0.00033477432,0.000119595046,0.00014681388,0.00001251949,0.00024185264,0.00007293349,0.00009485833],"category_scores_gemma":[0.0016039097,0.00007899705,0.00014336673,0.00084755564,0.00037455282,0.00010612466,0.000052454074,0.00046974965,0.000018056411],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012090123,0.0006250129,0.28154865,0.00024174605,0.00007325083,0.000050002294,0.001060596,0.0000052117084,0.6822261,0.00028443758,0.0023746714,0.030301258],"study_design_scores_gemma":[0.00089043623,0.0010755155,0.80448353,0.00064850796,0.000053156255,0.000035122866,0.00095357455,0.00008675029,0.1902572,0.00031901055,0.0010627493,0.00013443247],"about_ca_topic_score_codex":0.00018110537,"about_ca_topic_score_gemma":0.00005706758,"teacher_disagreement_score":0.52293485,"about_ca_system_score_codex":0.00007212862,"about_ca_system_score_gemma":0.0003401788,"threshold_uncertainty_score":0.3221406},"labels":[],"label_agreement":null},{"id":"W2002188757","doi":"10.1111/j.1600-0463.2006.apm_394.x","title":"Interspecies variation in <i>Candida</i> biofilm formation studied using the Calgary biofilm device","year":2006,"lang":"en","type":"article","venue":"Apmis","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biofilm; Candida albicans; Microbiology; Corpus albicans; Candida krusei; Chemistry; Candida glabrata; Candida dubliniensis; Biology; Bacteria","score_opus":0.026273283121949285,"score_gpt":0.28331394813628047,"score_spread":0.2570406650143312,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002188757","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98915696,0.0004918479,0.0031760556,0.00087535876,0.000089712186,0.00031392035,0.000004006183,0.00003203595,0.0058600726],"genre_scores_gemma":[0.99832875,0.000041595657,0.0006504377,0.000491255,0.00010563251,0.000007877794,0.00001841921,0.000008099242,0.00034793894],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99914986,0.000051006384,0.000272661,0.00015821068,0.00018930672,0.00017896318],"domain_scores_gemma":[0.999532,0.00007141549,0.000077214725,0.0002158417,0.00007931194,0.000024228142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029478065,0.00009801872,0.00016234395,0.000065906024,0.00010239353,0.000021922087,0.00006135263,0.000050812025,0.00004304247],"category_scores_gemma":[0.00007635675,0.000066487264,0.000055528588,0.00029396778,0.00006148159,0.00015509778,0.000026604745,0.00012777839,0.00001748782],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009568525,0.00070112094,0.4727873,0.00041895753,0.00010521216,0.00008000929,0.007583712,0.00008922599,0.49706507,0.0051880963,0.008631572,0.0063928915],"study_design_scores_gemma":[0.0013868859,0.00009441515,0.9739295,0.00017200729,0.0000958068,0.000019513876,0.002449585,0.0055314167,0.012329427,0.0004826086,0.0033257983,0.00018300136],"about_ca_topic_score_codex":0.0017340875,"about_ca_topic_score_gemma":0.0017129243,"teacher_disagreement_score":0.50114226,"about_ca_system_score_codex":0.00019825816,"about_ca_system_score_gemma":0.000048078113,"threshold_uncertainty_score":0.2711272},"labels":[],"label_agreement":null},{"id":"W2002605200","doi":"10.1016/j.ijid.2011.09.016","title":"Ten-year experience with fungal peritonitis in peritoneal dialysis patients: antifungal susceptibility patterns in a North-American center","year":2011,"lang":"en","type":"review","venue":"International Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Peritoneal dialysis; Antifungal; Peritonitis; Center (category theory); Medicine; Internal medicine; Dermatology; Chemistry","score_opus":0.016023306185163032,"score_gpt":0.3086531270399291,"score_spread":0.2926298208547661,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002605200","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87837553,0.11982846,0.000018517498,0.000012627617,0.00048109924,0.00052093045,0.00055866677,0.00002120558,0.00018295344],"genre_scores_gemma":[0.59067535,0.4088121,0.000020902837,0.000040603525,0.00025696133,0.000032491593,0.0001148366,0.00003538602,0.0000113817705],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9960766,0.0003190386,0.0016146072,0.00058456114,0.00097327295,0.00043194165],"domain_scores_gemma":[0.9969313,0.00017478057,0.0011388925,0.00039477117,0.0010301148,0.00033012987],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021069434,0.0005345623,0.0020588709,0.0009842693,0.000047172485,0.00008887306,0.0004845153,0.00012894401,0.00031758344],"category_scores_gemma":[0.000504673,0.0003951601,0.0008726917,0.00067623827,0.00037897285,0.00040884476,0.0001126588,0.0008724106,0.000013209036],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007357137,0.0026053658,0.86227727,0.00093489815,0.00035015194,0.0009441938,0.000371935,0.0000010930651,1.781063e-7,0.00000321593,0.00001800644,0.13175799],"study_design_scores_gemma":[0.0021266185,0.00092483993,0.9841044,0.0055504637,0.00042661148,0.00028917048,0.00031768894,0.0000014451826,8.300193e-7,0.0000027682577,0.0058891084,0.00036604385],"about_ca_topic_score_codex":0.000689323,"about_ca_topic_score_gemma":0.008244039,"teacher_disagreement_score":0.28898364,"about_ca_system_score_codex":0.0011584723,"about_ca_system_score_gemma":0.00076467014,"threshold_uncertainty_score":0.99985003},"labels":[],"label_agreement":null},{"id":"W2002819739","doi":"10.3109/01676830.2011.603596","title":"Orbital<i>Apergillosis</i>Treated with Retrobulbar Amphotericin B","year":2011,"lang":"en","type":"article","venue":"Orbit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Medicine; Amphotericin B; Debridement (dental); Surgery; Mucormycosis; Aspergillosis; Aspergillus fumigatus; Orbit (dynamics); Maxillary sinus; Soft tissue; Biopsy; Antifungal; Radiology; Dermatology","score_opus":0.026848775285816636,"score_gpt":0.2303642114802441,"score_spread":0.20351543619442747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002819739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90101767,0.0001233369,0.00011931947,0.00008767193,0.00003317117,0.00021835939,0.000006242304,0.00012768096,0.09826656],"genre_scores_gemma":[0.9901348,0.000032741922,0.0019762388,0.00045955516,0.000050283204,0.000012261996,0.000019174411,0.000032686024,0.0072822985],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988385,0.000024620675,0.00021409428,0.00035432706,0.0002548528,0.00031359654],"domain_scores_gemma":[0.99910295,0.000016970389,0.0000585301,0.0005197021,0.00012271877,0.00017910473],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011756297,0.0001844276,0.0003291179,0.000057772948,0.00007318306,0.000009610937,0.00008807504,0.00009598346,0.0018162119],"category_scores_gemma":[0.000044885168,0.00012492364,0.00008627437,0.00028117996,0.000160859,0.00009393035,0.000024177076,0.00017639424,0.00033251662],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017657526,0.00033457257,0.968169,0.00009444747,0.000101179176,0.00066337304,0.0003467385,1.3668854e-7,0.02540465,0.00032542288,0.0019568412,0.0008379184],"study_design_scores_gemma":[0.0012123949,0.0011762533,0.9543924,0.00017420742,0.00016207877,0.0001351014,0.00022436141,0.000014411788,0.03907293,0.00006522074,0.0031136717,0.00025699948],"about_ca_topic_score_codex":0.0003348326,"about_ca_topic_score_gemma":0.00009258918,"teacher_disagreement_score":0.09098426,"about_ca_system_score_codex":0.00006604861,"about_ca_system_score_gemma":0.00006575086,"threshold_uncertainty_score":0.9990963},"labels":[],"label_agreement":null},{"id":"W2002979500","doi":"10.1074/jbc.m109.019877","title":"Chemical Genetic Profiling and Characterization of Small-molecule Compounds That Affect the Biosynthesis of Unsaturated Fatty Acids in Candida albicans","year":2009,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Merck Canada Inc. (Canada)","funders":"","keywords":"Candida albicans; Fatty acid; Biochemistry; Biology; Virulence; Unsaturated fatty acid; Fatty acid desaturase; Corpus albicans; Gene; Microbiology; Polyunsaturated fatty acid","score_opus":0.02518396215081241,"score_gpt":0.2595004932710544,"score_spread":0.23431653112024198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002979500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991661,0.00024013438,0.0000664262,0.00030750904,0.000009559646,0.000094140065,0.000007681898,0.0000034174868,0.000105041145],"genre_scores_gemma":[0.9993364,0.00022321164,0.00031510295,0.00006279569,0.000041297008,6.373651e-7,0.000010284733,0.0000030424746,0.000007192033],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999157,0.000047878493,0.00040941467,0.00012147908,0.00013989049,0.00012431291],"domain_scores_gemma":[0.9992887,0.00011469643,0.0003082131,0.000116310104,0.00010647815,0.00006561695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002763625,0.00010409329,0.00040191167,0.000020682277,0.000016519763,0.000005442383,0.00010020413,0.00015888733,0.000021642049],"category_scores_gemma":[0.00026465202,0.000056510085,0.0001010302,0.00013612353,0.00019653139,0.000018733492,0.000016514861,0.00024358991,6.6481235e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042841941,0.00009558634,0.3034178,0.000060580755,0.000015665666,0.00001164058,0.000023398261,2.0846097e-7,0.6955001,9.541064e-7,7.9313224e-7,0.00044485737],"study_design_scores_gemma":[0.00025940928,0.000111411195,0.44998848,0.000099598525,0.00002044132,0.000035277717,0.000052762032,0.00002439761,0.5493652,0.000010125871,0.0000015448148,0.000031356456],"about_ca_topic_score_codex":0.0000027694743,"about_ca_topic_score_gemma":5.5548753e-7,"teacher_disagreement_score":0.14657067,"about_ca_system_score_codex":0.000035867208,"about_ca_system_score_gemma":0.00006260197,"threshold_uncertainty_score":0.23044144},"labels":[],"label_agreement":null},{"id":"W2003661565","doi":"10.1056/nejmoa021585","title":"Comparison of Caspofungin and Amphotericin B for Invasive Candidiasis","year":2002,"lang":"en","type":"article","venue":"New England Journal of Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1383,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Caspofungin; Neutropenia; Amphotericin B; Medicine; Internal medicine; Confidence interval; Mycosis; Echinocandin; Gastroenterology; Surgery; Antifungal; Chemotherapy; Fluconazole; Dermatology","score_opus":0.07010062899485899,"score_gpt":0.34758404280392846,"score_spread":0.2774834138090695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003661565","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9864526,0.0075593307,0.001082548,0.004054207,0.00018956786,0.00018735742,0.000004237963,0.000003851046,0.00046630687],"genre_scores_gemma":[0.9963343,0.0010605713,0.00096087274,0.0002657966,0.000941687,7.051378e-7,0.0000024542976,0.000009424539,0.00042417692],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99881756,0.0000359266,0.00059673114,0.000104016835,0.00029983054,0.0001459132],"domain_scores_gemma":[0.9985018,0.0005204662,0.0003419863,0.00012403412,0.00025695233,0.00025476608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005104985,0.00011090919,0.00074872375,0.00013362219,0.00003154386,0.000003510177,0.000057105066,0.00005673488,0.0002193304],"category_scores_gemma":[0.0011299821,0.00007005669,0.000077168785,0.000116392526,0.0001392201,0.00006148896,0.000008478428,0.00017546542,7.259667e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003522703,0.00026260834,0.68645513,0.00062622735,0.00024830038,0.00013242125,0.00902931,0.000007347606,0.057540953,0.00012062865,0.04283633,0.19921805],"study_design_scores_gemma":[0.20511767,0.029774722,0.6330494,0.004593584,0.00249439,0.0025252206,0.010671727,0.0012912934,0.043790087,0.0011652487,0.06502229,0.00050432904],"about_ca_topic_score_codex":0.000109139495,"about_ca_topic_score_gemma":0.00016765136,"teacher_disagreement_score":0.20159498,"about_ca_system_score_codex":0.00003426615,"about_ca_system_score_gemma":0.0000793215,"threshold_uncertainty_score":0.2856829},"labels":[],"label_agreement":null},{"id":"W2004437617","doi":"10.2310/7070.2005.04023","title":"Early Identification of Rhinocerebral Mucormycosis","year":2005,"lang":"en","type":"article","venue":"The Journal of Otolaryngology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Medicine; Mucormycosis; Diabetic ketoacidosis; Surgery; Diabetes mellitus; Sinusitis; Intensive care medicine; Dermatology; Pediatrics","score_opus":0.01361909590743853,"score_gpt":0.2759084353291695,"score_spread":0.26228933942173094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004437617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99580914,0.0005718159,0.0007622715,0.0020939899,0.00009445403,0.00010049276,0.0000014152245,0.000004610326,0.0005618246],"genre_scores_gemma":[0.9986354,0.00016233002,0.000341509,0.00026312395,0.00017856732,4.613983e-7,6.9740724e-7,0.000006640279,0.00041125115],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998897,0.00011331147,0.0005955872,0.000058571517,0.00021220336,0.00012332313],"domain_scores_gemma":[0.99885654,0.00011310612,0.00045757816,0.00023855579,0.00027740098,0.000056843528],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009910594,0.000065702035,0.00027720194,0.00008172748,0.00004003441,0.0000035796863,0.00016586012,0.000067041445,0.00018582778],"category_scores_gemma":[0.00021104398,0.00003948648,0.00013138592,0.00011258815,0.00014882388,0.00012801334,0.000019288103,0.00024963263,0.000038380167],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016658001,0.00029566998,0.6499016,0.00006585535,0.00016729374,0.000015604874,0.0013503473,0.000012391993,0.33943892,0.00061499566,0.0012711324,0.0052003507],"study_design_scores_gemma":[0.00060029444,0.0004085135,0.9676559,0.000027172957,0.0001554656,0.00035161423,0.000110690744,0.00006219373,0.029852945,0.00022468789,0.00051668397,0.000033844346],"about_ca_topic_score_codex":0.000018185092,"about_ca_topic_score_gemma":0.00001469576,"teacher_disagreement_score":0.31775427,"about_ca_system_score_codex":0.00003782123,"about_ca_system_score_gemma":0.00008440359,"threshold_uncertainty_score":0.2034684},"labels":[],"label_agreement":null},{"id":"W2004798418","doi":"10.1128/aac.48.7.2700-2703.2004","title":"Constitutive Activation of the <i>PDR16</i> Promoter in a <i>Candida albicans</i> Azole-Resistant Clinical Isolate Overexpressing <i>CDR1</i> and <i>CDR2</i>","year":2004,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research; Stanford Bio-X","keywords":"Azole; Candida albicans; Biology; Gene; Microbiology; Efflux; Multiple drug resistance; Mutation; Downregulation and upregulation; Strain (injury); Molecular biology; Drug resistance; Antifungal; Genetics","score_opus":0.01664782681473506,"score_gpt":0.2902121187811365,"score_spread":0.2735642919664014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004798418","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99454606,0.0000614115,0.00016122875,0.0035219828,0.00008794899,0.00057857926,0.000026122192,0.000015510514,0.0010011486],"genre_scores_gemma":[0.9867377,0.00084833615,0.00030902633,0.011882529,0.000060816725,0.0000037561992,0.0000057048246,0.00002001919,0.0001320936],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99853426,0.00006222277,0.0005386907,0.00041297328,0.00018361156,0.00026822972],"domain_scores_gemma":[0.99930334,0.000049401893,0.0002032299,0.00028324328,0.00006797382,0.00009282871],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002740027,0.00021613811,0.00047208555,0.00004292185,0.00012626626,0.00003319272,0.00009392659,0.00015872216,0.00002403891],"category_scores_gemma":[0.000038738854,0.00014972556,0.00013209607,0.00018737577,0.00066041556,0.00014819669,0.00005697418,0.0002881059,9.309523e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002802493,0.0008864373,0.55274624,0.00030258604,0.0001301855,0.000018362884,0.001287636,0.0000055778037,0.4345988,0.0002888298,0.0015927615,0.0053400896],"study_design_scores_gemma":[0.012396474,0.00035945768,0.8229114,0.002046607,0.00009067979,0.000033487155,0.00020280467,0.000023287419,0.15170711,0.00049767195,0.009367867,0.00036319788],"about_ca_topic_score_codex":0.0003196437,"about_ca_topic_score_gemma":0.000102139296,"teacher_disagreement_score":0.2828917,"about_ca_system_score_codex":0.000048376092,"about_ca_system_score_gemma":0.0001874879,"threshold_uncertainty_score":0.6105631},"labels":[],"label_agreement":null},{"id":"W2005529120","doi":"10.1186/1471-2334-11-261","title":"Anidulafungin compared with fluconazole for treatment of candidemia and other forms of invasive candidiasis caused by Candida albicans: a multivariate analysis of factors associated with improved outcome","year":2011,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Pfizer","keywords":"Anidulafungin; Fluconazole; Medical microbiology; Invasive candidiasis; Multivariate analysis; Candida albicans; Echinocandins; Medicine; Echinocandin; Internal medicine; Microbiology; Antifungal; Biology; Micafungin; Caspofungin","score_opus":0.044097554470111905,"score_gpt":0.2895662471780284,"score_spread":0.24546869270791652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005529120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949635,0.00023904971,0.00054560526,0.0000019634842,0.000010202485,0.0010929059,0.0030620855,0.000027322381,0.00005731508],"genre_scores_gemma":[0.9994771,0.00001594826,0.000050538783,0.000017948676,0.000004045168,0.00009314853,0.00026898194,0.000025742984,0.000046539142],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987421,0.000052294945,0.0004801709,0.00030080232,0.00018292473,0.00024170893],"domain_scores_gemma":[0.99829686,0.00042593706,0.00052060536,0.00028979633,0.00028491032,0.00018190421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007374366,0.00025706625,0.0012130077,0.00020584332,0.000055362616,0.000005360637,0.000044562927,0.000080407626,0.00006449062],"category_scores_gemma":[0.00024694626,0.00015658487,0.0002480571,0.00043534033,0.00023175738,0.000070735565,0.000009275955,0.000029974812,5.2761866e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024944195,0.0011850969,0.9857832,0.0002681807,0.00498886,0.0000015068127,0.0015046734,0.000020285026,0.0036962628,0.000015165568,0.0000058608957,0.000036480338],"study_design_scores_gemma":[0.007293046,0.002371628,0.96803373,0.000094555675,0.007834527,3.079955e-7,0.0010014042,0.00035036702,0.012837387,0.000010920847,0.000002475785,0.00016966091],"about_ca_topic_score_codex":0.021931414,"about_ca_topic_score_gemma":0.107957795,"teacher_disagreement_score":0.08602638,"about_ca_system_score_codex":0.00019607108,"about_ca_system_score_gemma":0.00035132893,"threshold_uncertainty_score":0.98458165},"labels":[],"label_agreement":null},{"id":"W2006032924","doi":"10.1111/j.1525-1470.2009.00991.x","title":"Sporotrichoid Aspergillosis in an Immunocompromised Child: A Case Report and Review of the Literature","year":2009,"lang":"en","type":"review","venue":"Pediatric Dermatology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"","keywords":"Medicine; Aspergillosis; Immunosuppression; Primary immunodeficiency; Mycosis; Opportunistic infection; Dermatology; Referral; Infectious disease (medical specialty); Disease; Immunology; Pathology; Human immunodeficiency virus (HIV); Viral disease; Family medicine","score_opus":0.01758454296500917,"score_gpt":0.3300611080283481,"score_spread":0.31247656506333893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006032924","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0040205573,0.9929061,5.3425265e-7,0.00028164737,0.0001203539,0.0020611808,0.00003117675,0.00002135378,0.00055710686],"genre_scores_gemma":[0.0018874363,0.9971759,0.00008654933,0.00038045214,0.00014829694,0.00006559314,0.00013484326,0.00002864414,0.000092341026],"study_design_codex":"systematic_review","study_design_gemma":"case_report","domain_scores_codex":[0.99674344,0.0004688217,0.0016113657,0.0006164731,0.00024048926,0.00031940587],"domain_scores_gemma":[0.9975117,0.00014714873,0.00085718586,0.0011830186,0.00016863678,0.00013235105],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00049128017,0.00042474316,0.0031204263,0.0003141789,0.00007230665,0.000011659238,0.00022322332,0.00054109714,0.000033783217],"category_scores_gemma":[0.0005827062,0.00025840255,0.00055687537,0.0013981223,0.00010292246,0.00007641604,0.00008667447,0.0009705578,0.0000037312946],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054003267,0.0005099723,0.024046298,0.5365644,0.000097689364,0.16374213,0.00012043396,9.971993e-9,2.285571e-7,0.000036132507,0.0014597453,0.27336895],"study_design_scores_gemma":[0.00071099354,0.00008170049,0.0047690324,0.06548108,0.0031058432,0.6721758,0.000011519158,6.42775e-7,5.7758916e-7,0.000020351003,0.2532888,0.0003536348],"about_ca_topic_score_codex":0.00001876012,"about_ca_topic_score_gemma":0.000021686294,"teacher_disagreement_score":0.5084337,"about_ca_system_score_codex":0.00007531442,"about_ca_system_score_gemma":0.00049657474,"threshold_uncertainty_score":0.9999868},"labels":[],"label_agreement":null},{"id":"W2007123701","doi":"10.1007/s00247-003-0919-4","title":"The radiological spectrum of invasive aspergillosis in children: a 10-year review","year":2003,"lang":"en","type":"review","venue":"Pediatric Radiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":140,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Aspergillosis; Radiology; Neuroradiology; Radiological weapon; Osteomyelitis; Incidence (geometry); Retrospective cohort study; Surgery","score_opus":0.027782944027542097,"score_gpt":0.31951104720842616,"score_spread":0.29172810318088405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007123701","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00082789577,0.99485904,0.0000019914655,0.00015861513,0.00017212522,0.0020238715,0.000038482805,0.0000206777,0.0018973069],"genre_scores_gemma":[0.00030373523,0.9980074,0.000060051294,0.00019210228,0.00053783087,0.00012943587,0.00011462484,0.00003693062,0.00061787484],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9956283,0.0011836336,0.0015803039,0.00074095884,0.0002549539,0.0006118735],"domain_scores_gemma":[0.99663764,0.0014930528,0.0006980226,0.0009497777,0.00007319085,0.00014831322],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015418172,0.0004966629,0.004084692,0.00021903393,0.000076763725,0.0000052794985,0.00045231494,0.0006644393,0.00054909766],"category_scores_gemma":[0.0028760175,0.0002758504,0.0010601466,0.0010161564,0.00036834355,0.000023604505,0.00007606755,0.0009471417,0.00016156684],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029443917,0.0006875056,0.5341434,0.12615857,0.0012308465,0.0002944554,0.000035490928,3.9686267e-7,4.4674712e-7,0.002256745,0.097842924,0.2370548],"study_design_scores_gemma":[0.0010529638,0.0010296438,0.034683406,0.008185995,0.0051101376,0.0016027924,0.000013590451,2.1232367e-7,3.0493797e-7,0.00024137886,0.94741887,0.0006607021],"about_ca_topic_score_codex":0.000011560608,"about_ca_topic_score_gemma":0.000012703934,"teacher_disagreement_score":0.84957594,"about_ca_system_score_codex":0.00022510436,"about_ca_system_score_gemma":0.0009649398,"threshold_uncertainty_score":0.99996936},"labels":[],"label_agreement":null},{"id":"W2009061081","doi":"10.1186/cc5272","title":"Candida colonization and risk of candidemia in a cardiac surgical intensive care unit","year":2007,"lang":"en","type":"article","venue":"Critical Care","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Incidence (geometry); Colonization; Intensive care unit; Intensive care medicine; Emergency medicine; Microbiology","score_opus":0.01896622229482006,"score_gpt":0.3430869900798849,"score_spread":0.3241207677850649,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009061081","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912481,0.006220659,0.00006893494,0.000115800445,0.00007831279,0.00020274283,0.00009056565,0.000013025236,0.001961874],"genre_scores_gemma":[0.9995296,0.00016241103,0.00007076923,0.000087409964,0.000056941066,0.0000030824629,0.000053220123,0.000009269816,0.000027274615],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99904674,0.000074623335,0.00024783993,0.00021413859,0.00018827029,0.00022839846],"domain_scores_gemma":[0.9978613,0.00043923073,0.000022460665,0.00015774631,0.0013492136,0.000170036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022843234,0.00009449528,0.0003544351,0.00006830922,0.000045655765,0.0000055934916,0.000028368422,0.0001480691,0.000026635966],"category_scores_gemma":[0.0025982617,0.000082122184,0.000066685476,0.00019709638,0.0002966017,0.000032321946,0.000027924123,0.0002544235,0.0000016959173],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004201924,0.000010752304,0.9930668,0.00048697193,0.000010300301,0.00019095605,0.0035657275,4.7120548e-7,0.00011666978,0.00065429596,0.00003496176,0.0014418932],"study_design_scores_gemma":[0.00077240623,0.00022342597,0.92456025,0.00017234165,0.00013478735,0.000008222276,0.07200446,0.000009752353,0.0014423088,0.000053168205,0.00053187285,0.00008701841],"about_ca_topic_score_codex":0.0011007,"about_ca_topic_score_gemma":0.0033409374,"teacher_disagreement_score":0.068506576,"about_ca_system_score_codex":0.00012629357,"about_ca_system_score_gemma":0.00013270898,"threshold_uncertainty_score":0.33488455},"labels":[],"label_agreement":null},{"id":"W2009223654","doi":"10.5326/jaaha-ms-6083","title":"Disseminated Protothecosis Associated With Diskospondylitis in a Dog","year":2014,"lang":"en","type":"article","venue":"Journal of the American Animal Hospital Association","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Voriconazole; Pathology; Lumbar; Physical examination; Dermatology; Surgery; Antifungal","score_opus":0.0043220958933008116,"score_gpt":0.24610968091392216,"score_spread":0.24178758502062134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009223654","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99495894,0.000019591516,0.000024415154,0.0040360335,0.0000534851,0.00031650887,0.0000066833845,0.000011580475,0.0005727431],"genre_scores_gemma":[0.99907535,0.000015690242,0.0001040004,0.00021556935,0.000079012,0.0000066748244,0.0000020910443,0.000016074431,0.00048552811],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984252,0.00020543709,0.0004109538,0.00012976221,0.0005897806,0.00023890959],"domain_scores_gemma":[0.9977604,0.00023300109,0.0014453473,0.00013854026,0.00034323352,0.00007944211],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000948161,0.00012217755,0.00047600965,0.00007370404,0.00005705465,0.00002485827,0.000136014,0.000049230464,0.000014236388],"category_scores_gemma":[0.002832579,0.00007216966,0.0001916551,0.0006270981,0.00009615226,0.00014387346,0.000022805358,0.0003655732,0.000003341261],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055580866,0.000387334,0.9947239,0.000009075481,0.00009421915,0.0000096991835,0.0002630053,0.0000013968512,0.0022060343,0.000022559438,0.00048984407,0.0012370987],"study_design_scores_gemma":[0.00095514866,0.0032929094,0.99392134,0.0002914651,0.00009266777,0.000006106658,0.00034766243,0.000092635244,0.0006963226,0.00008066701,0.00012663369,0.00009641297],"about_ca_topic_score_codex":0.000061631064,"about_ca_topic_score_gemma":0.00010457666,"teacher_disagreement_score":0.0041164006,"about_ca_system_score_codex":0.00090467016,"about_ca_system_score_gemma":0.00009467929,"threshold_uncertainty_score":0.33910662},"labels":[],"label_agreement":null},{"id":"W2009633046","doi":"10.1016/j.fgb.2009.06.008","title":"The Candida albicans histidine kinase Chk1p: Signaling and cell wall mannan","year":2009,"lang":"en","type":"article","venue":"Fungal Genetics and Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; U.S. Public Health Service; National Institutes of Health","keywords":"Mannan; Mutant; Biology; Candida albicans; Histidine; Kinase; Histidine kinase; Biochemistry; Saccharomyces cerevisiae; Biophysics; Molecular biology; Cell biology; Yeast; Amino acid; Microbiology; Gene; Polysaccharide","score_opus":0.02013377872590595,"score_gpt":0.2752655835047519,"score_spread":0.25513180477884595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009633046","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98212355,0.014180679,0.00005703024,0.0019565467,0.00006689465,0.00015500833,0.000013681034,0.000013365179,0.0014332583],"genre_scores_gemma":[0.99369276,0.0035915347,0.00024168935,0.0008710636,0.00012782445,0.0000033427762,0.000014348597,0.0000060112866,0.001451444],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992027,0.00003950898,0.00017751365,0.0002580764,0.00005412692,0.00026801767],"domain_scores_gemma":[0.99950844,0.000075151045,0.000043061915,0.0001826837,0.000053185206,0.00013748097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018626337,0.00012342204,0.00019401562,0.000022468821,0.00018939527,0.000017799708,0.000055304015,0.000103669256,0.000029357669],"category_scores_gemma":[0.000033842374,0.00007522806,0.000036649675,0.00005155464,0.00019249323,0.000007627993,0.000027490252,0.0001367658,0.000002833751],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005591556,0.00012728662,0.3927216,0.00006203243,0.000036932026,0.000045361696,0.00023105668,0.0000014549507,0.54505485,0.0017109112,0.001432126,0.058017243],"study_design_scores_gemma":[0.001588506,0.0033442844,0.8354677,0.000042470023,0.00014595762,0.000056532735,0.00021915673,0.000541807,0.021217477,0.0029635818,0.13407637,0.00033617235],"about_ca_topic_score_codex":0.00004733785,"about_ca_topic_score_gemma":0.000119788085,"teacher_disagreement_score":0.5238373,"about_ca_system_score_codex":0.000015771744,"about_ca_system_score_gemma":0.000042897376,"threshold_uncertainty_score":0.30677113},"labels":[],"label_agreement":null},{"id":"W2010240001","doi":"10.1097/ftd.0b013e31823f3516","title":"Therapeutic Drug Monitoring of Voriconazole in Children","year":2011,"lang":"en","type":"review","venue":"Therapeutic Drug Monitoring","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Voriconazole; Aspergillosis; Therapeutic drug monitoring; Pharmacokinetics; Drug; Aspergillus; Antifungal drug; Aspergillus fumigatus; Pharmacology; Medicine; Antifungal drugs; Plasma concentration; Antifungal; Microbiology; Biology; Immunology","score_opus":0.06866155452731287,"score_gpt":0.3524810210993082,"score_spread":0.2838194665719953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010240001","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.042893227,0.95339185,0.000011758377,0.000010733389,0.0011774569,0.0014856877,0.000014597707,0.00012303068,0.0008916452],"genre_scores_gemma":[0.27904955,0.7185384,0.00013910072,0.0000076178344,0.00088447455,0.000094589224,0.000013811119,0.00014178995,0.0011306319],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99567467,0.00035211616,0.0015486002,0.0009162761,0.0006361056,0.00087223394],"domain_scores_gemma":[0.99730885,0.00030935812,0.00064537325,0.0013618178,0.00014940319,0.0002252079],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010418871,0.0009040328,0.0032000716,0.0005245342,0.00010935936,0.000033686247,0.0006683462,0.0004111268,0.00007021046],"category_scores_gemma":[0.000035996654,0.00074307306,0.0009287558,0.0008080613,0.00019097653,0.0001741977,0.00014529291,0.0013706539,0.00008912078],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057765956,0.00025861256,0.37806702,0.004688868,0.00053529645,0.00001057881,0.00060156593,3.1333542e-7,0.00003073721,0.000051461317,0.0000035493913,0.6156942],"study_design_scores_gemma":[0.0030712294,0.00027670313,0.78771365,0.07996386,0.0068076965,0.00013349282,0.0015070188,0.0000043278264,0.0021956963,0.0006244529,0.11509837,0.0026035106],"about_ca_topic_score_codex":0.0003305723,"about_ca_topic_score_gemma":0.0000050839903,"teacher_disagreement_score":0.6130907,"about_ca_system_score_codex":0.00048592375,"about_ca_system_score_gemma":0.0005050746,"threshold_uncertainty_score":0.999502},"labels":[],"label_agreement":null},{"id":"W2010510220","doi":"10.1002/yea.977","title":"cDNA cloning, biochemical and phylogenetic characterization of β‐ and β′‐subunits of <i>Candida albicans</i> protein kinase CK2","year":2003,"lang":"en","type":"article","venue":"Yeast","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Agencia Nacional de Promoción Científica y Tecnológica; Medical Research Council; Consejo Nacional de Investigaciones Científicas y Técnicas; Medical Research Council Canada; Burroughs Wellcome Fund","keywords":"Biology; Candida albicans; Protein subunit; Biochemistry; Recombinant DNA; Saccharomyces cerevisiae; Molecular biology; Autophosphorylation; Peptide sequence; Corpus albicans; Yeast; Protein kinase A; Kinase; Gene; Genetics","score_opus":0.010198919793580676,"score_gpt":0.23600539459424794,"score_spread":0.22580647480066726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010510220","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99873024,0.00034512958,0.00006454568,0.000042003332,0.000009649473,0.00023653297,0.000022952538,0.000005396598,0.00054354727],"genre_scores_gemma":[0.9993692,0.000054682892,0.00022618195,0.00003633468,0.000014555107,0.0000052552073,0.000016169817,0.000007483095,0.00027012656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994605,0.00002246443,0.00016688759,0.00014856912,0.00010711645,0.000094420095],"domain_scores_gemma":[0.9996463,0.0000092337195,0.00007075934,0.0001369271,0.00006516933,0.00007163071],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000098919845,0.00007268021,0.00018857316,0.00003107772,0.000017548944,0.0000030125525,0.000019901074,0.000053937663,0.000040785526],"category_scores_gemma":[0.000114794195,0.00006334489,0.00002065416,0.00009511268,0.00016473008,0.00002054801,0.000009091517,0.000055763652,6.8468637e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000889784,0.000061630504,0.14874566,0.00019890112,0.000008949751,0.00000202145,0.00008318125,1.4535179e-8,0.8497767,0.0001748926,0.000009766618,0.00084931817],"study_design_scores_gemma":[0.00051286235,0.00013546595,0.37483275,0.00013660258,0.000027273647,0.0000063397015,0.00004881533,0.000008958933,0.6238931,0.000027449018,0.00032082346,0.000049591654],"about_ca_topic_score_codex":0.000011220122,"about_ca_topic_score_gemma":0.000004564959,"teacher_disagreement_score":0.22608708,"about_ca_system_score_codex":0.000007236819,"about_ca_system_score_gemma":0.000045842397,"threshold_uncertainty_score":0.25831294},"labels":[],"label_agreement":null},{"id":"W2011752164","doi":"10.1016/j.jcrc.2006.10.038","title":"Susceptibility patterns of Candida species recovered from Canadian intensive care units","year":2007,"lang":"en","type":"article","venue":"Journal of Critical Care","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Mount Sinai Hospital; McGill University; Kingston General Hospital; McMaster University; Queen's University; University of Toronto; Royal Victoria Hospital; Hamilton Health Sciences; Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"bioMérieux; Astellas Foundation for Research on Metabolic Disorders","keywords":"Medicine; Intensive care; Microbiology; Intensive care medicine; Biology","score_opus":0.03331020772939528,"score_gpt":0.31887407306942633,"score_spread":0.28556386534003103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011752164","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930208,0.0019662736,0.00017776359,0.0007997222,0.00043579834,0.00011874581,0.0008207476,0.000005363617,0.0026548053],"genre_scores_gemma":[0.9986196,0.00001946372,0.00017885634,0.0006632563,0.00037195705,2.4808708e-7,0.00006231377,0.000014212713,0.00007006036],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982109,0.00004876599,0.00067455793,0.00018578189,0.00051403575,0.00036594813],"domain_scores_gemma":[0.98924917,0.00037916764,0.00012066196,0.00029940822,0.009274187,0.00067739276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028638414,0.00015150063,0.0005554629,0.00016187844,0.000065601715,0.000015625417,0.00013515787,0.0001666033,0.00065188424],"category_scores_gemma":[0.005222057,0.00012329672,0.00021648158,0.00017675302,0.00022841961,0.00010876132,0.000023498227,0.00050337816,0.000004088926],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007576576,0.000026975527,0.983633,0.0006375288,0.000035296485,0.0008427354,0.007691581,4.4943553e-7,0.004702305,0.00024107384,0.00026990965,0.0011614995],"study_design_scores_gemma":[0.0007098739,0.0006598125,0.7511984,0.0003496372,0.00019889823,0.000035322344,0.23601547,6.0371696e-7,0.009261729,0.00013306175,0.0013223276,0.00011487537],"about_ca_topic_score_codex":0.022458488,"about_ca_topic_score_gemma":0.41252065,"teacher_disagreement_score":0.39006218,"about_ca_system_score_codex":0.00069349114,"about_ca_system_score_gemma":0.0011199047,"threshold_uncertainty_score":0.98405105},"labels":[],"label_agreement":null},{"id":"W2012052529","doi":"10.1111/j.1365-2958.2007.05931.x","title":"The zinc cluster transcription factor Tac1p regulates <i>PDR16</i> expression in <i>Candida albicans</i>","year":2007,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Biotechnology Research Institute; Institute for Research in Immunology and Cancer","funders":"Canadian Institutes of Health Research","keywords":"Biology; Gene; Candida albicans; Mutant; ATP-binding cassette transporter; Genetics; Gene expression; Molecular biology; Transporter","score_opus":0.006714232292461093,"score_gpt":0.2486684093946899,"score_spread":0.2419541771022288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012052529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99123055,0.001868732,0.0040478795,0.0009983067,0.00020211187,0.00046094594,0.000015720989,0.000036050587,0.0011397086],"genre_scores_gemma":[0.9966475,0.00009980421,0.000315506,0.0019051735,0.000044539745,0.000009087985,0.00006688653,0.000021573562,0.00088992284],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984815,0.00014067003,0.00040431067,0.0003847271,0.00008434292,0.00050442724],"domain_scores_gemma":[0.9992417,0.0001152279,0.00007113536,0.00041772943,0.00006513168,0.000089054905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004937108,0.00018753033,0.00028999156,0.0000708538,0.00011201713,0.000014218306,0.00014147846,0.00025271453,0.00007377195],"category_scores_gemma":[0.000067343404,0.00012417992,0.00014940147,0.00016604413,0.00025611126,0.000040154013,0.000035177924,0.0003063529,0.000026660344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008068203,0.00007306534,0.010825959,0.000024764722,0.00001668077,0.000076865406,0.0001743045,0.0000015334516,0.9853463,0.00006315313,0.0007495441,0.0018409765],"study_design_scores_gemma":[0.0015373015,0.00018140905,0.0371048,0.00008421818,0.000022460892,0.00007592982,0.00015510942,0.000005058826,0.89373535,0.00012139198,0.0668055,0.00017144806],"about_ca_topic_score_codex":0.000046245274,"about_ca_topic_score_gemma":0.0006028995,"teacher_disagreement_score":0.09161095,"about_ca_system_score_codex":0.00010265541,"about_ca_system_score_gemma":0.00005138498,"threshold_uncertainty_score":0.506391},"labels":[],"label_agreement":null},{"id":"W2012190419","doi":"10.1111/2049-632x.12168","title":"Promising results of cranberry in the prevention of oral<i>Candida</i>biofilms","year":2014,"lang":"en","type":"article","venue":"Pathogens and Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Candida albicans; Candida glabrata; CRANBERRY JUICE; Proanthocyanidin; Biofilm; Food science; Phytochemical; Chemistry; Microbiology; Context (archaeology); Grape seed extract; Vaccinium myrtillus; Corpus albicans; Biology; Botany; Polyphenol; Bacteria; Biochemistry; Antioxidant","score_opus":0.018911258035120667,"score_gpt":0.2861537897698907,"score_spread":0.26724253173477003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012190419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974508,0.00039959303,0.000100766156,0.00025317873,0.000012446702,0.00023675554,0.00004588351,0.0000042159154,0.0014963237],"genre_scores_gemma":[0.99951977,0.00004987282,0.00019839208,0.00009015233,0.000015102642,0.0000045228708,0.000018076906,0.000003728056,0.00010040683],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993132,0.00008616074,0.00022978317,0.00013728846,0.00014555393,0.000088031185],"domain_scores_gemma":[0.9995182,0.00005242288,0.00007253159,0.00022608283,0.000043471347,0.00008729997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005442793,0.000058145604,0.00015920053,0.000031992746,0.000022793687,0.0000037759937,0.000034178356,0.000024583538,0.000008050091],"category_scores_gemma":[0.00047590258,0.000036597656,0.000064887514,0.00009695727,0.00007782454,0.00002766475,0.000011415717,0.000043125765,6.336768e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0052516335,0.0009903786,0.84377784,0.0013963478,0.000017286666,0.000027975713,0.0009907099,0.00000404652,0.12050876,0.0008840712,0.00038375854,0.025767205],"study_design_scores_gemma":[0.0015175926,0.00017943111,0.99511945,0.00018499649,0.00009010892,0.0000011472224,0.00024907864,0.00020030815,0.00096709,0.0011783659,0.000264492,0.000047963535],"about_ca_topic_score_codex":0.00003432481,"about_ca_topic_score_gemma":0.000028802313,"teacher_disagreement_score":0.1513416,"about_ca_system_score_codex":0.000004879563,"about_ca_system_score_gemma":0.000056483717,"threshold_uncertainty_score":0.14924091},"labels":[],"label_agreement":null},{"id":"W2012383276","doi":"10.1007/s00134-008-1338-7","title":"Management of invasive candidiasis and candidemia in adult non-neutropenic intensive care unit patients: Part I. Epidemiology and diagnosis","year":2008,"lang":"en","type":"review","venue":"Intensive Care Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":171,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University Health Network","funders":"Bayer Vital; Novartis Pharma; Astellas Pharma; Fresenius Medical Care North America; Gilead Sciences; Sanofi; Pfizer","keywords":"Medicine; Intensive care medicine; Invasive candidiasis; Intensive care unit; Candida glabrata; Anesthesiology; Blood culture; Epidemiology; Fungemia; Intensive care; Risk factor; Neutropenia; Mycosis; Antifungal; Internal medicine; Pathology; Immunology; Fluconazole; Dermatology; Antibiotics; Chemotherapy; Microbiology","score_opus":0.06297537666170018,"score_gpt":0.3616360645324738,"score_spread":0.29866068787077366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012383276","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06987436,0.92543596,0.0000027909405,0.0005330281,0.00043083864,0.0029889345,0.00023358449,0.000019128685,0.00048136243],"genre_scores_gemma":[0.066046596,0.9281525,0.00004087105,0.003979285,0.00015281663,0.00039479902,0.0010760193,0.00007485688,0.00008223732],"study_design_codex":"observational","study_design_gemma":"systematic_review","domain_scores_codex":[0.99522096,0.00044766278,0.0020091743,0.0012400508,0.0004023558,0.0006798137],"domain_scores_gemma":[0.9840122,0.002014868,0.0009058137,0.0008080772,0.011805683,0.00045334696],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002605446,0.00088740664,0.006011896,0.0006005196,0.000094640396,0.0000044679887,0.00022162327,0.00061461853,0.00004952773],"category_scores_gemma":[0.014019025,0.0006226725,0.00037859046,0.00058571063,0.0015567793,0.00007904211,0.00032637877,0.0010261578,0.000008112796],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036191777,0.000038688595,0.49300957,0.06931534,0.00095989235,0.0016328066,0.008348971,1.929857e-7,2.871575e-7,0.000056231806,0.009757305,0.4165188],"study_design_scores_gemma":[0.007838751,0.0036539978,0.18833412,0.30141473,0.0070125917,0.00031393336,0.2932962,0.0000012663985,0.000013075963,0.000034476925,0.19692662,0.001160263],"about_ca_topic_score_codex":0.0027180684,"about_ca_topic_score_gemma":0.0020428426,"teacher_disagreement_score":0.41535854,"about_ca_system_score_codex":0.0005977741,"about_ca_system_score_gemma":0.0004189541,"threshold_uncertainty_score":0.99962246},"labels":[],"label_agreement":null},{"id":"W2012531879","doi":"10.3109/13693786.2011.633233","title":"Genetic and phenotypic evaluation of<i>Candida albicans</i>strains isolated from subgingival biofilm of diabetic patients with chronic periodontitis","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Candida albicans; Microbiology; Biology; Corpus albicans; Virulence; Genotype; Periodontitis; Chronic periodontitis; Biofilm; Polymerase chain reaction; Gene; Genetics; Bacteria; Medicine; Internal medicine","score_opus":0.010620935286951808,"score_gpt":0.2576829007383082,"score_spread":0.2470619654513564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012531879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99647087,0.0022659856,0.00021855987,0.00013711088,0.0001517943,0.0004225255,0.000032026175,0.000011442248,0.00028966588],"genre_scores_gemma":[0.9993283,0.000080248,0.00027708424,0.00009803051,0.00011383283,0.000016181639,0.000057009704,0.000011251253,0.00001802544],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99828166,0.00014490499,0.00034997478,0.00021853931,0.0006984291,0.00030650207],"domain_scores_gemma":[0.9990364,0.00014607434,0.00012391189,0.00021879218,0.00021895289,0.00025589656],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046811384,0.00012333212,0.00045462503,0.00006346706,0.000033114415,0.0000020713599,0.00007102532,0.00019178947,0.0035778212],"category_scores_gemma":[0.00055965636,0.00009236852,0.00004397664,0.00014196808,0.00056108413,0.00004212058,0.000033260756,0.00017531628,0.000005816263],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022980176,0.00030194208,0.97846895,0.000096211756,0.0000997139,0.0000027260287,0.0002736322,6.368309e-7,0.0037092096,0.000037202502,0.00004469084,0.016735261],"study_design_scores_gemma":[0.0033050398,0.0010540265,0.9938728,0.00011881524,0.00039902085,0.0000033377914,0.000042986194,0.00059409114,0.00038024102,0.0000434137,0.000103730614,0.00008245963],"about_ca_topic_score_codex":0.0002978085,"about_ca_topic_score_gemma":0.00035849438,"teacher_disagreement_score":0.016652802,"about_ca_system_score_codex":0.00009472524,"about_ca_system_score_gemma":0.00045123266,"threshold_uncertainty_score":0.99733305},"labels":[],"label_agreement":null},{"id":"W2012538966","doi":"10.1371/journal.pmed.0050219","title":"Emergence of Azole Resistance in Aspergillus fumigatus and Spread of a Single Resistance Mechanism","year":2008,"lang":"en","type":"article","venue":"PLoS Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":722,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"ZonMw","keywords":"Aspergillus fumigatus; Posaconazole; Itraconazole; Voriconazole; Microbiology; Aspergillosis; Biology; Azole; Drug resistance; Immunology; Antifungal","score_opus":0.040416525865376154,"score_gpt":0.2658525990771546,"score_spread":0.22543607321177844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012538966","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9704918,0.009367345,0.00012923418,0.0010275432,0.000076368415,0.00037275633,0.000013396577,0.000025156096,0.0184964],"genre_scores_gemma":[0.9935947,0.0019834277,0.0015753397,0.000126993,0.000066095876,0.000009746795,0.000007284485,0.000019910596,0.0026164704],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978774,0.000059507376,0.00075469643,0.00039214708,0.0006248853,0.0002913342],"domain_scores_gemma":[0.9986807,0.00016235981,0.00023397332,0.00051532936,0.00024904567,0.00015855664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034538595,0.00019262104,0.00082875526,0.00016957629,0.000047898688,8.2852614e-7,0.00011941484,0.00011041216,0.00026714947],"category_scores_gemma":[0.0009762604,0.00015664333,0.000059433933,0.0005102182,0.0006940172,0.00007642832,0.00003956483,0.0001996255,0.0000026265013],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027331186,0.0009432519,0.13048185,0.002498627,0.00009767852,0.00042298643,0.0048171477,5.600021e-7,0.8479172,0.006875446,0.0029762937,0.00023582792],"study_design_scores_gemma":[0.008453072,0.0019186281,0.6353713,0.009497812,0.00034396068,0.000056108533,0.003941489,0.00010009415,0.330158,0.008321593,0.0012661909,0.0005717389],"about_ca_topic_score_codex":0.000095940115,"about_ca_topic_score_gemma":0.0011972548,"teacher_disagreement_score":0.5177592,"about_ca_system_score_codex":0.00003810502,"about_ca_system_score_gemma":0.00010563983,"threshold_uncertainty_score":0.63877296},"labels":[],"label_agreement":null},{"id":"W2012929608","doi":"10.3129/i07-174","title":"Managing Candida endophthalmitis","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Ophthalmology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Endophthalmitis; Medicine; Ophthalmology; Optometry","score_opus":0.024213865540438327,"score_gpt":0.2987625559483894,"score_spread":0.2745486904079511,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012929608","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77462596,0.00097448315,0.00016131948,0.00040513056,0.00048368296,0.00006641096,0.000003964466,0.000002289252,0.22327673],"genre_scores_gemma":[0.9962299,0.0000065905087,0.0005683453,0.00010186975,0.00025602937,3.2693424e-7,0.0000022131894,0.000015108355,0.0028196485],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99876016,0.000033336226,0.00042980546,0.00013227265,0.0001517754,0.0004926589],"domain_scores_gemma":[0.99833924,0.000092021364,0.00014990538,0.00019320114,0.00024775858,0.0009778953],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00074428465,0.00011161499,0.00034392052,0.00036495487,0.000094998904,0.000012293261,0.00013374037,0.0001144482,0.0022632347],"category_scores_gemma":[0.0002900093,0.0001001135,0.00015396051,0.0001964117,0.00018829494,0.00007364731,0.0000066756097,0.0003399712,0.00002916673],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013562349,0.00001637992,0.6597659,0.000028398807,0.000054097232,0.33710134,0.00013096142,0.000001602571,0.0005201917,0.00030202416,0.00042830047,0.001515216],"study_design_scores_gemma":[0.00045274865,0.00037985164,0.44963026,0.000053732994,0.000034532673,0.5470629,0.00029084613,0.0000016900835,0.0005410919,0.00066265365,0.00081666297,0.000073059],"about_ca_topic_score_codex":0.0033351902,"about_ca_topic_score_gemma":0.000609199,"teacher_disagreement_score":0.22160389,"about_ca_system_score_codex":0.0002630946,"about_ca_system_score_gemma":0.0011833481,"threshold_uncertainty_score":0.9986488},"labels":[],"label_agreement":null},{"id":"W2013439407","doi":"10.1371/journal.ppat.0020129","title":"Fungal Invasion of Normally Non-Phagocytic Host Cells","year":2006,"lang":"en","type":"review","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":269,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Burroughs Wellcome Fund","keywords":"Biology; Microbiology; Endocytosis; Cryptococcus neoformans; Cell biology; Phagocytosis; Candida albicans; Endothelial stem cell; Cell; In vitro","score_opus":0.05083613145915424,"score_gpt":0.31075827487434765,"score_spread":0.25992214341519343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013439407","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00405593,0.98835975,0.00006170023,0.0000059387075,0.00018509675,0.0015090792,0.00054175017,0.000053302967,0.0052274424],"genre_scores_gemma":[0.0044314326,0.99142516,0.0005343579,0.000043505526,0.00032762592,0.000042629534,0.00032693744,0.00009805466,0.002770323],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99696803,0.00012373281,0.0011347575,0.0006450129,0.00065064774,0.00047781697],"domain_scores_gemma":[0.9978095,0.0002022474,0.0005214241,0.001012518,0.00024109217,0.0002131687],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00032728928,0.0005467062,0.0027862422,0.00022636192,0.00007020683,0.000013940698,0.00025517528,0.0005342313,0.00020279616],"category_scores_gemma":[0.00014539364,0.00041665277,0.0011029786,0.0004242497,0.00013922807,0.000056956666,0.000109348584,0.0005776383,0.00040387255],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035487677,0.0043807584,0.00775521,0.47106797,0.0015291916,0.0031568236,0.00025838197,8.980592e-7,0.063799135,0.00006733451,0.0062950957,0.44133434],"study_design_scores_gemma":[0.0020553072,0.0016138847,0.004712378,0.0894844,0.016748328,0.0002020929,0.000083450395,0.000048593247,0.006659458,0.000015921025,0.8764183,0.001957916],"about_ca_topic_score_codex":0.0000222946,"about_ca_topic_score_gemma":0.000031421743,"teacher_disagreement_score":0.87012315,"about_ca_system_score_codex":0.00022133702,"about_ca_system_score_gemma":0.0009664963,"threshold_uncertainty_score":0.9998285},"labels":[],"label_agreement":null},{"id":"W2013441444","doi":"10.1016/j.ijantimicag.2005.10.014","title":"In vitro interactions of anidulafungin with azole antifungals, amphotericin B and 5-fluorocytosine against Candida species","year":2006,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Health Sciences Centre","funders":"","keywords":"Anidulafungin; Candida krusei; Amphotericin B; Candida tropicalis; Echinocandin; Candida parapsilosis; Ketoconazole; Candida glabrata; Itraconazole; Fluconazole; Microbiology; Echinocandins; Biology; Candida albicans; Pharmacology; Azole; Antifungal; Caspofungin","score_opus":0.009728368250374759,"score_gpt":0.26100873882933845,"score_spread":0.2512803705789637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013441444","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972384,0.000091509806,0.00036146032,0.0010501774,0.00035106638,0.000100869285,0.000056567864,0.0000044014523,0.00074552855],"genre_scores_gemma":[0.99728113,0.00017939552,0.0013189084,0.00041114748,0.0002460763,2.9154992e-7,0.000028648596,0.0000123777645,0.00052201265],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987319,0.00002848015,0.0005942128,0.00014259211,0.00035639002,0.00014638588],"domain_scores_gemma":[0.9990024,0.000038875667,0.00035986622,0.00009223563,0.00044903296,0.000057596113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014198468,0.0001328508,0.0003600093,0.0003141992,0.00002569992,0.00003073788,0.0001308365,0.000041239313,0.00007372946],"category_scores_gemma":[0.000036740304,0.00010417366,0.000099661665,0.00014752426,0.00011496999,0.00027371335,0.000037425467,0.00020191658,0.0000024094086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027483176,0.00044136654,0.13471386,0.000035368434,0.00011456495,0.00046863014,0.00012566693,0.00005298157,0.85793406,0.00002327333,0.0029351444,0.00040675525],"study_design_scores_gemma":[0.00287171,0.0001482707,0.47495994,0.00057575566,0.00005364056,0.0005222651,0.00014041582,0.00007445778,0.5178614,0.000017883056,0.0026580896,0.0001161656],"about_ca_topic_score_codex":0.00024667112,"about_ca_topic_score_gemma":0.00017006136,"teacher_disagreement_score":0.34024608,"about_ca_system_score_codex":0.00013769824,"about_ca_system_score_gemma":0.0001130908,"threshold_uncertainty_score":0.42480788},"labels":[],"label_agreement":null},{"id":"W2013986432","doi":"10.1136/thx.2010.151043.34","title":"P183 Global burden of allergic bronchopulmonary aspergillosis (ABPA) complicating asthma","year":2010,"lang":"en","type":"article","venue":"Thorax","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"","keywords":"Medicine; Asthma; Allergic bronchopulmonary aspergillosis; Population; Demography; Pediatrics; Environmental health; Immunology","score_opus":0.015791095812157593,"score_gpt":0.30592105350573884,"score_spread":0.29012995769358124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013986432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9534762,0.00028399125,0.0001159406,0.00091610313,0.00013039421,0.00021550516,0.000027022541,0.000067559944,0.04476731],"genre_scores_gemma":[0.9949071,0.000029852523,0.0037790914,0.00014172531,0.0002463881,0.0000063948505,0.00002588464,0.000015050008,0.00084855803],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99871856,0.000034573248,0.00033475176,0.0003201288,0.0003245276,0.00026747957],"domain_scores_gemma":[0.9988814,0.000054116925,0.000111290814,0.0006311125,0.00015341686,0.00016864669],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027319734,0.00015233242,0.00037399374,0.000029760573,0.0000761473,0.000008093812,0.00017888116,0.00014198813,0.0005762944],"category_scores_gemma":[0.00014984969,0.00013127954,0.00015701714,0.00021762023,0.00021085024,0.000059219055,0.000078509234,0.00029523397,0.00010883988],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007379941,0.00035843274,0.5411338,0.0003039527,0.00011468325,0.00006409191,0.00027005083,0.000013109168,0.39936772,0.004887639,0.0024889715,0.050259557],"study_design_scores_gemma":[0.0007061609,0.00024360986,0.98237383,0.000119094184,0.000063606145,0.0000771167,0.0004379241,0.00073736894,0.0042731306,0.0009739033,0.009782887,0.00021138215],"about_ca_topic_score_codex":0.0002704375,"about_ca_topic_score_gemma":0.00009586287,"teacher_disagreement_score":0.44124,"about_ca_system_score_codex":0.00004497732,"about_ca_system_score_gemma":0.00008677733,"threshold_uncertainty_score":0.63100195},"labels":[],"label_agreement":null},{"id":"W2014201325","doi":"10.1139/w02-018","title":"Utility of a pre-optimized kit for random amplified polymorphic DNA in typing<i>Candida albicans</i>","year":2002,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"RAPD; Typing; Biology; Candida albicans; Genetics; Corpus albicans; genomic DNA; Microbiology; DNA profiling; DNA; Karyotype; Gene; Chromosome; Genetic diversity; Population; Medicine","score_opus":0.023914429163912683,"score_gpt":0.2479501665824909,"score_spread":0.2240357374185782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014201325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993955,0.002596366,0.0007662,0.0014296792,0.00019426022,0.00042940443,0.00011716704,0.0000030406336,0.00050885795],"genre_scores_gemma":[0.99792695,0.00007077704,0.0006361167,0.00064214855,0.00007094819,0.0000032984688,0.0000132414125,0.000012073841,0.00062443083],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985576,0.000116996554,0.0007135679,0.00018038525,0.0000368796,0.00039454235],"domain_scores_gemma":[0.99870276,0.00021221336,0.0002807024,0.00022395693,0.00023512977,0.0003452033],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005840367,0.00013573199,0.0007568163,0.0002697267,0.000046901365,0.000005693001,0.00016061097,0.00018437517,0.0013617554],"category_scores_gemma":[0.0005715997,0.000113875154,0.00025483812,0.00016174749,0.00031216428,0.000040111172,0.0000061299775,0.0002652525,0.0000037544285],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.020064985,0.00042885548,0.4237887,0.0005513526,0.0005706833,0.000305757,0.0026017823,0.00002506273,0.50272787,0.00020762887,0.04117917,0.007548134],"study_design_scores_gemma":[0.11022087,0.0046951505,0.6669351,0.002037976,0.0010133405,0.0033474432,0.0015755706,0.0008437302,0.052769233,0.0012264414,0.15405427,0.0012809006],"about_ca_topic_score_codex":0.0025102557,"about_ca_topic_score_gemma":0.040610034,"teacher_disagreement_score":0.44995865,"about_ca_system_score_codex":0.0001004528,"about_ca_system_score_gemma":0.00083670387,"threshold_uncertainty_score":0.9995511},"labels":[],"label_agreement":null},{"id":"W2014413639","doi":"10.1080/13693780400029247","title":"Intracellular and extracellular growth of<i>Aspergillus fumigatus</i>","year":2005,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"University of British Columbia; Simon Fraser University","keywords":"Aspergillus fumigatus; Extracellular; Microbiology; Biology; A549 cell; Siderophore; Intracellular; Cell culture; Conidium; Cell biology; Biochemistry; Gene","score_opus":0.028555963191806644,"score_gpt":0.33422961108127597,"score_spread":0.3056736478894693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014413639","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004284948,0.9959648,0.00015959766,0.00040982917,0.00029327985,0.0007654386,0.000022421666,0.000050325805,0.0019057974],"genre_scores_gemma":[0.0015650986,0.9953853,0.0004831972,0.0002343238,0.0006238602,0.00004179483,0.0001096407,0.00005731983,0.0014995045],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99645495,0.0003355565,0.0012408285,0.00072049245,0.0007097277,0.0005384326],"domain_scores_gemma":[0.9976205,0.0007120375,0.00032302298,0.0005459683,0.00013457442,0.0006639006],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010733831,0.0004745865,0.0034690402,0.00020606136,0.000057241254,0.000006216368,0.0002791039,0.0016459414,0.0028774817],"category_scores_gemma":[0.0020539083,0.00034428827,0.00052898075,0.0003261491,0.001028441,0.00003472518,0.00017475555,0.0013740236,0.000118194],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006283945,0.00030159543,0.00023997837,0.020947363,0.00024534442,0.0009019139,0.000033664157,3.3638792e-9,0.000028353685,0.0028485109,0.0016137103,0.9727767],"study_design_scores_gemma":[0.00058615074,0.0003590994,0.000112933725,0.005267483,0.0013135695,0.00067708513,0.000012543477,0.0000058743535,0.000011553464,0.000082145205,0.99131376,0.00025780217],"about_ca_topic_score_codex":0.000020890084,"about_ca_topic_score_gemma":0.000021077078,"teacher_disagreement_score":0.9897001,"about_ca_system_score_codex":0.00011188438,"about_ca_system_score_gemma":0.0010298478,"threshold_uncertainty_score":0.99990094},"labels":[],"label_agreement":null},{"id":"W2015106651","doi":"10.1111/j.1399-3046.2011.01517.x","title":"Fungal prophylaxis after pediatric organ transplantation: To be, or not to be, that is the question","year":2011,"lang":"en","type":"letter","venue":"Pediatric Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Medicine; Sick child; Transplantation; Citation; New england; Library science; Gerontology; Family medicine; Pediatrics; Surgery; Law; Political science","score_opus":0.035279808511162324,"score_gpt":0.2870893063312704,"score_spread":0.2518094978201081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015106651","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7016653,0.00054612366,0.0054155085,0.2818304,0.0014909526,0.0049099387,0.0031937703,0.0003526549,0.0005953973],"genre_scores_gemma":[0.5396919,0.0121376505,0.0011110979,0.43046167,0.008863294,0.0005563857,0.0016947202,0.00018623023,0.0052970164],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99488485,0.0003010145,0.0009262583,0.0013035417,0.0016451707,0.00093917747],"domain_scores_gemma":[0.99764144,0.0004538251,0.00027482657,0.0008751046,0.0003921861,0.00036258876],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006421718,0.0008150102,0.0007903336,0.0007895907,0.00030403596,0.000108133325,0.0004374613,0.0010982058,0.0012115969],"category_scores_gemma":[0.00008925911,0.0005665303,0.00038179423,0.0014392629,0.00006826285,0.000295482,0.000023469376,0.001749021,0.0004650796],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.024324095,0.0003802916,0.32190132,0.017830329,0.0002167996,0.005535633,0.030764416,0.000006744256,0.00013666628,0.000020459893,0.5973829,0.0015003262],"study_design_scores_gemma":[0.002167336,0.0021562735,0.94967335,0.00019745587,0.008204487,0.00040730057,0.00014624574,0.0000034537413,0.0015732418,0.00003213178,0.034017608,0.0014210999],"about_ca_topic_score_codex":0.00027317074,"about_ca_topic_score_gemma":0.00066236645,"teacher_disagreement_score":0.62777203,"about_ca_system_score_codex":0.00019835145,"about_ca_system_score_gemma":0.0005700855,"threshold_uncertainty_score":0.99970144},"labels":[],"label_agreement":null},{"id":"W2015803217","doi":"10.1007/s00520-010-1022-7","title":"Posaconazole versus fluconazole or itraconazole for prevention of invasive fungal infections in patients undergoing intensive cytotoxic therapy for acute myeloid leukemia or myelodysplasia: a cost effectiveness analysis","year":2010,"lang":"en","type":"article","venue":"Supportive Care in Cancer","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"Merck Canada","keywords":"Posaconazole; Medicine; Fluconazole; Population; Intensive care medicine; Itraconazole; Randomized controlled trial; Cost effectiveness; Neutropenia; Internal medicine; Environmental health; Antifungal; Chemotherapy","score_opus":0.02939816840103088,"score_gpt":0.3707821799644576,"score_spread":0.34138401156342674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015803217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99268645,0.00011902339,0.0005315093,0.000073432246,0.0005968302,0.004820766,0.0010809465,0.000023817423,0.00006725087],"genre_scores_gemma":[0.9961808,0.0003379115,0.00019096123,0.00011534545,0.00008029074,0.0022886898,0.0006187531,0.00004108866,0.00014620581],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99788594,0.00009965995,0.00063434005,0.0006322319,0.000268561,0.0004792583],"domain_scores_gemma":[0.99558055,0.0015989988,0.00035769932,0.00032060142,0.0020174938,0.0001246661],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00032227117,0.00031594306,0.00092491455,0.00048418946,0.00010322257,0.000016869997,0.000121238125,0.00028207697,0.00021155777],"category_scores_gemma":[0.0014463234,0.00025527913,0.00044737253,0.00096644915,0.00017332853,0.0002954349,0.000040088715,0.0003954543,0.0000016919236],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.063138545,0.00048512328,0.89730406,0.0007051525,0.0018528932,0.000022927587,0.0016306926,0.00016233507,0.025723003,0.000042864922,0.00008640487,0.00884602],"study_design_scores_gemma":[0.023660561,0.004954036,0.8816039,0.00042174142,0.0010945624,0.0000023745865,0.004702481,0.000115495284,0.082914434,0.000053596043,0.00016715554,0.00030968632],"about_ca_topic_score_codex":0.00027962745,"about_ca_topic_score_gemma":0.08778848,"teacher_disagreement_score":0.08750885,"about_ca_system_score_codex":0.0013476183,"about_ca_system_score_gemma":0.0028238066,"threshold_uncertainty_score":0.9999899},"labels":[],"label_agreement":null},{"id":"W2016545820","doi":"10.3109/13693786.2010.547880","title":"Prevalent nosocomial clusters among causative agents for candidemia in Hamilton, Canada","year":2011,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hamilton Regional Laboratory Medicine Program; McMaster University","funders":"","keywords":"Candida parapsilosis; Incidence (geometry); Candida tropicalis; Genotype; Intensive care unit; Medical microbiology; Intensive care; Corpus albicans; Biology; Candida glabrata; Candida albicans; Microbiology; Molecular epidemiology; Medicine; Internal medicine; Intensive care medicine; Genetics; Gene","score_opus":0.03781388086777324,"score_gpt":0.3006554455581472,"score_spread":0.26284156469037395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016545820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99435973,0.000063366046,0.00027778052,0.0008958641,0.0005395951,0.00088437623,0.000017992435,0.000015239129,0.0029460497],"genre_scores_gemma":[0.9950414,0.00003882772,0.00016934134,0.0029997244,0.00012500868,0.0001271564,0.000022931456,0.000012736849,0.0014629085],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99829763,0.0001249334,0.0004153196,0.00033410272,0.00037461892,0.00045340817],"domain_scores_gemma":[0.99891496,0.00034568718,0.00007505586,0.00020130085,0.00007734474,0.000385645],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005492724,0.00013726948,0.00044786738,0.000055525146,0.000049785936,0.0000015542539,0.00013601866,0.00027002592,0.0015952573],"category_scores_gemma":[0.0015459006,0.00011154105,0.000068594156,0.00010276306,0.00028634336,0.00002712995,0.000039810948,0.0003483004,0.000006227808],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000975494,0.00017567417,0.9645405,0.00016279948,0.00005665908,0.00044107932,0.0014192736,4.7125437e-7,0.000046192083,0.00011472627,0.030991277,0.0010759023],"study_design_scores_gemma":[0.0026051297,0.00037078062,0.9876458,0.0000981052,0.000049700615,0.000013026281,0.00032920353,0.00028444943,0.00019828363,0.00011713268,0.008175221,0.00011318],"about_ca_topic_score_codex":0.2874741,"about_ca_topic_score_gemma":0.9150376,"teacher_disagreement_score":0.6275635,"about_ca_system_score_codex":0.0005234274,"about_ca_system_score_gemma":0.001489874,"threshold_uncertainty_score":0.9993174},"labels":[],"label_agreement":null},{"id":"W2016690997","doi":"10.1002/yea.1048","title":"Isolation and characterization of <i>Candida albicans</i> homologue of <i>RAP1</i>, a repressor and activator protein gene in <i>Saccharomyces cerevisiae</i>.","year":2003,"lang":"en","type":"article","venue":"Yeast","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Saccharomyces cerevisiae; Activator (genetics); Candida albicans; Open reading frame; Gene; Repressor; Genetics; Homology (biology); DNA; Peptide sequence; Molecular biology; Gene expression","score_opus":0.00992442779629331,"score_gpt":0.2354077217904621,"score_spread":0.22548329399416878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016690997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985289,0.0002978086,0.00020635217,0.000093623275,0.000013811685,0.000448079,0.000035237466,0.000007235902,0.00036892845],"genre_scores_gemma":[0.99907434,0.00014872069,0.00054836046,0.00003979501,0.000013803842,0.000015319869,0.000020197149,0.000008789759,0.00013068895],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992441,0.000047358146,0.0002749925,0.0002118175,0.0001168732,0.00010484002],"domain_scores_gemma":[0.99954426,0.000018674735,0.00014739449,0.00017731567,0.00006157435,0.000050785595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019381566,0.00008890315,0.00028978754,0.00005965615,0.000018730367,0.000004991539,0.0000242666,0.000069003596,0.000035867582],"category_scores_gemma":[0.00011260418,0.0000782069,0.000025675363,0.0001506014,0.00010150802,0.00010789733,0.000013050209,0.00007591217,4.243388e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020501878,0.000071938535,0.23779672,0.00021355739,0.00000974288,0.0000029262965,0.00016611161,6.813294e-8,0.76057273,0.00015351316,0.000003008313,0.00080465595],"study_design_scores_gemma":[0.00087626145,0.00013954555,0.6216525,0.00022373881,0.000022083213,0.000011535461,0.000090656795,0.000018226441,0.37659284,0.00006596185,0.00023803739,0.00006863444],"about_ca_topic_score_codex":0.000058080794,"about_ca_topic_score_gemma":0.000020124286,"teacher_disagreement_score":0.3839799,"about_ca_system_score_codex":0.000013298452,"about_ca_system_score_gemma":0.000052852807,"threshold_uncertainty_score":0.31891847},"labels":[],"label_agreement":null},{"id":"W2016695891","doi":"10.1097/lbr.0000000000000002","title":"Ulcerative Tracheobronchitis Due to Aspergillus","year":2013,"lang":"en","type":"article","venue":"Journal of Bronchology & Interventional Pulmonology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Exacerbation; Aspergillosis; Intensive care medicine; Aspergillus; Intensive care unit; Allergic bronchopulmonary aspergillosis; Tracheitis; Bronchoscopy; Dermatology; Bronchitis; Internal medicine; Surgery; Immunology; Microbiology","score_opus":0.016874724155708065,"score_gpt":0.3016416466843404,"score_spread":0.28476692252863234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016695891","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9756832,0.0005921902,0.006972046,0.012209933,0.00065791805,0.00028890852,0.0000062112344,0.000016275812,0.0035733061],"genre_scores_gemma":[0.991292,0.000017587292,0.0031231763,0.0018878843,0.00038775965,0.000016223672,0.000007997324,0.000017616325,0.0032497623],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99791044,0.00021418404,0.0009815223,0.00028498663,0.00025430712,0.00035455133],"domain_scores_gemma":[0.99820703,0.00014492734,0.00037713916,0.00024568036,0.0007366396,0.00028855455],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00047656347,0.00018463828,0.00069854065,0.00030739026,0.00006807964,0.000018302084,0.00022492006,0.0002447398,0.006807239],"category_scores_gemma":[0.00044179734,0.00015120569,0.000590465,0.00015548107,0.00026535706,0.00023478897,0.00006877091,0.00065586716,0.00066237565],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00923996,0.008700551,0.30645734,0.00036404704,0.0038160165,0.0074438807,0.0019728516,0.00010829706,0.15497938,0.024216253,0.22869699,0.25400445],"study_design_scores_gemma":[0.0013904211,0.0038682974,0.9774197,0.000118347525,0.000093410985,0.006223507,0.00027617873,0.000016805549,0.0010400602,0.0050490145,0.004373869,0.00013039164],"about_ca_topic_score_codex":0.000074770665,"about_ca_topic_score_gemma":0.00008010046,"teacher_disagreement_score":0.6709624,"about_ca_system_score_codex":0.000223401,"about_ca_system_score_gemma":0.00014528428,"threshold_uncertainty_score":0.9941007},"labels":[],"label_agreement":null},{"id":"W2016941338","doi":"10.1097/00004728-200401000-00002","title":"Aspergillus Infection of the Airways","year":2004,"lang":"en","type":"article","venue":"Journal of Computer Assisted Tomography","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Hospital and Health Sciences Centre; University of British Columbia Hospital","funders":"","keywords":"Medicine; Aspergillus; Aspergillosis; Aspergillus fumigatus; Computed tomography; Airway; Pathology; Microbiology; Immunology; Radiology; Surgery; Biology","score_opus":0.012420217492067271,"score_gpt":0.25098623277048593,"score_spread":0.23856601527841867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016941338","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9816004,0.00032430136,0.01585679,0.0006287175,0.0006470115,0.00010393313,0.0000015167149,0.000011707499,0.0008256307],"genre_scores_gemma":[0.9960195,0.000055608067,0.0034199823,0.00022199137,0.00025541056,3.9249932e-7,4.7614236e-7,0.000007652989,0.000019026404],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988071,0.000052600935,0.0004999634,0.00009299826,0.00042442765,0.000122911],"domain_scores_gemma":[0.9988178,0.00003538831,0.00039996734,0.00024680534,0.00041218987,0.000087849636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027697545,0.00010067954,0.00032232085,0.00021104908,0.000060303406,0.000011788443,0.00011614939,0.00007336764,0.000018079525],"category_scores_gemma":[0.000030610034,0.000059434587,0.0007078835,0.00060700416,0.00012954054,0.0000980016,0.00002897947,0.00029742,0.0000013711541],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044714267,0.00087627885,0.9630822,0.00016569751,0.0003892575,0.000052184354,0.00035458547,0.00038786983,0.009168285,0.00038006037,0.0011673534,0.023529088],"study_design_scores_gemma":[0.0014073632,0.0006464208,0.99122155,0.00037735197,0.00013274519,0.0002535256,0.000011862297,0.000019164505,0.0038260317,0.0004234592,0.0016239659,0.000056568446],"about_ca_topic_score_codex":0.000020878239,"about_ca_topic_score_gemma":0.000018246694,"teacher_disagreement_score":0.028139345,"about_ca_system_score_codex":0.000054700628,"about_ca_system_score_gemma":0.00014849487,"threshold_uncertainty_score":0.24236722},"labels":[],"label_agreement":null},{"id":"W2017784145","doi":"10.1139/w11-025","title":"Cdr2p contributes to fluconazole resistance in <i>Candida dubliniensis</i> clinical isolates","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Fluconazole; Microbiology; Candida dubliniensis; Biology; Ergosterol; Efflux; ATP-binding cassette transporter; Azole; Sterol; Lanosterol; Transporter; Antifungal; Biochemistry; Gene; Corpus albicans","score_opus":0.035233356669842675,"score_gpt":0.2870328032937352,"score_spread":0.25179944662389253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017784145","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912872,0.0034989254,0.0001032061,0.0022284924,0.00060924096,0.00017537878,0.000044363285,0.0000041716094,0.002049033],"genre_scores_gemma":[0.99378765,0.000077696066,0.0010915655,0.004285302,0.00010585206,0.000001216707,0.000006413573,0.000011843653,0.000632472],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99823475,0.00014145316,0.0009067272,0.0002207749,0.000030700376,0.0004656186],"domain_scores_gemma":[0.9983916,0.0001548794,0.0001875004,0.00023501203,0.00038730475,0.0006436946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010593001,0.00013374693,0.00064520305,0.0003400722,0.000053295826,0.000009458998,0.00020223628,0.00022604366,0.00029982167],"category_scores_gemma":[0.0009900638,0.00011233732,0.0001771318,0.00025720734,0.00029670054,0.000054742748,0.00001387713,0.00046713933,0.000059785914],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011643426,0.00007160612,0.942536,0.000021588981,0.0000855103,0.0006391856,0.00048458116,2.1331273e-7,0.021630516,0.00046456617,0.03241749,0.00048438142],"study_design_scores_gemma":[0.0026321937,0.0006823123,0.82230335,0.0003252285,0.00006819818,0.00025986478,0.0003891777,5.574884e-7,0.0050888304,0.00075795857,0.16730702,0.00018531948],"about_ca_topic_score_codex":0.0012625986,"about_ca_topic_score_gemma":0.21791777,"teacher_disagreement_score":0.21665516,"about_ca_system_score_codex":0.00017873972,"about_ca_system_score_gemma":0.0018250722,"threshold_uncertainty_score":0.7963532},"labels":[],"label_agreement":null},{"id":"W2018214462","doi":"10.1080/003655401317074644","title":"Sputum Isolation of Wangiella dermatitidis in Patients with Cystic Fibrosis","year":2001,"lang":"en","type":"article","venue":"Scandinavian Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta","funders":"","keywords":"Cystic fibrosis; Sputum; Medicine; Voriconazole; Amphotericin B; Isolation (microbiology); Population; Internal medicine; Pathology; Microbiology; Antifungal; Biology; Dermatology; Tuberculosis","score_opus":0.004467539372466396,"score_gpt":0.228042861379982,"score_spread":0.22357532200751562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018214462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979125,0.0004004847,0.0008210265,0.000042941014,0.00007141405,0.00015803146,0.000016131538,0.000008197624,0.00056923286],"genre_scores_gemma":[0.9996693,0.00007671061,0.00010714204,0.000036891786,0.00005251262,0.0000012377945,0.000010256974,0.000010706162,0.000035249304],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989757,0.000051610943,0.00041367393,0.00009601658,0.00030850552,0.00015448325],"domain_scores_gemma":[0.99902487,0.0000625811,0.00029582792,0.00013146993,0.0003303417,0.00015490963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009284546,0.000107545566,0.00033256703,0.0002192134,0.000039049748,0.000011480197,0.00004604794,0.0000391331,0.00013187571],"category_scores_gemma":[0.0001881651,0.00007823593,0.00012573252,0.0003248726,0.000078954195,0.00018696053,0.0000081668295,0.00011559796,0.0000032041098],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015549029,0.0005695332,0.99580646,0.00012849837,0.000046535566,0.000049286624,0.00009365933,0.000045496403,0.00009895672,0.000009896114,0.00013294465,0.0014638269],"study_design_scores_gemma":[0.0027892613,0.0015294402,0.9941941,0.0008122518,0.00015743937,0.000038366914,0.00009583387,0.000018172474,0.00008445046,0.00018523677,0.000018491608,0.00007694137],"about_ca_topic_score_codex":0.000026312671,"about_ca_topic_score_gemma":0.000034910845,"teacher_disagreement_score":0.0017567525,"about_ca_system_score_codex":0.00013779389,"about_ca_system_score_gemma":0.00011976803,"threshold_uncertainty_score":0.31903684},"labels":[],"label_agreement":null},{"id":"W2018982307","doi":"10.1097/01253092-200603001-00096","title":"Antibiotics Administration and Risk of Fungal Infection in Burns","year":2006,"lang":"en","type":"article","venue":"Journal of Burn Care & Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Antibiotics; Medicine; Colonization; Incidence (geometry); Prospective cohort study; Risk factor; Internal medicine; Microbiology; Biology","score_opus":0.03230217601388959,"score_gpt":0.3794268874616062,"score_spread":0.3471247114477166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018982307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99667287,0.0016440707,0.00011352989,0.00012342985,0.00004824759,0.00013201273,0.000006061715,0.0000023530472,0.0012574552],"genre_scores_gemma":[0.99745,0.0020384637,0.0001772119,0.0000033541555,0.00019947652,1.2460885e-7,0.0000027409806,0.0000064863507,0.00012212366],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99841267,0.00018805402,0.00045099694,0.000104019135,0.0006656953,0.00017858268],"domain_scores_gemma":[0.9983684,0.00015212965,0.00017205914,0.00012380665,0.0011051309,0.00007851516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016650023,0.00006301478,0.00024851106,0.00032916054,0.00005328502,0.000020152916,0.00004216711,0.00009734982,0.000019306179],"category_scores_gemma":[0.00045830166,0.00004966171,0.00008110564,0.00033431244,0.00018121436,0.00010681142,0.000019862453,0.00065038516,0.0000012834028],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000623133,0.0001595136,0.983974,0.00022618011,0.000016877624,0.00013452036,0.0002695875,0.0000112628595,0.010670929,0.00007535249,0.00017641408,0.0036622481],"study_design_scores_gemma":[0.00086655916,0.0013923382,0.9801107,0.000248464,0.000034237153,0.000090474496,0.0012015499,0.00003927403,0.015462366,0.00023004037,0.00028567732,0.000038341193],"about_ca_topic_score_codex":0.00056093675,"about_ca_topic_score_gemma":0.0015738358,"teacher_disagreement_score":0.0047914376,"about_ca_system_score_codex":0.00014283042,"about_ca_system_score_gemma":0.00034989233,"threshold_uncertainty_score":0.28256363},"labels":[],"label_agreement":null},{"id":"W2019541944","doi":"10.1016/j.bbamcr.2005.11.016","title":"Expression levels and subcellular localization of Bcy1p in Candida albicans mutant strains devoid of one BCY1 allele results in a defective morphogenetic behavior","year":2005,"lang":"en","type":"article","venue":"Biochimica et Biophysica Acta (BBA) - Molecular Cell Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Agencia Nacional de Promoción Científica y Tecnológica; Canadian Institutes of Health Research; Consejo Nacional de Investigaciones Científicas y Técnicas; Fundación Antorchas","keywords":"Green fluorescent protein; Protein subunit; Mutant; Subcellular localization; Biology; Candida albicans; Protein kinase A; Allele; Molecular biology; Saccharomyces cerevisiae; Biochemistry; Cell biology; Genetics; Gene; Kinase","score_opus":0.04845730278260726,"score_gpt":0.34004952066564587,"score_spread":0.29159221788303863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019541944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969628,0.0004817995,0.00034064506,0.00030399783,0.0000084751555,0.0012678846,0.00013974583,0.000011305974,0.00048333427],"genre_scores_gemma":[0.99854755,0.00031074064,0.0008001514,0.000034336157,0.00002128577,0.000054012653,0.00012199172,0.000043205066,0.000066745924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963003,0.0005930687,0.0007640318,0.0007426772,0.0010264332,0.00057348347],"domain_scores_gemma":[0.9984365,0.00015388448,0.0001833736,0.000668138,0.00034498383,0.0002131102],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010953491,0.00025800723,0.00059783604,0.00051953655,0.00005845886,0.000018126577,0.00022848265,0.00024035691,0.00003320571],"category_scores_gemma":[0.0002943159,0.00024704097,0.00013140564,0.0009737354,0.00061612466,0.00008527952,0.00017455692,0.00055679755,0.0000035146559],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001223029,0.0018039063,0.0012198584,0.00031270506,0.000027053911,0.00007920153,0.0016090096,0.00006159558,0.99312127,0.000029415802,0.00001363723,0.0004993255],"study_design_scores_gemma":[0.0024327745,0.0006982011,0.09630606,0.00036588352,0.000048154932,0.0000022278239,0.00049546093,0.0007722543,0.8986209,0.000057381192,0.000016299682,0.00018439096],"about_ca_topic_score_codex":0.0009942068,"about_ca_topic_score_gemma":0.0008121594,"teacher_disagreement_score":0.09508621,"about_ca_system_score_codex":0.00022496839,"about_ca_system_score_gemma":0.0004937045,"threshold_uncertainty_score":0.9999982},"labels":[],"label_agreement":null},{"id":"W2019892034","doi":"10.1371/journal.ppat.1002718","title":"Global Analysis of the Evolution and Mechanism of Echinocandin Resistance in Candida glabrata","year":2012,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":197,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University Health Network; Mount Sinai Hospital; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Burroughs Wellcome Fund; University of Toronto; Center for AIDS Research, University of Washington; Center for AIDS Research, Duke University; National Institutes of Health","keywords":"Echinocandin; Echinocandins; Caspofungin; Candida glabrata; Biology; Drug resistance; Calcineurin; Antifungal drug; Microbiology; Resistance mutation; Candida albicans; Genetics; Fluconazole; Medicine; Gene; Antifungal; Transplantation; Polymerase chain reaction; Reverse transcriptase","score_opus":0.015451819703556434,"score_gpt":0.25784917219284964,"score_spread":0.2423973524892932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019892034","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963432,0.0014035685,0.000355868,0.00006627205,0.000032805554,0.00018157651,0.00021779224,0.000005900067,0.0013929944],"genre_scores_gemma":[0.9994724,0.000036464968,0.00032447287,0.000027610626,0.000015896338,0.0000032030484,0.000008169715,0.000004015828,0.000107759406],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99907494,0.00007524999,0.0002652576,0.0001510575,0.00025453445,0.00017896177],"domain_scores_gemma":[0.99934816,0.00003614717,0.000114489056,0.00036995002,0.00006502644,0.000066199806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030725292,0.00008248454,0.00034282252,0.000065796805,0.000031090323,0.0000018977853,0.000066452165,0.000066349894,0.000026618161],"category_scores_gemma":[0.0001733187,0.000057292833,0.00010717601,0.0009534675,0.000090744885,0.00005007859,0.000040362727,0.00006381852,4.983839e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011950523,0.00017825946,0.959181,0.00009040143,0.00016957252,0.0000014320393,0.000310689,0.0000010087775,0.029440504,0.010458282,0.000013844388,0.00003546839],"study_design_scores_gemma":[0.00027474447,0.000026003909,0.9946194,0.0000757464,0.00094856566,6.545847e-7,0.00031155994,0.0001830059,0.0027677482,0.00073720486,0.0000054341135,0.000049911225],"about_ca_topic_score_codex":0.0002846941,"about_ca_topic_score_gemma":0.008318862,"teacher_disagreement_score":0.03543839,"about_ca_system_score_codex":0.00014556812,"about_ca_system_score_gemma":0.000085683045,"threshold_uncertainty_score":0.464212},"labels":[],"label_agreement":null},{"id":"W2020273514","doi":"10.1159/000239017","title":"In vitro Activity of Amphotericin B, Hamycin and Their Novel Water-Soluble Compounds against Pathogenic Yeasts","year":2009,"lang":"en","type":"article","venue":"Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta","funders":"","keywords":"Amphotericin B; Microbiology; Cryptococcus neoformans; Candida parapsilosis; Corpus albicans; Cryptococcus; Candida albicans; In vitro; Trichosporon; Chemistry; Biology; Yeast; Antifungal; Biochemistry","score_opus":0.014850645358816361,"score_gpt":0.25957995178271637,"score_spread":0.2447293064239,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020273514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99725145,0.00019565377,0.0003053409,0.0010868172,0.000044021064,0.00022824654,0.000008325084,0.000020969412,0.0008591943],"genre_scores_gemma":[0.99751836,0.00018897094,0.00035063442,0.0014670811,0.000045678236,0.0000024249812,0.000010631536,0.000013960694,0.0004022668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991608,0.000019977999,0.0002009217,0.00025904507,0.000115850744,0.00024336122],"domain_scores_gemma":[0.99951637,0.000026163694,0.00004872172,0.00029433696,0.00004019021,0.00007424132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020132436,0.00015801337,0.00041893355,0.00006376134,0.000027594198,0.000008671774,0.00006399929,0.00009150145,0.000024349858],"category_scores_gemma":[0.000010959936,0.0001070554,0.000084545594,0.000115352,0.0000914129,0.000084441795,0.000011396473,0.00013829774,0.0000025377008],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014450385,0.00048266476,0.0028855302,0.0000448063,0.000015002866,0.0000053576773,0.00078844617,3.691013e-7,0.97147906,0.0000039294173,0.000090996175,0.022758827],"study_design_scores_gemma":[0.0024497698,0.00014822527,0.17851165,0.000044148117,0.000004310803,0.0000069805023,0.00007110167,0.00018438757,0.81765085,0.00008937635,0.0007400685,0.00009910102],"about_ca_topic_score_codex":0.000032822645,"about_ca_topic_score_gemma":0.000014948836,"teacher_disagreement_score":0.17562613,"about_ca_system_score_codex":0.00006174276,"about_ca_system_score_gemma":0.000038914764,"threshold_uncertainty_score":0.43655926},"labels":[],"label_agreement":null},{"id":"W2020792435","doi":"10.1111/j.1365-2958.2009.07038.x","title":"Forward genetics in <i>Candida albicans</i> that reveals the Arp2/3 complex is required for hyphal formation, but not endocytosis","year":2010,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; McGill University; Université de Montréal; Biotechnology Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Biology; Cell biology; Candida albicans; Endocytosis; Mutant; Saccharomyces cerevisiae; Internalization; Genetic screen; Hypha; Actin; Yeast; Genetics; Gene; Microbiology; Cell","score_opus":0.028200029292973626,"score_gpt":0.28493147364409976,"score_spread":0.25673144435112616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020792435","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98948276,0.00026673183,0.0042295833,0.004106081,0.0001556154,0.0010483937,0.0003599017,0.000024413732,0.00032653616],"genre_scores_gemma":[0.9850894,0.000062694045,0.0025990468,0.011417195,0.00006103413,0.00006709497,0.00033556216,0.000024636262,0.0003433402],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99857265,0.000094122406,0.000415127,0.0003696328,0.00008301754,0.00046545194],"domain_scores_gemma":[0.9989018,0.00014421677,0.00013110167,0.000598901,0.0001436178,0.000080382735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034436144,0.00020282442,0.0004247928,0.00007280367,0.000111059984,0.000017414164,0.00024483856,0.0002241437,0.00013072313],"category_scores_gemma":[0.0001597183,0.00014796002,0.00021237231,0.00012471783,0.00029590094,0.00004160144,0.00006917538,0.00029287545,0.000019393738],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029387866,0.000071087656,0.010013014,0.00006380385,0.000040607345,0.000014214876,0.00021223532,7.824191e-7,0.9833999,0.00017098957,0.004682178,0.0010372661],"study_design_scores_gemma":[0.0023997666,0.0002714156,0.023997672,0.000031657433,0.00010675977,0.0001948497,0.00024524063,0.00009979901,0.88434494,0.0005171056,0.087552235,0.00023857824],"about_ca_topic_score_codex":0.000045410037,"about_ca_topic_score_gemma":0.0004927425,"teacher_disagreement_score":0.09905502,"about_ca_system_score_codex":0.00005618293,"about_ca_system_score_gemma":0.00008123331,"threshold_uncertainty_score":0.60336345},"labels":[],"label_agreement":null},{"id":"W2021130708","doi":"10.1128/jcm.41.7.3423-3426.2003","title":"Isolation of <i>Candida dubliniensis</i> in an Aboriginal Community in Ontario, Canada","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; McMaster University; Genome Canada; Ontario Innovation Trust","keywords":"Candida dubliniensis; Isolation (microbiology); Genotype; Indigenous; Biology; Microbiology; Candida albicans; Genetics; Gene; Ecology","score_opus":0.04624487863431618,"score_gpt":0.37631685123193076,"score_spread":0.33007197259761456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021130708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987555,0.0000827566,0.000031955184,0.00019433616,0.0003796764,0.00007749563,0.0000047586914,9.922126e-7,0.00047251675],"genre_scores_gemma":[0.99818003,0.000038470243,0.0010166666,0.00065508264,0.00003472496,2.4795517e-7,0.000007618957,0.0000043384675,0.000062830884],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972601,0.00072838424,0.0016692424,0.00010329034,0.00006440842,0.00017456402],"domain_scores_gemma":[0.9981485,0.00070231874,0.00054471043,0.00021241306,0.00027949037,0.00011254057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031252557,0.00008655773,0.00079312595,0.000093236195,0.000020227997,0.00000235165,0.00011134456,0.0001848467,0.00015519206],"category_scores_gemma":[0.0010488067,0.00006809766,0.000116460455,0.00013646384,0.00014749922,0.00007207591,0.000008400346,0.0014745463,6.1773306e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001345976,0.00061130006,0.9782983,0.000015770369,0.000017545728,0.00004825193,0.00013632783,0.000009793443,0.018915894,0.000060544357,0.0003691294,0.00017115108],"study_design_scores_gemma":[0.002797791,0.0012080526,0.987932,0.00009664638,0.000022355707,0.00009495392,0.00030989532,0.0000038614407,0.0005474299,0.00014531454,0.0067837858,0.00005787985],"about_ca_topic_score_codex":0.55014586,"about_ca_topic_score_gemma":0.99580437,"teacher_disagreement_score":0.44565853,"about_ca_system_score_codex":0.00024043172,"about_ca_system_score_gemma":0.004071678,"threshold_uncertainty_score":0.7222982},"labels":[],"label_agreement":null},{"id":"W2021266743","doi":"10.1097/inf.0b013e3181462a4b","title":"DIAGNOSIS AND TREATMENT OF CUTANEOUS ZYGOMYCOSIS","year":2007,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Zygomycosis; Medicine; Debridement (dental); Surgical debridement; Pharmacotherapy; Surgery; Dermatology; Biopsy; Amphotericin B; Radiology; Antifungal; Internal medicine","score_opus":0.013914226122552314,"score_gpt":0.2786172786749016,"score_spread":0.26470305255234927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021266743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99413645,0.0043406654,0.00013630881,0.0002758135,0.00014839413,0.0002461484,0.000009758214,0.000021993204,0.00068444887],"genre_scores_gemma":[0.9810767,0.017746232,0.00003624512,0.0000873395,0.00089038926,0.000006001046,9.472089e-7,0.00001172097,0.0001444227],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99901813,0.00004478781,0.00031162982,0.00012634629,0.00025925142,0.00023986753],"domain_scores_gemma":[0.9987811,0.00036496317,0.00015041305,0.00019892494,0.00013138879,0.00037324536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002912989,0.00012820924,0.0002333189,0.0001226132,0.0002194137,0.00001855743,0.000041586878,0.000042027015,0.00013791559],"category_scores_gemma":[0.00024314893,0.00007455808,0.00019087578,0.00020511523,0.00008896613,0.00004312803,0.000013665835,0.0001319677,0.000009016777],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005260242,0.0005821737,0.984798,0.000045877056,0.00006818601,0.00028583093,0.00018505577,0.0000038752537,0.000036174188,0.000021279127,0.0002678135,0.013179671],"study_design_scores_gemma":[0.0010031163,0.0007333522,0.99487597,0.000014188174,0.0010957061,0.0010288331,0.00010669714,0.000011413196,0.00008349976,0.0004837718,0.00047770172,0.00008577926],"about_ca_topic_score_codex":0.00003690008,"about_ca_topic_score_gemma":0.000029677514,"teacher_disagreement_score":0.013405567,"about_ca_system_score_codex":0.00014442671,"about_ca_system_score_gemma":0.00016287564,"threshold_uncertainty_score":0.30403903},"labels":[],"label_agreement":null},{"id":"W2021312311","doi":"10.1021/tx0002029","title":"Identification of a Reactive Metabolite of Terbinafine:  Insights into Terbinafine-Induced Hepatotoxicity","year":2001,"lang":"en","type":"article","venue":"Chemical Research in Toxicology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":172,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Metabolite; Glutathione; Chemistry; Terbinafine; Microsome; Biochemistry; Toxicity; Conjugate; Pharmacology; Enzyme; Biology; Organic chemistry","score_opus":0.08021007824756986,"score_gpt":0.42065566610266464,"score_spread":0.34044558785509477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021312311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99645567,0.00040232,0.00004705537,0.0007694923,0.000046744193,0.0006297761,0.000003518704,0.000015194704,0.0016302445],"genre_scores_gemma":[0.9992162,0.00026835556,0.00012930247,0.000038916492,0.0000572359,0.00007538223,0.000015653812,0.000015481077,0.00018347253],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971563,0.00033078622,0.00085075444,0.00051199325,0.00066903455,0.00048113812],"domain_scores_gemma":[0.99761754,0.0006809359,0.00017448243,0.0006332034,0.0006968864,0.00019697128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015411098,0.00015045748,0.0006800649,0.00046203326,0.00003772316,0.0000056170893,0.00027660633,0.0003464265,0.00006672906],"category_scores_gemma":[0.003614228,0.0001298642,0.00013164573,0.0012227143,0.00072979263,0.000113290414,0.0001662235,0.0007616856,0.000017207984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001534795,0.0011314384,0.05419463,0.00028528867,0.00003358139,0.00006615197,0.0005012892,1.7177346e-7,0.9381632,0.0012442237,0.000038571558,0.0028066628],"study_design_scores_gemma":[0.0009911731,0.00037217478,0.12028323,0.00009752092,0.000015615093,0.00000989754,0.0002556792,0.00016346709,0.87327623,0.0042503597,0.00020299906,0.000081629376],"about_ca_topic_score_codex":0.0002333833,"about_ca_topic_score_gemma":0.00008773528,"teacher_disagreement_score":0.0660886,"about_ca_system_score_codex":0.0003227917,"about_ca_system_score_gemma":0.00035945512,"threshold_uncertainty_score":0.5295709},"labels":[],"label_agreement":null},{"id":"W2021383713","doi":"10.1021/np2001573","title":"Isolation, Structure, and Biological Activities of Fellutamides C and D from an Undescribed <i>Metulocladosporiella</i> (Chaetothyriales) Using the Genome-Wide <i>Candida albicans</i> Fitness Test","year":2011,"lang":"en","type":"article","venue":"Journal of Natural Products","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Merck Canada Inc. (Canada)","funders":"","keywords":"Candida albicans; Isolation (microbiology); Biology; Genome; Microbiology; Genetics; Gene","score_opus":0.04075803756542545,"score_gpt":0.2660830143471947,"score_spread":0.22532497678176927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021383713","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99346346,0.0054899417,0.00010839784,0.00043887313,0.00023574631,0.00020329688,0.000034767716,0.0000070636856,0.000018450975],"genre_scores_gemma":[0.99605083,0.00040933033,0.0028776021,0.00021632832,0.00039389223,2.315332e-7,0.0000072684243,0.000011679517,0.000032804965],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987949,0.00010972258,0.00044811182,0.00023707852,0.00024084456,0.00016934701],"domain_scores_gemma":[0.99861,0.00028823927,0.0004362259,0.00023211601,0.0003380725,0.0000953401],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039833967,0.00016918236,0.00046384777,0.00006626412,0.00011420574,0.000023725364,0.00011558092,0.0001003068,0.000027130476],"category_scores_gemma":[0.000842385,0.00009267984,0.000055799148,0.00017649081,0.000544252,0.00032004743,0.000043146716,0.00039194632,7.1651904e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012369468,0.00008088988,0.49746752,0.000057707337,0.00008604652,0.00002144922,0.0013636078,0.0000016004188,0.4988709,0.00002842018,0.000030622934,0.0007542745],"study_design_scores_gemma":[0.0008725003,0.00062477903,0.9157871,0.00009794756,0.00018439263,0.00016629043,0.0013464154,0.000055820794,0.078711264,0.0019228377,0.00008952183,0.00014115545],"about_ca_topic_score_codex":0.00014662275,"about_ca_topic_score_gemma":0.000063760315,"teacher_disagreement_score":0.42015964,"about_ca_system_score_codex":0.000038954433,"about_ca_system_score_gemma":0.00015086544,"threshold_uncertainty_score":0.37793744},"labels":[],"label_agreement":null},{"id":"W2022304938","doi":"10.1016/j.micres.2007.02.001","title":"The effect of prostaglandin E2 on transcriptional responses of Candida albicans","year":2007,"lang":"en","type":"article","venue":"Microbiological Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Regulon; Biology; Candida albicans; Reporter gene; Transcription factor; Transcriptional regulation; Psychological repression; Cell biology; Repressor; Mutant; Regulation of gene expression; Transcription (linguistics); Gene; Gene expression; Microbiology; Genetics","score_opus":0.06736270979378851,"score_gpt":0.41506525994284943,"score_spread":0.34770255014906093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022304938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99550015,0.0005155496,0.000026109692,0.0005918674,0.000028505514,0.0005801889,0.000053998567,0.000008861762,0.0026947618],"genre_scores_gemma":[0.99614644,0.000093196955,0.000034456152,0.000028566716,0.000034867582,0.000009956952,0.000016528506,0.0000053367103,0.00363064],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982282,0.0003991433,0.0003206414,0.00023289597,0.00038759678,0.0004315194],"domain_scores_gemma":[0.99460983,0.004750387,0.000040856998,0.00028176254,0.00022189622,0.000095278265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0070501077,0.00009457203,0.00028825196,0.00009510745,0.00015535402,0.000006093627,0.00016591843,0.00013421918,0.00020003984],"category_scores_gemma":[0.0027121606,0.000043394295,0.00014261703,0.00030115884,0.0011736276,0.000010899135,0.000033593922,0.00046707442,0.000016340044],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.02402185,0.0001061467,0.15435039,0.00007956647,0.000024805136,0.000016298234,0.000042242875,1.4087932e-7,0.81684774,0.00075194554,0.0007115436,0.0030473485],"study_design_scores_gemma":[0.0009364426,0.0067749745,0.5821532,0.00010049655,0.000008933035,0.0000067059113,0.000101579215,9.696519e-7,0.4008732,0.00007733081,0.008920738,0.000045412904],"about_ca_topic_score_codex":0.000066131055,"about_ca_topic_score_gemma":0.00012516718,"teacher_disagreement_score":0.42780283,"about_ca_system_score_codex":0.00008195219,"about_ca_system_score_gemma":0.00011409625,"threshold_uncertainty_score":0.43242797},"labels":[],"label_agreement":null},{"id":"W2022459515","doi":"10.1016/j.healun.2008.11.332","title":"325: Novel Agent To Ablate CD8+ Cardiac Allograft Vasculopathy","year":2009,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Cordyceps; CD8; Cytotoxic T cell; Medicine; Pharmacology; Cancer research; Biology; Immune system; Immunology; Traditional medicine; In vitro; Biochemistry","score_opus":0.01247340319738064,"score_gpt":0.2809108294241949,"score_spread":0.2684374262268142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022459515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905171,0.0010827745,0.0041474733,0.0037691246,0.000094273324,0.00017462675,0.0000061867213,0.000007228814,0.00020123301],"genre_scores_gemma":[0.99634147,0.0017198031,0.00081066776,0.00086369825,0.00012484871,4.1144003e-7,0.000003612593,0.0000045814727,0.00013088185],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992695,0.000049519876,0.00024581671,0.000070100126,0.00024062091,0.00012447475],"domain_scores_gemma":[0.999599,0.000056417797,0.00005074251,0.000093917435,0.00008997038,0.00010994703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075001316,0.000077984114,0.00021323877,0.000059945545,0.00008214523,0.000011535409,0.000038514718,0.000035716355,0.000011310447],"category_scores_gemma":[0.000012944508,0.00004734822,0.00010149987,0.000088920395,0.000023360666,0.00008128718,0.0000017624428,0.00015391217,0.000003379221],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0044494113,0.00018796357,0.057010613,0.00020405822,0.00017240395,0.000044739052,0.005869172,0.00013075744,0.9257623,0.00011938369,0.0019223832,0.0041267923],"study_design_scores_gemma":[0.0008712742,0.00057347986,0.9912573,0.00019382552,0.0005142142,0.00024963266,0.00020986861,0.000044793323,0.0047907066,0.00005853742,0.00116636,0.00006997386],"about_ca_topic_score_codex":0.00001438547,"about_ca_topic_score_gemma":0.000009139019,"teacher_disagreement_score":0.9342467,"about_ca_system_score_codex":0.000019999372,"about_ca_system_score_gemma":0.00003742191,"threshold_uncertainty_score":0.19308044},"labels":[],"label_agreement":null},{"id":"W2023335257","doi":"10.1016/j.ijid.2009.05.012","title":"Articular aspergillosis: case report and review of the literature","year":2009,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Voriconazole; Aspergillosis; Caspofungin; Medicine; Incidence (geometry); Hematopoietic stem cell transplantation; Amphotericin B; Dermatology; Pathology; Antifungal; Immunology; Disease","score_opus":0.005880356258361808,"score_gpt":0.29376408429588374,"score_spread":0.28788372803752194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023335257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9343019,0.061933935,0.000035796307,0.0028628157,0.00023534236,0.00009074495,0.000011899943,0.0000054175753,0.0005221216],"genre_scores_gemma":[0.9867682,0.011148268,0.000023762113,0.0018216735,0.0001706684,6.0500764e-7,0.0000023935058,0.000002919208,0.000061512575],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990704,0.00003773972,0.00039527068,0.00007451311,0.00036833642,0.00005375594],"domain_scores_gemma":[0.9984968,0.00003534867,0.00031530703,0.00013429327,0.0009376095,0.000080678976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017492926,0.00006636479,0.00019575343,0.00005382401,0.000027681655,0.000016510508,0.000061833554,0.000025091953,0.000043249605],"category_scores_gemma":[0.0011919435,0.000038085604,0.00023197415,0.000100706005,0.0000522495,0.00010465999,0.000014662119,0.00012200855,4.5121354e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030980151,0.00085520797,0.8858871,0.0009403886,0.0004910418,0.09123224,0.00014367334,0.000004768103,0.0015887303,0.00043741468,0.0040814574,0.014028205],"study_design_scores_gemma":[0.0007089314,0.00027180044,0.76448417,0.012120523,0.00038738613,0.21924677,0.00003923426,0.000004759721,0.00066669687,0.0009886398,0.0010165862,0.00006451496],"about_ca_topic_score_codex":0.0000037282844,"about_ca_topic_score_gemma":0.0000024015267,"teacher_disagreement_score":0.12801453,"about_ca_system_score_codex":0.000050995437,"about_ca_system_score_gemma":0.00011192787,"threshold_uncertainty_score":0.15530859},"labels":[],"label_agreement":null},{"id":"W2023925184","doi":"10.1371/journal.pone.0035106","title":"Self-Adjuvanting Glycopeptide Conjugate Vaccine against Disseminated Candidiasis","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"Alberta Innovates","keywords":"Immunogenicity; Adjuvant; Toxoid; Antibody; Immunization; Diphtheria toxin; Candida albicans; Microbiology; Glycopeptide; Biology; Immunology; Toxin; Antibiotics","score_opus":0.031205158468739884,"score_gpt":0.2561042921691194,"score_spread":0.2248991337003795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023925184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9850103,0.0012861906,0.000013182417,0.0004348176,0.00005187065,0.0004424343,0.000011528729,0.00025238562,0.012497242],"genre_scores_gemma":[0.9939481,0.00049328955,0.0027420488,0.0005218998,0.0003274099,0.000019235213,0.00006261453,0.000039711245,0.0018456734],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983215,0.0000480563,0.00035457558,0.00027434606,0.00040402904,0.0005975219],"domain_scores_gemma":[0.9988134,0.000110491164,0.0001035801,0.00043481754,0.00017608261,0.00036165823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039271679,0.00020355932,0.00051897386,0.00007181616,0.00012954716,0.000022021208,0.00009048374,0.000109685265,0.00028858866],"category_scores_gemma":[0.00045341352,0.00017375367,0.0000979371,0.00025840313,0.00003027808,0.00025931926,0.000052922744,0.0002678493,0.0003414724],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027561872,0.00246353,0.800992,0.00057631236,0.00037952833,0.000029177705,0.00056618324,7.869393e-8,0.1929028,0.000048515605,0.00062360597,0.0011426279],"study_design_scores_gemma":[0.0021441593,0.00023747479,0.674424,0.0010759357,0.0009190075,0.000008129896,0.0006903365,0.00031044992,0.31854516,0.000011830414,0.0012119041,0.00042164812],"about_ca_topic_score_codex":0.000033426157,"about_ca_topic_score_gemma":0.000032424963,"teacher_disagreement_score":0.12656805,"about_ca_system_score_codex":0.00012051393,"about_ca_system_score_gemma":0.000063556865,"threshold_uncertainty_score":0.7085469},"labels":[],"label_agreement":null},{"id":"W2024248096","doi":"10.1099/jmm.0.045112-0","title":"Prevalence and antifungal susceptibility of Candida parapsilosis complex isolates collected from oral cavities of HIV-infected individuals","year":2012,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Population and Public Health; University of Ottawa","funders":"","keywords":"Voriconazole; Itraconazole; Microbiology; Ketoconazole; Fluconazole; Biology; Candida parapsilosis; Amphotericin B; Caspofungin; Azole; Antifungal","score_opus":0.026087718186615875,"score_gpt":0.3011951016118217,"score_spread":0.27510738342520585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024248096","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947618,0.0037480516,0.000082439394,0.0005617161,0.00020736756,0.00019724798,0.00039107638,0.000008304063,0.000041976222],"genre_scores_gemma":[0.9978163,0.0008144885,0.000969715,0.00015968531,0.0001344908,9.59621e-7,0.00004718555,0.000010538645,0.000046634454],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975359,0.00036248553,0.0012159969,0.00019610733,0.0003247582,0.00036474038],"domain_scores_gemma":[0.99734306,0.00088740647,0.0007381434,0.00023187899,0.00044163392,0.00035789897],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016083979,0.0001941963,0.0011766875,0.00015330268,0.000048959973,0.0000051854513,0.0002194486,0.00038865727,0.0020078088],"category_scores_gemma":[0.0019241876,0.00013805888,0.00019425468,0.00021323326,0.0012050722,0.00010339772,0.00010219545,0.00051401916,0.0000026030968],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057104015,0.0004080984,0.6854144,0.0002677826,0.0002177228,0.0000062553568,0.0004194833,6.8864104e-8,0.3100553,0.000016066477,0.0023854284,0.0002384072],"study_design_scores_gemma":[0.002367852,0.00089004607,0.96996707,0.00045380823,0.00033064123,0.00023042776,0.00029391804,0.000012522741,0.02489866,0.000056531106,0.000386823,0.00011167631],"about_ca_topic_score_codex":0.00031592947,"about_ca_topic_score_gemma":0.00017674225,"teacher_disagreement_score":0.28515664,"about_ca_system_score_codex":0.00006148816,"about_ca_system_score_gemma":0.0004268459,"threshold_uncertainty_score":0.99890447},"labels":[],"label_agreement":null},{"id":"W2024767387","doi":"10.1007/s11908-008-0074-z","title":"Invasive candidiasis in the ICU: Prophylaxis versus preemptive treatment","year":2008,"lang":"en","type":"article","venue":"Current Infectious Disease Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Invasive candidiasis; Medicine; Antifungal; Intensive care medicine; Intensive care unit; Incidence (geometry); Serology; Antifungal drugs; Immunology; Fluconazole; Dermatology; Antibody","score_opus":0.05825147982873811,"score_gpt":0.3215838448928222,"score_spread":0.2633323650640841,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024767387","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99210644,0.0027320164,0.0000073192414,0.00011136665,0.0007161838,0.0013468174,0.000013080292,0.00006639447,0.0029003925],"genre_scores_gemma":[0.9974583,0.0017101706,0.0000026788048,0.000044904224,0.00019656756,0.00032373614,0.00005087693,0.000014563072,0.00019823738],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982127,0.00011996049,0.00038305973,0.00047070172,0.00047794599,0.0003356237],"domain_scores_gemma":[0.998538,0.0002178122,0.00017831837,0.00064929767,0.0001461507,0.00027040584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019634078,0.00023099042,0.00032039042,0.000104879684,0.00018473671,0.000020070185,0.00004600637,0.00006121001,0.000086104075],"category_scores_gemma":[0.0009948626,0.00014662731,0.0002671576,0.0003401926,0.00012445165,0.00010986973,0.000022551212,0.0002179827,0.000034628432],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006646084,0.0016754982,0.98550063,0.00012015246,0.000077968616,0.0049056364,0.00094917306,0.000005616395,0.000017668994,0.000010335169,0.00084425544,0.0052284785],"study_design_scores_gemma":[0.0016014415,0.0009828684,0.990497,0.000115111696,0.00022047016,0.00026519794,0.00019417216,0.0000034180548,0.00016265022,0.0001033132,0.0056741615,0.00018022445],"about_ca_topic_score_codex":0.00032517815,"about_ca_topic_score_gemma":0.0006566101,"teacher_disagreement_score":0.005351836,"about_ca_system_score_codex":0.0009157812,"about_ca_system_score_gemma":0.001055531,"threshold_uncertainty_score":0.5979288},"labels":[],"label_agreement":null},{"id":"W2024968909","doi":"10.1371/journal.pone.0042736","title":"Detection of Urinary Excreted Fungal Galactomannan-like Antigens for Diagnosis of Invasive Aspergillosis","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Johns Hopkins University","keywords":"Galactomannan; Urine; Aspergillosis; Urinary system; Antigen; Biomarker; Immunology; Monoclonal antibody; Microbiology; Medicine; Biology; Antibody; Internal medicine; Biochemistry","score_opus":0.06536825671162905,"score_gpt":0.2720382551734497,"score_spread":0.20666999846182066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024968909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974073,0.0011957812,0.00008604034,0.000080238904,0.00006289402,0.00071463495,0.000060997532,0.000033099346,0.00035901926],"genre_scores_gemma":[0.9980114,0.00054410996,0.00086999417,0.000056319175,0.00013344998,0.00009287608,0.000021114372,0.000024165272,0.00024653584],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987569,0.00004196089,0.00036639397,0.00019443317,0.00035144945,0.0002888836],"domain_scores_gemma":[0.9987077,0.00028294674,0.00017779984,0.00033599578,0.0003592396,0.00013629027],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002468745,0.00013456128,0.00049944,0.00010777893,0.000051555395,0.0000023239745,0.00006459207,0.00012840032,0.00012518813],"category_scores_gemma":[0.0006657195,0.00012276444,0.00018662619,0.0001976796,0.00011057032,0.00013891258,0.000030475781,0.00010759379,0.000009574275],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006038224,0.0024671133,0.6230137,0.0010205726,0.00026416103,0.0000015174335,0.0002114079,7.424034e-8,0.3721051,0.000011486519,0.000060322094,0.00024074342],"study_design_scores_gemma":[0.00046488422,0.0007677183,0.48303896,0.00025845016,0.00033775152,0.0000015067064,0.00012079569,0.000016243084,0.5148993,0.000009302624,0.000020946107,0.000064142136],"about_ca_topic_score_codex":0.00003287216,"about_ca_topic_score_gemma":0.000029888628,"teacher_disagreement_score":0.14279418,"about_ca_system_score_codex":0.00005521537,"about_ca_system_score_gemma":0.000055904624,"threshold_uncertainty_score":0.5006189},"labels":[],"label_agreement":null},{"id":"W2025366996","doi":"10.1111/j.1365-2141.2007.06906.x","title":"Considerations in the approach to invasive fungal infection in patients with haematological malignancies","year":2007,"lang":"en","type":"review","venue":"British Journal of Haematology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Intensive care medicine; Medicine; Empiric treatment; Invasive candidiasis; Antifungal; Biology; Dermatology; Antibiotics; Fluconazole","score_opus":0.06451927805154582,"score_gpt":0.3313548320321513,"score_spread":0.2668355539806055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025366996","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2624733,0.7350255,0.00018006041,0.000081926424,0.00011004492,0.0014095876,0.000013357989,0.0000071648133,0.0006990121],"genre_scores_gemma":[0.18278037,0.8154198,0.0011023225,0.00049904955,0.00006820008,0.00005115862,0.000033610362,0.000027236343,0.000018247669],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9969117,0.0006072536,0.001404691,0.00029487014,0.00042230025,0.00035916705],"domain_scores_gemma":[0.9980354,0.00072929077,0.0005499619,0.00021117418,0.00036233893,0.00011185625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012025022,0.00025564013,0.0025563205,0.00047078976,0.00007678218,0.000047462854,0.00014919136,0.00039879908,0.00002686468],"category_scores_gemma":[0.0017809437,0.00016863988,0.00028368726,0.0005544904,0.00021271713,0.00010672578,0.000035947534,0.001210421,0.000008895769],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006513787,0.0053301197,0.6873222,0.024136644,0.00044171844,0.14480218,0.00083890883,0.000010756445,1.9966997e-7,0.0031214913,0.0068987533,0.12644567],"study_design_scores_gemma":[0.0029520444,0.0013556704,0.45042324,0.041046694,0.0007484448,0.46505463,0.00034191893,4.031041e-7,0.0000011382364,0.00033002748,0.03726758,0.00047818312],"about_ca_topic_score_codex":0.00007174827,"about_ca_topic_score_gemma":0.0019654576,"teacher_disagreement_score":0.32025245,"about_ca_system_score_codex":0.00015059563,"about_ca_system_score_gemma":0.00066512526,"threshold_uncertainty_score":0.6876934},"labels":[],"label_agreement":null},{"id":"W2025434594","doi":"10.1016/s0895-4356(99)00191-2","title":"Occurrence and risk factors of oral candidiasis treated with oral antifungals in seniors using inhaled steroids","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Epidemiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital du Sacré-Cœur de Montréal","funders":"Université de Montréal","keywords":"Medicine; Incidence (geometry); Asthma; Drug; Risk factor; Internal medicine; Pharmacology","score_opus":0.1952096465301551,"score_gpt":0.467313150949183,"score_spread":0.2721035044190279,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025434594","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99893904,0.0004532982,0.00012362874,0.0001779877,0.00008016553,0.00014359016,0.00003876319,0.0000050957046,0.00003844954],"genre_scores_gemma":[0.9952534,0.0024404817,0.0020599568,0.00015953262,0.00004770373,3.580665e-7,0.0000059306385,0.0000070593005,0.000025601506],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9932872,0.002663339,0.0032336537,0.00029216363,0.00018995797,0.00033370414],"domain_scores_gemma":[0.9912399,0.006351477,0.0016372367,0.00023227082,0.00021178953,0.00032734743],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00828318,0.00019609804,0.0030553713,0.00014543108,0.00003125523,0.000003935185,0.00010121039,0.00031953564,0.00017952766],"category_scores_gemma":[0.01282153,0.000116652875,0.00032071536,0.0002503201,0.0006536563,0.00014440862,0.000017405036,0.0009403366,0.0000019210838],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003966179,0.00026920115,0.98385143,0.000043485892,0.00016766613,0.00012168643,0.00008481333,0.00009870577,0.00010376159,0.0000028972572,0.00008344647,0.01120671],"study_design_scores_gemma":[0.0032086945,0.0023271698,0.99268895,0.00025583478,0.00029569166,0.00014796667,0.00018929425,0.00051563425,0.00009828928,0.000075602096,0.00009372507,0.000103152415],"about_ca_topic_score_codex":0.0008496319,"about_ca_topic_score_gemma":0.00037335354,"teacher_disagreement_score":0.011103557,"about_ca_system_score_codex":0.000041599065,"about_ca_system_score_gemma":0.00028165168,"threshold_uncertainty_score":0.9954939},"labels":[],"label_agreement":null},{"id":"W2025755808","doi":"10.1021/cb400607h","title":"A Novel Small Molecule Methyltransferase Is Important for Virulence in<i>Candida albicans</i>","year":2013,"lang":"en","type":"article","venue":"ACS Chemical Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Toronto","funders":"National Institute of General Medical Sciences; National Institutes of Health; National Human Genome Research Institute; University of Toronto","keywords":"Candida albicans; Virulence; Biology; Corpus albicans; Sphingolipid; Microbiology; Fungal protein; In vitro; Methyltransferase; Galleria mellonella; Pathogen; Cell biology; Gene; Genetics; Peptide sequence","score_opus":0.02185182517525962,"score_gpt":0.2858381096111757,"score_spread":0.26398628443591604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025755808","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934469,0.0003461056,0.0026110334,0.002342868,0.000038957016,0.00066430174,0.000067020716,0.000028518189,0.00045431175],"genre_scores_gemma":[0.99132526,0.00011142984,0.0028650071,0.0052250987,0.0000582563,0.00017439625,0.00007567142,0.000015092941,0.00014981502],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986208,0.000015790789,0.00040856728,0.0004613593,0.00006810438,0.00042535563],"domain_scores_gemma":[0.9991625,0.00021728178,0.000045950106,0.00030926176,0.00010330896,0.00016169193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016956427,0.00016812659,0.0004128064,0.000040858213,0.00002267861,0.000006333393,0.0001399054,0.00024315357,0.0002708606],"category_scores_gemma":[0.000349795,0.00013022653,0.00012772274,0.00014068816,0.00020620899,0.00003358194,0.00002978925,0.00021725056,0.000026255795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024186091,0.00018391358,0.037869785,0.000055930523,0.000025613992,0.000003770496,0.000066674846,1.5657278e-8,0.959378,0.00029591238,0.00039441485,0.0014840856],"study_design_scores_gemma":[0.0020830547,0.00027496475,0.007748209,0.000037603077,0.000041083935,0.000012729077,0.000060507653,0.000078383535,0.9857512,0.0017142926,0.0019948108,0.00020312626],"about_ca_topic_score_codex":0.00045264373,"about_ca_topic_score_gemma":0.00006299353,"teacher_disagreement_score":0.030121576,"about_ca_system_score_codex":0.00005204981,"about_ca_system_score_gemma":0.00009221164,"threshold_uncertainty_score":0.5310484},"labels":[],"label_agreement":null},{"id":"W2026346424","doi":"10.1046/j.1365-2168.2000.01544-21.x","title":"Requirement for fungal prophylaxis in high-risk surgical patients: a randomized trial","year":2000,"lang":"en","type":"article","venue":"British journal of surgery","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pancreas Centre (Canada)","funders":"","keywords":"Medicine; Nystatin; Chemoprophylaxis; Population; Sputum; Surgery; Internal medicine; Concomitant; Placebo; Mycosis; Randomized controlled trial; Pathology; Tuberculosis; Antifungal; Dermatology","score_opus":0.020418555080487413,"score_gpt":0.267854578814605,"score_spread":0.2474360237341176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026346424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962665,0.0016960178,0.00003686967,0.00013362756,0.00047704863,0.0011429336,0.000035323323,0.000009496733,0.00020220106],"genre_scores_gemma":[0.99531597,0.0032466725,0.00022843743,0.00006782135,0.0006135968,0.000036733065,0.00001737308,0.000019233637,0.0004541408],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99687046,0.000419448,0.0015734591,0.00021339928,0.00059266324,0.0003306005],"domain_scores_gemma":[0.9974618,0.0014156916,0.0004255529,0.00013174867,0.00038030572,0.00018490842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0045946273,0.00013862822,0.001409693,0.00015256027,0.000072395116,0.000044183922,0.000071182,0.00012787373,0.0007294299],"category_scores_gemma":[0.002649005,0.00012310076,0.0008938379,0.00019530336,0.00013934779,0.00020130341,0.000008757509,0.0003876059,0.00000614934],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.7291147,0.0010344214,0.06599285,0.00006849036,0.00009040363,0.0010228956,0.000026993997,0.0000020556226,0.0000037129973,0.000005256504,0.0022458124,0.20039237],"study_design_scores_gemma":[0.88077575,0.0010404129,0.113212414,0.00092612294,0.00015711316,0.00036314648,0.000032232365,0.00001117752,0.00004197794,0.000309385,0.0029552002,0.00017505731],"about_ca_topic_score_codex":0.00019586344,"about_ca_topic_score_gemma":0.000043804284,"teacher_disagreement_score":0.2002173,"about_ca_system_score_codex":0.00013019796,"about_ca_system_score_gemma":0.00029535708,"threshold_uncertainty_score":0.7986746},"labels":[],"label_agreement":null},{"id":"W2026756388","doi":"10.1139/w04-025","title":"rDNA-RFLP identification of<i>Candida</i>species in immunocompromised and seriously diseased patients","year":2004,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biology; Restriction fragment length polymorphism; Restriction enzyme; Microbiology; Polymerase chain reaction; Amplicon; Candida albicans; Candida parapsilosis; Ribosomal DNA; Genotyping; Ribosomal RNA; Restriction digest; Genotype; Molecular biology; DNA; Gene; Genetics; Phylogenetics","score_opus":0.006424076918328896,"score_gpt":0.21383507699863666,"score_spread":0.20741100008030777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026756388","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99817497,0.0010287282,0.000031844298,0.0003920467,0.00010058168,0.000151579,0.000057641617,0.0000013457039,0.000061282924],"genre_scores_gemma":[0.9995361,0.00006765777,0.00011456154,0.00014661899,0.000018059769,7.9560914e-7,0.000023007104,0.000006082589,0.00008714447],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992029,0.000025064863,0.000463385,0.000103524115,0.000033999648,0.00017111332],"domain_scores_gemma":[0.9992754,0.000017018847,0.00020843689,0.00011627451,0.00018656105,0.000196346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018739692,0.00007665793,0.00028200817,0.00019901842,0.000036997873,0.0000071839545,0.00007693172,0.00007662397,0.000026518019],"category_scores_gemma":[0.0001405668,0.000066266846,0.00006549273,0.00009586093,0.00023632505,0.00005058274,0.000005432095,0.00014243602,0.0000020946488],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022428102,0.00004897807,0.4831777,0.000044720135,0.000024862999,0.000034137618,0.0003963341,0.000012182585,0.5154762,0.000060868693,0.000109482746,0.0003902451],"study_design_scores_gemma":[0.0028540823,0.00021879651,0.98263174,0.00011678846,0.000033575096,0.00004656234,0.00015741627,0.0000014597905,0.013152782,0.000194439,0.00052760827,0.00006476551],"about_ca_topic_score_codex":0.0007883684,"about_ca_topic_score_gemma":0.013978723,"teacher_disagreement_score":0.5023234,"about_ca_system_score_codex":0.00019844955,"about_ca_system_score_gemma":0.0010586807,"threshold_uncertainty_score":0.78004557},"labels":[],"label_agreement":null},{"id":"W2027014835","doi":"10.1097/01.tp.0000437434.42851.d4","title":"Pretransplant Aspergillus Colonization of Cystic Fibrosis Patients and the Incidence of Post–Lung Transplant Invasive Aspergillosis","year":2013,"lang":"en","type":"article","venue":"Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University Health Network; University of Toronto","funders":"","keywords":"Lung transplantation; Medicine; Cystic fibrosis; Transplantation; Aspergillosis; Aspergillus; Internal medicine; Gastroenterology; Lung; Incidence (geometry); Retrospective cohort study; Sputum culture; Surgery; Sputum; Immunology; Pathology; Microbiology; Biology; Tuberculosis","score_opus":0.005240375486924895,"score_gpt":0.2188162800901663,"score_spread":0.21357590460324138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027014835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99552107,0.00028707614,0.0023929523,0.00022550992,0.000045084747,0.0010637786,0.00022177107,0.000016354266,0.00022640746],"genre_scores_gemma":[0.9975965,0.0016172987,0.00033430333,0.00009833074,0.000009978925,0.000034564,0.00027009795,0.000012831578,0.000026082045],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99863017,0.00011788342,0.000504624,0.0002188487,0.00037314292,0.0001553225],"domain_scores_gemma":[0.99877185,0.00040096501,0.00017371762,0.00017184611,0.0004148137,0.00006679414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020219423,0.00014901882,0.00036660672,0.000086046755,0.00007168864,0.000009130902,0.00008206368,0.00010038432,0.000095708994],"category_scores_gemma":[0.00009066457,0.00010012839,0.00009663322,0.00020771682,0.00031048383,0.00020548975,0.0000043743253,0.00010484257,0.000004525441],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0054889605,0.00018659706,0.8752563,0.0034662555,0.0001320308,0.000006148919,0.008570981,0.000045603858,0.10523792,0.00079709984,0.00001477089,0.00079733157],"study_design_scores_gemma":[0.003718336,0.0003615985,0.9527851,0.000642954,0.0005641453,0.000013662916,0.00016036522,0.0008729372,0.040686682,0.00009468991,6.3338086e-7,0.00009890122],"about_ca_topic_score_codex":0.0008858037,"about_ca_topic_score_gemma":0.00025071902,"teacher_disagreement_score":0.0775288,"about_ca_system_score_codex":0.000026917895,"about_ca_system_score_gemma":0.000071584625,"threshold_uncertainty_score":0.4083117},"labels":[],"label_agreement":null},{"id":"W2027855442","doi":"10.1159/000236800","title":"Abnormal Delayed Hypersensitivity Response to Antigens of Candida albicans in Alloxan-Diabetic Mice","year":2009,"lang":"en","type":"article","venue":"International Archives of Allergy and Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lallemand (Canada); Université de Montréal","funders":"","keywords":"Antigen; Candida albicans; Delayed hypersensitivity; Adjuvant; Alloxan; Saline; Sensitization; Chemistry; Immunology; Molecular biology; Microbiology; Biology; Endocrinology; Diabetes mellitus","score_opus":0.0068481412543243995,"score_gpt":0.25488739749363154,"score_spread":0.24803925623930714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027855442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99219024,0.00020876205,0.0001970091,0.0025567708,0.000060133196,0.00009542714,0.000021795644,0.0000058496175,0.004664039],"genre_scores_gemma":[0.99823034,0.0003126589,0.0007667538,0.00027826242,0.00001407792,0.0000014875384,0.000012958858,0.000003826314,0.00037963246],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99922156,0.00007214743,0.0002769559,0.00017641502,0.00010355756,0.00014938191],"domain_scores_gemma":[0.99945337,0.00024912506,0.00006625788,0.00012996228,0.000056864763,0.00004439984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013581132,0.000086508466,0.00025590905,0.00021643905,0.000018346274,0.0000019671807,0.00009243497,0.000048345675,0.00003977627],"category_scores_gemma":[0.00020152297,0.00008088539,0.000060554365,0.000066944805,0.00021133106,0.000037287726,0.000041659903,0.00012073899,0.0000020105697],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01919355,0.00030255195,0.01997579,0.000007692581,0.00026142472,0.00003782281,0.0014357541,0.000024691088,0.94594574,0.0012097151,0.000012042671,0.011593247],"study_design_scores_gemma":[0.0010333871,0.00094075303,0.9807048,0.00007489425,0.0000061818005,0.00002490046,0.00025170835,0.00016527012,0.015440464,0.00044064334,0.0008516337,0.0000654055],"about_ca_topic_score_codex":0.0004272013,"about_ca_topic_score_gemma":0.00068377197,"teacher_disagreement_score":0.96072894,"about_ca_system_score_codex":0.00001649356,"about_ca_system_score_gemma":0.00007607114,"threshold_uncertainty_score":0.32984102},"labels":[],"label_agreement":null},{"id":"W2028325150","doi":"10.1111/j.1462-5822.2004.00420.x","title":"Candida albicans and Streptococcus salivarius modulate IL-6, IL-8, and TNF-alpha expression and secretion by engineered human oral mucosa cells","year":2004,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Streptococcus salivarius; Candida albicans; Biology; Microbiology; Secretion; Proinflammatory cytokine; Tumor necrosis factor alpha; Chemokine; Yeast; Corpus albicans; Immunology; Bacteria; Inflammation; Streptococcus mutans; Biochemistry","score_opus":0.007597439227707141,"score_gpt":0.2283582404851052,"score_spread":0.22076080125739805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028325150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956617,0.0020218333,0.0012463243,0.00018546486,0.000087523134,0.0004866594,0.00019793404,0.000050079125,0.00006251379],"genre_scores_gemma":[0.99809116,0.00023750663,0.00038571237,0.000132163,0.000042820775,0.000009670948,0.0005132018,0.000025501355,0.0005622659],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998629,0.000078584155,0.0002917536,0.0005802216,0.00005475902,0.00036570433],"domain_scores_gemma":[0.9993476,0.00003432347,0.00008020081,0.0002815657,0.00005173139,0.00020456755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018508421,0.00026161215,0.00044591038,0.000058737398,0.00015271254,0.000022775603,0.000057262852,0.00030139397,0.000084638894],"category_scores_gemma":[0.000022435142,0.00022385133,0.000049320744,0.00006884255,0.0003762737,0.00006207269,0.000080391466,0.0002482632,0.0000055025425],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008675834,0.00007254398,0.006412912,0.00011668554,0.00003309394,0.000040713847,0.0003034501,0.000003196436,0.99195814,0.00007102405,0.00038133794,0.0005201628],"study_design_scores_gemma":[0.003742965,0.0006127376,0.015677206,0.00013813737,0.000115876384,0.000063958636,0.00022333716,0.00005480881,0.9720411,0.00031169268,0.0066530076,0.00036517569],"about_ca_topic_score_codex":0.00024736117,"about_ca_topic_score_gemma":0.00010407381,"teacher_disagreement_score":0.019917024,"about_ca_system_score_codex":0.00006587714,"about_ca_system_score_gemma":0.000043143922,"threshold_uncertainty_score":0.91283923},"labels":[],"label_agreement":null},{"id":"W2028501485","doi":"10.1097/01.ftd.0000150135.22645.ea","title":"Clinical Pharmacokinetic Monitoring of Itraconazole Is Warranted in Only a Subset of Patients","year":2005,"lang":"en","type":"review","venue":"Therapeutic Drug Monitoring","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Itraconazole; Pharmacokinetics; Therapeutic drug monitoring; Medicine; Drug; Antifungal drug; Pharmacology; Internal medicine; Oncology; Antifungal; Dermatology","score_opus":0.10805476886322697,"score_gpt":0.4478956322358209,"score_spread":0.33984086337259395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028501485","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23138103,0.7666229,0.0000029333441,0.000010117048,0.0008717779,0.00084871764,0.000048651375,0.00002778315,0.0001860762],"genre_scores_gemma":[0.334493,0.6644597,0.00014931549,0.000008224036,0.00056434143,0.000019276331,0.000016409307,0.000059887323,0.00022983135],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9955027,0.00031299793,0.0024020083,0.0005996188,0.00069228315,0.0004903686],"domain_scores_gemma":[0.99752176,0.0004963558,0.00084149593,0.0007247594,0.00025100913,0.00016462582],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00094076525,0.000524774,0.003085517,0.00031749002,0.000033749628,0.0000081577555,0.0003729919,0.000355266,0.00006933535],"category_scores_gemma":[0.00007831344,0.00044190642,0.00090820075,0.0005603707,0.00017459595,0.000091967384,0.000077417004,0.0010163463,0.000019437242],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013276513,0.0005287529,0.37513155,0.006871693,0.00023705319,0.000006184166,0.00025100348,2.8609426e-7,0.000021454369,9.1739764e-7,0.0000037101745,0.6168146],"study_design_scores_gemma":[0.0050631193,0.00037431446,0.7176521,0.06361481,0.003961176,0.000007762227,0.0004339632,0.00001919769,0.0009844884,0.00001318996,0.20695336,0.00092253514],"about_ca_topic_score_codex":0.000043618787,"about_ca_topic_score_gemma":0.0000025242655,"teacher_disagreement_score":0.6158921,"about_ca_system_score_codex":0.00021786605,"about_ca_system_score_gemma":0.00042444747,"threshold_uncertainty_score":0.99980325},"labels":[],"label_agreement":null},{"id":"W2028640502","doi":"10.1111/j.1462-5822.2009.01408.x","title":"<i>Aspergillus fumigatus</i>MedA governs adherence, host cell interactions and virulence","year":2009,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":138,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; National Center for Research Resources; Wellcome Trust","keywords":"Conidiation; Virulence; Biology; Aspergillus fumigatus; Microbiology; Aspergillus nidulans; Fungal protein; Cell biology; Gene; Genetics; Mutant","score_opus":0.00999826930791028,"score_gpt":0.2457496899720827,"score_spread":0.23575142066417243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028640502","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870846,0.0025434084,0.0004007442,0.000524386,0.00026661606,0.00024643991,0.000051082145,0.000056350993,0.008826353],"genre_scores_gemma":[0.9907586,0.00038580524,0.00038064638,0.0013398047,0.000098977354,0.0000034811835,0.00009489831,0.00001128253,0.0069265114],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99882317,0.00005891339,0.0002684304,0.00045131275,0.000050486924,0.00034768725],"domain_scores_gemma":[0.99926597,0.000060363353,0.00008174877,0.0003639067,0.00008011208,0.00014791441],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000119133154,0.00019268584,0.0003405524,0.000054737582,0.00011070151,0.000014617823,0.00010519845,0.0001600494,0.00044969682],"category_scores_gemma":[0.000052955347,0.00016553856,0.00010316771,0.00013087004,0.00024425698,0.000071878436,0.000044049684,0.00033618227,0.00023710192],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014224376,0.00015712348,0.0077056102,0.000035215395,0.000013919939,0.00005985228,0.00011588142,1.5565413e-7,0.9883801,0.00015952713,0.0022646224,0.0009657596],"study_design_scores_gemma":[0.0018379486,0.0014059552,0.056199383,0.00014784171,0.00014839819,0.00031870574,0.0005182366,0.000035481964,0.79781175,0.00020074827,0.14089859,0.0004769821],"about_ca_topic_score_codex":0.000034493278,"about_ca_topic_score_gemma":0.00005944154,"teacher_disagreement_score":0.19056834,"about_ca_system_score_codex":0.00006649222,"about_ca_system_score_gemma":0.0000756644,"threshold_uncertainty_score":0.6750466},"labels":[],"label_agreement":null},{"id":"W2029024690","doi":"10.1016/j.oos.2009.06.397","title":"P1.111. Mutant P53 and possible markers of premalignancy in chronic hyperplastic candidiasis","year":2009,"lang":"en","type":"article","venue":"Oral Oncology Supplement","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Medicine; Mutant; Genetics; Biology; Gene","score_opus":0.018293331917180956,"score_gpt":0.3256720446973604,"score_spread":0.3073787127801794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029024690","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942579,0.00086143945,0.000052958003,0.0023044562,0.00007137171,0.00053428847,0.000031879845,0.000013162446,0.0018725102],"genre_scores_gemma":[0.99794066,0.0003764328,0.0011453944,0.00027642274,0.000036740727,0.00001357666,0.00003187257,0.000007668397,0.00017122706],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986341,0.000075620585,0.00044084905,0.00030034367,0.00018583698,0.0003632343],"domain_scores_gemma":[0.9994388,0.00008322526,0.000095028576,0.00021353125,0.0000454621,0.0001239069],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037287295,0.00014648597,0.0005084629,0.000112313275,0.00003698116,0.000005175972,0.00006252187,0.000114414055,0.0010406154],"category_scores_gemma":[0.000061026694,0.00012162519,0.00006369626,0.00016805054,0.00012803054,0.00006658284,0.00003064397,0.00015194753,0.000004732421],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004920667,0.0012359982,0.82057524,0.00041005496,0.00012668397,0.0006171072,0.0006955696,0.00002230071,0.0791274,0.00091618963,0.0034231585,0.087929636],"study_design_scores_gemma":[0.005360447,0.011126443,0.9631578,0.00024807756,0.0001623942,0.00004978415,0.00072144525,0.00021058318,0.010630296,0.0004030578,0.0077348854,0.0001948342],"about_ca_topic_score_codex":0.00034176055,"about_ca_topic_score_gemma":0.003611275,"teacher_disagreement_score":0.14258252,"about_ca_system_score_codex":0.0006833282,"about_ca_system_score_gemma":0.0007682028,"threshold_uncertainty_score":0.99987257},"labels":[],"label_agreement":null},{"id":"W2029038776","doi":"10.1378/chest.09-1103","title":"The Effect of Chronic Infection With Aspergillus fumigatus on Lung Function and Hospitalization in Patients With Cystic Fibrosis","year":2009,"lang":"en","type":"article","venue":"CHEST Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":371,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Ottawa; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Medicine; Allergic bronchopulmonary aspergillosis; Aspergillus fumigatus; Cystic fibrosis; Pulmonary function testing; Sputum; Lung; Relative risk; Immunology; Internal medicine; Immunoglobulin E; Pathology; Confidence interval; Tuberculosis; Antibody","score_opus":0.0023714677779230727,"score_gpt":0.2112270531359444,"score_spread":0.20885558535802132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029038776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984866,0.00030534776,0.00071162806,0.00006720337,0.000052695133,0.00024320155,4.86771e-7,0.000006969002,0.00012589255],"genre_scores_gemma":[0.9997926,0.00008223472,0.000015463207,0.000014859337,0.00006005362,0.0000019720464,0.000005185785,0.0000065144063,0.000021157995],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99933237,0.00005967923,0.00015157217,0.00010559139,0.00022537909,0.00012543802],"domain_scores_gemma":[0.9995952,0.00005934166,0.000108121254,0.00010049597,0.00008206055,0.00005477264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002584834,0.0000926516,0.00015224938,0.000054575925,0.00011932162,0.000022139873,0.000018227007,0.00004419226,0.000005478398],"category_scores_gemma":[0.00008649711,0.000046068417,0.000025150206,0.00015840157,0.000059128433,0.00009961532,0.0000028696973,0.00019435066,6.2382503e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004352764,0.000077372475,0.98501694,0.00009760862,0.000021986358,0.0000024356486,0.00003501751,0.00009276916,0.0003560161,0.000018822497,0.000018273362,0.009910021],"study_design_scores_gemma":[0.0029774855,0.01567334,0.97989666,0.00046805598,0.00008612824,0.000008242328,0.000009130284,0.00015782737,0.00062287017,0.000022604267,0.000026132722,0.000051492352],"about_ca_topic_score_codex":0.000005707815,"about_ca_topic_score_gemma":0.00003364641,"teacher_disagreement_score":0.015595967,"about_ca_system_score_codex":0.000192837,"about_ca_system_score_gemma":0.000045186312,"threshold_uncertainty_score":0.18786155},"labels":[],"label_agreement":null},{"id":"W2029801315","doi":"10.1200/jco.2007.15.2777","title":"Invasive Pulmonary Aspergillosis Associated With Marijuana Use in a Man With Colorectal Cancer","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":81,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Medicine; Colorectal cancer; Aspergillosis; Oncology; Lung cancer; Internal medicine; Cancer; Intensive care medicine; Pathology; Immunology","score_opus":0.14672705767809083,"score_gpt":0.416259373939547,"score_spread":0.26953231626145613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029801315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952982,0.00018765492,0.000009937164,0.0021893259,0.00015014593,0.000213756,0.000005830866,0.000008385629,0.0019367334],"genre_scores_gemma":[0.99554825,0.0012105535,0.0006446632,0.0017588076,0.00021853767,0.0000062730523,0.0000036144875,0.00001910853,0.00059019687],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971778,0.0004087219,0.001401427,0.00024268865,0.00047843493,0.00029094508],"domain_scores_gemma":[0.9950229,0.0027490573,0.0011119469,0.00014276708,0.0006403131,0.00033304925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013194828,0.0001592858,0.0015184169,0.000118579504,0.00005388966,0.000005270986,0.00011807211,0.00036584123,0.00017250305],"category_scores_gemma":[0.0044403705,0.0000944926,0.00024498353,0.00030388462,0.0005435984,0.0002140531,0.000028181827,0.0012290378,0.000005149527],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0211795,0.0021354908,0.95901155,0.0000151168615,0.0004111085,0.01303017,0.00010349773,0.000018275028,0.00022937097,0.000007792429,0.0008968983,0.0029612165],"study_design_scores_gemma":[0.005649791,0.012402105,0.9795208,0.000378209,0.00024573138,0.0006650195,0.0001633445,0.0000334097,0.000090079986,0.000021920392,0.00071546773,0.000114116156],"about_ca_topic_score_codex":0.00028760053,"about_ca_topic_score_gemma":0.011432387,"teacher_disagreement_score":0.020509243,"about_ca_system_score_codex":0.0004413301,"about_ca_system_score_gemma":0.0037635805,"threshold_uncertainty_score":0.667643},"labels":[],"label_agreement":null},{"id":"W2030444197","doi":"10.1159/000018488","title":"The Implications and Management of Drug Interactions with Itraconazole, Fluconazole and Terbinafine","year":2000,"lang":"en","type":"article","venue":"Dermatology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Terbinafine; Itraconazole; Fluconazole; Drug; Context (archaeology); Antifungal; Antifungal drug; Medicine; Intensive care medicine; Drug interaction; Antifungal drugs; Pharmacology; Risk analysis (engineering); Dermatology; Biology","score_opus":0.007259358033172762,"score_gpt":0.26611325637572136,"score_spread":0.2588538983425486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030444197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9799579,0.00074990385,0.000052642976,0.008921598,0.000010195742,0.00018043225,0.0000043448863,0.000012651866,0.010110362],"genre_scores_gemma":[0.99624455,0.001459515,0.0002740081,0.00022013272,0.000004835885,0.00002133514,0.000005649151,0.0000041348057,0.0017658458],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99958897,0.00001633955,0.00013516536,0.00011775541,0.0000407798,0.000101003396],"domain_scores_gemma":[0.99965036,0.000068403126,0.000027845235,0.00018252232,0.000029875022,0.000041016214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003627009,0.000056251323,0.00012373448,0.000018187167,0.000108470056,0.000005769548,0.000031793843,0.000014038013,0.00005996404],"category_scores_gemma":[0.0000028108477,0.00003501709,0.000014695641,0.000055810473,0.00023169968,0.000035581117,0.000014633512,0.00006707763,0.000006464224],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007703304,0.0002537271,0.85114664,0.0005175956,0.00032455544,0.00008524393,0.0006289501,0.0000010153624,0.0019388996,0.03187228,0.00454492,0.10791583],"study_design_scores_gemma":[0.0005911141,0.00002219447,0.96594715,0.000042267344,0.00007411434,0.00061601505,0.00042813102,0.00004149397,0.000709143,0.0003503164,0.031133937,0.000044146684],"about_ca_topic_score_codex":0.000016849688,"about_ca_topic_score_gemma":0.00014578037,"teacher_disagreement_score":0.114800476,"about_ca_system_score_codex":0.0000057815896,"about_ca_system_score_gemma":0.000011201217,"threshold_uncertainty_score":0.14279555},"labels":[],"label_agreement":null},{"id":"W2030694526","doi":"10.1177/0091270007301799","title":"Pharmacological Risk Factors for Amphotericin B Nephrotoxicity in Children","year":2007,"lang":"en","type":"article","venue":"The Journal of Clinical Pharmacology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; SickKids Foundation; University of British Columbia; University of Toronto; BC Children's Hospital","funders":"","keywords":"Emergency department; Medicine; Pediatric emergency medicine; Sick child; Columbia university; Family medicine; Pediatrics; Emergency physician; Psychiatry; Media studies","score_opus":0.07610468210957791,"score_gpt":0.4671582270183429,"score_spread":0.391053544908765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030694526","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945237,0.00025848873,0.0024233877,0.000849425,0.0009552791,0.00084927207,0.000010547768,0.000011216584,0.00011865108],"genre_scores_gemma":[0.9937826,0.0008972347,0.00041578693,0.0033126376,0.0015107801,0.000002334294,0.0000018230924,0.000012683863,0.00006412348],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9967645,0.0006375816,0.001760141,0.00017186963,0.00025645486,0.00040945248],"domain_scores_gemma":[0.9929857,0.005534942,0.00085116806,0.00012540961,0.0002193565,0.00028341994],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.010729752,0.00016010333,0.0008405513,0.000099948025,0.000086783424,0.000004096039,0.00029370878,0.00021869308,0.00035860148],"category_scores_gemma":[0.0018736066,0.00008671543,0.0005855679,0.00019547432,0.00041230765,0.000071157854,0.000048333237,0.0013828523,0.0000068214363],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.017396696,0.0010692932,0.9495981,0.000010795842,0.00042578133,0.000035416095,0.00010192188,0.00003006897,0.020777991,0.0000049055657,0.006784548,0.0037645157],"study_design_scores_gemma":[0.0074738003,0.002098546,0.97669107,0.000012475436,0.0008398159,0.000069454865,0.00011861229,0.00009175058,0.010728201,0.00021205966,0.0015767089,0.000087517015],"about_ca_topic_score_codex":0.000026893544,"about_ca_topic_score_gemma":0.000018914494,"teacher_disagreement_score":0.027092991,"about_ca_system_score_codex":0.000080932354,"about_ca_system_score_gemma":0.00019072837,"threshold_uncertainty_score":0.6007882},"labels":[],"label_agreement":null},{"id":"W2031220125","doi":"10.1111/j.1472-765x.2009.02582.x","title":"Screening method to identify inhibitors of siderophore biosynthesis in the opportunistic fungal pathogen,<i>Aspergillus fumigatus</i>","year":2009,"lang":"en","type":"article","venue":"Letters in Applied Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada; Simon Fraser University","keywords":"Aspergillus fumigatus; Library science; Pathogen; Biological sciences; Clinical microbiology; Biology; Microbiology; Human pathogen; Fungal pathogen; Computational biology; Computer science; Gene; Genetics","score_opus":0.02097112053875193,"score_gpt":0.3138700043372942,"score_spread":0.29289888379854223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031220125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852433,0.00012916901,0.0053945933,0.0074667158,0.00008004694,0.0008047081,0.000054308817,0.000024573264,0.0008025357],"genre_scores_gemma":[0.96448344,0.000013198461,0.013269469,0.02203789,0.00008214767,0.000022065444,0.000058168647,0.000016728993,0.000016899794],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978666,0.00025516574,0.00069088925,0.0005511823,0.00012382859,0.00051237224],"domain_scores_gemma":[0.9989008,0.00034569832,0.00013262896,0.0005154484,0.00002495374,0.00008052551],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001267631,0.0002531324,0.00065718085,0.0002904954,0.000051265655,0.000010599139,0.0002838629,0.00021897958,0.00004078904],"category_scores_gemma":[0.00011736975,0.00019132915,0.00013692677,0.0005544231,0.00017438081,0.000020548876,0.000056506105,0.00046016442,0.0000150519745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048382682,0.00013793688,0.009702845,0.0000457991,0.00001777773,0.00020548743,0.0007252066,0.000018412173,0.97557443,0.0003321177,0.0011316607,0.011624469],"study_design_scores_gemma":[0.0038714448,0.0007400366,0.36809626,0.00063469267,0.00022672127,0.00039439427,0.0040643257,0.000035106346,0.6118586,0.0006294629,0.00844803,0.0010009415],"about_ca_topic_score_codex":0.00004927271,"about_ca_topic_score_gemma":0.00008275006,"teacher_disagreement_score":0.36371586,"about_ca_system_score_codex":0.00010626299,"about_ca_system_score_gemma":0.000067327805,"threshold_uncertainty_score":0.7802176},"labels":[],"label_agreement":null},{"id":"W2031250982","doi":"10.1097/inf.0b013e3181634f2b","title":"FATAL ZYGOMYCOSIS CAUSED BY MUCOR INDICUS IN A CHILD WITH AN IMPLANTABLE LEFT VENTRICULAR ASSIST DEVICE","year":2008,"lang":"en","type":"review","venue":"The Pediatric Infectious Disease Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Zygomycosis; Medicine; Mucor; Mucormycosis; Surgery; Cardiology; Dermatology; Microbiology; Amphotericin B; Antifungal; Biology; Aspergillus","score_opus":0.014068000395732357,"score_gpt":0.28487649027345313,"score_spread":0.27080848987772077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031250982","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10190154,0.8957687,0.000043942735,0.000034623274,0.00020550238,0.0012108082,0.00027089458,0.00006843318,0.00049553206],"genre_scores_gemma":[0.071731746,0.92617655,0.000009552204,0.00011192321,0.001475689,0.000050137303,0.00023599717,0.00009686424,0.00011153009],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9960416,0.00058361114,0.0010276523,0.0005964065,0.00092552573,0.00082522037],"domain_scores_gemma":[0.997054,0.00025096236,0.00085082615,0.00070796936,0.00017626213,0.0009599745],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005828155,0.000714098,0.0018319763,0.0005666865,0.0007836301,0.00014111894,0.00037194818,0.00030126816,0.00014429748],"category_scores_gemma":[0.00026531098,0.00040847302,0.00073822023,0.0010898954,0.00010979004,0.00025943297,0.00007074784,0.0022736634,0.00007122195],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082710595,0.0032168913,0.9140602,0.011232521,0.0010176664,0.012502076,0.00019933944,0.000012870155,2.0465767e-7,0.0000057349425,0.015153095,0.041772325],"study_design_scores_gemma":[0.010663325,0.0027781713,0.16196458,0.01236869,0.03580848,0.18610267,0.00027678788,0.00003359303,0.0000012594478,0.000083216975,0.58650446,0.0034147394],"about_ca_topic_score_codex":0.00012562542,"about_ca_topic_score_gemma":0.00014687105,"teacher_disagreement_score":0.7520956,"about_ca_system_score_codex":0.0007769386,"about_ca_system_score_gemma":0.0023604971,"threshold_uncertainty_score":0.9998367},"labels":[],"label_agreement":null},{"id":"W2031748785","doi":"10.1007/s11046-009-9196-6","title":"Invasive Fungal Infection in Haematopoietic Stem Cell Transplant Recipients: Epidemiology from the Transplant Physician’s Viewpoint","year":2009,"lang":"en","type":"review","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Manitoba Health","funders":"","keywords":"Stem cell; Transplantation; Medicine; Immunology; Hematopoietic stem cell transplantation; Graft-versus-host disease; Neutropenia; Hematopoietic stem cell; Haematopoiesis; Internal medicine; Biology; Chemotherapy","score_opus":0.0721597278851675,"score_gpt":0.3310335910796381,"score_spread":0.2588738631944706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031748785","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03555955,0.9599894,0.00025324643,0.00021083254,0.00052073406,0.002153068,0.00043271936,0.000107139815,0.00077331235],"genre_scores_gemma":[0.02897269,0.9678205,0.00009586854,0.0017527571,0.000296679,0.00020414659,0.0006160021,0.000057952886,0.00018338175],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9935505,0.0023081216,0.0018209699,0.0012191343,0.0003106818,0.00079063256],"domain_scores_gemma":[0.99557495,0.0024107022,0.0006590522,0.0011199964,0.000072261915,0.00016301977],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0020313526,0.00083412824,0.0042069294,0.00017441585,0.00014093459,0.000017930235,0.0003940298,0.0009678618,0.00006856108],"category_scores_gemma":[0.00020492145,0.00049864076,0.0011476276,0.0005078293,0.0002527601,0.00008600968,0.00004069841,0.0019763208,0.00035411335],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000542938,0.0011119874,0.11359806,0.016419128,0.00017869337,0.0038990674,0.0018742962,0.0000045436864,0.00008027259,0.00018475315,0.0016404559,0.8604658],"study_design_scores_gemma":[0.0036320656,0.0025390366,0.5451786,0.17337002,0.008831571,0.0017047115,0.00027868323,0.000018727804,0.00015732594,0.0017027805,0.2598832,0.0027032986],"about_ca_topic_score_codex":0.00023104108,"about_ca_topic_score_gemma":0.0005264356,"teacher_disagreement_score":0.8577625,"about_ca_system_score_codex":0.0004480732,"about_ca_system_score_gemma":0.00044848328,"threshold_uncertainty_score":0.9997465},"labels":[],"label_agreement":null},{"id":"W2031793087","doi":"10.1371/journal.pone.0123171","title":"Impaired T Cell Responsiveness to Interleukin-6 in Hematological Patients with Invasive Aspergillosis","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"","keywords":"Immunology; TLR2; Biology; Aspergillosis; Immune system; Hematopoietic stem cell transplantation; Haematopoiesis; Stem cell; Innate immune system","score_opus":0.05867196362181553,"score_gpt":0.25482926322226995,"score_spread":0.19615729960045442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031793087","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971711,0.000048783382,0.000012221928,0.0006322506,0.000014915506,0.0006689214,0.000008928324,0.00003794627,0.0014049436],"genre_scores_gemma":[0.99730015,0.0000055027213,0.0014419361,0.0006939785,0.000016735125,0.000041630814,0.000019267207,0.00001628853,0.00046451896],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998602,0.00008612931,0.0002399369,0.00032981302,0.0004810369,0.000261106],"domain_scores_gemma":[0.99880433,0.00011996332,0.000047492624,0.00033319285,0.0003884681,0.00030656173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019879793,0.0001416539,0.00044975558,0.000113101516,0.000022376857,0.000010145076,0.0000984924,0.000086830405,0.00006359924],"category_scores_gemma":[0.0010143331,0.00010147362,0.000038272407,0.00030459042,0.000059967257,0.00007044243,0.00006565899,0.00016335539,0.00013700798],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0057147327,0.00358744,0.98364705,0.00013488266,0.000041454154,0.00010825687,0.0006943905,0.0000011057059,0.0057645575,0.000012763651,0.00024147115,0.000051925148],"study_design_scores_gemma":[0.00284972,0.002146193,0.94017714,0.0006657597,0.00006719974,0.0000012789493,0.0006210738,0.00000748893,0.05322591,0.000050905113,0.000027326378,0.0001600236],"about_ca_topic_score_codex":0.000037830025,"about_ca_topic_score_gemma":0.0002531477,"teacher_disagreement_score":0.04746135,"about_ca_system_score_codex":0.00022066395,"about_ca_system_score_gemma":0.00020368489,"threshold_uncertainty_score":0.4137974},"labels":[],"label_agreement":null},{"id":"W2032598979","doi":"10.1016/j.ajic.2014.03.025","title":"Surveillance of patients identified with fungal mold at a public academic medical center","year":2014,"lang":"en","type":"article","venue":"American Journal of Infection Control","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Epidemiology; Retrospective cohort study; Public health; Colonization; Health care; Medical record; Observational study; Infection control; Emergency medicine; Family medicine; Internal medicine; Intensive care medicine; Pathology; Microbiology","score_opus":0.006671926858923915,"score_gpt":0.2545184425827727,"score_spread":0.24784651572384875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032598979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99046713,0.000035456316,0.007904137,0.0009536541,0.00018951368,0.00013052206,0.0000068602553,0.000011420529,0.00030128408],"genre_scores_gemma":[0.99889237,0.00006532025,0.000034834917,0.0007394473,0.00019418247,0.000002295075,0.000003674183,0.000012946552,0.0000549438],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979338,0.00025250087,0.00063579576,0.00014663264,0.0008147848,0.0002164685],"domain_scores_gemma":[0.9976451,0.00024335858,0.0008592317,0.00017305212,0.00077964563,0.00029962164],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001019793,0.00012327875,0.0006067763,0.00014546113,0.0000497322,0.000008107316,0.00008280863,0.00006939123,0.00019604481],"category_scores_gemma":[0.001329695,0.00008312555,0.00017798084,0.00025027877,0.00034739252,0.00013704393,0.000016566419,0.000440804,0.000008150319],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00214603,0.00019787076,0.98442495,0.000025772597,0.00014416935,0.0000067415804,0.000029245004,0.0000033592721,0.0004266145,0.000023485658,0.0004119869,0.012159787],"study_design_scores_gemma":[0.00536849,0.0022266225,0.9899332,0.00010445026,0.000042332656,0.00010437994,0.000018397992,0.00011563946,0.0001576385,0.000007037671,0.0018461435,0.00007568758],"about_ca_topic_score_codex":0.00004950277,"about_ca_topic_score_gemma":0.00016687532,"teacher_disagreement_score":0.012084099,"about_ca_system_score_codex":0.000114625276,"about_ca_system_score_gemma":0.00016551749,"threshold_uncertainty_score":0.33897617},"labels":[],"label_agreement":null},{"id":"W2033179792","doi":"10.1128/iai.68.6.3377-3384.2000","title":"Adhesion of <i>Aspergillus</i> Species to Extracellular Matrix Proteins: Evidence for Involvement of Negatively Charged Carbohydrates on the Conidial Surface","year":2000,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Natural Sciences and Engineering Research Council of Canada; Directorate for Biological Sciences","keywords":"Extracellular matrix; Adhesion; Biology; Microbiology; Extracellular; Aspergillus; Biochemistry; Matrix (chemical analysis); Biophysics; Cell biology; Chemistry","score_opus":0.0731337392301648,"score_gpt":0.3222165160462341,"score_spread":0.24908277681606927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033179792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99703914,0.0007136783,0.00013725054,0.000489639,0.00004234659,0.0012058596,0.000016369388,0.000014175668,0.00034151383],"genre_scores_gemma":[0.9974298,0.0007951874,0.00011999935,0.00007727357,0.000024853896,0.000024498988,0.000005115089,0.0000064563255,0.0015168105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991999,0.00012950716,0.00026656347,0.00013123507,0.00016309794,0.00010969302],"domain_scores_gemma":[0.9991511,0.00028728353,0.00008762259,0.0002380955,0.00019029954,0.000045596025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061256567,0.000100101344,0.00022782438,0.000032378717,0.00014438108,0.000008678595,0.000046135043,0.000051287672,0.0003031999],"category_scores_gemma":[0.00043202017,0.00006711045,0.00008225151,0.00016740877,0.00014031006,0.000073140036,0.000016139044,0.00012216932,0.0000055275086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016837746,0.00024813565,0.028162148,0.0002389457,0.000031332314,2.9541096e-7,0.00088406145,0.00002706227,0.9666388,0.000577362,0.000120767516,0.0013873137],"study_design_scores_gemma":[0.00064171234,0.0017365715,0.20421322,0.00053398515,0.000040160412,6.6146623e-7,0.0003372103,0.00009612469,0.78842145,0.00010249158,0.003792649,0.00008374997],"about_ca_topic_score_codex":0.00086845405,"about_ca_topic_score_gemma":0.000110374705,"teacher_disagreement_score":0.17821732,"about_ca_system_score_codex":0.000039820006,"about_ca_system_score_gemma":0.000053961427,"threshold_uncertainty_score":0.33198264},"labels":[],"label_agreement":null},{"id":"W2033429308","doi":"10.1016/j.cub.2008.06.034","title":"Complementary Adhesin Function in C. albicans Biofilm Formation","year":2008,"lang":"en","type":"article","venue":"Current Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":353,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Biofilm; Candida albicans; Bacterial adhesin; Microbiology; Biology; Corpus albicans; Fungal protein; Pilus; Virulence; Gene; Genetics; Bacteria; Mutant","score_opus":0.0860805087465131,"score_gpt":0.3427321212214353,"score_spread":0.2566516124749222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033429308","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99566615,0.0010339696,0.0014728575,0.00043153,0.00033656036,0.00022559149,0.00001667692,0.000029953848,0.0007867196],"genre_scores_gemma":[0.9986859,0.00040159666,0.00008531995,0.00021412755,0.00009328458,0.000010588027,0.00045484092,0.0000038000192,0.000050539762],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99930817,0.000052122716,0.00023140936,0.00016698828,0.000058891215,0.00018244675],"domain_scores_gemma":[0.9997084,0.000026948417,0.000043114585,0.00013918405,0.000035211116,0.000047136335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111307905,0.00007783103,0.00017010968,0.00008883204,0.000051924406,0.0000012578616,0.000036354504,0.0000530464,0.00027523373],"category_scores_gemma":[0.00003186784,0.00006381086,0.00004859421,0.00012791317,0.00010246577,0.00006196495,0.000016930095,0.00013304062,0.00008490213],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002994394,0.00019192656,0.95731795,0.000053787728,0.000007632721,0.0000044980616,0.00014259163,2.7797546e-7,0.012050464,0.000616647,0.0044790297,0.024835771],"study_design_scores_gemma":[0.0011115336,0.0003549146,0.9420743,0.000037087062,0.00001573475,0.00001786845,0.00013109688,0.000147857,0.0011862079,0.0003633565,0.054474395,0.00008564618],"about_ca_topic_score_codex":0.000051673615,"about_ca_topic_score_gemma":0.00018868335,"teacher_disagreement_score":0.049995366,"about_ca_system_score_codex":0.00008109777,"about_ca_system_score_gemma":0.000046195837,"threshold_uncertainty_score":0.30136165},"labels":[],"label_agreement":null},{"id":"W2033650657","doi":"10.1002/cbic.201100121","title":"Identification and Characterization of New Inhibitors of Fungal Homoserine Kinase","year":2011,"lang":"en","type":"article","venue":"ChemBioChem","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre; McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Homoserine; Antimicrobial; Biochemistry; Kinase; Chemistry; Biology; Microbiology; Computational biology; Quorum sensing; Gene","score_opus":0.02488373131977512,"score_gpt":0.2500191152573888,"score_spread":0.22513538393761368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033650657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998891,0.00011628535,0.00012699566,0.000038327264,0.00004116799,0.00013309135,0.0000066846437,0.000012478479,0.0006339901],"genre_scores_gemma":[0.99842036,0.00006234425,0.00013750566,0.000014023242,0.000043966716,0.000001814965,0.000032024232,0.0000072945213,0.0012806858],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99941945,0.00000578674,0.00025640635,0.00014223738,0.00010485121,0.00007129408],"domain_scores_gemma":[0.99948066,0.0000055009064,0.0001320573,0.00020888538,0.00010478553,0.00006813254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009837138,0.00006595435,0.00017227455,0.000035758152,0.000011920577,0.0000020184564,0.00003314912,0.00005877064,0.00007719137],"category_scores_gemma":[0.00006324617,0.000061359206,0.000040752544,0.000113581074,0.00008397981,0.00006139681,0.000019518215,0.00004409993,0.00000296158],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015478364,0.000103322294,0.0981793,0.00023817217,0.000011775501,0.0000012550785,0.00050241605,1.2746634e-9,0.8981264,0.00010432025,0.000051076848,0.0025271324],"study_design_scores_gemma":[0.0002185126,0.000047816477,0.4248523,0.000040499246,0.000021735463,0.0000015721939,0.000060277824,0.0000028354361,0.5746684,0.000031093496,0.000027448505,0.000027459868],"about_ca_topic_score_codex":0.000023835048,"about_ca_topic_score_gemma":0.0000024936585,"teacher_disagreement_score":0.32667303,"about_ca_system_score_codex":0.000010873574,"about_ca_system_score_gemma":0.0000480103,"threshold_uncertainty_score":0.2502156},"labels":[],"label_agreement":null},{"id":"W2033716606","doi":"10.1002/yea.1346","title":"New tools for phenotypic analysis in <i>Candida albicans</i>: the <i>WAR1</i> gene confers resistance to sorbate","year":2006,"lang":"en","type":"article","venue":"Yeast","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Royal Victoria Hospital","funders":"","keywords":"URA3; Biology; Plasmid; Candida albicans; Gene; Genetics; Recombinase; Corpus albicans; Genome; Gene knockout; Recombination","score_opus":0.016106872672084254,"score_gpt":0.266422874534038,"score_spread":0.25031600186195374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033716606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93236333,0.00089217874,0.042606227,0.0068231924,0.00012882234,0.0014719592,0.00017495302,0.000069002635,0.015470315],"genre_scores_gemma":[0.9763325,0.000014742142,0.0021494685,0.0014781127,0.00022294707,0.000046640773,0.0000677905,0.000018048564,0.019669745],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986245,0.000036508365,0.00033561987,0.00037913467,0.00025726223,0.00036697448],"domain_scores_gemma":[0.9990693,0.00012497797,0.00006481187,0.0005118632,0.00009558445,0.00013348143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031328047,0.00015650166,0.00040097695,0.00010625767,0.00008730018,0.000053634383,0.0001582442,0.00006517407,0.0001593531],"category_scores_gemma":[0.00011695989,0.00011419408,0.00021499577,0.00083700265,0.00005934563,0.00007599203,0.0000224551,0.00011934343,0.000034761757],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010291808,0.0006748708,0.6236007,0.00036847117,0.0012022232,0.00011198444,0.002244517,0.0013041602,0.12750311,0.017914187,0.18616766,0.028616281],"study_design_scores_gemma":[0.002314889,0.00010935078,0.8771925,0.00007741511,0.00070319005,0.0000015564234,0.00047523272,0.000086905995,0.007738001,0.0013660833,0.109621115,0.0003137402],"about_ca_topic_score_codex":0.0009081451,"about_ca_topic_score_gemma":0.027264161,"teacher_disagreement_score":0.2535918,"about_ca_system_score_codex":0.00010568691,"about_ca_system_score_gemma":0.00020476089,"threshold_uncertainty_score":0.9904857},"labels":[],"label_agreement":null},{"id":"W2033743393","doi":"10.1016/j.diagmicrobio.2009.09.019","title":"Molecular identification of phaeohyphomycosis due to Alternaria infectoria in a patient with acute myeloid leukemia—a case report","year":2009,"lang":"en","type":"article","venue":"Diagnostic Microbiology and Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"Alliance for Cancer Gene Therapy","keywords":"Myeloid leukemia; Phaeohyphomycosis; Polymerase chain reaction; Antifungal; Microbiology; Biology; Fungemia; Medicine; Immunology; Gene","score_opus":0.00388318192192479,"score_gpt":0.2406102593658708,"score_spread":0.236727077443946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033743393","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99763894,0.00034942623,0.000809185,0.00018034264,0.0000992328,0.0007347355,0.00006577673,0.000028822604,0.0000935201],"genre_scores_gemma":[0.99907696,0.000066357046,0.000043561933,0.00061103946,0.000021903461,0.00004933825,0.000108314416,0.000009539333,0.000012996053],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987785,0.000077791534,0.00045076726,0.00041635265,0.000058293856,0.00021830096],"domain_scores_gemma":[0.9989619,0.00017557574,0.00015219439,0.00035055296,0.00013740444,0.00022233257],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016369548,0.00017209708,0.0003575361,0.00014999098,0.000055223067,0.000009765908,0.000034967645,0.00009207035,0.000020483943],"category_scores_gemma":[0.00096810993,0.00014389773,0.00006567161,0.00023748017,0.00010896118,0.000059876176,0.00002454731,0.0001333176,0.00000618708],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001632667,0.0008001587,0.51049,0.00011401165,0.00013932661,0.20224401,0.0003457664,0.000090673864,0.28166083,0.00024329613,0.00017153955,0.0020677338],"study_design_scores_gemma":[0.002759501,0.0027339724,0.8583159,0.0003558826,0.0007090418,0.065884836,0.000071822724,0.000038848855,0.06806043,0.00047760646,0.00017154102,0.00042065652],"about_ca_topic_score_codex":0.00017001285,"about_ca_topic_score_gemma":0.00017269733,"teacher_disagreement_score":0.34782586,"about_ca_system_score_codex":0.00012257097,"about_ca_system_score_gemma":0.0002064334,"threshold_uncertainty_score":0.5867979},"labels":[],"label_agreement":null},{"id":"W2033784922","doi":"10.1016/s0891-5520(02)00043-0","title":"Fungal infections in nontransplant patients with hematologic malignancies","year":2002,"lang":"en","type":"review","venue":"Infectious Disease Clinics of North America","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; CancerCare Manitoba","funders":"","keywords":"Medicine; Cryptococcus neoformans; Cryptococcus; Dimorphic fungus; Cryptococcosis; Amphotericin B; Population; Immunology; Aspergillus; Dermatology; Microbiology; Antifungal; Biology","score_opus":0.02358933918375867,"score_gpt":0.3028116179798478,"score_spread":0.27922227879608913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033784922","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10563971,0.8904537,0.00008606902,0.000009400608,0.00019252145,0.0020662406,0.0008327942,0.0001220498,0.00059749157],"genre_scores_gemma":[0.12314102,0.87592715,0.000031344596,0.00008153657,0.000048316404,0.00015240532,0.0004956858,0.000055347868,0.00006717694],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969332,0.00017648686,0.0013106774,0.0006726902,0.0004422712,0.0004646368],"domain_scores_gemma":[0.99725676,0.00050061184,0.0007733996,0.0007695295,0.00030004032,0.000399686],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010788196,0.00055993267,0.0026848377,0.00036679234,0.0000870769,0.0000137705,0.00015570498,0.00020659699,0.00012434961],"category_scores_gemma":[0.0004800908,0.00040708535,0.0008320506,0.0009872814,0.00042826173,0.00009082158,0.00004209267,0.0006841318,0.00008685653],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014576886,0.0026007725,0.80244106,0.012774862,0.00019835975,0.00018716101,0.000016061433,0.000006351816,1.9958586e-9,0.00000367658,0.00006896533,0.18155697],"study_design_scores_gemma":[0.0018625373,0.0017941055,0.6855201,0.013763893,0.0035703,0.00003752195,0.0000063596726,0.000010899333,1.7353146e-8,0.000016162156,0.29272068,0.0006974272],"about_ca_topic_score_codex":0.00006235808,"about_ca_topic_score_gemma":0.00049261074,"teacher_disagreement_score":0.2926517,"about_ca_system_score_codex":0.00016849015,"about_ca_system_score_gemma":0.0007180584,"threshold_uncertainty_score":0.9998381},"labels":[],"label_agreement":null},{"id":"W2034436648","doi":"10.1128/jcm.00934-06","title":"<i>Candida albicans</i>Strain Maintenance, Replacement, and Microvariation Demonstrated by Multilocus Sequence Typing","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":142,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto; Wellcome Trust","keywords":"Multilocus sequence typing; Biology; Typing; Candida albicans; Genetics; Corpus albicans; Strain (injury); Candida dubliniensis; Microbiology; Locus (genetics); Genotype; Gene","score_opus":0.030361899223997863,"score_gpt":0.35134558004744637,"score_spread":0.3209836808234485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034436648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939012,0.00072085817,0.0025263575,0.0017650132,0.0003337861,0.0001616312,0.00006053038,0.000010919807,0.00051968766],"genre_scores_gemma":[0.99442106,0.00037571258,0.0029674259,0.0010907925,0.00023140915,7.5012923e-7,0.000035274188,0.000009750177,0.00086784374],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977533,0.00021781898,0.001463321,0.00025805802,0.00005072926,0.00025675504],"domain_scores_gemma":[0.9982589,0.00041283338,0.00075868226,0.0001543568,0.00029240473,0.00012283066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016209949,0.00013616394,0.00064762327,0.00005425111,0.0000531579,0.000013330371,0.00008617799,0.0002518537,0.00008635631],"category_scores_gemma":[0.00077864254,0.00010029265,0.0001734295,0.00010268664,0.0003982419,0.000072874056,0.00002169343,0.00052289956,0.0000061275887],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017673334,0.00021125634,0.21090089,0.00002819635,0.000077228724,0.000032844287,0.000010542737,9.763027e-7,0.7654822,0.0000837091,0.016012324,0.0053925384],"study_design_scores_gemma":[0.020120056,0.0053895656,0.7171567,0.00083187857,0.0005736802,0.003735515,0.00032261433,0.00018554639,0.015545931,0.0016034966,0.23389153,0.0006434658],"about_ca_topic_score_codex":0.00005278162,"about_ca_topic_score_gemma":0.000058478934,"teacher_disagreement_score":0.7499362,"about_ca_system_score_codex":0.000054112974,"about_ca_system_score_gemma":0.00024021305,"threshold_uncertainty_score":0.40898156},"labels":[],"label_agreement":null},{"id":"W2034679216","doi":"10.1128/aac.49.7.2887-2894.2005","title":"Efficacy of the Antiadhesin Octyl <i>O</i> -(2-Acetamido-2-Deoxy-β- <scp>d</scp> - Galactopyranosyl)-(1-4)-2- <i>O</i> -Propyl-β- <scp>d</scp> -Galactopyranoside (Fimbrigal-P) in a Rat Oral Candidiasis Model","year":2005,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Helix Biopharma (Canada); University of Saskatchewan","funders":"University of Alberta","keywords":"Disaccharide; Candida albicans; Immunogenicity; In vivo; Chemistry; Microbiology; In vitro; Bioavailability; Glycoside; Pharmacology; Biochemistry; Biology; Antigen; Stereochemistry; Immunology","score_opus":0.016496528252137318,"score_gpt":0.26130733853206783,"score_spread":0.2448108102799305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034679216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923609,0.00028777582,0.00012796585,0.002222377,0.00022630091,0.0013521457,0.00006146861,0.000091282374,0.003269823],"genre_scores_gemma":[0.9772404,0.0024981727,0.00078999216,0.011133263,0.00021688401,0.000016815335,0.000038134964,0.00012253379,0.00794381],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959763,0.00016042218,0.0010997562,0.0010281402,0.000650725,0.0010846017],"domain_scores_gemma":[0.99771374,0.00033114696,0.0004317274,0.0010084662,0.00018354943,0.00033136262],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005457093,0.0007356368,0.0013049655,0.00020996653,0.0002928785,0.00012562564,0.00050180487,0.0004805042,0.00006645576],"category_scores_gemma":[0.00033590524,0.0005531716,0.00060709694,0.0007222678,0.0006655883,0.00039135217,0.00014772109,0.0007037776,0.000027714108],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005573149,0.0026218498,0.47201815,0.0004922858,0.00035098498,0.000042443506,0.0043397085,0.00020398707,0.4112853,0.00007818988,0.10078641,0.007223375],"study_design_scores_gemma":[0.013064513,0.0002941157,0.4059314,0.00067348796,0.00030318258,0.00006162551,0.00046780537,0.0019876321,0.52179694,0.00007012154,0.055074178,0.000275003],"about_ca_topic_score_codex":0.0002668781,"about_ca_topic_score_gemma":0.00039334237,"teacher_disagreement_score":0.11051163,"about_ca_system_score_codex":0.00016255741,"about_ca_system_score_gemma":0.00039933503,"threshold_uncertainty_score":0.99969196},"labels":[],"label_agreement":null},{"id":"W2035017907","doi":"10.1371/journal.ppat.1003633","title":"Emergence of Azole-Resistant Aspergillus fumigatus Strains due to Agricultural Azole Use Creates an Increasing Threat to Human Health","year":2013,"lang":"en","type":"review","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":385,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Aspergillus fumigatus; Itraconazole; Posaconazole; Aspergillosis; Voriconazole; Azole; Incidence (geometry); Drug resistance; Aspergillus; Medicine; Biology; Microbiology; Immunology; Antifungal","score_opus":0.12440147991393337,"score_gpt":0.3707741429050757,"score_spread":0.24637266299114235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035017907","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47644565,0.51746255,0.0000177061,0.00009690346,0.00011919616,0.0037002603,0.001426908,0.00013309147,0.00059774594],"genre_scores_gemma":[0.12524624,0.8665739,0.003884633,0.00035502418,0.00057065644,0.00032767007,0.0014846501,0.00020803644,0.0013491476],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99470806,0.0005220915,0.0016856119,0.0012156699,0.0008488803,0.0010196916],"domain_scores_gemma":[0.9958692,0.00015448601,0.00055717747,0.0014067863,0.0005502554,0.0014620983],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00058095297,0.0009057211,0.0037205988,0.00031690145,0.00034185106,0.00008095403,0.00045682213,0.0003889246,0.00043792182],"category_scores_gemma":[0.00056961674,0.0006302424,0.00076349213,0.0008221617,0.00012852371,0.00024098437,0.00019685485,0.0005601085,0.00015573426],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081817905,0.0065900767,0.011998229,0.13315177,0.0030916212,0.0011983832,0.010020157,0.000012317086,0.1590095,0.00156571,0.010724747,0.6618193],"study_design_scores_gemma":[0.0026979689,0.016051965,0.5592758,0.18913253,0.011612131,0.0006896326,0.014253327,0.000026332473,0.0025999234,0.00011118846,0.19534856,0.008200645],"about_ca_topic_score_codex":0.0013764951,"about_ca_topic_score_gemma":0.0013043061,"teacher_disagreement_score":0.65361863,"about_ca_system_score_codex":0.0003544698,"about_ca_system_score_gemma":0.00069023913,"threshold_uncertainty_score":0.9996149},"labels":[],"label_agreement":null},{"id":"W2035332564","doi":"10.1111/j.1542-4758.2008.00279.x","title":"Effect of an ethanol/trisodium citrate hemodialysis catheter locking solution on isolates of <i>Candida albicans</i>","year":2008,"lang":"en","type":"article","venue":"Hemodialysis International","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Research Manitoba; St. Boniface Hospital; University of Manitoba","funders":"","keywords":"Trisodium citrate; Candida albicans; Hemodialysis Catheter; Agar; Medicine; Catheter; Saline; Hemodialysis; Ethanol; Chromatography; Microbiology; Chemistry; Surgery; Anesthesia; Biology; Nuclear chemistry; Biochemistry; Bacteria","score_opus":0.015092038330087808,"score_gpt":0.28413379947333023,"score_spread":0.2690417611432424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035332564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939413,0.000079256664,0.0010897046,0.00020396919,0.00019571173,0.00022496995,0.000050460814,0.00003351824,0.004181102],"genre_scores_gemma":[0.9984196,0.00009466394,0.00042501645,0.00015567374,0.0002027852,0.000016824086,0.00015790181,0.000022134534,0.0005054087],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99786407,0.0001493782,0.0006253374,0.00043213717,0.0006925695,0.00023651797],"domain_scores_gemma":[0.9984057,0.00031211032,0.00032630918,0.0004810386,0.00035799333,0.0001168272],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065959874,0.00023001703,0.00068907836,0.00034500365,0.00008444534,0.000009389659,0.00022057816,0.00015366194,0.0004131545],"category_scores_gemma":[0.0003231541,0.00019101366,0.0005335283,0.00032219198,0.00023930958,0.0001578201,0.000040748888,0.00021430822,0.00002022753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0089144595,0.0019167359,0.44562578,0.00029448583,0.0014558448,0.00006079231,0.0014876104,0.0006367719,0.5205577,0.00015436097,0.0005653613,0.018330088],"study_design_scores_gemma":[0.0036985574,0.0024562895,0.058567118,0.00020537613,0.00065297587,0.000039599585,0.000048254893,0.011880263,0.9216589,0.000103462604,0.00037280068,0.00031644807],"about_ca_topic_score_codex":0.00023577553,"about_ca_topic_score_gemma":0.00004827973,"teacher_disagreement_score":0.40110114,"about_ca_system_score_codex":0.00014314287,"about_ca_system_score_gemma":0.00010725631,"threshold_uncertainty_score":0.77893114},"labels":[],"label_agreement":null},{"id":"W2035516863","doi":"10.2217/fmb.14.18","title":"Elucidating Drug Resistance in Human Fungal Pathogens","year":2014,"lang":"en","type":"review","venue":"Future Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Drug resistance; Cryptococcus neoformans; Echinocandin; Echinocandins; Biology; Aspergillus fumigatus; Microbiology; Drug; Cryptococcosis; Candida albicans; Antifungal drug; Aspergillosis; Cryptococcus; Amphotericin B; Immunology; Caspofungin; Antifungal; Fluconazole; Pharmacology","score_opus":0.018786766280686748,"score_gpt":0.3228358596266362,"score_spread":0.30404909334594943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035516863","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00049939385,0.99494135,0.000026154356,0.00016985484,0.00061435165,0.00088978413,0.00014474963,0.00006874407,0.0026455917],"genre_scores_gemma":[0.0004027314,0.987589,0.0007935433,0.00033791826,0.002152038,0.000055982448,0.0015143376,0.00008315626,0.0070713176],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965633,0.000574543,0.0011141883,0.0010014217,0.00008219609,0.0006643549],"domain_scores_gemma":[0.99823225,0.00018361946,0.00044570374,0.0009300899,0.000088605484,0.00011972612],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008149261,0.00059773395,0.0031832065,0.00025347047,0.00013009614,0.000014603895,0.00032537323,0.00092821365,0.00024285069],"category_scores_gemma":[0.00013797186,0.00045438643,0.0006817279,0.00034658413,0.00019383717,0.000027071217,0.00011269218,0.0013497297,0.00018342039],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003725536,0.00075041706,0.0035169055,0.17764182,0.00075829565,0.0017098254,0.0009564599,9.322971e-8,0.01649458,0.004279923,0.16020186,0.6333173],"study_design_scores_gemma":[0.00037851866,0.00004488663,0.00016950897,0.0083831735,0.000318609,0.00010476101,0.00004077614,3.7459642e-8,0.00001933985,0.000029368617,0.990128,0.00038305536],"about_ca_topic_score_codex":0.0000093623285,"about_ca_topic_score_gemma":0.0014516842,"teacher_disagreement_score":0.8299261,"about_ca_system_score_codex":0.000291411,"about_ca_system_score_gemma":0.0003066864,"threshold_uncertainty_score":0.9997908},"labels":[],"label_agreement":null},{"id":"W2035711987","doi":"10.1097/inf.0b013e3181f63c90","title":"INVASIVE ASPERGILLOSIS IN CYSTIC FIBROSIS","year":2010,"lang":"en","type":"review","venue":"The Pediatric Infectious Disease Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Aspergillosis; Cystic fibrosis; Aspergillus fumigatus; Complication; Medicine; Allergic bronchopulmonary aspergillosis; Aspergillus; Fibrosis; Pathology; Immunology; Internal medicine; Microbiology; Biology; Antibody","score_opus":0.019783410793902126,"score_gpt":0.30925608975648117,"score_spread":0.28947267896257906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035711987","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01987955,0.9772584,0.0000129525615,0.00008215279,0.0008184475,0.0009661757,0.00006532529,0.000047557565,0.00086947076],"genre_scores_gemma":[0.014252527,0.98163426,0.000027248161,0.00011704743,0.0034088835,0.00010681152,0.000022134253,0.00007457307,0.00035652352],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969149,0.00045718483,0.0010434989,0.00041139676,0.00060400733,0.0005689857],"domain_scores_gemma":[0.99672896,0.0010539786,0.0006426713,0.00070147717,0.00020815991,0.0006647841],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00094908243,0.0005283936,0.0015829718,0.0005838452,0.0003651115,0.00011314762,0.0003270123,0.00039207638,0.00059279316],"category_scores_gemma":[0.0028073748,0.00030822257,0.0013786487,0.0009721181,0.00012812985,0.00011333203,0.00009895607,0.0031506743,0.00030170844],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002743113,0.0009435471,0.5953915,0.02581475,0.00030366788,0.0013953667,0.00012853272,0.000004889748,6.2466853e-7,0.000051287036,0.00377636,0.37191513],"study_design_scores_gemma":[0.0029040829,0.0006976967,0.13316123,0.013670169,0.036299136,0.005557659,0.000083529114,0.000009561084,3.536362e-7,0.0024209442,0.80340534,0.0017903191],"about_ca_topic_score_codex":0.00002395579,"about_ca_topic_score_gemma":0.000078724384,"teacher_disagreement_score":0.799629,"about_ca_system_score_codex":0.00049476,"about_ca_system_score_gemma":0.003235033,"threshold_uncertainty_score":0.999937},"labels":[],"label_agreement":null},{"id":"W2037970310","doi":"10.1023/b:pham.0000041449.46054.b4","title":"Heat-Treated Fungizone Retains Amphotericin B Antifungal Activity Without Renal Toxicity in Rats Infected with Aspergillus Fumigatus","year":2004,"lang":"en","type":"article","venue":"Pharmaceutical Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Centers for Disease Control and Prevention; Michael Smith Health Research BC","keywords":"Aspergillus fumigatus; Amphotericin B; Creatinine; Toxicity; Pharmacology; Aspergillosis; Medicine; Kidney; Aspergillus; Biology; Antifungal; Internal medicine; Microbiology; Immunology","score_opus":0.10999938197175392,"score_gpt":0.43533573738627446,"score_spread":0.32533635541452055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037970310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99132407,0.00028067236,0.00034440178,0.0018211674,0.000048162074,0.001395149,0.000025872334,0.00015778531,0.0046027247],"genre_scores_gemma":[0.9984601,0.00025157706,0.00025607206,0.00025992925,0.00013714058,0.00006100683,0.000030363102,0.000060343584,0.0004834497],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9943297,0.0006952934,0.00046913192,0.001026242,0.0018349077,0.0016447264],"domain_scores_gemma":[0.997197,0.00044297997,0.000031683678,0.000725541,0.0006315526,0.00097124674],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0022278244,0.0004008441,0.00080257846,0.0004629327,0.00028949542,0.00008050197,0.0002475678,0.00028743688,0.0005042807],"category_scores_gemma":[0.0010991828,0.00030371305,0.00014224245,0.0022842858,0.0010263779,0.0002863328,0.00019053876,0.0026470127,0.00015274383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012553619,0.0015839657,0.32228902,0.00018329736,0.000092568596,0.0011120477,0.00014044807,0.0000360963,0.65919745,0.0001615471,0.0000637544,0.002586186],"study_design_scores_gemma":[0.0059038736,0.0013274178,0.4928355,0.00039338125,0.000059406295,0.000075295655,0.00006918375,0.0012189066,0.49718446,0.000101872305,0.00052572857,0.00030497272],"about_ca_topic_score_codex":0.0010097928,"about_ca_topic_score_gemma":0.0012754266,"teacher_disagreement_score":0.17054647,"about_ca_system_score_codex":0.001194956,"about_ca_system_score_gemma":0.0010343579,"threshold_uncertainty_score":0.99994147},"labels":[],"label_agreement":null},{"id":"W2038020214","doi":"10.1186/s12865-014-0049-9","title":"Defective IL-17- and IL-22-dependent mucosal host response to Candida albicans determines susceptibility to oral candidiasis in mice expressing the HIV-1 transgene","year":2014,"lang":"en","type":"article","venue":"BMC Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Institute for Research in Immunology and Cancer; Montreal Clinical Research Institute; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Candida albicans; Biology; Corpus albicans; CCL20; Immunology; Microbiology; Immune system; Innate immune system; Transgene; Chemokine; Gene","score_opus":0.017982240696514103,"score_gpt":0.28184925789506626,"score_spread":0.26386701719855216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038020214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99431163,0.00036628824,0.002108444,0.0016126042,0.0001905168,0.0010486243,0.00009359309,0.0000485495,0.00021973494],"genre_scores_gemma":[0.9972492,0.00002693285,0.0009374562,0.00078323676,0.00006997265,0.00010977848,0.000012333158,0.00003154564,0.0007795323],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99686986,0.0010261147,0.00048246488,0.00075148384,0.00022898913,0.0006410913],"domain_scores_gemma":[0.9979242,0.0008629384,0.00007877814,0.00073440373,0.0001960158,0.00020362916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015403852,0.00030942794,0.0006366759,0.0002058882,0.00020519867,0.00004136948,0.00024350456,0.00020972989,0.0001061355],"category_scores_gemma":[0.0022600181,0.00023303002,0.00010064523,0.00043437714,0.00035022496,0.00009988122,0.00013402857,0.00036560118,0.00004315771],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.017277066,0.00018620475,0.45309114,0.000057533165,0.000053519216,0.000029085708,0.0044153025,0.000012028832,0.52011955,0.00001693795,0.00023702718,0.004504616],"study_design_scores_gemma":[0.002205844,0.0009818926,0.96880645,0.000093326,0.0000771994,0.000050852414,0.0025586085,0.000053940355,0.022558635,0.000025929166,0.0023206137,0.00026670826],"about_ca_topic_score_codex":0.0032183283,"about_ca_topic_score_gemma":0.066491924,"teacher_disagreement_score":0.5157153,"about_ca_system_score_codex":0.00029988275,"about_ca_system_score_gemma":0.00034931608,"threshold_uncertainty_score":0.95054215},"labels":[],"label_agreement":null},{"id":"W2038848214","doi":"10.1111/j.1439-0507.2000.00605.x","title":"Acute vaginal candidosis model in the immunocompromized rat to evaluate delivery systems for antimycotics Modell der akuten Vaginalcandidose bei immunsupprimierten Ratten zur Bewertung lokaler antimykotischer Chemotherapie","year":2000,"lang":"de","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Science Centre for Human and Animal Health; University of Saskatchewan","funders":"","keywords":"Immunosuppression; Candida albicans; Cyclophosphamide; Antifungal; Medicine; Mycosis; Immunology; Microbiology; Biology; Dermatology; Chemotherapy; Surgery","score_opus":0.02608417483475553,"score_gpt":0.29752554623083693,"score_spread":0.2714413713960814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038848214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90070283,0.080909975,0.005101925,0.004136571,0.0009201962,0.0066339048,0.00066559925,0.00011019238,0.0008187915],"genre_scores_gemma":[0.96234214,0.021531992,0.0024202352,0.0039111055,0.0006304728,0.00053600396,0.00037954582,0.00022476097,0.008023748],"study_design_codex":"not_applicable","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99280363,0.0007086035,0.001699895,0.0015360666,0.0013429933,0.0019088323],"domain_scores_gemma":[0.99588925,0.00067459774,0.000324488,0.0020222533,0.00066053984,0.00042890108],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002444431,0.0012018945,0.0022595967,0.00037770963,0.000604435,0.00044658434,0.001271392,0.00054879097,0.000488313],"category_scores_gemma":[0.00013116251,0.00089646183,0.00072192034,0.00082782115,0.00033657392,0.0005026336,0.00013932868,0.0009372977,0.00049757364],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.14534305,0.013421935,0.08503123,0.0070600733,0.03291048,0.0018240978,0.048741058,0.1689027,0.15605448,0.0005490477,0.2700328,0.07012906],"study_design_scores_gemma":[0.027633272,0.0014966466,0.012643949,0.0023860806,0.010536849,0.00005471102,0.0014570709,0.91637963,0.0031664562,0.00031802672,0.021641705,0.002285625],"about_ca_topic_score_codex":0.001510148,"about_ca_topic_score_gemma":0.00012977234,"teacher_disagreement_score":0.74747694,"about_ca_system_score_codex":0.0005330084,"about_ca_system_score_gemma":0.0008681222,"threshold_uncertainty_score":0.9993486},"labels":[],"label_agreement":null},{"id":"W2039342879","doi":"10.1016/j.mib.2011.07.006","title":"Molecular mechanism of Aspergillus fumigatus adherence to host constituents","year":2011,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":106,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Aspergillus fumigatus; Biology; Microbiology; Virulence; Host (biology); Sialic acid; Receptor; Mechanism (biology); Mannose receptor; Mannose; Aspergillus; Biochemistry; Gene; Macrophage; In vitro; Genetics","score_opus":0.11966632850122144,"score_gpt":0.4014238024128106,"score_spread":0.2817574739115892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039342879","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004033663,0.99269646,0.00037359624,0.0000070365572,0.004426612,0.0014831848,0.00028380615,0.000020610969,0.00030531592],"genre_scores_gemma":[0.0017161112,0.99729365,0.00022263324,0.00002303999,0.00008758964,0.000078371966,0.00050843117,0.000029286703,0.000040882333],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99755627,0.00022887813,0.0010101995,0.0007096772,0.00007263149,0.0004223482],"domain_scores_gemma":[0.998664,0.000068325746,0.000339156,0.0006255005,0.00014356454,0.00015943435],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027510335,0.0004261615,0.0021356568,0.0003326015,0.00002290541,0.0000038349094,0.00032474234,0.0004882106,0.0002468187],"category_scores_gemma":[0.00019822412,0.00034711286,0.0004470085,0.00036495156,0.00024854857,0.000021035987,0.00019693984,0.0005902286,0.00027863585],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023178507,0.0009762221,0.0006337128,0.08583099,0.00028707454,0.000024458868,0.00020697688,1.1961967e-7,0.0059003667,0.023507785,0.0020603738,0.88034016],"study_design_scores_gemma":[0.0004603715,0.00045367432,0.000043600834,0.034730423,0.00015910719,0.00006914059,0.0000146719485,1.426279e-7,0.0002136725,0.000068248766,0.9634666,0.00032037165],"about_ca_topic_score_codex":0.000023356339,"about_ca_topic_score_gemma":0.0000070047276,"teacher_disagreement_score":0.96140623,"about_ca_system_score_codex":0.00015671845,"about_ca_system_score_gemma":0.0005773477,"threshold_uncertainty_score":0.9998981},"labels":[],"label_agreement":null},{"id":"W2039605305","doi":"10.1016/j.cyto.2003.11.015","title":"In vitro analyses of tissue structure and interleukin-1β expression and production by human oral mucosa in response to Candida albicans infections","year":2004,"lang":"en","type":"article","venue":"Cytokine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Candida albicans; Corpus albicans; Biology; Microbiology; Oral mucosa; Secretion; Chemokine; In vitro; Cytokine; Immunology; Immune system","score_opus":0.018132771058137192,"score_gpt":0.3447735756317514,"score_spread":0.3266408045736142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039605305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99831706,0.0001726617,0.00005967586,0.0010535826,0.000034495137,0.0002996249,0.000031236606,0.000010320457,0.000021353142],"genre_scores_gemma":[0.9994054,0.000020689802,0.00024030016,0.00007538182,0.000029206369,0.0000078137355,0.000020988646,0.000008218727,0.00019204414],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99918836,0.0000655323,0.00023397565,0.00027088792,0.000109741864,0.00013151245],"domain_scores_gemma":[0.99962085,0.000026242928,0.000043931068,0.00018440846,0.00004396669,0.00008060249],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001864198,0.00010389328,0.0002698752,0.00022545707,0.00003877967,0.000007140814,0.00002727241,0.000066465436,0.00003331694],"category_scores_gemma":[0.00027405276,0.00008594291,0.000015838614,0.0003158502,0.000093766714,0.00009651728,0.000030745075,0.00015062183,3.7752275e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017386692,0.000111703215,0.042529695,0.00005426643,0.0000061286696,0.000014668773,0.00072345656,0.000014746432,0.95416814,0.0000043826826,0.00013754178,0.00049663027],"study_design_scores_gemma":[0.0010664162,0.00033610643,0.24706294,0.00013512251,0.00001567601,0.000013852624,0.0002196659,0.0000013235029,0.7505894,0.00014010014,0.00035469377,0.000064736734],"about_ca_topic_score_codex":0.0015374961,"about_ca_topic_score_gemma":0.0036918076,"teacher_disagreement_score":0.20453325,"about_ca_system_score_codex":0.00012192175,"about_ca_system_score_gemma":0.00004666735,"threshold_uncertainty_score":0.35046503},"labels":[],"label_agreement":null},{"id":"W2042257719","doi":"10.1186/s12879-015-0855-6","title":"Systematic review and mixed treatment comparison meta-analysis of randomized clinical trials of primary oral antifungal prophylaxis in allogeneic hematopoietic cell transplant recipients","year":2015,"lang":"en","type":"review","venue":"BMC Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba","funders":"Pfizer","keywords":"Posaconazole; Medicine; Itraconazole; Voriconazole; Fluconazole; Internal medicine; Aspergillosis; Randomized controlled trial; Interquartile range; Incidence (geometry); Clinical trial; Intensive care medicine; Antifungal; Immunology; Dermatology","score_opus":0.23548275890195164,"score_gpt":0.4520216170054213,"score_spread":0.21653885810346968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042257719","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0038997915,0.98142236,0.00006575318,0.0000025105712,0.00009107472,0.013413172,0.0010185086,0.000027962044,0.000058869155],"genre_scores_gemma":[0.05942086,0.93844706,0.000050960098,0.000018430288,0.000018424582,0.0011471957,0.0007497719,0.000039556646,0.00010774233],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.97167325,0.017229805,0.009278096,0.00081792154,0.0007076389,0.0002933136],"domain_scores_gemma":[0.9854713,0.008000087,0.0047026393,0.0011106516,0.0003703061,0.00034502434],"candidate_categories":["metaepi_narrow","metaepi_broad"],"consensus_categories":["metaepi_broad"],"category_scores_codex":[0.016065309,0.00077961676,0.060814712,0.00068669295,0.000032167554,0.000016381902,0.00017255633,0.00038416413,0.00011753857],"category_scores_gemma":[0.005972949,0.00041998396,0.015624844,0.0010841978,0.00037387243,0.000048182992,0.000042616513,0.00025717297,0.0000056526533],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035306877,0.0031987024,0.025699817,0.8414767,0.1242994,0.000017508411,0.00004273497,0.0000016034627,2.571156e-7,0.0000041874373,0.000032134536,0.0016962918],"study_design_scores_gemma":[0.019583669,0.0006110815,0.00092049415,0.062184688,0.9162634,0.000009433524,0.000011454479,0.000006688413,0.0000013965496,0.0000074864124,0.000108722386,0.0002914946],"about_ca_topic_score_codex":0.0000894408,"about_ca_topic_score_gemma":0.00020063718,"teacher_disagreement_score":0.791964,"about_ca_system_score_codex":0.00026406138,"about_ca_system_score_gemma":0.0011871585,"threshold_uncertainty_score":0.9998252},"labels":[],"label_agreement":null},{"id":"W2043000760","doi":"10.2165/11584810-000000000-00000","title":"Resource Utilization and Cost of Treatment with Anidulafungin or Fluconazole for Candidaemia and Other Forms of Invasive Candidiasis","year":2011,"lang":"en","type":"article","venue":"PharmacoEconomics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Astellas Pharma; Pfizer","keywords":"Anidulafungin; Fluconazole; Invasive candidiasis; Health economics; Pharmacoeconomics; Quality of Life Research; Public health; Resource (disambiguation); Health administration; Medicine; Business; Intensive care medicine; Antifungal; Computer science; Nursing; Caspofungin","score_opus":0.0969956000448805,"score_gpt":0.33484317685723564,"score_spread":0.23784757681235513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043000760","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975039,0.0003418395,0.000183242,0.000025452237,0.000009958545,0.00071844703,0.00015214675,0.0000060973407,0.0010589138],"genre_scores_gemma":[0.99852765,0.00060567085,0.00047564073,0.00015207012,0.000014715747,0.00003415073,0.000015879015,0.000014980829,0.00015926574],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99949795,0.000008356028,0.00019845416,0.00015785969,0.00002737529,0.00011001365],"domain_scores_gemma":[0.99957085,0.000082647486,0.00011834203,0.00010345792,0.000043335574,0.00008135158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008781932,0.0000984881,0.0002696442,0.00004231902,0.000027947342,0.0000035782423,0.000023493656,0.000034301887,0.00007416175],"category_scores_gemma":[0.000014809257,0.0000666728,0.000028775858,0.000030830142,0.000102035454,0.00006440851,0.000009820306,0.000024352385,2.7677618e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011274803,0.000210431,0.9396892,0.0006875787,0.0003704909,0.0000036266688,0.004196097,0.000005313327,0.017669229,0.0005761083,0.00014456757,0.025172522],"study_design_scores_gemma":[0.014754568,0.0039312956,0.090507224,0.00020219937,0.0008611541,0.000035817367,0.004229876,0.0023681142,0.87170774,0.00019981722,0.0108778775,0.0003243449],"about_ca_topic_score_codex":0.00033320326,"about_ca_topic_score_gemma":0.0011910897,"teacher_disagreement_score":0.8540385,"about_ca_system_score_codex":0.0000754086,"about_ca_system_score_gemma":0.00014722274,"threshold_uncertainty_score":0.2718838},"labels":[],"label_agreement":null},{"id":"W2043365114","doi":"10.1139/w08-029","title":"Inhibition of Candida albicans extracellular enzyme activity by selected natural substances and their application in<i>Candida</i>infection","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Centre National de la Recherche Scientifique","keywords":"Candida albicans; Kaempferol; Apigenin; Microbiology; Corpus albicans; Yeast; Enzyme; Biology; Biochemistry; Extracellular; Berberine; Flavonoid; Chemistry","score_opus":0.007141335902523481,"score_gpt":0.2097482886025702,"score_spread":0.20260695270004672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043365114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99277586,0.0062696016,0.00040254372,0.00023847556,0.00007783327,0.00015013029,0.000044070726,0.0000031432853,0.000038326343],"genre_scores_gemma":[0.999373,0.00037669195,0.0000309578,0.000059749054,0.000040310224,0.0000017137904,0.000036175694,0.0000069152798,0.00007446029],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99925613,0.0000671399,0.0002945034,0.00014251191,0.000032572705,0.00020712275],"domain_scores_gemma":[0.99926054,0.000049203372,0.00022243048,0.00008933694,0.00021395466,0.00016452071],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020451966,0.0001055501,0.00032899386,0.00018164862,0.00007254664,0.0000031925642,0.000035494348,0.00013098691,0.00002570402],"category_scores_gemma":[0.00006992343,0.00008600741,0.000054081447,0.00023667068,0.00029121595,0.00008198764,0.00000294891,0.0003027087,6.414063e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014559456,0.000024617293,0.25482443,0.000021755164,0.000019220668,0.000022265367,0.00031294735,9.958862e-7,0.7432139,0.0000061810297,0.00053029234,0.0008778091],"study_design_scores_gemma":[0.0016137157,0.00041139696,0.555748,0.000121698125,0.0000354633,0.001497014,0.00018138447,0.00003399424,0.43525705,0.000045395504,0.0048931283,0.00016178461],"about_ca_topic_score_codex":0.011034081,"about_ca_topic_score_gemma":0.19010021,"teacher_disagreement_score":0.30795687,"about_ca_system_score_codex":0.00021340352,"about_ca_system_score_gemma":0.0007224051,"threshold_uncertainty_score":0.9955515},"labels":[],"label_agreement":null},{"id":"W2044164934","doi":"10.1002/yea.1377","title":"Expression of <i>TPK1</i> and <i>TPK2</i> genes encoding PKA catalytic subunits during growth and morphogenesis in <i>Candida albicans</i>","year":2006,"lang":"en","type":"article","venue":"Yeast","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Agencia Nacional de Promoción Científica y Tecnológica; Consejo Nacional de Investigaciones Científicas y Técnicas","keywords":"Biology; Candida albicans; Mutant; Gene; Yeast; Germ tube; Messenger RNA; Gene expression; Molecular biology; Strain (injury); Polyadenylation; Biochemistry; Genetics; Anatomy","score_opus":0.008125247229915363,"score_gpt":0.21915636686899304,"score_spread":0.21103111963907767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044164934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99528676,0.002448056,0.00003336196,0.00008283038,0.0000312156,0.00019859285,0.000026890642,0.000021175458,0.0018711236],"genre_scores_gemma":[0.9989055,0.00047499905,0.00017108543,0.000050069553,0.00007051932,0.0000084292715,0.000015117358,0.000018636854,0.00028567825],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99888897,0.0000306813,0.00030941947,0.0003196889,0.00020815912,0.00024306288],"domain_scores_gemma":[0.999519,0.000046839126,0.00007909077,0.00020613793,0.00004888162,0.000100036355],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013627777,0.00015606369,0.00034165793,0.00010998465,0.00006788321,0.000012759728,0.000053060096,0.000079053054,0.000013932709],"category_scores_gemma":[0.000045580902,0.00013707907,0.00004134755,0.00021655849,0.0001476399,0.000110143876,0.00006225662,0.0001014302,0.0000014146642],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013108503,0.00005052407,0.43243948,0.00029780134,0.000003493959,0.000030940406,0.00008396103,0.0000012695747,0.5666553,0.000045864846,0.000031976655,0.00022832818],"study_design_scores_gemma":[0.0011153645,0.000049268216,0.5234876,0.00032737243,0.00003616189,0.00004012956,0.0001926657,0.000018210987,0.47446227,0.000063376916,0.000081331826,0.00012619988],"about_ca_topic_score_codex":0.00084530667,"about_ca_topic_score_gemma":0.00038723458,"teacher_disagreement_score":0.09219301,"about_ca_system_score_codex":0.000029033345,"about_ca_system_score_gemma":0.000046220855,"threshold_uncertainty_score":0.5589922},"labels":[],"label_agreement":null},{"id":"W2044333518","doi":"10.1016/s0008-6215(00)00148-8","title":"The first description of a (1→6)-β- -glucan in prokaryotes: (1→6)-β- -glucan is a common component of Actinobacillus suis and is the basis for a serotyping system","year":2000,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Institute for Biological Sciences","funders":"University of Guelph","keywords":"Chemistry; Glucan; Microbiology; Serotype; Component (thermodynamics); Polysaccharide; Biochemistry; Biology","score_opus":0.07550841333879262,"score_gpt":0.3452052457537482,"score_spread":0.2696968324149556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044333518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913458,0.001663045,0.000010556455,0.0038492943,0.000034835673,0.0022009609,0.000056449884,0.000014249699,0.0008247807],"genre_scores_gemma":[0.9983387,0.0007409405,0.000033873628,0.00007347168,0.00004446907,0.00021562308,0.0000058360865,0.000022701766,0.0005244114],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99753004,0.00031599647,0.0005858017,0.00036541262,0.00066684344,0.0005359288],"domain_scores_gemma":[0.9976095,0.0010009166,0.0001124782,0.0007069357,0.00045363614,0.00011654056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029910256,0.00016470427,0.00048303176,0.00016592466,0.0004149464,0.000048470785,0.00026113412,0.000117766336,0.0000333536],"category_scores_gemma":[0.0002508406,0.00009999038,0.000141708,0.00075367553,0.00065058697,0.000080597696,0.00007525079,0.000413002,0.0000038662383],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013641811,0.00088004326,0.72380066,0.011536072,0.0005520951,0.000046126184,0.032009978,0.000025373252,0.16614336,0.0017725708,0.002952319,0.046639614],"study_design_scores_gemma":[0.005677587,0.0025018607,0.7856147,0.007564223,0.00027005895,0.000041480693,0.040086184,0.031758096,0.11673574,0.0008937804,0.008263408,0.00059284444],"about_ca_topic_score_codex":0.0028489355,"about_ca_topic_score_gemma":0.002524402,"teacher_disagreement_score":0.0618141,"about_ca_system_score_codex":0.00032164954,"about_ca_system_score_gemma":0.00025595663,"threshold_uncertainty_score":0.43067575},"labels":[],"label_agreement":null},{"id":"W2044348702","doi":"10.5339/qfarf.2011.bmp5","title":"Posaconazole a Prophylactic Therapy in Cancer Patients: Analysis and Pharmacokinetics","year":2011,"lang":"en","type":"article","venue":"Qatar Foundation Annual Research Forum Proceedings","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Posaconazole; Pharmacokinetics; Pharmacology; Drug; Cancer; Internal medicine; Antifungal; Itraconazole; Dermatology","score_opus":0.08274910519268767,"score_gpt":0.4021459552609325,"score_spread":0.3193968500682448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044348702","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951097,0.0001714843,0.000024840958,0.0008036644,0.00003119229,0.0007547736,0.00002132693,0.00003080348,0.0030522516],"genre_scores_gemma":[0.9977117,0.00081945193,0.00022704616,0.00026231658,0.000038649458,0.000102982565,0.00003860178,0.000018706349,0.0007805109],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979112,0.00003466054,0.00031861488,0.00045844313,0.000755569,0.0005215072],"domain_scores_gemma":[0.9979747,0.000043458702,0.000075924196,0.00012117736,0.0015759482,0.00020878745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089126977,0.00014709872,0.00027446274,0.0006996095,0.00016084664,0.00006269615,0.00012457302,0.000085900305,0.00074800214],"category_scores_gemma":[0.0004131971,0.000121652425,0.00006899707,0.0017129706,0.00026987752,0.0005864873,0.00007967999,0.00041552613,0.000030253312],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014734967,0.0005965744,0.9593749,0.000108189925,0.0001231789,0.0000036248239,0.0030066627,7.7331684e-8,0.0024747082,0.00042444214,0.00040552387,0.032008637],"study_design_scores_gemma":[0.0018013826,0.0011207819,0.9849192,0.00004021731,0.00007462515,9.0569455e-7,0.0027452046,0.00027571776,0.004582154,0.00046480144,0.0038283889,0.00014663741],"about_ca_topic_score_codex":0.0010243264,"about_ca_topic_score_gemma":0.000351104,"teacher_disagreement_score":0.031862,"about_ca_system_score_codex":0.00020539663,"about_ca_system_score_gemma":0.00017165924,"threshold_uncertainty_score":0.8190099},"labels":[],"label_agreement":null},{"id":"W2044530416","doi":"10.1111/petr.12294","title":"Successful lung transplant in a child with cystic fibrosis and persistent <i>Blastobotrys rhaffinosifermentans</i> infection","year":2014,"lang":"en","type":"article","venue":"Pediatric Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University Health Network; University of Alberta","funders":"","keywords":"Medicine; Cystic fibrosis; Colonization; Lung transplantation; Lung; Antifungal; Transplantation; Intensive care medicine; Pediatrics; Immunology; Internal medicine; Microbiology; Dermatology; Biology","score_opus":0.004468875421814503,"score_gpt":0.21509617922740104,"score_spread":0.21062730380558653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044530416","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99050057,0.0002998781,0.0077818604,0.0001870187,0.000055089706,0.00042111968,0.000027936421,0.000060827922,0.0006657218],"genre_scores_gemma":[0.99440384,0.004890546,0.0002946604,0.0000878017,0.0001258051,0.00003108905,0.0001267894,0.000018080818,0.000021369582],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987559,0.00007266168,0.00028041366,0.00036346473,0.00027721547,0.00025034338],"domain_scores_gemma":[0.9995493,0.00009884513,0.00006254947,0.00013100619,0.000038470447,0.000119770695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020770157,0.00018581269,0.0002596531,0.00020207104,0.00010600008,0.000023763394,0.000034640205,0.000095650605,0.00002107991],"category_scores_gemma":[0.000011440531,0.00015397997,0.00007208243,0.0003418661,0.00004546956,0.000174765,0.0000027241838,0.00020336932,0.000004482985],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015299517,0.00013936721,0.9949039,0.0015615129,0.000017796763,0.000038492562,0.0008719448,0.00020489565,0.000353144,0.0000342149,0.000009191799,0.00033555494],"study_design_scores_gemma":[0.0028419506,0.0005393726,0.99344295,0.0002073153,0.0008252667,0.00028645416,0.00005594482,0.0013009377,0.0002955134,0.0000082429515,0.000013010874,0.00018304288],"about_ca_topic_score_codex":0.0002427677,"about_ca_topic_score_gemma":0.0005651181,"teacher_disagreement_score":0.0074872,"about_ca_system_score_codex":0.00006813684,"about_ca_system_score_gemma":0.000040188155,"threshold_uncertainty_score":0.6279121},"labels":[],"label_agreement":null},{"id":"W2045507047","doi":"10.1371/journal.ppat.1001069","title":"PKC Signaling Regulates Drug Resistance of the Fungal Pathogen Candida albicans via Circuitry Comprised of Mkc1, Calcineurin, and Hsp90","year":2010,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":337,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; U.S. Public Health Service; Burroughs Wellcome Fund","keywords":"Candida albicans; Ergosterol; Calcineurin; Biology; Protein kinase C; Corpus albicans; Antifungal drug; Microbiology; Protein kinase A; Cell biology; Kinase; Drug resistance; Biochemistry; Transplantation; Medicine","score_opus":0.010908703191944032,"score_gpt":0.22727022206878847,"score_spread":0.21636151887684443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045507047","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99718267,0.00055859936,0.000056420995,0.00031901576,0.00012751242,0.0005277844,0.00022545592,0.000032965985,0.00096959574],"genre_scores_gemma":[0.99803853,0.000039147984,0.0006044202,0.0001163574,0.00010263408,0.000011594866,0.000014151475,0.00003444013,0.0010387313],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998,0.00011676898,0.00058985886,0.0004334021,0.0005244951,0.00033544246],"domain_scores_gemma":[0.9980809,0.00023666293,0.00029622755,0.0008872347,0.00031721892,0.00018172665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041158876,0.00023589394,0.0006138458,0.000069076435,0.00014314512,0.000009012074,0.00022056283,0.00014357369,0.00013131143],"category_scores_gemma":[0.0003556072,0.00017069635,0.00021206257,0.00028406375,0.0005107188,0.00005125147,0.000086991575,0.0004327216,0.000002359634],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016925206,0.00015456372,0.2881814,0.00036078904,0.00005629147,0.000022652615,0.00055253145,0.0000011547913,0.7101307,0.00010848953,0.00008763079,0.00017456699],"study_design_scores_gemma":[0.0009868112,0.000065464,0.51479036,0.00032431507,0.00030755493,0.000018569706,0.00031062515,0.00013179428,0.48220024,0.00039479864,0.00026494527,0.00020454453],"about_ca_topic_score_codex":0.00006214156,"about_ca_topic_score_gemma":0.00066718005,"teacher_disagreement_score":0.22793043,"about_ca_system_score_codex":0.000028688646,"about_ca_system_score_gemma":0.00018240327,"threshold_uncertainty_score":0.69607955},"labels":[],"label_agreement":null},{"id":"W2045876940","doi":"10.1016/j.diagmicrobio.2013.03.002","title":"Outcomes of persons with blastomycosis involving the central nervous system","year":2013,"lang":"en","type":"article","venue":"Diagnostic Microbiology and Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canada Research Chairs","keywords":"Blastomycosis; Blastomyces; Blastomyces dermatitidis; Voriconazole; Amphotericin B; Medicine; Magnetic resonance imaging; Central nervous system; Dimorphic fungus; Mycosis; Pathology; Biopsy; Dermatology; Radiology; Surgery; Internal medicine; Antifungal; Biology","score_opus":0.004996071699664901,"score_gpt":0.20722553266305496,"score_spread":0.20222946096339006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045876940","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972931,0.001125183,0.000076358934,0.00045107928,0.00007850571,0.0005688371,0.000045599027,0.00004509307,0.00031623602],"genre_scores_gemma":[0.9991921,0.00009175856,0.000013880546,0.00048888027,0.000028687004,0.000054437223,0.00002221388,0.0000095963605,0.000098402845],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99924177,0.00007840646,0.00017622847,0.00021161119,0.000041466898,0.00025050977],"domain_scores_gemma":[0.9987397,0.0006882061,0.000073216615,0.00023562532,0.00009255464,0.0001706665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007408927,0.00013999654,0.00028614214,0.000038550956,0.00014526474,0.000011938077,0.000049572463,0.00006297216,0.00010351261],"category_scores_gemma":[0.00054159167,0.00007564899,0.00008318469,0.000080740145,0.00039958092,0.00005078679,0.000029550967,0.00011895724,0.000018315048],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077333694,0.00013966627,0.9948313,0.00023805833,0.00012614927,0.00001882051,0.00019408275,0.0000029581324,0.0028842334,0.00045365837,0.0008013913,0.00023230189],"study_design_scores_gemma":[0.00059790415,0.00020386168,0.9976934,0.00013919061,0.00027758328,0.00005012933,0.0006159191,0.000026462243,0.00019160056,0.00002095047,0.00009467353,0.0000883245],"about_ca_topic_score_codex":0.0003131852,"about_ca_topic_score_gemma":0.00011192352,"teacher_disagreement_score":0.0028620544,"about_ca_system_score_codex":0.00003759896,"about_ca_system_score_gemma":0.00008812216,"threshold_uncertainty_score":0.30848762},"labels":[],"label_agreement":null},{"id":"W2045973287","doi":"10.1016/s1053-2498(02)00394-7","title":"Small bowel infarction secondary to aspergillosis in a post–cardiac transplant patient: a case report","year":2002,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Medicine; Immunosuppression; Aspergillosis; Bowel infarction; Intensive care medicine; Presentation (obstetrics); Myocardial infarction; Transplantation; Internal medicine; Surgery; Immunology","score_opus":0.015037167366545376,"score_gpt":0.24729825959971563,"score_spread":0.23226109223317026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045973287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958275,0.0010559971,0.00023883111,0.0022275308,0.00011004483,0.00025554767,0.000020025578,0.0000064685873,0.00025805482],"genre_scores_gemma":[0.9979391,0.0011817422,0.00033556452,0.0004213362,0.00005334632,0.000002382563,0.0000083614,0.00000814083,0.00005003612],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99900776,0.00010766733,0.0004528905,0.00010085628,0.00019256935,0.00013826371],"domain_scores_gemma":[0.9994981,0.00009423612,0.00008618549,0.00010662868,0.00010600394,0.00010881922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054834445,0.00009616005,0.00023121941,0.00014469968,0.00008597063,0.000011049447,0.000025515155,0.000054150853,0.00006603086],"category_scores_gemma":[0.000020419684,0.00006455937,0.00009432932,0.00013422078,0.00003056702,0.00012345123,0.000002224671,0.00026526395,0.0000026994185],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.020178316,0.0010510088,0.60798156,0.0019436411,0.000624156,0.055881295,0.11206026,0.00027762548,0.17514676,0.00006225053,0.0018643589,0.022928761],"study_design_scores_gemma":[0.0016182783,0.0012455756,0.86107814,0.0005472742,0.0006227481,0.1294654,0.0014903543,0.00021050085,0.003146512,0.000023649145,0.0004034521,0.00014811436],"about_ca_topic_score_codex":0.00016812672,"about_ca_topic_score_gemma":0.00035783634,"teacher_disagreement_score":0.25309655,"about_ca_system_score_codex":0.00003737026,"about_ca_system_score_gemma":0.000035377147,"threshold_uncertainty_score":0.26326546},"labels":[],"label_agreement":null},{"id":"W2046012592","doi":"10.1021/id5000212","title":"Chemical Genomics-Based Antifungal Drug Discovery: Targeting Glycosylphosphatidylinositol (GPI) Precursor Biosynthesis","year":2014,"lang":"en","type":"article","venue":"ACS Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Genome Canada","keywords":"Candida albicans; Drug discovery; Biology; Antifungal drug; Computational biology; Saccharomyces cerevisiae; Phenotypic screening; Antifungal; Mutant; Synthetic lethality; Antifungal drugs; Enzyme; Model organism; Biochemistry; Microbiology; Gene; Phenotype","score_opus":0.00591225959439191,"score_gpt":0.2394391597903993,"score_spread":0.2335269001960074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046012592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99450415,0.0009277211,0.0012032387,0.00029945088,0.00029931185,0.00052997447,0.0001101277,0.000365867,0.0017601714],"genre_scores_gemma":[0.99776,0.000078587946,0.00022132303,0.0008408806,0.00053754845,0.000046438687,0.0001421655,0.00006390104,0.00030915256],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99774635,0.000117438176,0.00045943772,0.00069628155,0.00042817747,0.0005523202],"domain_scores_gemma":[0.998059,0.00059837033,0.00016434971,0.00063449325,0.00016892207,0.000374895],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027539086,0.00036568462,0.0005897362,0.00010424616,0.00025408762,0.00012667765,0.00018397743,0.00013917463,0.00017841702],"category_scores_gemma":[0.0018873089,0.0003218776,0.00036634764,0.00026492903,0.00025805875,0.00026679735,0.00007425439,0.00025721383,0.00013222503],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006627274,0.0010131897,0.9268252,0.0003825509,0.00012087707,0.000021689104,0.000056395653,0.000027092552,0.061553564,0.00038763823,0.005084237,0.0038648306],"study_design_scores_gemma":[0.004213066,0.00044517545,0.39641982,0.00048740814,0.0011829933,0.000016863993,0.00015444662,0.0018751143,0.5840403,0.00094368716,0.009038283,0.001182856],"about_ca_topic_score_codex":0.00007597388,"about_ca_topic_score_gemma":0.000023748047,"teacher_disagreement_score":0.53040534,"about_ca_system_score_codex":0.0002568068,"about_ca_system_score_gemma":0.00031017564,"threshold_uncertainty_score":0.99992335},"labels":[],"label_agreement":null},{"id":"W2046989999","doi":"10.1016/s0885-3924(01)00368-2","title":"Methadone and Fluconazole","year":2002,"lang":"en","type":"article","venue":"Journal of Pain and Symptom Management","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Grey Nuns Community Hospital","funders":"","keywords":"Fluconazole; Medicine; Methadone; (+)-Naloxone; Depression (economics); Cancer pain; Anesthesia; Palliative care; Respiratory system; Opioid; Cancer; Intensive care medicine; Antifungal; Internal medicine; Nursing; Receptor; Dermatology","score_opus":0.015933759065709076,"score_gpt":0.24967542112852467,"score_spread":0.2337416620628156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046989999","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.974356,0.005828253,0.0022674748,0.0030173513,0.0000739406,0.0001541528,6.1043573e-7,0.000008991593,0.0142932115],"genre_scores_gemma":[0.9908463,0.0026116585,0.0015600721,0.000954642,0.00006866271,7.0768897e-7,2.439282e-7,0.0000050033605,0.003952736],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9992989,0.000058611273,0.00024014707,0.00009208034,0.0002017657,0.00010853646],"domain_scores_gemma":[0.9995988,0.000056259374,0.000083963496,0.00009544716,0.0000463526,0.000119161145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010143835,0.00007160289,0.00021009606,0.000085117535,0.0000403599,0.00001888505,0.000032644763,0.000027200631,0.00017703288],"category_scores_gemma":[0.000049084454,0.00005157618,0.000055187138,0.00005988123,0.000049766033,0.000060663693,0.00002560284,0.00010001123,0.0000043612517],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003655637,0.00059216755,0.40758568,0.001182816,0.0008153427,0.0010161268,0.0014867838,0.0000020550228,0.0021953238,0.0048849653,0.03999858,0.5398746],"study_design_scores_gemma":[0.0035047927,0.0011629089,0.8932128,0.0004376747,0.00038328822,0.00016589824,0.0025944202,0.0015061655,0.00012916539,0.0009946554,0.09571656,0.00019167007],"about_ca_topic_score_codex":0.0000013199713,"about_ca_topic_score_gemma":0.0000013287843,"teacher_disagreement_score":0.5396829,"about_ca_system_score_codex":0.00002040122,"about_ca_system_score_gemma":0.0000034264317,"threshold_uncertainty_score":0.21032155},"labels":[],"label_agreement":null},{"id":"W2047133125","doi":"10.1016/j.ejmech.2011.06.012","title":"New azole antifungal agents with novel modes of action: Synthesis and biological studies of new tridentate ligands based on pyrazole and triazole","year":2011,"lang":"en","type":"article","venue":"European Journal of Medicinal Chemistry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Chemistry; Pyrazole; Azole; Yeast; Mechanism of action; Triazole; Saccharomyces cerevisiae; Cell cycle; DNA; Biochemistry; Combinatorial chemistry; Stereochemistry; Antifungal; Cell; In vitro; Microbiology; Biology","score_opus":0.16523659559781892,"score_gpt":0.32783378584089784,"score_spread":0.16259719024307892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047133125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957015,0.0013497078,0.0006803118,0.00018243254,0.00003640827,0.00006431536,0.000006077832,0.000006025805,0.0019732234],"genre_scores_gemma":[0.9973859,0.0008302832,0.001237762,0.00006812876,0.00020085931,2.1018359e-7,9.384348e-7,0.000013811252,0.00026208046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868625,0.000040556082,0.00056563085,0.00018006029,0.00038878788,0.00013871733],"domain_scores_gemma":[0.9987273,0.00015739581,0.00048383785,0.00016201615,0.0001785491,0.00029089654],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008212206,0.00016928825,0.0006127466,0.000058166082,0.000036413287,0.000004399995,0.000101419915,0.00003964658,0.00013104382],"category_scores_gemma":[0.0005111767,0.00010451722,0.000089472735,0.000100901016,0.00030885354,0.000060049446,0.000028855586,0.00026204158,4.1640553e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.018510623,0.00044348606,0.11035536,0.0008829178,0.00047322526,0.0004765276,0.0011360933,0.000008058496,0.8517677,0.0000034956179,0.0018428146,0.0140996715],"study_design_scores_gemma":[0.0053598857,0.0018681374,0.2306315,0.0018545862,0.0003819931,0.0002611802,0.0030026608,0.000048578306,0.7564008,0.000009485509,0.00007248209,0.00010866998],"about_ca_topic_score_codex":0.000008205872,"about_ca_topic_score_gemma":7.1461477e-7,"teacher_disagreement_score":0.12027614,"about_ca_system_score_codex":0.000021976097,"about_ca_system_score_gemma":0.00017388846,"threshold_uncertainty_score":0.42620885},"labels":[],"label_agreement":null},{"id":"W2047772998","doi":"10.1007/s00134-004-2316-3","title":"Practices in non-neutropenic ICU patients with Candida-positive airway specimens","year":2004,"lang":"en","type":"article","venue":"Intensive Care Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire en santé mentale de Montréal","funders":"Pfizer","keywords":"Medicine; Pain medicine; Anesthesiology; Intensive care medicine; Fungemia; Neutropenia; Intensive care; Emergency medicine; Anesthesia; Internal medicine; Mycosis; Surgery; Chemotherapy","score_opus":0.01352078999218459,"score_gpt":0.2950767677905994,"score_spread":0.2815559777984148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047772998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.983165,0.0007118772,0.00007785685,0.006040355,0.00024385042,0.0009941842,0.000021890215,0.00002978332,0.008715178],"genre_scores_gemma":[0.99308795,0.00007722974,0.00012199915,0.00592967,0.00022286283,0.000019843357,0.00015931675,0.000031511583,0.00034962612],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998067,0.00004355551,0.00038445083,0.0005338254,0.0005742895,0.0003968597],"domain_scores_gemma":[0.9946323,0.00014551307,0.00029527576,0.00043313176,0.0042687524,0.00022501628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013915557,0.00027974017,0.00066071254,0.0001833123,0.000068732355,0.000008613659,0.00011135618,0.000104358696,0.0001451087],"category_scores_gemma":[0.0022278072,0.00017706287,0.00006550177,0.00039275858,0.00042849142,0.00015466845,0.000042429216,0.00049788004,0.000063362924],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003857561,0.00020783364,0.974821,0.00019135264,0.00013638995,0.0013079525,0.012916596,0.000011992509,0.003405852,0.000063501146,0.0020553768,0.0010246359],"study_design_scores_gemma":[0.009523732,0.0036167486,0.94541603,0.0021382947,0.00020551491,0.00002885824,0.035644535,0.0000017310895,0.0026588996,0.000024295081,0.00053544913,0.00020590106],"about_ca_topic_score_codex":0.002145062,"about_ca_topic_score_gemma":0.003867737,"teacher_disagreement_score":0.029404918,"about_ca_system_score_codex":0.00063540315,"about_ca_system_score_gemma":0.00027219096,"threshold_uncertainty_score":0.7220414},"labels":[],"label_agreement":null},{"id":"W2048245066","doi":"10.1016/j.mib.2013.07.012","title":"The crucial role of iron uptake in Aspergillus fumigatus virulence","year":2013,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Siderophore; Aspergillus fumigatus; Biology; Virulence; Microbiology; Iron homeostasis; Pathogen; Virulence factor; Gene; Biochemistry","score_opus":0.06718644206942834,"score_gpt":0.38458366468404387,"score_spread":0.31739722261461556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048245066","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017708286,0.9936767,0.0000024154008,0.000027996628,0.0030596354,0.0012138783,0.00008198213,0.000010463628,0.00015605452],"genre_scores_gemma":[0.0008487515,0.99834013,0.00002305904,0.000005827161,0.000283803,0.00010580857,0.00029673416,0.000022082852,0.00007380167],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99733895,0.0003557114,0.0012308671,0.00053538143,0.000080259175,0.0004588575],"domain_scores_gemma":[0.99863935,0.00027595347,0.00038738473,0.0005577405,0.000076246455,0.00006335165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005195075,0.00034690803,0.0016167979,0.00019080978,0.00004650516,0.000008664448,0.00036556952,0.00047388175,0.000104263745],"category_scores_gemma":[0.0002543995,0.0002173321,0.00035455803,0.0003174401,0.00042081706,0.00003219834,0.00014646111,0.0009176002,0.0001308674],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005484679,0.00016348108,0.0010742845,0.0094766375,0.000018508597,8.0524194e-7,0.000063016785,1.458974e-7,0.00036492661,0.00032468454,0.0008418465,0.98761684],"study_design_scores_gemma":[0.00036983547,0.00010369956,0.0013695941,0.0141009735,0.000040275507,0.000020395806,0.000060296043,0.0000020188195,0.00000840952,0.00006606739,0.9836803,0.00017809712],"about_ca_topic_score_codex":0.00004705123,"about_ca_topic_score_gemma":0.00007087563,"teacher_disagreement_score":0.98743874,"about_ca_system_score_codex":0.0002271675,"about_ca_system_score_gemma":0.00046870075,"threshold_uncertainty_score":0.88625455},"labels":[],"label_agreement":null},{"id":"W2048396706","doi":"10.1007/s00253-009-2174-6","title":"Inhibition of Candida albicans growth by brominated furanones","year":2009,"lang":"en","type":"article","venue":"Applied Microbiology and Biotechnology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Research Council Canada; Syracuse University","keywords":"Candida albicans; Corpus albicans; Echinocandins; Virulence; Microbiology; Biology; Gene; Fungicide; Chemistry; Antifungal; Amphotericin B; Biochemistry; Caspofungin","score_opus":0.004066517309207065,"score_gpt":0.20975457576307532,"score_spread":0.20568805845386826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048396706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994104,0.0006333733,0.00020437104,0.0036345096,0.000020658428,0.00023258143,0.000043826465,0.000078397905,0.0010482327],"genre_scores_gemma":[0.99820286,0.00039980275,0.00034010055,0.00076454226,0.00000995206,0.000003981796,0.00014201867,0.000005084415,0.0001316612],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992125,0.00001069039,0.00022959162,0.0003021551,0.000022173555,0.0002228705],"domain_scores_gemma":[0.9996433,0.000027676582,0.00007872961,0.00017410956,0.000040149785,0.000036001707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000092851194,0.00013135438,0.00036236923,0.000101479054,0.000054102766,0.0000016414202,0.000050215054,0.00063255266,0.000048180078],"category_scores_gemma":[0.000025149737,0.00010589771,0.00003774516,0.00017442949,0.00063184917,0.000014043148,0.000023442975,0.00023194522,0.000007781736],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037054849,0.000119278375,0.0016656731,0.000031587184,0.000025794068,0.0000062211916,0.000030350786,7.0764443e-9,0.98430187,0.007135302,0.0013021462,0.005011202],"study_design_scores_gemma":[0.0010553638,0.0005436343,0.006834654,0.000020802363,0.00004476156,0.00009351845,0.00012236995,5.544462e-7,0.9882006,0.0013848331,0.0015901901,0.00010868757],"about_ca_topic_score_codex":0.000026441876,"about_ca_topic_score_gemma":0.00002691259,"teacher_disagreement_score":0.0057504685,"about_ca_system_score_codex":0.000018658682,"about_ca_system_score_gemma":0.000028735005,"threshold_uncertainty_score":0.48788252},"labels":[],"label_agreement":null},{"id":"W2048550577","doi":"10.1371/journal.ppat.1003575","title":"Aspergillus Galactosaminogalactan Mediates Adherence to Host Constituents and Conceals Hyphal β-Glucan from the Immune System","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":326,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Advancing Translational Sciences; Cystic Fibrosis Canada; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Agence Nationale de la Recherche","keywords":"Aspergillus fumigatus; Virulence; Microbiology; Biology; Bacterial adhesin; Virulence factor; Immune system; Aspergillosis; Immunology; Gene; Genetics","score_opus":0.02447435875190619,"score_gpt":0.24937127873836773,"score_spread":0.22489691998646155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048550577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931701,0.0018496652,0.00003323093,0.0007453455,0.00020872618,0.0011627405,0.00026987187,0.00009536262,0.002464994],"genre_scores_gemma":[0.99856037,0.00010000539,0.00030849522,0.00040770584,0.00019583936,0.000089389876,0.000046286415,0.000024080393,0.00026783245],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981672,0.00011200335,0.00041842085,0.0004709303,0.00042840754,0.00040303948],"domain_scores_gemma":[0.99826425,0.00041367512,0.00011090406,0.00060727855,0.00022930208,0.0003745581],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019763604,0.0002507123,0.0005140051,0.000035667574,0.00019333439,0.00006702088,0.00018687273,0.0001181526,0.0004768537],"category_scores_gemma":[0.00051550363,0.00016303317,0.00009593431,0.0001572766,0.0002852906,0.00011143804,0.000102134596,0.00021952469,0.00054193765],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009379452,0.00008873761,0.5575221,0.00008709209,0.00011027955,0.000054423417,0.00080250116,1.1044157e-7,0.4398062,0.00024162364,0.00025164447,0.00094149145],"study_design_scores_gemma":[0.00084130384,0.0002923726,0.9650943,0.00047583276,0.00019596209,0.000018194514,0.0036992193,0.000106256965,0.028821392,0.000020485546,0.00020893468,0.00022573497],"about_ca_topic_score_codex":0.00085325877,"about_ca_topic_score_gemma":0.00015988966,"teacher_disagreement_score":0.4109848,"about_ca_system_score_codex":0.00010280462,"about_ca_system_score_gemma":0.00012975902,"threshold_uncertainty_score":0.6965693},"labels":[],"label_agreement":null},{"id":"W2049211033","doi":"10.1155/2014/371631","title":"<i>Candida glabrata</i>Esophagitis: Are We Seeing the Emergence of a New Azole-Resistant Pathogen?","year":2014,"lang":"en","type":"article","venue":"International Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Candida glabrata; Esophagitis; Azole; Internal medicine; Medicine; Pathogen; Microbiology; Incidence (geometry); Reflux esophagitis; Risk factor; Antifungal; Gastroenterology; Dermatology; Biology; Immunology; Disease","score_opus":0.017069664743405728,"score_gpt":0.2845225621240758,"score_spread":0.2674528973806701,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049211033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981545,0.00494774,0.0035209039,0.008232266,0.0011433134,0.00010212545,0.00006852256,0.000007001426,0.00043316116],"genre_scores_gemma":[0.9969127,0.00055983535,0.00054287515,0.0009150991,0.000493404,6.510045e-7,0.000009820311,0.000008939364,0.00055668276],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987695,0.00010508981,0.0006366016,0.00013925985,0.00019222475,0.00015733173],"domain_scores_gemma":[0.9983702,0.00014483108,0.000623305,0.00018142558,0.0005980343,0.000082257975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000510876,0.00011510931,0.0003372882,0.000096352785,0.000036599955,0.000010582268,0.00039906008,0.00007821084,0.00032339254],"category_scores_gemma":[0.00033398625,0.0000725337,0.0002127193,0.00008248171,0.00015651638,0.000065035936,0.00006177178,0.00025686927,0.000010751017],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012384388,0.000111112764,0.052791648,0.000030016117,0.00029415725,0.00009144545,0.00033870802,0.000017622884,0.92260844,0.00052112975,0.017387316,0.004569979],"study_design_scores_gemma":[0.01075514,0.002994269,0.37210986,0.0031438775,0.00064601324,0.005528379,0.0046424246,0.00015960912,0.25702453,0.0058507384,0.33644602,0.00069915963],"about_ca_topic_score_codex":0.000037001126,"about_ca_topic_score_gemma":0.000102613936,"teacher_disagreement_score":0.6655839,"about_ca_system_score_codex":0.000044876826,"about_ca_system_score_gemma":0.00021666821,"threshold_uncertainty_score":0.35409215},"labels":[],"label_agreement":null},{"id":"W2049802119","doi":"10.1128/ec.00320-13","title":"Ste18p Is a Positive Control Element in the Mating Process of Candida albicans","year":2014,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Canadian Institutes of Health Research","keywords":"Heterotrimeric G protein; Biology; Protein subunit; Gene; Candida albicans; Genetics; Cell biology; Ectopic expression; G protein; Signal transduction","score_opus":0.006579010004342584,"score_gpt":0.25854570999046944,"score_spread":0.25196669998612686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049802119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97527146,0.00009792768,0.0007668431,0.0010175165,0.000024340767,0.00050225895,0.000011409209,0.000007507716,0.022300707],"genre_scores_gemma":[0.9976907,0.000005400664,0.00008273531,0.0016318897,0.00004527522,0.000012842369,0.0000060786456,0.000007806588,0.00051729986],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989739,0.00006909275,0.000284591,0.00017677963,0.0002938416,0.00020180675],"domain_scores_gemma":[0.9993181,0.00021304948,0.000094566065,0.00025101166,0.00007757103,0.000045665267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005667124,0.00009693131,0.00025771707,0.00003401231,0.0000369974,0.00000703722,0.000101443315,0.000035841713,0.00021228619],"category_scores_gemma":[0.000095516996,0.00006279024,0.0000632151,0.00013799283,0.00006277202,0.000027781529,0.000009958512,0.00014617553,0.00001381169],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026505283,0.00036562787,0.98841304,0.00044369645,0.000023285043,0.00001470182,0.0067907404,0.000015771393,0.0014302218,0.00021452022,0.00042933386,0.0015940384],"study_design_scores_gemma":[0.0021839745,0.0004355866,0.9861397,0.00016012909,0.00008472977,0.0000037125833,0.0039944816,0.0022249203,0.004411166,0.00021038574,0.000061690946,0.00008953391],"about_ca_topic_score_codex":0.0002869542,"about_ca_topic_score_gemma":0.00022855264,"teacher_disagreement_score":0.022419183,"about_ca_system_score_codex":0.00004138509,"about_ca_system_score_gemma":0.00008406169,"threshold_uncertainty_score":0.25605115},"labels":[],"label_agreement":null},{"id":"W2049814547","doi":"10.1016/j.transproceed.2014.07.072","title":"Case Report of Vertebral Osteomyelitis and Mycotic Abdominal Aortic Aneurysm Caused by Scedosporium apiospermum in a Lung Transplant Patient With Cystic Fibrosis","year":2015,"lang":"en","type":"article","venue":"Transplantation Proceedings","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary","funders":"","keywords":"Scedosporium apiospermum; Medicine; Mycotic aneurysm; Surgery; Vertebral osteomyelitis; Transplantation; Cystic fibrosis; Osteomyelitis; Lung transplantation; Lung; Discitis; Voriconazole; Aneurysm; Radiology; Antifungal; Dermatology; Internal medicine","score_opus":0.010877595574629634,"score_gpt":0.23927367431704658,"score_spread":0.22839607874241694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049814547","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981569,0.00019328145,0.00037475507,0.00019638299,0.000038016282,0.00063024304,0.00009690217,0.00003882318,0.00027471187],"genre_scores_gemma":[0.9991087,0.000056080036,0.00051377417,0.000048949572,0.00002602996,0.00003094682,0.000113201204,0.000024170185,0.00007818265],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99823195,0.000015151981,0.00060130545,0.00042092457,0.00043890555,0.00029177195],"domain_scores_gemma":[0.9991945,0.00004291288,0.00016284527,0.00010669018,0.00023969628,0.00025336936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025839554,0.00021938756,0.00042966346,0.00012728864,0.000044808352,0.000019396319,0.000040196355,0.00010054707,0.000017818156],"category_scores_gemma":[0.000040603343,0.00018364193,0.000045988698,0.0002789811,0.00014280314,0.0002577113,0.00000394777,0.00017690072,0.0000014049753],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010434665,0.0002740537,0.70885,0.0074083824,0.00009713765,0.13671641,0.036370162,0.000007937013,0.0985659,0.000082135615,0.00022806805,0.0009651287],"study_design_scores_gemma":[0.02006167,0.0052385796,0.39404958,0.0033830584,0.0022225897,0.48387167,0.010333383,0.003352027,0.07624893,0.00011124514,0.000032513064,0.0010947696],"about_ca_topic_score_codex":0.00032481484,"about_ca_topic_score_gemma":0.00013826996,"teacher_disagreement_score":0.34715524,"about_ca_system_score_codex":0.00008751014,"about_ca_system_score_gemma":0.00014228377,"threshold_uncertainty_score":0.74887},"labels":[],"label_agreement":null},{"id":"W2050636630","doi":"10.1371/journal.ppat.1003498","title":"Pathogenic Yeasts Deploy Cell Surface Receptors to Acquire Iron in Vertebrate Hosts","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Siderophore; Biology; Ferrous; Microbiology; Context (archaeology); Biochemistry; Extracellular; Cell biology; Chemistry; Gene","score_opus":0.014366516691288475,"score_gpt":0.23798432844840972,"score_spread":0.22361781175712125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050636630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995989,0.000358974,0.00003218492,0.00056471955,0.00018178672,0.0011296003,0.000025684958,0.00016922971,0.0015488028],"genre_scores_gemma":[0.99462956,0.00009957232,0.0017804202,0.00075815,0.00008152277,0.0000524158,0.000020569181,0.000084180916,0.0024935952],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99775,0.000117035444,0.00042196663,0.00063357357,0.00043154098,0.0006459175],"domain_scores_gemma":[0.99857944,0.000063742445,0.00007052577,0.00066976284,0.00016151252,0.0004550191],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00023109377,0.0002874476,0.00047345695,0.00010857823,0.0000702313,0.000030626565,0.0001725023,0.0001865071,0.0010331547],"category_scores_gemma":[0.0002034961,0.0002567076,0.00015027604,0.0004710568,0.00005734644,0.00015869174,0.000089973735,0.00025700312,0.0047054705],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000889987,0.00033992121,0.45682666,0.00011113164,0.000010518971,0.000068562964,0.00050221814,0.000010938963,0.5390076,0.0000044005405,0.0015810039,0.0014480797],"study_design_scores_gemma":[0.0017750816,0.0006654815,0.90621686,0.00034690124,0.00011495465,0.0000098366845,0.0010454748,0.0009828908,0.08730865,0.00006284525,0.0008068831,0.00066413876],"about_ca_topic_score_codex":0.000066603214,"about_ca_topic_score_gemma":0.00016249884,"teacher_disagreement_score":0.45169893,"about_ca_system_score_codex":0.00020369326,"about_ca_system_score_gemma":0.00013731737,"threshold_uncertainty_score":0.9999885},"labels":[],"label_agreement":null},{"id":"W2051336715","doi":"10.1128/jcm.43.12.6215-6216.2005","title":"5-Fluorouracil Altered Morphology and Inhibited Growth of <i>Candida albicans</i>","year":2005,"lang":"en","type":"letter","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; International Centre for Infectious Diseases","funders":"Lady Tata Memorial Trust","keywords":"Candida albicans; Biology; Microbiology; Human immunodeficiency virus (HIV); Cancer; Virology; Mycosis; Immunology; Genetics","score_opus":0.04116858221061787,"score_gpt":0.34953067699761026,"score_spread":0.3083620947869924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051336715","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7107308,0.0023380683,0.00005145722,0.28508347,0.0010059394,0.0002384089,0.00013997873,0.000009375656,0.00040251235],"genre_scores_gemma":[0.38223666,0.003969518,0.002506033,0.59816164,0.010882251,0.0000020624914,0.00018930955,0.00006690094,0.0019856405],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.994888,0.000511441,0.0035357545,0.00046814367,0.00014932742,0.00044734997],"domain_scores_gemma":[0.9941148,0.001789418,0.0026149184,0.0004062372,0.00087768247,0.00019694614],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0017440431,0.00036173742,0.003105185,0.00024852125,0.00003260021,0.0000074957265,0.00028270175,0.0021856593,0.00047788967],"category_scores_gemma":[0.0021798986,0.00025840278,0.00087823765,0.00013499166,0.0012434098,0.000062613275,0.00010551002,0.0044307606,0.000015991425],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023771815,0.00029589422,0.06563689,0.0003684152,0.0006349655,0.0008388368,0.000032405856,7.99561e-8,0.053154532,0.000008027675,0.8734919,0.0031609002],"study_design_scores_gemma":[0.0075719133,0.0057906737,0.04691135,0.00082019967,0.0012208611,0.007729929,0.00003094574,0.0000014076937,0.0022142944,0.00028975453,0.9269869,0.0004318065],"about_ca_topic_score_codex":0.000021413614,"about_ca_topic_score_gemma":0.000015583235,"teacher_disagreement_score":0.3284941,"about_ca_system_score_codex":0.000058357287,"about_ca_system_score_gemma":0.00059989624,"threshold_uncertainty_score":0.9999868},"labels":[],"label_agreement":null},{"id":"W2051629697","doi":"10.1097/00006454-200006000-00002","title":"Systemic Candida infection in extremely low birth weight infants: short term morbidity and long term neurodevelopmental outcome","year":2000,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":185,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Pediatrics; Low birth weight; Gestational age; Birth weight; Retinopathy of prematurity; Case fatality rate; Incidence (geometry); Cohort; Sepsis; Periventricular leukomalacia; Neonatal intensive care unit; Surgery; Epidemiology; Pregnancy; Internal medicine","score_opus":0.012800525185736272,"score_gpt":0.2644142138513146,"score_spread":0.2516136886655783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051629697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997219,0.001204711,0.000049183367,0.00008045624,0.00042583127,0.00052142364,0.000016499025,0.000072760515,0.0004101183],"genre_scores_gemma":[0.99101925,0.0074731754,0.0000045069646,0.00018584139,0.00090659497,0.000019002382,0.00000706602,0.000030031995,0.00035454886],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997839,0.00019571403,0.0007007116,0.0003382948,0.00046844527,0.00045785742],"domain_scores_gemma":[0.9989101,0.000090454676,0.0001419536,0.00030289366,0.00008810536,0.00046646417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006183496,0.000288367,0.0003992332,0.00028993207,0.0004144644,0.00010483488,0.000102965816,0.000095324496,0.0004982919],"category_scores_gemma":[0.00015910529,0.00019932086,0.00017193847,0.0004370405,0.00010080534,0.00030056766,0.000043767795,0.0007702733,0.000038785565],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005189767,0.00027678368,0.9926307,0.00028913896,0.000035031346,0.00044353883,0.00016330548,0.00002252424,0.000056563462,0.0000013786592,0.0000986244,0.0054634367],"study_design_scores_gemma":[0.0013663963,0.00010037396,0.99596924,0.00010033617,0.00026217554,0.0018438788,0.000010708718,0.00007271498,0.0000042962906,0.000036300127,0.000017917162,0.00021564381],"about_ca_topic_score_codex":0.00015219403,"about_ca_topic_score_gemma":0.00036337157,"teacher_disagreement_score":0.0062684645,"about_ca_system_score_codex":0.00039309927,"about_ca_system_score_gemma":0.00039159498,"threshold_uncertainty_score":0.81280684},"labels":[],"label_agreement":null},{"id":"W2053076839","doi":"10.4021//jmc.v3i1.395","title":"Alternaria Alternata Infection in A Patient With Acute Promyelocytic Leukemia","year":2012,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Alternaria alternata; Acute promyelocytic leukemia; Alternaria; Leukemia; Dermatology; Immunology; Retinoic acid; Botany","score_opus":0.023265492762482524,"score_gpt":0.3180147629765294,"score_spread":0.2947492702140469,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053076839","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99750674,0.0006242636,0.00036766342,0.0008672696,0.00026207886,0.00012802136,0.0000015067142,0.000007110937,0.00023536565],"genre_scores_gemma":[0.9983635,0.00041754442,0.00023310175,0.00043061917,0.0004931216,0.0000028259433,0.0000016827272,0.000009769688,0.00004784283],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979437,0.00006595334,0.0004636034,0.000092260816,0.0011850604,0.00024941124],"domain_scores_gemma":[0.9989545,0.00012343466,0.00021486767,0.00013644891,0.000118096345,0.00045267263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000740878,0.000104504485,0.00033019227,0.00011739964,0.000024203471,0.000010180674,0.00007444065,0.00009825124,0.00031497166],"category_scores_gemma":[0.0008318389,0.000061996965,0.00008509446,0.0001460581,0.000083864994,0.00022267469,0.000028685405,0.0005329088,0.000009284584],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022438623,0.0005123493,0.9628696,0.000118573764,0.00013593952,0.017421877,0.0004206664,0.0000031824534,0.00034181096,0.00005171966,0.001579837,0.014300599],"study_design_scores_gemma":[0.005203687,0.0045500677,0.91820365,0.002086225,0.00036319208,0.060100686,0.00033341994,0.00022721682,0.00337644,0.000046349436,0.005308945,0.00020010247],"about_ca_topic_score_codex":0.0002335068,"about_ca_topic_score_gemma":0.00017981409,"teacher_disagreement_score":0.04466591,"about_ca_system_score_codex":0.00038056192,"about_ca_system_score_gemma":0.00068586925,"threshold_uncertainty_score":0.34487188},"labels":[],"label_agreement":null},{"id":"W2053909542","doi":"10.1371/journal.pone.0101510","title":"Epidemiology and Outcomes of Invasive Candidiasis Due to Non-albicans Species of Candida in 2,496 Patients: Data from the Prospective Antifungal Therapy (PATH) Registry 2004–2008","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":401,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Astellas Pharma; Thomas Jefferson University; University of Arkansas for Medical Sciences; Hamilton Health Sciences; University of Minnesota; Bunning Food Allergy Institute, Ann and Robert H. Lurie Children's Hospital of Chicago; University of Miami; University of Pennsylvania; Massachusetts General Hospital; University of Nebraska Medical Center; University of Washington; Emory University; Medical Center, University of Pittsburgh; City of Hope; University of Pittsburgh; Johns Hopkins University; University of Texas MD Anderson Cancer Center; Pfizer","keywords":"Corpus albicans; Epidemiology; Fluconazole; Candida albicans; Candida parapsilosis; Internal medicine; Microbiology; Candida krusei; Invasive candidiasis; Candida glabrata; Antifungal; Medicine; Biology","score_opus":0.07216208985470919,"score_gpt":0.29029633050080383,"score_spread":0.21813424064609466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053909542","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99593365,0.00055719656,0.00004918193,0.0012921508,0.000032247248,0.0008935209,0.00073270284,0.000008157689,0.0005011642],"genre_scores_gemma":[0.9976174,0.00048118515,0.00078056974,0.0006486229,0.00006769099,0.000021348347,0.0001432822,0.000015142417,0.00022474206],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982412,0.00016553658,0.0005648445,0.0004774757,0.00028868875,0.000262275],"domain_scores_gemma":[0.996515,0.0017410006,0.0002652513,0.0011461617,0.00022198775,0.00011062875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006761951,0.00017847242,0.0010744135,0.00006105291,0.000049058206,0.0000040126147,0.00030140585,0.000106161715,0.000101160455],"category_scores_gemma":[0.0062410305,0.00011481218,0.000054862787,0.00019635963,0.00038817726,0.00009248204,0.00014257831,0.00021888752,0.0000051904335],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006667473,0.0009801785,0.99015284,0.00009070511,0.00027227923,0.0000039720735,0.0010473534,3.125175e-7,0.0054706302,0.00003799321,0.0010993603,0.00017762356],"study_design_scores_gemma":[0.0015730142,0.0004769779,0.98768836,0.00035044015,0.0000968649,3.4166058e-7,0.00065427425,0.000019502397,0.00879774,0.00021153362,0.000024762703,0.00010615877],"about_ca_topic_score_codex":0.007884884,"about_ca_topic_score_gemma":0.011486409,"teacher_disagreement_score":0.005564836,"about_ca_system_score_codex":0.000065265536,"about_ca_system_score_gemma":0.00015250721,"threshold_uncertainty_score":0.9987217},"labels":[],"label_agreement":null},{"id":"W2054711186","doi":"10.1099/mic.0.25932-0","title":"Quantitative variation of biofilms among strains in natural populations of Candida albicans","year":2003,"lang":"en","type":"article","venue":"Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":300,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"McMaster University","keywords":"Biofilm; Candida albicans; Microbiology; Biology; Variation (astronomy); Bacteria; Genetics","score_opus":0.02651924695410709,"score_gpt":0.3038106726351824,"score_spread":0.27729142568107534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054711186","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99858594,0.00017885563,0.0001968027,0.00005251566,0.000085642474,0.0001679588,0.000055138033,0.0000045861243,0.0006725374],"genre_scores_gemma":[0.9974847,0.000007190455,0.0022064603,0.000027881926,0.0000038520952,0.0000020772045,0.00008308154,0.0000039600495,0.00018080875],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993663,0.00006968486,0.00028385545,0.00013274341,0.000026325915,0.000121104815],"domain_scores_gemma":[0.9996211,0.000047828238,0.00010558722,0.00012251754,0.0000839613,0.000019036299],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017046748,0.00006295955,0.00024975068,0.0000948448,0.00001459967,7.333083e-7,0.000031281706,0.00008586066,0.0001240277],"category_scores_gemma":[0.00024586724,0.000053018768,0.00005154027,0.00018514883,0.0001832625,0.00002654271,0.000005660203,0.00010109841,0.0000017873363],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004991488,0.00006458731,0.37539598,0.000023019777,0.000013792609,0.0000012919947,0.00036785426,0.000005015355,0.6171892,0.006842271,0.0000185766,0.000028468798],"study_design_scores_gemma":[0.00054678327,0.00018411424,0.9801939,0.00003558407,0.000019617593,0.0000042234806,0.00043993082,0.000029484345,0.018284691,0.00017940969,0.000034651814,0.000047611084],"about_ca_topic_score_codex":0.0008733389,"about_ca_topic_score_gemma":0.0059571792,"teacher_disagreement_score":0.6047979,"about_ca_system_score_codex":0.000039051556,"about_ca_system_score_gemma":0.00008782145,"threshold_uncertainty_score":0.33242458},"labels":[],"label_agreement":null},{"id":"W2054729867","doi":"10.1038/sj.bmt.1704793","title":"What is the clinical significance of positive blood cultures with Aspergillus sp in hematopoietic stem cell transplant recipients? A 23 year experience","year":2004,"lang":"en","type":"article","venue":"Bone Marrow Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Aspergillosis; Medicine; Clinical significance; Aspergillus; Hematopoietic stem cell transplantation; Transplantation; Blood culture; Hematopoietic stem cell; Population; Stem cell; Haematopoiesis; Immunology; Internal medicine; Pathology; Biology; Microbiology","score_opus":0.01718482954981211,"score_gpt":0.2875874268098622,"score_spread":0.2704025972600501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054729867","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970143,0.000582722,0.0006166804,0.0005569424,0.00008471057,0.0007018454,0.000056150082,0.000018986644,0.0003676533],"genre_scores_gemma":[0.99600136,0.0030823853,0.00034222775,0.00023072616,0.000024039582,0.000036457463,0.000045949677,0.00001527282,0.00022157565],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99833214,0.00010114844,0.0005379617,0.00038420808,0.00042253867,0.00022197585],"domain_scores_gemma":[0.9992957,0.00013485474,0.00013176315,0.0002700546,0.00008602073,0.00008160128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003020799,0.00017324407,0.00036287933,0.000049867253,0.000060408507,0.00002222948,0.00010168047,0.00011326098,0.000025603511],"category_scores_gemma":[0.000004677627,0.00011119707,0.00012181974,0.00025730184,0.00025626415,0.00022020473,0.0000034258392,0.00023630449,0.000009156326],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01873842,0.002959001,0.609014,0.0018723214,0.00019935644,0.0015102791,0.2226192,0.00021565409,0.1402211,0.001028323,0.00003813443,0.0015842058],"study_design_scores_gemma":[0.0085772425,0.0013011433,0.66622794,0.003269226,0.00052865216,0.00019575328,0.016751925,0.000014573741,0.30262956,0.00014978355,0.000020259697,0.00033394762],"about_ca_topic_score_codex":0.00010825489,"about_ca_topic_score_gemma":0.0003973146,"teacher_disagreement_score":0.20586728,"about_ca_system_score_codex":0.00003924982,"about_ca_system_score_gemma":0.00012361145,"threshold_uncertainty_score":0.45344847},"labels":[],"label_agreement":null},{"id":"W2055582303","doi":"10.1016/s0733-8635(03)00024-x","title":"New antifungal agents","year":2003,"lang":"en","type":"review","venue":"Dermatologic Clinics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":106,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mediprobe Research (Canada); Sunnybrook Health Science Centre","funders":"","keywords":"Posaconazole; Voriconazole; Caspofungin; Echinocandins; Medicine; Echinocandin; Azole; Pharmacology; Fluconazole; Antifungal; Dermatology","score_opus":0.1646506991810453,"score_gpt":0.4493521959835744,"score_spread":0.2847014968025291,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055582303","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000026926175,0.9843383,0.00022229305,0.00006740067,0.00087393844,0.00096952193,0.000032532324,0.00013214859,0.01333693],"genre_scores_gemma":[0.000013475953,0.98438007,0.0019226576,0.0013261068,0.00017226634,0.000016552196,0.00023744846,0.00006161525,0.011869795],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965367,0.000266275,0.0014768277,0.00078462594,0.0004000788,0.0005355111],"domain_scores_gemma":[0.9973904,0.00042791828,0.0005472541,0.001125998,0.00009346883,0.00041499798],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00043198766,0.00058790337,0.0036039092,0.00013302814,0.000098585755,0.00003644501,0.00030368185,0.0011027855,0.0012051564],"category_scores_gemma":[0.00073700125,0.00042227202,0.001470561,0.00040590813,0.00010899147,0.000049256403,0.00008814204,0.0010755333,0.0018523583],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017973653,0.00014585532,0.0035081424,0.0136753805,0.00021986407,0.0007118569,0.000008824354,1.6688086e-8,1.6743664e-8,0.00026859596,0.16511469,0.81632876],"study_design_scores_gemma":[0.0004371756,0.00007200884,0.00019368883,0.0048592663,0.0015208406,0.00075740606,0.000012958675,0.000002316698,1.9880869e-7,0.00014778176,0.99163085,0.00036548753],"about_ca_topic_score_codex":0.0000029569558,"about_ca_topic_score_gemma":0.000003084507,"teacher_disagreement_score":0.82651615,"about_ca_system_score_codex":0.00010834034,"about_ca_system_score_gemma":0.0014343505,"threshold_uncertainty_score":0.9998229},"labels":[],"label_agreement":null},{"id":"W2058147875","doi":"10.1086/527037","title":"Reply to Eiland et al","year":2008,"lang":"fr","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Hamilton Health Sciences","funders":"","keywords":"Medicine","score_opus":0.06391822433635973,"score_gpt":0.41040641505796693,"score_spread":0.3464881907216072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058147875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92339665,0.018304627,0.00057465915,0.039958447,0.0054169153,0.0006692654,0.00020303039,0.00025196612,0.011224467],"genre_scores_gemma":[0.80944955,0.009082105,0.000033446733,0.16406412,0.0014026681,0.000023115179,0.000036013465,0.00003869724,0.015870254],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99654275,0.00052394223,0.0010135275,0.0008585984,0.00040698776,0.00065421924],"domain_scores_gemma":[0.9954704,0.0016966541,0.0001435731,0.00086918334,0.00027544034,0.0015447291],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00080224033,0.00030886199,0.0008363678,0.00007391179,0.0002534141,0.00003373364,0.00013887246,0.00019637999,0.0016948895],"category_scores_gemma":[0.009744571,0.0002856743,0.00068288535,0.00035778605,0.0008998574,0.00016333374,0.00012672524,0.0006266655,0.0034201439],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024215798,0.0018563834,0.59117675,0.00007238102,0.000101678845,0.00045670688,0.000046268306,0.000008336981,0.000007475844,0.00023827661,0.39943457,0.0063590175],"study_design_scores_gemma":[0.0010784672,0.0011731125,0.5934127,0.0002354663,0.00017800191,0.000028284572,0.0000265821,0.000024088033,0.0000058527085,0.00023180278,0.40341473,0.00019088932],"about_ca_topic_score_codex":0.00026057273,"about_ca_topic_score_gemma":0.00013876152,"teacher_disagreement_score":0.12410567,"about_ca_system_score_codex":0.00015088131,"about_ca_system_score_gemma":0.00084520195,"threshold_uncertainty_score":0.9999595},"labels":[],"label_agreement":null},{"id":"W2058438508","doi":"10.1186/cc13542","title":"Candida in the respiratory tract secretions of critically ill patients and the impact of antifungal treatment: a randomized placebocontrolled pilot trial (CANTREAT study)","year":2014,"lang":"en","type":"article","venue":"Critical Care","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Toronto General Hospital; Centre hospitalier universitaire de Québec; Kingston General Hospital; Hôpital du Sacré-Cœur de Montréal","funders":"","keywords":"Medicine; Observational study; Critically ill; Intensive care medicine; Pneumonia; Antifungal; Randomized controlled trial; Ventilator-associated pneumonia; Clinical trial; Respiratory tract; Internal medicine; Respiratory system; Dermatology","score_opus":0.024348536327387087,"score_gpt":0.3483842470872083,"score_spread":0.3240357107598212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058438508","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924529,0.00052406994,0.000037866583,0.00041371502,0.0000498353,0.00406772,0.00009841358,0.000009119792,0.002346358],"genre_scores_gemma":[0.99940246,0.000014129696,0.000011103616,0.00026433743,0.000074391355,0.00019664766,0.000013173663,0.0000124126045,0.000011328137],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99643606,0.001940843,0.000690119,0.0002725588,0.00039211064,0.000268332],"domain_scores_gemma":[0.9917812,0.006610605,0.00007118561,0.00042721306,0.000989425,0.000120407036],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0014982001,0.00020923559,0.0012889664,0.000078135956,0.0001094937,0.000023044018,0.000109697234,0.000076489254,0.00006397344],"category_scores_gemma":[0.020352561,0.00009198054,0.00043438113,0.00014819216,0.0012415568,0.00005125257,0.000019769057,0.00020250845,9.805082e-7],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.8180275,0.003138851,0.17260541,0.00013997559,0.00012964643,0.000014357095,0.003165857,9.17119e-7,0.00018053479,0.0021284726,0.00003674252,0.00043174205],"study_design_scores_gemma":[0.75761443,0.0107573485,0.22520742,0.00007380964,0.00079458335,0.0000017301855,0.0049376646,0.0001139158,0.000042909847,0.0003577725,0.000005301725,0.000093121846],"about_ca_topic_score_codex":0.00092316687,"about_ca_topic_score_gemma":0.00034382215,"teacher_disagreement_score":0.06041307,"about_ca_system_score_codex":0.00009167181,"about_ca_system_score_gemma":0.00019959184,"threshold_uncertainty_score":0.9878994},"labels":[],"label_agreement":null},{"id":"W2059308047","doi":"10.1097/mph.0b013e3181cb49a8","title":"Successful Treatment of Life-threatening Candida Peritonitis in a Child With Abdominal Non-Hodgkin Lymphoma Using Efungumab and Amphotericin B Colloid Dispersion","year":2010,"lang":"en","type":"article","venue":"Journal of Pediatric Hematology/Oncology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Medicine; Peritonitis; Lymphoma; Amphotericin B; Chemotherapy; Fluconazole; Lymphoblastic lymphoma; Internal medicine; Surgery; Gastroenterology; Antifungal; Immunology; Dermatology; Immune system","score_opus":0.011396601925214007,"score_gpt":0.2934208587855069,"score_spread":0.28202425686029287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059308047","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965331,0.002055494,0.0001433832,0.00042188837,0.00026865912,0.00032764534,0.000008184651,0.0000060935163,0.00023554103],"genre_scores_gemma":[0.9934341,0.0014566461,0.004611114,0.000051399853,0.0004013463,0.0000047997596,0.000002301549,0.000022514916,0.000015785055],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979335,0.00013506647,0.0009776857,0.00029192097,0.00027027802,0.00039153226],"domain_scores_gemma":[0.99808127,0.00031996885,0.0008197627,0.00020159203,0.00025793634,0.00031946375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045762464,0.0002609012,0.0015096971,0.00050058,0.00010645146,0.000011183656,0.000107418346,0.0003653845,0.00006201057],"category_scores_gemma":[0.00019898443,0.00018238458,0.00015706905,0.00040219727,0.0003131072,0.0001315854,0.000034628858,0.0003600291,0.000001291687],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006285514,0.001089098,0.9700125,0.0002001837,0.00011747464,0.0032762813,0.0014530808,0.0000050472922,0.012622197,0.00001274156,0.000030188281,0.0048956815],"study_design_scores_gemma":[0.03108081,0.017187104,0.8912494,0.0002815539,0.0015132531,0.04484509,0.0062704715,0.0007955521,0.0057742367,0.000034418987,0.00052524987,0.00044285407],"about_ca_topic_score_codex":0.00056013704,"about_ca_topic_score_gemma":0.0013028873,"teacher_disagreement_score":0.078763105,"about_ca_system_score_codex":0.0004188242,"about_ca_system_score_gemma":0.0016343025,"threshold_uncertainty_score":0.7437427},"labels":[],"label_agreement":null},{"id":"W2059352595","doi":"10.1016/j.ygeno.2013.06.002","title":"Genome-wide transcriptional profiling and enrichment mapping reveal divergent and conserved roles of Sko1 in the Candida albicans osmotic stress response","year":2013,"lang":"en","type":"article","venue":"Genomics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Professional Staff Congress and City University of New York; National Institute of General Medical Sciences; U.S. Department of Education; Canadian Institutes of Health Research; John Jay College of Criminal Justice; National Institutes of Health","keywords":"Biology; Candida albicans; Complementation; Gene; Osmotic shock; Saccharomyces cerevisiae; In silico; Genetics; Transcription factor; Mutant; Gene expression profiling; Gene expression","score_opus":0.01950690965249032,"score_gpt":0.23654167792704045,"score_spread":0.21703476827455012,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059352595","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961144,0.0017179832,0.0001073539,0.001257161,0.000024079962,0.0006566331,0.000041422525,0.0000055766504,0.00007544547],"genre_scores_gemma":[0.9984865,0.00035241456,0.00064666674,0.00029764947,0.000022032307,0.000022856593,0.000018167915,0.0000073755923,0.00014629787],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99900544,0.00013315008,0.00030301377,0.00021252275,0.00015618559,0.00018971536],"domain_scores_gemma":[0.99941415,0.00020749496,0.00006260837,0.00018369927,0.000056201643,0.00007584875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005908427,0.00010842115,0.00022784443,0.00006183919,0.0000707242,0.00001762125,0.000069227266,0.00005080198,0.000036603997],"category_scores_gemma":[0.00009399288,0.0000803662,0.00003980062,0.00007435144,0.00015111259,0.00004255833,0.000029500412,0.00012976944,0.0000017296734],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056646485,0.00007420661,0.7943949,0.00018084868,0.00003330618,0.000010169284,0.0042376947,0.00001434908,0.20006025,0.000066449495,0.0000171788,0.0003441425],"study_design_scores_gemma":[0.0007543454,0.00010590627,0.99132043,0.000060095743,0.000032064618,0.000007559243,0.006004096,0.00012456853,0.0011073725,0.00017658531,0.00023009215,0.00007690192],"about_ca_topic_score_codex":0.00023619363,"about_ca_topic_score_gemma":0.00033876896,"teacher_disagreement_score":0.19895288,"about_ca_system_score_codex":0.00009049881,"about_ca_system_score_gemma":0.00012212191,"threshold_uncertainty_score":0.32772383},"labels":[],"label_agreement":null},{"id":"W2060022937","doi":"10.1016/j.bbmt.2004.12.172","title":"Elimination of alloreactive T lymphocytes using photodynamic therapy prevents the development of GVHD and promotes B and T cell reconstitution after MHC-mismatched transplantation","year":2005,"lang":"en","type":"article","venue":"Biology of Blood and Marrow Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Medicine; Immunology; Photodynamic therapy; Transplantation; T cell; Major histocompatibility complex; Cancer research; Immune system; Internal medicine","score_opus":0.01443789910155951,"score_gpt":0.25998348418857353,"score_spread":0.24554558508701402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060022937","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970003,0.001368116,0.0010993063,0.0000354714,0.000014894393,0.00038362673,0.00003660894,0.000004608014,0.000057102374],"genre_scores_gemma":[0.9927969,0.003903991,0.0031879402,0.0000108883605,0.0000071472446,0.000010576571,0.000074109004,0.000003933749,0.0000045069346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993609,0.00005567443,0.0002946561,0.00014895927,0.00006638894,0.00007338725],"domain_scores_gemma":[0.9996472,0.0000735578,0.0001485708,0.000050487793,0.000058349633,0.000021824442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021886786,0.000090761496,0.00019160652,0.00006104652,0.000042757147,0.000002054354,0.000018743205,0.000088635825,0.000006068929],"category_scores_gemma":[0.000005299308,0.00006499777,0.00002396841,0.00004395876,0.00022371736,0.00008321491,0.000002295975,0.00003823787,4.6003308e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013671275,0.000128002,0.052915167,0.0007073793,0.00006299684,6.7916426e-7,0.005766458,0.0000012977321,0.9208392,0.000028076425,4.43077e-8,0.018183568],"study_design_scores_gemma":[0.0016808154,0.00017143907,0.3188341,0.000118285236,0.00022203427,0.000019513087,0.00022333754,0.000091796566,0.67853713,0.000051482537,0.0000016118955,0.000048455517],"about_ca_topic_score_codex":0.000033020344,"about_ca_topic_score_gemma":0.00010403566,"teacher_disagreement_score":0.2659189,"about_ca_system_score_codex":0.000009877135,"about_ca_system_score_gemma":0.00007485947,"threshold_uncertainty_score":0.26505318},"labels":[],"label_agreement":null},{"id":"W2060322845","doi":"10.1371/journal.pgen.0010001","title":"A Human-Curated Annotation of the Candida albicansGenome","year":2005,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":338,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Royal Victoria Hospital; National Research Council Canada; Université de Montréal; Montreal Clinical Research Institute; Biotechnology Research Institute","funders":"National Institute of Dental and Craniofacial Research; National Research Council Canada; Canadian Institutes of Health Research; National Institutes of Health; Incyte; North Carolina State University; Massachusetts Institute of Technology; National Institute of Allergy and Infectious Diseases; Broad Institute; Wellcome Trust; University of California, San Francisco; Burroughs Wellcome Fund","keywords":"Biology; Candida albicans; Genome; Gene; Genetics; Gene prediction; Genome project; Computational biology; Comparative genomics; Open reading frame; Whole genome sequencing; Fungal protein; Genomics; Peptide sequence","score_opus":0.029565682062038103,"score_gpt":0.29212547025623814,"score_spread":0.26255978819420006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060322845","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963987,0.0003987024,0.000018624378,0.00054820976,0.000021678252,0.00021477057,0.000010528908,0.00001265903,0.0023761662],"genre_scores_gemma":[0.99825215,0.000024582694,0.00021452049,0.00024133785,0.000084613486,0.0000036874928,0.0000063762313,0.000008769592,0.0011639493],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993578,0.00002340392,0.0001905555,0.00011010412,0.00020649795,0.00011161701],"domain_scores_gemma":[0.9994613,0.000012568429,0.00006323537,0.0002866695,0.00013342066,0.000042783977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000054599233,0.00006323891,0.00012763102,0.000019767298,0.000053403804,0.000003823657,0.00007063635,0.000043515436,0.000115637115],"category_scores_gemma":[0.000042122432,0.000043135697,0.000052269683,0.00013893675,0.00009426829,0.000014288756,0.000017592112,0.000080101265,0.00001340445],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042936288,0.00023291411,0.2255336,0.00008789335,0.00005072258,0.0000013196783,0.0006248051,0.00006915233,0.77159905,0.00017228545,0.00048769786,0.0010976213],"study_design_scores_gemma":[0.0006421578,0.00016816548,0.5981681,0.00006494701,0.00013279718,0.00000225546,0.000157091,0.0013691493,0.39698362,0.00014915263,0.0020710377,0.0000915247],"about_ca_topic_score_codex":0.000010037903,"about_ca_topic_score_gemma":0.00024340647,"teacher_disagreement_score":0.37461543,"about_ca_system_score_codex":0.000041563442,"about_ca_system_score_gemma":0.00008099596,"threshold_uncertainty_score":0.17590228},"labels":[],"label_agreement":null},{"id":"W2060866025","doi":"10.5863/1551-6776-11.2.108","title":"Evaluation of Conformity of a First Prescription of Lipid-Based Formulation of Amphotericin B in a University-Teaching Pediatric Hospital","year":2006,"lang":"en","type":"article","venue":"The Journal of Pediatric Pharmacology and Therapeutics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Conformity; Amphotericin B; Medical prescription; Teaching hospital; Medicine; Pediatrics; Psychology; Family medicine; Pharmacology; Antifungal; Dermatology; Social psychology","score_opus":0.025461200562197913,"score_gpt":0.3059543977873121,"score_spread":0.2804931972251142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060866025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973527,0.0013667494,0.0007241677,0.0000960428,0.00010870066,0.00026205071,0.000008510538,0.0000015434745,0.000079496946],"genre_scores_gemma":[0.9983927,0.0013216889,0.00010863183,0.000014360982,0.00015074591,2.240856e-7,0.000001898257,0.0000038034655,0.0000059470494],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99861795,0.00031833368,0.00055919803,0.000054924338,0.0003612585,0.00008835494],"domain_scores_gemma":[0.9980458,0.00030248248,0.0009826238,0.00007322039,0.0005744326,0.000021468446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026964773,0.00007417575,0.00030682908,0.00025108707,0.000032930533,7.4250363e-7,0.000078722565,0.00008094243,0.000016978169],"category_scores_gemma":[0.000054857835,0.00005553374,0.00008309012,0.00023642044,0.00008699834,0.00009963538,0.000013193341,0.00020556062,5.01805e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026774877,0.0008092009,0.96121633,0.00037649414,0.00008831966,0.0000015342899,0.0009642852,0.0012363106,0.03170539,0.000048107264,0.000044822667,0.0008316991],"study_design_scores_gemma":[0.0062082247,0.0012956328,0.9691742,0.000027291677,0.0039258823,0.0000043445875,0.00037108816,0.009056299,0.009549183,0.00029889247,0.000028531924,0.00006041767],"about_ca_topic_score_codex":0.00008628346,"about_ca_topic_score_gemma":0.000029713756,"teacher_disagreement_score":0.022156207,"about_ca_system_score_codex":0.00006540279,"about_ca_system_score_gemma":0.00026638407,"threshold_uncertainty_score":0.22646002},"labels":[],"label_agreement":null},{"id":"W2061205266","doi":"10.1186/s12866-014-0305-4","title":"Saccharomyces cerevisiae biofilm tolerance towards systemic antifungals depends on growth phase","year":2014,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Danmarks Tekniske Universitet; University of Toronto","keywords":"Biology; Biofilm; Saccharomyces cerevisiae; Microbiology; Parasitology; Yeast; Zoology; Bacteria; Genetics","score_opus":0.022589086020498583,"score_gpt":0.29805068955502756,"score_spread":0.275461603534529,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061205266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99222594,0.0014359681,0.0013267128,0.00029929323,0.0004397113,0.00049469044,0.000104046165,0.00014008148,0.0035335687],"genre_scores_gemma":[0.996233,0.0001544985,0.0007402238,0.0011591009,0.00035301576,0.000019701427,0.00014040689,0.000032616783,0.0011674385],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977463,0.00032076938,0.00054552103,0.00073571334,0.000105811596,0.00054589345],"domain_scores_gemma":[0.9985976,0.0002145137,0.00017993076,0.0006709736,0.00017273871,0.00016420176],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00060573383,0.00032776297,0.0008425804,0.0001375078,0.00011847494,0.00002158126,0.00024701236,0.00034188543,0.000392376],"category_scores_gemma":[0.0004475096,0.00025185503,0.0002489429,0.00019947578,0.00020150938,0.0000605503,0.0000544599,0.0003281591,0.00061378407],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010322041,0.00032602527,0.06769018,0.00064687507,0.000049112197,0.000018348084,0.00007759209,0.0000010708959,0.9226312,0.0011019298,0.003492192,0.0029332594],"study_design_scores_gemma":[0.020373555,0.0066792364,0.13065131,0.0024353075,0.00047366958,0.001894057,0.00051212887,0.0002954951,0.79271847,0.00032514555,0.04186297,0.0017786847],"about_ca_topic_score_codex":0.000037556696,"about_ca_topic_score_gemma":0.000038161692,"teacher_disagreement_score":0.12991276,"about_ca_system_score_codex":0.0000910326,"about_ca_system_score_gemma":0.00015878244,"threshold_uncertainty_score":0.9999934},"labels":[],"label_agreement":null},{"id":"W2061241467","doi":"10.1055/s-2005-836502","title":"New Antifungal Drugs and the Pediatric Cancer Patient: Current Status of Clinical Development","year":2005,"lang":"en","type":"review","venue":"Klinische Pädiatrie","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Anidulafungin; Caspofungin; Micafungin; Posaconazole; Voriconazole; Medicine; Echinocandin; Intensive care medicine; Antifungal; Fluconazole; Dermatology","score_opus":0.09238259159073145,"score_gpt":0.4432996693395572,"score_spread":0.35091707774882575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061241467","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0018488998,0.99448156,0.00003872049,0.00009678602,0.000983742,0.0017486854,0.00010994928,0.000037619844,0.000654026],"genre_scores_gemma":[0.0010914949,0.9940884,0.0013565402,0.000071415474,0.0024870478,0.00007116658,0.00008837412,0.00006509099,0.00068044546],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9941027,0.00047679813,0.0030654059,0.0008421217,0.0008079218,0.0007050158],"domain_scores_gemma":[0.9957335,0.0011741689,0.0014408181,0.00076533796,0.00022142593,0.0006647794],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016180151,0.0006172769,0.003720601,0.00016882605,0.00013457269,0.00003144336,0.0002666409,0.00049795664,0.00027040634],"category_scores_gemma":[0.0009653957,0.00035565413,0.0011056561,0.00051093806,0.00026396578,0.0000724284,0.00026043813,0.001467681,0.000075317854],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032147637,0.00017432016,0.0307011,0.009584397,0.0002305534,0.0000045656757,0.00029232466,9.072445e-8,8.9508525e-9,0.000082172606,0.0049704197,0.95363855],"study_design_scores_gemma":[0.002460628,0.000093791146,0.0037520763,0.002311426,0.003814268,0.0000047019244,0.000047436028,0.0000016717285,6.3299086e-7,0.0000101646365,0.98715854,0.00034465163],"about_ca_topic_score_codex":0.000076952754,"about_ca_topic_score_gemma":0.000027495827,"teacher_disagreement_score":0.9821881,"about_ca_system_score_codex":0.000102602615,"about_ca_system_score_gemma":0.009303616,"threshold_uncertainty_score":0.99988955},"labels":[],"label_agreement":null},{"id":"W2061603911","doi":"10.1128/aac.46.9.3096-3100.2002","title":"Effect of the Echinocandin Caspofungin on Expression of <i>Candida albicans</i> Secretory Aspartyl Proteinases and Phospholipase In Vitro","year":2002,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal","funders":"","keywords":"Caspofungin; Echinocandins; Echinocandin; Candida albicans; Microbiology; Corpus albicans; Biology; Miconazole; In vitro; Phospholipase; Virulence; Fungal protein; Fungicide; Enzyme; Biochemistry; Gene; Antifungal; Amphotericin B; Saccharomyces cerevisiae; Fluconazole","score_opus":0.00807707434882508,"score_gpt":0.23893446475036914,"score_spread":0.23085739040154407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061603911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984092,0.00022766681,0.000002397092,0.00037134075,0.000035645007,0.00060038705,0.000031348663,0.0000069147677,0.00031510612],"genre_scores_gemma":[0.9976149,0.0007964155,0.00003101299,0.0011050832,0.000021736552,0.00000590868,0.000004330347,0.000014626334,0.00040596767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916184,0.00006012393,0.00023112346,0.00023477578,0.00014620188,0.00016594601],"domain_scores_gemma":[0.99951875,0.00006387455,0.00010601701,0.00023532535,0.000019032947,0.000057009805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001750982,0.00015836758,0.00037558604,0.00004588936,0.00005091815,0.000006351972,0.00006288186,0.00008191081,0.00014109635],"category_scores_gemma":[0.000022872897,0.00009595083,0.00008368541,0.00011653183,0.00018776668,0.00003633552,0.000023613178,0.00013642179,6.8651343e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027980679,0.0002761011,0.1443147,0.00038866358,0.000020191703,0.000010490543,0.00047130245,4.7418757e-7,0.8374406,0.000003272456,0.002586254,0.011689854],"study_design_scores_gemma":[0.0028643117,0.0004853453,0.06429622,0.00047902344,0.000022840137,0.000006740684,0.00002152739,0.000044049655,0.93062395,0.000004062606,0.001066704,0.00008522051],"about_ca_topic_score_codex":0.00014184193,"about_ca_topic_score_gemma":0.000015875994,"teacher_disagreement_score":0.09318333,"about_ca_system_score_codex":0.000019534764,"about_ca_system_score_gemma":0.00001381891,"threshold_uncertainty_score":0.39127612},"labels":[],"label_agreement":null},{"id":"W2061949512","doi":"10.1038/msb.2009.95","title":"Chemogenomic profiling predicts antifungal synergies","year":2009,"lang":"en","type":"article","venue":"Molecular Systems Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Biotechnology Research Institute; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Profiling (computer programming); Computational biology; Antifungal; Bioinformatics; Microbiology; Computer science","score_opus":0.01255697351729213,"score_gpt":0.27505729457500755,"score_spread":0.2625003210577154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061949512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9830231,0.0044218474,0.0039778724,0.00029679327,0.0003230712,0.0005627551,0.000012976196,0.0001420684,0.0072394894],"genre_scores_gemma":[0.99835104,0.000041164272,0.000381388,0.00037370462,0.00018399181,0.000013592529,0.000070760914,0.000015343003,0.0005689966],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985847,0.000105532155,0.00035887797,0.0004335591,0.00013194967,0.00038541574],"domain_scores_gemma":[0.99919665,0.000021808346,0.00008623687,0.0004668532,0.00010803203,0.00012043464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029430128,0.00018741234,0.00046656668,0.00008442945,0.00006489301,0.00001795275,0.00011594964,0.00022964014,0.000016932225],"category_scores_gemma":[0.00014566621,0.00015184644,0.00013832393,0.00013719777,0.00009937448,0.000031652195,0.000025003765,0.00017918405,0.00006255977],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013764127,0.000071609225,0.048353016,0.00010762862,0.000058336307,0.0001542338,0.000028234736,0.000012200114,0.9443254,0.0055215103,0.00023746614,0.0009927638],"study_design_scores_gemma":[0.004294169,0.0035684588,0.24959336,0.00062370254,0.00036797696,0.0008291394,0.00057474483,0.0028925154,0.72274476,0.0010461678,0.012340726,0.0011242492],"about_ca_topic_score_codex":0.000024514107,"about_ca_topic_score_gemma":0.0000013361639,"teacher_disagreement_score":0.22158056,"about_ca_system_score_codex":0.00007246859,"about_ca_system_score_gemma":0.00010968876,"threshold_uncertainty_score":0.61921185},"labels":[],"label_agreement":null},{"id":"W2062254813","doi":"10.1016/j.healun.2009.11.591","title":"573: Is Targeted Antifungal Prophylaxis Effective in Lung Transplants?","year":2010,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Antifungal; Medicine; Aspergillosis; Lung; Aspergillus; Intensive care medicine; Lung transplantation; Incidence (geometry); Internal medicine; Immunology; Microbiology; Biology; Dermatology","score_opus":0.0052790658961699285,"score_gpt":0.2691356698538627,"score_spread":0.2638566039576928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062254813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99722815,0.00081452524,0.00048950716,0.0007326074,0.00017817372,0.00040394525,0.00001644546,0.000007804323,0.00012885152],"genre_scores_gemma":[0.99853957,0.0008519903,0.00025873524,0.00017614053,0.000106103565,0.0000022682532,0.0000065304257,0.000010102582,0.000048552985],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989646,0.00012564602,0.00035421492,0.00011087037,0.0002717577,0.00017287856],"domain_scores_gemma":[0.99939704,0.00021297757,0.000089188376,0.00011049504,0.00010450443,0.00008577635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009812539,0.000119587334,0.00028734803,0.00012901466,0.000093905874,0.000014047049,0.00005914165,0.000103790895,0.00007837393],"category_scores_gemma":[0.000027129994,0.000073784715,0.00008875851,0.00016633168,0.00010135962,0.0001786856,0.0000022216147,0.00067943434,0.0000023083096],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0041745766,0.00009957947,0.52699924,0.000589492,0.00005847516,0.00006924284,0.004630662,0.0000033946046,0.46227264,0.00002178374,0.00020441624,0.000876524],"study_design_scores_gemma":[0.0018550272,0.0004431607,0.9520737,0.00027512517,0.0002684643,0.00070384174,0.00016889966,0.00031094337,0.043683533,0.000059737402,0.000072823306,0.00008474986],"about_ca_topic_score_codex":0.000048992206,"about_ca_topic_score_gemma":0.00020911096,"teacher_disagreement_score":0.4250745,"about_ca_system_score_codex":0.000019647521,"about_ca_system_score_gemma":0.00007248158,"threshold_uncertainty_score":0.30088535},"labels":[],"label_agreement":null},{"id":"W2062396527","doi":"10.1371/journal.ppat.0030184","title":"Self-Regulation of Candida albicans Population Size during GI Colonization","year":2007,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":183,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Candida albicans; Biology; Colonization; Microbiology; Corpus albicans; Gene; Virulence; Commensalism; Gene expression; Pathogen; Population; Mutant; Virulence factor; Bacteria; Genetics","score_opus":0.010149928565681691,"score_gpt":0.24888322670452107,"score_spread":0.23873329813883937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062396527","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99779433,0.000045074165,0.0006936961,0.00007416201,0.000047771537,0.00035302545,0.000012530856,0.000076108576,0.00090331456],"genre_scores_gemma":[0.99578685,0.000015564518,0.0033944699,0.000032282536,0.000101619364,0.0000032496391,0.00006533446,0.000016230646,0.0005843923],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989715,0.000018802739,0.00032938982,0.00019575711,0.0003017699,0.0001827606],"domain_scores_gemma":[0.9993178,0.00006304232,0.000126989,0.00022395802,0.00018536931,0.000082846185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023014795,0.00009258011,0.00020540116,0.0000635525,0.00007673534,0.000004517825,0.00003207564,0.000094915165,0.0001343918],"category_scores_gemma":[0.0003005153,0.000088135894,0.00006497795,0.00023440909,0.00002624162,0.00006983985,0.000011865276,0.000071352835,0.0000071011323],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012248299,0.00013418167,0.63878095,0.0001675005,0.00002428752,0.000006482236,0.00024678023,0.000008166832,0.36022443,0.00012732681,0.000004404757,0.00015298704],"study_design_scores_gemma":[0.0004902097,0.00007780211,0.9514346,0.00006050474,0.00010987227,0.000004023239,0.000085755935,0.00032883458,0.04724046,0.000059207745,0.000033748413,0.000074945194],"about_ca_topic_score_codex":0.000052752395,"about_ca_topic_score_gemma":0.00033354168,"teacher_disagreement_score":0.31298396,"about_ca_system_score_codex":0.00015661877,"about_ca_system_score_gemma":0.000043877964,"threshold_uncertainty_score":0.35940775},"labels":[],"label_agreement":null},{"id":"W2062577275","doi":"10.4021//jmc.v4i6.1237","title":"Treatment of Candida Glabrata With Micafungin: A Case Report and Brief Review of the Literature","year":2013,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Caspofungin; Micafungin; Candida glabrata; Medicine; Fluconazole; Candida tropicalis; Bloodstream infection; Central venous catheter; Echinocandin; Surgery; Intensive care medicine; Catheter; Antifungal; Dermatology","score_opus":0.016084011820903268,"score_gpt":0.30249786491689834,"score_spread":0.2864138530959951,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062577275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9039494,0.08809247,0.0000059096483,0.007583569,0.00004453711,0.00021810569,0.0000111075915,0.00000143091,0.00009348641],"genre_scores_gemma":[0.97666204,0.022316074,0.0001549682,0.000515349,0.00010837594,0.0000022132285,0.0000022997294,0.000005303119,0.00023335965],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99842894,0.000051838575,0.00058724085,0.00009628252,0.0007401364,0.00009556375],"domain_scores_gemma":[0.9984219,0.00020234732,0.00043820514,0.00027394271,0.00042675712,0.00023684758],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038317702,0.000095634525,0.00052884314,0.000029759305,0.000024932207,0.000006487899,0.000062096755,0.00007062691,0.00032587186],"category_scores_gemma":[0.0015707815,0.00003912422,0.00013906624,0.00015662314,0.00022373501,0.000060703966,0.0000174182,0.00017172006,2.404779e-7],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010535924,0.0012881791,0.3259067,0.013877284,0.00053643313,0.6020755,0.00086815277,7.938472e-8,0.0009335728,0.00007164088,0.026239326,0.027149558],"study_design_scores_gemma":[0.0020965426,0.002916776,0.042272408,0.028404362,0.00058036926,0.9158097,0.00042398213,0.000005491024,0.0015098476,0.000018766968,0.005887436,0.000074297444],"about_ca_topic_score_codex":0.0002966826,"about_ca_topic_score_gemma":0.00009493642,"teacher_disagreement_score":0.31373423,"about_ca_system_score_codex":0.00003443579,"about_ca_system_score_gemma":0.0004840614,"threshold_uncertainty_score":0.35680684},"labels":[],"label_agreement":null},{"id":"W2063028960","doi":"10.1038/sj.gene.6364254","title":"Genetic control of suceptibility to Candida albicans in susceptible A/J and resistant C57BL/6J mice","year":2005,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute; William Osler Health System","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; McGill University; Genomic Health","keywords":"Biology; Candida albicans; Congenic; Corpus albicans; Population; Inbred strain; Gene; Microbiology; Immunology; Genetics","score_opus":0.011078710197437064,"score_gpt":0.2612125439745248,"score_spread":0.25013383377708776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063028960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933907,0.0046551246,0.00020796683,0.00068763294,0.000025509704,0.00047269205,0.000043585074,0.000013716674,0.000503106],"genre_scores_gemma":[0.99747103,0.00082328817,0.0009241067,0.00034591585,0.00004674209,0.000010078051,0.0000052856453,0.000011829585,0.0003617049],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986771,0.00012674731,0.0004180874,0.0003107015,0.0001691785,0.00029823268],"domain_scores_gemma":[0.99906,0.000110645284,0.0000651435,0.00045263415,0.00011713336,0.00019449719],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052744534,0.00016483484,0.00047181596,0.0000961753,0.000096477655,0.000013857327,0.00008592587,0.00009263584,0.00013322257],"category_scores_gemma":[0.00014391346,0.00014232847,0.000058364014,0.00020461556,0.00021020832,0.000060906117,0.00006706031,0.00017838556,0.000004146148],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001154227,0.00017277576,0.63598883,0.00017415358,0.00002343882,0.0000048927186,0.0006223234,0.00001014428,0.3487715,0.00004052276,0.000042352876,0.012994832],"study_design_scores_gemma":[0.0016548942,0.00062261254,0.9851981,0.00008172253,0.000050527222,0.00000812496,0.00090594735,0.00015658235,0.008891518,0.000046408382,0.002241297,0.00014230455],"about_ca_topic_score_codex":0.0057849307,"about_ca_topic_score_gemma":0.014940911,"teacher_disagreement_score":0.34920925,"about_ca_system_score_codex":0.00007238503,"about_ca_system_score_gemma":0.0001134057,"threshold_uncertainty_score":0.8745124},"labels":[],"label_agreement":null},{"id":"W2063738870","doi":"10.1111/j.1600-6143.2009.02910.x","title":"Invasive Aspergillosis in Solid Organ Transplant Recipients","year":2009,"lang":"en","type":"article","venue":"American Journal of Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":124,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Aspergillosis; Medicine; Organ transplantation; Solid organ; Complication; Transplantation; Mycosis; Surgery; Immunology","score_opus":0.009264414461441701,"score_gpt":0.28610906563644106,"score_spread":0.27684465117499935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063738870","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969025,0.00007381275,0.0014301545,0.0010002754,0.00006904855,0.00009991255,0.000009983681,0.0000076956285,0.00040656244],"genre_scores_gemma":[0.996065,0.0022063619,0.0010488399,0.0005731253,0.000058702266,5.9864783e-7,0.000015090463,0.000007886366,0.00002439005],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99878067,0.00007045848,0.0005129077,0.00013052033,0.0003232267,0.00018222316],"domain_scores_gemma":[0.9993279,0.00007803291,0.00023120978,0.0000983043,0.0001361371,0.00012842008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025938937,0.00011261598,0.00039875685,0.00023102772,0.000028834866,0.000008273854,0.000079629084,0.000036002515,0.00003769537],"category_scores_gemma":[0.00003774887,0.00009161269,0.00012730989,0.000372357,0.0000803973,0.0001670476,7.488281e-7,0.00023204616,0.0000057104826],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0052423147,0.0004096731,0.8444479,0.000053398577,0.00006712011,0.000981631,0.004883808,0.00005506914,0.09369402,0.00003900102,0.000032332497,0.0500937],"study_design_scores_gemma":[0.0015126527,0.0020432516,0.9753431,0.00059912086,0.00014853451,0.0004275611,0.0005101145,0.00001000539,0.019209146,0.00009402238,0.000009914989,0.00009255836],"about_ca_topic_score_codex":0.000033983542,"about_ca_topic_score_gemma":0.00011093652,"teacher_disagreement_score":0.13089518,"about_ca_system_score_codex":0.00008734705,"about_ca_system_score_gemma":0.00014258637,"threshold_uncertainty_score":0.3735857},"labels":[],"label_agreement":null},{"id":"W2064581920","doi":"10.1097/rhu.0b013e318188bea7","title":"Voriconazole-Associated Myositis","year":2009,"lang":"en","type":"article","venue":"JCR Journal of Clinical Rheumatology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Georgetown Hospital","funders":"","keywords":"Voriconazole; Aspergillosis; Medicine; Myositis; Inflammatory myopathy; Internal medicine; Differential diagnosis; Myopathy; Rhabdomyolysis; Gastroenterology; Intensive care medicine; Pathology; Dermatology; Antifungal; Immunology","score_opus":0.050583032949762075,"score_gpt":0.42392368620903365,"score_spread":0.37334065325927157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064581920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879535,0.00077417353,0.00045945973,0.0073341923,0.00074718765,0.0000757808,0.0000018269149,0.000019730336,0.002634184],"genre_scores_gemma":[0.9956655,0.0012732127,0.0006263404,0.0019470544,0.00010933043,2.392194e-7,0.0000024044052,0.00000788233,0.0003680412],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968707,0.0002619265,0.002066018,0.0001762144,0.00034215557,0.00028300483],"domain_scores_gemma":[0.9969507,0.001031368,0.0009322175,0.00022640197,0.0005198144,0.00033951623],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0020514268,0.00012576637,0.0013202078,0.000086074324,0.00004834516,0.000009440474,0.00015757303,0.00034037477,0.00025202535],"category_scores_gemma":[0.008552187,0.000093449155,0.00059074874,0.00015703023,0.00016280057,0.00009203119,0.00001516532,0.0008586864,0.000059410253],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013237806,0.0008855417,0.950204,0.000016526514,0.00016067932,0.00042875865,0.000044150336,6.500643e-7,0.00013638979,0.0012783962,0.011927677,0.033593435],"study_design_scores_gemma":[0.0033767682,0.0021382817,0.986948,0.00019238329,0.00011774567,0.0008226559,0.000059167647,0.00003321166,0.000054730233,0.0031643584,0.003005027,0.00008764861],"about_ca_topic_score_codex":0.0000056962585,"about_ca_topic_score_gemma":0.000009416963,"teacher_disagreement_score":0.03674401,"about_ca_system_score_codex":0.000043043663,"about_ca_system_score_gemma":0.0003918203,"threshold_uncertainty_score":0.9997992},"labels":[],"label_agreement":null},{"id":"W2065261962","doi":"10.1016/j.diagmicrobio.2013.08.007","title":"Identification of fungal pathogens from clinical specimens using multi-locus PCR coupled with electrospray ionization mass spectrometry","year":2013,"lang":"en","type":"article","venue":"Diagnostic Microbiology and Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cheng Kung University Hospital; Beef Cattle Research Council; National Health Research Institutes","keywords":"Electrospray ionization; Mass spectrometry; Polymerase chain reaction; Electrospray; Chromatography; Extractive electrospray ionization; Microbiology; Biology; Chemistry; Sample preparation in mass spectrometry; Gene; Biochemistry","score_opus":0.013154131754739257,"score_gpt":0.2737410263362171,"score_spread":0.2605868945814779,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065261962","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.974071,0.0009440482,0.023910904,0.00007375217,0.00013798338,0.0006707406,0.00013129589,0.000041427895,0.000018815743],"genre_scores_gemma":[0.99830455,0.00043219485,0.00060588407,0.00017971855,0.00011332969,0.000019162517,0.00027720723,0.000018383367,0.00004955393],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985531,0.00015271168,0.0005283963,0.00045076682,0.00006575228,0.00024926747],"domain_scores_gemma":[0.9983481,0.00061231543,0.00024269373,0.00030983752,0.0002791681,0.00020784818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022127945,0.00018049277,0.00040119892,0.00009158754,0.00011659858,0.000020306708,0.000048047776,0.00015988351,0.00031446153],"category_scores_gemma":[0.0014771186,0.00014546854,0.00009519368,0.00019855116,0.00036431188,0.00009874126,0.000021378295,0.0002013674,0.000037924758],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015904008,0.00035766294,0.57977957,0.00003304069,0.000081614526,0.000016883163,0.000017585375,0.000007188889,0.41941223,0.000029002062,0.000040877636,0.000065289925],"study_design_scores_gemma":[0.0017954751,0.00037616075,0.9868698,0.000072287075,0.00044765105,0.000021418862,0.00004181584,0.0012093668,0.008813461,0.00017814492,0.0000105732815,0.000163839],"about_ca_topic_score_codex":0.00009491269,"about_ca_topic_score_gemma":0.00007082953,"teacher_disagreement_score":0.41059878,"about_ca_system_score_codex":0.000063907064,"about_ca_system_score_gemma":0.00015562761,"threshold_uncertainty_score":0.59320354},"labels":[],"label_agreement":null},{"id":"W2065911445","doi":"10.1016/j.fgb.2005.04.003","title":"Taf1: A class II transposon of Aspergillus fumigatus","year":2005,"lang":"en","type":"article","venue":"Fungal Genetics and Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Transposase; Transposable element; Genetics; Aspergillus fumigatus; Insertion sequence; TAF1; Microbiology; Gene; Genome","score_opus":0.02752018451742373,"score_gpt":0.29674090581303275,"score_spread":0.26922072129560903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065911445","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98937404,0.0063767605,0.000108070984,0.0009051083,0.00007259844,0.0001331578,0.00004418258,0.000013591816,0.0029724734],"genre_scores_gemma":[0.9957985,0.0016751313,0.001310558,0.00033221074,0.00017188568,0.0000036618212,0.000019342346,0.000007677401,0.0006810165],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99924713,0.000028249484,0.00023404456,0.00022124228,0.000060462637,0.00020884261],"domain_scores_gemma":[0.99957407,0.000027659353,0.000043371525,0.00018253086,0.00007056504,0.00010178768],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010787884,0.00010727906,0.00027931933,0.000038465896,0.000055528144,0.0000021962508,0.000050240586,0.00016680392,0.00013829421],"category_scores_gemma":[0.000021653983,0.000080517915,0.00007367712,0.00007054014,0.00020714435,0.000010630771,0.00002819284,0.00011972863,0.000005908942],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006600713,0.0002721495,0.41145778,0.00011575128,0.00008341193,0.000007373583,0.00036891457,0.000004317893,0.48809782,0.002841077,0.00045862477,0.09563271],"study_design_scores_gemma":[0.0021072729,0.0036975346,0.6823957,0.00006192485,0.0001606813,0.000052496507,0.00013305453,0.0005051182,0.066637725,0.00054888544,0.24343753,0.0002620863],"about_ca_topic_score_codex":0.00001204852,"about_ca_topic_score_gemma":0.000101608646,"teacher_disagreement_score":0.4214601,"about_ca_system_score_codex":0.000013622353,"about_ca_system_score_gemma":0.000052920408,"threshold_uncertainty_score":0.32834253},"labels":[],"label_agreement":null},{"id":"W2066381032","doi":"10.1080/13693780400019990","title":"Long-term antifungal prophylaxis in high-risk hematopoietic stem cell transplant recipients","year":2005,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Aspergillosis; Voriconazole; Posaconazole; Immunosuppression; Micafungin; Medicine; Azole; Echinocandin; Itraconazole; Hematopoietic stem cell transplantation; Internal medicine; Transplantation; Immunology; Fluconazole; Antifungal; Dermatology","score_opus":0.026158646663571386,"score_gpt":0.32091418211527417,"score_spread":0.2947555354517028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066381032","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.089627005,0.9067722,0.00006754944,0.00010815954,0.00092497934,0.0018220401,0.00009830174,0.0000822508,0.00049750466],"genre_scores_gemma":[0.14516692,0.8522351,0.000044122102,0.00013666677,0.00049492985,0.00016256182,0.00023053405,0.000078943776,0.0014502143],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99379426,0.00095209194,0.001830451,0.0012493697,0.0011481142,0.0010257312],"domain_scores_gemma":[0.9970213,0.000814509,0.000447083,0.0008996334,0.0000753637,0.00074210885],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.001416259,0.0007335173,0.0041955183,0.00042942827,0.00008882248,0.000015143502,0.0005718781,0.00226816,0.0033717433],"category_scores_gemma":[0.00023481465,0.00052633276,0.00072133663,0.0006233509,0.00049164623,0.00005038219,0.000120327546,0.0030480844,0.0007920383],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021781419,0.0012454983,0.058668613,0.022136444,0.00012953064,0.0042084674,0.00016394984,5.037587e-8,0.0000014326833,0.000032409123,0.00043572462,0.9127601],"study_design_scores_gemma":[0.0096533755,0.0053915107,0.16614589,0.08812684,0.005541672,0.0025766722,0.00006531483,0.000012805205,0.000021981705,0.00006209429,0.7199249,0.0024768896],"about_ca_topic_score_codex":0.000057123467,"about_ca_topic_score_gemma":0.00038952476,"teacher_disagreement_score":0.91028315,"about_ca_system_score_codex":0.00048569197,"about_ca_system_score_gemma":0.0014601918,"threshold_uncertainty_score":0.99998593},"labels":[],"label_agreement":null},{"id":"W2066632508","doi":"10.1128/aac.45.5.1561-1564.2001","title":"Pharmacokinetics of Itraconazole Oral Solution in Neutropenic Children during Long-Term Prophylaxis","year":2001,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Itraconazole; Pharmacokinetics; Medicine; Plasma concentration; Neutropenia; Pharmacology; Oral administration; Internal medicine; Chemotherapy; Antifungal; Dermatology","score_opus":0.014412446658582273,"score_gpt":0.2844994592309851,"score_spread":0.2700870125724028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066632508","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99884,0.00008436093,0.000029365148,0.0004286413,0.00004156361,0.00039600386,0.0000074591967,0.000016337654,0.00015630927],"genre_scores_gemma":[0.99544525,0.003176408,0.00009485434,0.00076951063,0.000066429035,0.0000020137365,0.000022039609,0.000018310717,0.0004051807],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99910754,0.00002120005,0.00027157922,0.00024992475,0.00011227881,0.00023747182],"domain_scores_gemma":[0.99966353,0.0000050474464,0.00007289103,0.0001536534,0.000042163036,0.00006273292],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008268722,0.00014007735,0.00028345024,0.00006982304,0.00004837877,0.000012196939,0.00006680289,0.00007942448,0.0001882934],"category_scores_gemma":[0.000003975019,0.00012164055,0.00007765749,0.00015632753,0.00010262593,0.000078155965,0.000023927885,0.00014223979,0.000004742391],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006925131,0.0003372252,0.7767142,0.000088128516,0.000037627786,0.000016638032,0.0000970289,0.0000010524407,0.21627833,0.0000011494286,0.00026113944,0.005474951],"study_design_scores_gemma":[0.0035521425,0.00013426563,0.93739337,0.00009321323,0.000023423794,0.000043173037,0.000005739689,0.000018065477,0.05851953,0.0000025835805,0.00010439463,0.00011012061],"about_ca_topic_score_codex":0.00008491408,"about_ca_topic_score_gemma":0.000050725415,"teacher_disagreement_score":0.16067913,"about_ca_system_score_codex":0.000031162275,"about_ca_system_score_gemma":0.0000276217,"threshold_uncertainty_score":0.49603575},"labels":[],"label_agreement":null},{"id":"W2066835384","doi":"10.1038/nm.2175","title":"Modulation of histone H3 lysine 56 acetylation as an antifungal therapeutic strategy","year":2010,"lang":"en","type":"article","venue":"Nature Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":159,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Canadian Institutes of Health Research","keywords":"Candida albicans; Acetylation; Corpus albicans; Biology; Histone; Histone acetyltransferase; Acetyltransferase; Histone deacetylase; Microbiology; Gene; Cancer research; Biochemistry","score_opus":0.01623318213805884,"score_gpt":0.38044473406518087,"score_spread":0.364211551927122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066835384","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9889096,0.0015111661,0.00041744916,0.0019259528,0.0005545393,0.00038155616,0.0000054943725,0.000071072565,0.0062231617],"genre_scores_gemma":[0.99615484,0.000056768473,0.0003594065,0.00061074324,0.0008830849,0.0000036819306,0.00021325218,0.000025780291,0.001692437],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99820906,0.000057266076,0.0004405682,0.00038072385,0.00068692106,0.00022546777],"domain_scores_gemma":[0.9984363,0.000082130944,0.00019422812,0.0006265778,0.00048443986,0.00017634693],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00064767024,0.00020493951,0.0004998002,0.0001713746,0.00007364897,0.0000053502376,0.00011828534,0.000525336,0.0011955213],"category_scores_gemma":[0.00043815904,0.00014636155,0.00010317369,0.000390615,0.00032853076,0.00017872764,0.0000129737455,0.001142371,0.000014279006],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007090347,0.00024047859,0.03607392,0.0001225203,0.000057843394,0.000014477036,0.00026809442,0.000005600491,0.93389326,0.004741871,0.00047212868,0.023400785],"study_design_scores_gemma":[0.0026148995,0.0014463377,0.9565808,0.0001424392,0.00028192793,0.000042497846,0.00027742886,0.0017748894,0.03192086,0.0025483354,0.0021870828,0.00018246743],"about_ca_topic_score_codex":0.00011673533,"about_ca_topic_score_gemma":0.00022304588,"teacher_disagreement_score":0.9205069,"about_ca_system_score_codex":0.000050295548,"about_ca_system_score_gemma":0.00015636864,"threshold_uncertainty_score":0.99971753},"labels":[],"label_agreement":null},{"id":"W2067396122","doi":"10.1007/s10096-011-1229-7","title":"A prospective survey of Aspergillus spp. in respiratory tract samples: prevalence, clinical impact and antifungal susceptibility","year":2011,"lang":"en","type":"article","venue":"European Journal of Clinical Microbiology & Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":91,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre","funders":"","keywords":"Posaconazole; Voriconazole; Aspergillus fumigatus; Itraconazole; Aspergillosis; Medicine; Amphotericin B; Internal medicine; Aspergillus terreus; Medical microbiology; Aspergillus; Population; Microbiology; Biology; Immunology; Antifungal","score_opus":0.10446625051746014,"score_gpt":0.38982629902400967,"score_spread":0.2853600485065495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067396122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99540657,0.0025701153,0.000050520932,0.0000109390085,0.0004159242,0.00041474728,0.00024600746,0.000022887974,0.0008622774],"genre_scores_gemma":[0.99804586,0.0013430802,0.00011218594,0.00019541809,0.00023681464,8.9562076e-7,0.00001065955,0.000032592452,0.000022467751],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.98898077,0.006351457,0.0035470817,0.0006133848,0.00013103192,0.00037627082],"domain_scores_gemma":[0.9942526,0.0023117978,0.001532853,0.00052471634,0.0008791346,0.00049885747],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.011387472,0.00030999098,0.0017514839,0.000201532,0.00005954178,0.00001144223,0.00024418172,0.00019704447,0.0003669087],"category_scores_gemma":[0.015334594,0.00022164892,0.0008921933,0.0002893132,0.0018886667,0.00017275219,0.00011079985,0.0011493786,0.000019610563],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006161127,0.004592659,0.98179686,0.00013825316,0.00032387095,0.00030250812,0.00008140017,6.197354e-7,0.0012997893,0.0000052937885,0.0002697273,0.0050278693],"study_design_scores_gemma":[0.005062338,0.009871421,0.9838349,0.00029528164,0.0003034152,0.00016950053,0.000042696567,7.8175475e-7,0.000057155034,0.00007466913,0.00010233642,0.00018549156],"about_ca_topic_score_codex":0.00007333621,"about_ca_topic_score_gemma":0.00021534282,"teacher_disagreement_score":0.005278762,"about_ca_system_score_codex":0.000072109484,"about_ca_system_score_gemma":0.0007558858,"threshold_uncertainty_score":0.9929597},"labels":[],"label_agreement":null},{"id":"W2067459366","doi":"10.1016/s1369-5274(00)00144-2","title":"Transcriptional control of cell type and morphogenesis in Candida albicans","year":2000,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Biology; Morphogenesis; Candida albicans; Transcription factor; Cell biology; Mating type; Transcriptional regulation; Phenotype; Cell type; Genetics; Transcription (linguistics); Yeast; Cell; Gene","score_opus":0.06366095553813107,"score_gpt":0.36285123933347463,"score_spread":0.29919028379534357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067459366","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023492207,0.99556446,0.000013204443,0.000018647846,0.00086183654,0.0006864255,0.00043852127,0.0000052957002,0.00006236788],"genre_scores_gemma":[0.0045840857,0.99436843,0.000022537175,0.000012425062,0.00008803331,0.000027353322,0.0008132032,0.000015796886,0.00006814486],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983592,0.00021355596,0.00072925584,0.00040933862,0.00004562959,0.00024299395],"domain_scores_gemma":[0.99942803,0.00012313083,0.0001425181,0.00019933359,0.00005059131,0.000056421708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020934155,0.00024911165,0.0015425447,0.00026618326,0.0000129986975,0.0000023239413,0.000092928654,0.0003176529,0.0003837977],"category_scores_gemma":[0.000028536175,0.00020193438,0.00017060507,0.00030355513,0.00019713747,0.000015580925,0.000012727713,0.00037732403,0.000015854046],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00095844833,0.0012139878,0.026830943,0.095905185,0.00013380259,0.00001004544,0.00020188079,0.0000016668467,0.0052751084,0.00020927339,0.0016678522,0.8675918],"study_design_scores_gemma":[0.001275609,0.00016267483,0.0018098442,0.00827622,0.00011307592,0.000034313976,0.0000099315,0.000001519408,0.000004965588,0.000006291605,0.9881416,0.0001639527],"about_ca_topic_score_codex":0.000043777938,"about_ca_topic_score_gemma":0.000043822463,"teacher_disagreement_score":0.98647374,"about_ca_system_score_codex":0.00010441112,"about_ca_system_score_gemma":0.0004924199,"threshold_uncertainty_score":0.8234645},"labels":[],"label_agreement":null},{"id":"W2067559790","doi":"10.1371/journal.ppat.1003446","title":"Bruton's Tyrosine Kinase (BTK) and Vav1 Contribute to Dectin1-Dependent Phagocytosis of Candida albicans in Macrophages","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto; St. Michael's Hospital","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Bruton's tyrosine kinase; Phagocytosis; Candida albicans; Phagosome; Microbiology; Biology; Immune system; Tyrosine kinase; Corpus albicans; Innate immune system; Cell biology; Immunology; Signal transduction","score_opus":0.013627760552791473,"score_gpt":0.2546290673403483,"score_spread":0.24100130678755682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067559790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99637043,0.0009390551,0.00007482349,0.0009587721,0.000046540867,0.0008969953,0.0001916163,0.000032057706,0.0004896838],"genre_scores_gemma":[0.99783874,0.00020442139,0.0005507068,0.00044344776,0.000051270308,0.00007077832,0.00001696505,0.00002442558,0.00079925096],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984046,0.00004898128,0.00039479887,0.00041331633,0.00033678635,0.00040149185],"domain_scores_gemma":[0.9988569,0.00012492506,0.00008283638,0.00039224938,0.00022857616,0.00031451104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022004762,0.00019762252,0.00055284466,0.00015515057,0.000053558255,0.00001867667,0.00008119099,0.00010181119,0.0005227672],"category_scores_gemma":[0.00046832862,0.00016833603,0.00008176623,0.0002991888,0.00009200213,0.000078555924,0.00007477676,0.00016672938,0.000053431377],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018513075,0.00029189436,0.4816511,0.0001382863,0.00004335241,0.00010377284,0.00030798354,0.00000145061,0.5155965,0.000023152963,0.00024715668,0.0014101886],"study_design_scores_gemma":[0.0015835257,0.0003947359,0.805082,0.00019491187,0.00011711488,0.000012176092,0.00033383112,0.000072038994,0.19184314,0.000052104744,0.00014091512,0.00017349645],"about_ca_topic_score_codex":0.0009850947,"about_ca_topic_score_gemma":0.0013966293,"teacher_disagreement_score":0.3237534,"about_ca_system_score_codex":0.00011613003,"about_ca_system_score_gemma":0.00009463665,"threshold_uncertainty_score":0.68645436},"labels":[],"label_agreement":null},{"id":"W2068179542","doi":"10.1046/j.1365-2672.2002.01560.x","title":"A quantitative study of the survival of two species of Candida on porous and non-porous environmental surfaces and hands","year":2002,"lang":"en","type":"article","venue":"Journal of Applied Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Centre Hospitalier Universitaire de Clermont-Ferrand","keywords":"Candida albicans; Candida parapsilosis; Relative humidity; Corpus albicans; Microbiology; Polyester; Biology; Materials science; Composite material","score_opus":0.018881703110290228,"score_gpt":0.2521987821639525,"score_spread":0.23331707905366225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068179542","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987122,0.0004374579,0.0000033364238,0.00005022898,0.000049842216,0.00022150346,0.000027629987,7.605763e-7,0.00049708725],"genre_scores_gemma":[0.9995559,0.0002259662,0.00008026604,0.000024297504,0.000014951195,4.771277e-7,0.0000010367071,0.0000056680497,0.000091473295],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99917734,0.000041547697,0.0004629828,0.000119009506,0.00009505849,0.000104053084],"domain_scores_gemma":[0.99913406,0.00015981574,0.00050502946,0.00012946811,0.000038651353,0.000032971322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028874917,0.00010439747,0.0005733479,0.000056824727,0.000032422708,0.000001838241,0.000071037015,0.000052845444,0.000048145936],"category_scores_gemma":[0.000021136753,0.00006257167,0.000049582173,0.000053559612,0.0004823936,0.000016154703,0.000042306387,0.00016201605,3.7092624e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014376842,0.000630882,0.19724253,0.000043269214,0.00015378316,0.000007583824,0.0027338162,0.000008145091,0.797452,0.000083806175,0.00006716134,0.00013938082],"study_design_scores_gemma":[0.008829398,0.009706759,0.8178267,0.00010307946,0.0002910165,0.00011536636,0.01985186,0.000010799809,0.14301677,0.000068737114,0.000055129363,0.00012437014],"about_ca_topic_score_codex":0.000029895209,"about_ca_topic_score_gemma":0.00015612124,"teacher_disagreement_score":0.6544352,"about_ca_system_score_codex":0.000023861754,"about_ca_system_score_gemma":0.000020700372,"threshold_uncertainty_score":0.25515985},"labels":[],"label_agreement":null},{"id":"W2068750743","doi":"10.1128/jcm.01912-14","title":"Instability of Aspergillus Galactomannan in Stored Clinical Samples","year":2014,"lang":"en","type":"letter","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Galactomannan; Aspergillus; Microbiology; Aspergillosis; Fungi imperfecti; Biology; Medicine; Immunology","score_opus":0.1333145419802002,"score_gpt":0.42804866135509717,"score_spread":0.29473411937489696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068750743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85017145,0.0007922921,0.00011547513,0.14563365,0.0023980883,0.0003582128,0.00007346883,0.000010687188,0.00044664895],"genre_scores_gemma":[0.7810473,0.000980352,0.0018590171,0.20941217,0.006193338,0.0000015149253,0.00010871961,0.00004900118,0.0003486341],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.98763806,0.002796575,0.008152183,0.0006550286,0.00023065772,0.0005274919],"domain_scores_gemma":[0.98726547,0.0066179284,0.004004372,0.00092997996,0.00095696095,0.00022528417],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.010021949,0.0004017301,0.0051360955,0.00028586684,0.000024356284,0.0000070028204,0.00056448835,0.0034996956,0.00035213615],"category_scores_gemma":[0.015081387,0.0002825122,0.0023115696,0.00018205063,0.0017299353,0.000059524777,0.00012250885,0.0076195206,0.000026278261],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002835402,0.0007315432,0.64165837,0.00041032984,0.0003119542,0.0003840589,0.000021436495,2.984973e-7,0.0010107323,0.000006623331,0.34902635,0.0036028717],"study_design_scores_gemma":[0.0031860154,0.0029166606,0.4298441,0.00049552607,0.00023303961,0.00025329975,0.000017698841,0.0000012583893,0.00004971757,0.00018211415,0.56264424,0.00017632564],"about_ca_topic_score_codex":0.000033118515,"about_ca_topic_score_gemma":0.00011584535,"teacher_disagreement_score":0.21361788,"about_ca_system_score_codex":0.00012435828,"about_ca_system_score_gemma":0.0013095195,"threshold_uncertainty_score":0.9999627},"labels":[],"label_agreement":null},{"id":"W2068905353","doi":"10.1128/aac.48.1.333-336.2004","title":"Effect of Heat-Treated Amphotericin B on Renal and Fungal Cytotoxicity","year":2003,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Amphotericin B; Cytotoxicity; Kidney; Cryptococcus; Microbiology; Cryptococcus neoformans; Pharmacology; Cryptococcosis; Biology; Antifungal; Chemistry; In vitro; Biochemistry; Endocrinology","score_opus":0.008453772934804331,"score_gpt":0.2661819556951777,"score_spread":0.2577281827603734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068905353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99836016,0.0000391146,0.000022196316,0.0002210931,0.000027890976,0.00031924926,0.0000124407325,0.000018807497,0.000979031],"genre_scores_gemma":[0.9967935,0.0005417267,0.00007190736,0.002178193,0.000025698158,0.0000018931438,0.0000073600954,0.000017050475,0.00036268195],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991366,0.00007997027,0.00019215971,0.00028423476,0.00011393456,0.00019310147],"domain_scores_gemma":[0.99960756,0.000049674505,0.000042447657,0.00017592814,0.00003045352,0.000093911214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022011636,0.0001816963,0.00039820693,0.000045125875,0.00007153758,0.00001310569,0.000030142559,0.00009616329,0.00012650438],"category_scores_gemma":[0.000025756026,0.0001298255,0.00007890217,0.00009607694,0.00014747569,0.00003266472,0.000008192548,0.00010807665,0.000003437487],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026978587,0.0002479212,0.5403458,0.000239483,0.000093252864,0.00002655264,0.00012892236,5.2129974e-7,0.45070678,0.000038233753,0.0024160207,0.0030586717],"study_design_scores_gemma":[0.0034540226,0.0016317929,0.30539703,0.00016508445,0.000047457,0.00003645191,0.000008259392,0.000017177246,0.6875436,0.00000725442,0.0015684688,0.00012344152],"about_ca_topic_score_codex":0.000056312867,"about_ca_topic_score_gemma":0.0000059066197,"teacher_disagreement_score":0.23683678,"about_ca_system_score_codex":0.000018974826,"about_ca_system_score_gemma":0.000018150004,"threshold_uncertainty_score":0.52941304},"labels":[],"label_agreement":null},{"id":"W2069650871","doi":"10.1111/j.1462-5822.2008.01247.x","title":"Polarized response of endothelial cells to invasion by<i>Aspergillus fumigatus</i>","year":2008,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; Health Canada; NIH Clinical Center; National Institutes of Health","keywords":"Aspergillus fumigatus; Biology; Endothelial stem cell; Cell biology; Endothelium; Pseudopodia; Microfilament; Cell; Microbiology; Pathology; Immunology; Cytoskeleton; Actin; In vitro; Medicine","score_opus":0.013448705849519323,"score_gpt":0.22905507958582205,"score_spread":0.21560637373630273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069650871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99688995,0.0006861287,0.00084450206,0.00033301115,0.00023620803,0.00042318902,0.00028833695,0.000038465085,0.00026018367],"genre_scores_gemma":[0.9918805,0.000098761724,0.0008312718,0.0009964865,0.000057483954,0.0000047575554,0.00012916123,0.00002477549,0.005976819],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99842304,0.00026668882,0.00042185906,0.00042812157,0.00008442071,0.00037588505],"domain_scores_gemma":[0.9989108,0.00016204701,0.00009308264,0.0005205625,0.00013069865,0.0001828038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042504357,0.0001947014,0.00055397034,0.0001089783,0.000091764035,0.0000023991265,0.00015843702,0.00025526303,0.0003250971],"category_scores_gemma":[0.00022586444,0.00016573613,0.00015832587,0.00019695277,0.00034301073,0.00002620693,0.000084031424,0.00021279298,0.00029528473],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0064706607,0.0001915574,0.004554987,0.000038170456,0.000031929863,0.00010527788,0.00029624355,3.3226829e-7,0.9801508,0.000010912652,0.008103481,0.000045646902],"study_design_scores_gemma":[0.0015270001,0.00076128886,0.0016832883,0.000032503336,0.000029858398,0.00009775697,0.00005291596,0.000001214066,0.9430478,0.0000058815626,0.052617483,0.00014296024],"about_ca_topic_score_codex":0.000059522325,"about_ca_topic_score_gemma":0.0000086031805,"teacher_disagreement_score":0.044514,"about_ca_system_score_codex":0.00007642572,"about_ca_system_score_gemma":0.00021140417,"threshold_uncertainty_score":0.6758523},"labels":[],"label_agreement":null},{"id":"W2069688305","doi":"10.1371/journal.pone.0072280","title":"Composite Survival Index to Compare Virulence Changes in Azole-Resistant Aspergillus fumigatus Clinical Isolates","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Virulence; Aspergillus fumigatus; Microbiology; Aspergillosis; Biology; Azole; In vivo; Drug resistance; Aspergillus; Immunology; Antifungal; Genetics; Gene","score_opus":0.08427038599950991,"score_gpt":0.3131723297058478,"score_spread":0.22890194370633787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069688305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933104,0.00038157665,0.000029561686,0.0033592123,0.00008815532,0.0009036512,0.000023950188,0.00008577187,0.0018177243],"genre_scores_gemma":[0.9966993,0.00018021933,0.00076145737,0.0012976738,0.00019732295,0.00005587907,0.00002300421,0.00002772058,0.0007574465],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977203,0.0001445192,0.0005879029,0.0005303653,0.00051320734,0.00050370826],"domain_scores_gemma":[0.9984024,0.00026381537,0.000088399196,0.000567538,0.00026385344,0.0004139681],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045350142,0.00023010511,0.0008419227,0.00012424194,0.00007430516,0.000038600632,0.00020687704,0.000114345574,0.00053484866],"category_scores_gemma":[0.0003300833,0.00019995414,0.00009551141,0.00032805407,0.00015597949,0.00010460336,0.00012431483,0.00047443816,0.00061516894],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009057882,0.0019864754,0.9052565,0.00021312827,0.00010954744,0.000028562776,0.00020129028,0.0000016089074,0.09023122,0.000036512447,0.0002524254,0.00077695533],"study_design_scores_gemma":[0.001117742,0.00045532384,0.9889736,0.0007760989,0.00007084743,8.7105116e-7,0.00030775712,0.00079142366,0.0070742588,0.000071548304,0.00012725922,0.0002332428],"about_ca_topic_score_codex":0.0007804331,"about_ca_topic_score_gemma":0.0043830452,"teacher_disagreement_score":0.083717145,"about_ca_system_score_codex":0.00011284258,"about_ca_system_score_gemma":0.000073626776,"threshold_uncertainty_score":0.81538934},"labels":[],"label_agreement":null},{"id":"W2069785345","doi":"10.1016/j.micres.2008.03.001","title":"Transcript profiling of a MAP kinase pathway in C. albicans","year":2008,"lang":"en","type":"article","venue":"Microbiological Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"","keywords":"Biology; Candida albicans; Transcription factor; Filamentation; Cell biology; Transcription (linguistics); Gene; Genetics","score_opus":0.18155246501664504,"score_gpt":0.3877992730198301,"score_spread":0.20624680800318504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069785345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953763,0.0008974064,0.00006156535,0.0006079974,0.000021035348,0.0005144515,0.000026035625,0.000019187337,0.0024760051],"genre_scores_gemma":[0.9971736,0.00014066498,0.0008448066,0.00008055818,0.00002916898,0.000022037057,0.000028425566,0.000007796469,0.0016729152],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99819726,0.00028563454,0.00034668786,0.00037434805,0.00026109585,0.00053499005],"domain_scores_gemma":[0.99905914,0.00026483648,0.000022931586,0.00029515132,0.00023154376,0.00012640866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013553199,0.00010463084,0.00036775126,0.00015198017,0.0000818516,0.0000034480581,0.00016087518,0.00018320668,0.00033476704],"category_scores_gemma":[0.0007147151,0.0000707423,0.00012182736,0.00045548548,0.00080209464,0.000027735481,0.00005452554,0.0006737598,0.00006548923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007134005,0.00045157515,0.13192548,0.00012277211,0.00000689882,0.00026669947,0.00017116105,4.05596e-7,0.8649132,0.00024546267,0.0004634122,0.0007194849],"study_design_scores_gemma":[0.0015410531,0.0012944553,0.22843806,0.0002024204,0.0000034633001,0.000040046405,0.0005551558,0.000019568271,0.76095694,0.0002990645,0.0065069897,0.00014278373],"about_ca_topic_score_codex":0.00012330331,"about_ca_topic_score_gemma":0.00008141273,"teacher_disagreement_score":0.10395631,"about_ca_system_score_codex":0.00009803322,"about_ca_system_score_gemma":0.00026965042,"threshold_uncertainty_score":0.36654642},"labels":[],"label_agreement":null},{"id":"W2069880599","doi":"10.14740/jocmr2104w","title":"Fungal Infections in Renal Transplant Patients","year":2015,"lang":"en","type":"review","venue":"Journal of Clinical Medicine Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Calcineurin; Medicine; Tacrolimus; Immunosuppression; Organ transplantation; Aspergillosis; Renal transplant; Transplantation; Transplant rejection; Immunology; Immunosuppressive drug; Cryptococcus; Immune system; Intensive care medicine; Internal medicine; Biology; Microbiology","score_opus":0.558155318216842,"score_gpt":0.6435350316747936,"score_spread":0.0853797134579517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069880599","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002448893,0.9886218,0.000014713528,0.00063389156,0.0009315341,0.00089282077,0.00001723637,0.000007704982,0.006431426],"genre_scores_gemma":[0.002897571,0.99306315,0.000058822585,0.000053144366,0.0032333152,0.000010988629,0.000029814053,0.000041900697,0.0006112731],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98784214,0.0027196484,0.005233155,0.00042687458,0.0031643512,0.0006138236],"domain_scores_gemma":[0.98862803,0.005835848,0.0010835516,0.00056979666,0.0026993204,0.0011834783],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.03013224,0.00032862969,0.0054137083,0.0013230988,0.000065172026,0.000013224207,0.0004287817,0.0007864043,0.0002933113],"category_scores_gemma":[0.017564628,0.00018443466,0.0010985989,0.0013775561,0.00085707393,0.000111542075,0.00007250308,0.0077832653,0.0000767618],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007879112,0.0016043547,0.07634122,0.005748402,0.00024081826,0.0011908115,0.00006527556,8.8209006e-8,1.3264133e-7,0.000018074177,0.019858617,0.8941443],"study_design_scores_gemma":[0.004162667,0.007370761,0.010305394,0.05928295,0.00071784155,0.00039234728,0.000041531795,0.0000017967766,9.453346e-8,0.00013705302,0.9174548,0.00013279119],"about_ca_topic_score_codex":0.000037930386,"about_ca_topic_score_gemma":0.00006343253,"teacher_disagreement_score":0.8975962,"about_ca_system_score_codex":0.000443649,"about_ca_system_score_gemma":0.0050923293,"threshold_uncertainty_score":0.998683},"labels":[],"label_agreement":null},{"id":"W2069906206","doi":"10.1128/aac.49.4.1597-1599.2005","title":"Antifungal Activity of Flocculosin, a Novel Glycolipid Isolated from <i>Pseudozyma flocculosa</i>","year":2005,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôtel-Dieu de Québec; Centre hospitalier universitaire de Québec; Université Laval","funders":"","keywords":"Glycolipid; Antifungal; Yeast; Amphotericin B; Cytotoxicity; In vitro; Microbiology; Fungus; Chemistry; Biology; Biochemistry; Botany","score_opus":0.014253189953623359,"score_gpt":0.26541036438035276,"score_spread":0.2511571744267294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069906206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99458766,0.00006636636,0.0010845333,0.0027731839,0.00011427028,0.00039402724,0.0001803058,0.000056639677,0.0007430206],"genre_scores_gemma":[0.9890097,0.00063353864,0.0017745916,0.007667054,0.00031114198,0.0000027923136,0.00004826335,0.000038019196,0.0005148938],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984993,0.00002761434,0.00038328746,0.0005069501,0.00023195439,0.00035089388],"domain_scores_gemma":[0.999107,0.000037411246,0.00016021014,0.00040585388,0.00012867729,0.0001608308],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00012811253,0.00028924595,0.0006101082,0.00006664056,0.000111179645,0.000036816764,0.00012363697,0.000209222,0.0005727939],"category_scores_gemma":[0.000018198045,0.00024938746,0.00021294711,0.0002029938,0.00020784479,0.00017933341,0.000046552865,0.0002227066,0.000022152695],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025467218,0.0012756232,0.10092356,0.00010092091,0.00025054262,0.000007653267,0.00030869545,0.0000019448637,0.86128455,0.00001682774,0.017045692,0.01623728],"study_design_scores_gemma":[0.00739843,0.0003643496,0.5789523,0.00028094306,0.00017040198,0.000029107128,0.000043640866,0.0013338318,0.37372732,0.0000138308715,0.03724066,0.00044518796],"about_ca_topic_score_codex":0.0003229932,"about_ca_topic_score_gemma":0.000058899917,"teacher_disagreement_score":0.48755723,"about_ca_system_score_codex":0.000045760244,"about_ca_system_score_gemma":0.00008382633,"threshold_uncertainty_score":0.9999958},"labels":[],"label_agreement":null},{"id":"W2070199109","doi":"10.1097/00043426-200309000-00011","title":"Voriconazole Treatment of Presumptive Disseminated Aspergillus Infection in a Child With Acute Leukemia","year":2003,"lang":"en","type":"article","venue":"Journal of Pediatric Hematology/Oncology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Voriconazole; Medicine; Amphotericin B; Chemotherapy; Aspergillosis; Leukemia; Aspergillus; Lung; Mycosis; Intensive care medicine; Internal medicine; Surgery; Immunology; Antifungal; Dermatology; Microbiology","score_opus":0.013892176572370674,"score_gpt":0.313733470930994,"score_spread":0.29984129435862333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070199109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99256516,0.0020620343,0.00020379788,0.000244165,0.00020565982,0.00032341978,0.000004173443,0.000009588782,0.0043819794],"genre_scores_gemma":[0.9943224,0.00452965,0.000801814,0.000029156152,0.00013440322,0.000010916278,0.0000034140687,0.0000145532185,0.00015369429],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981158,0.0002464832,0.00089541246,0.00021578764,0.00022182084,0.0003047372],"domain_scores_gemma":[0.9982254,0.0003118157,0.00078529434,0.00018530067,0.0003261705,0.00016602995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004342746,0.00020103202,0.0011484151,0.00042597443,0.000043554315,0.0000029407233,0.00006312294,0.00032617047,0.000084144915],"category_scores_gemma":[0.00030645356,0.0001341249,0.00018987541,0.00052759156,0.00013649376,0.000106201594,0.000010356701,0.0003743776,0.0000066754183],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029592735,0.0018419138,0.98720694,0.00010418732,0.00037286387,0.0040947073,0.00087728805,0.000022861354,0.0004981752,0.0004721972,0.00035077918,0.0011988273],"study_design_scores_gemma":[0.014693575,0.020304246,0.9276154,0.00011542537,0.0020797574,0.020873502,0.0008596446,0.00003666702,0.009882445,0.0002546481,0.0030104571,0.00027425363],"about_ca_topic_score_codex":0.000054135486,"about_ca_topic_score_gemma":0.00018207816,"teacher_disagreement_score":0.059591547,"about_ca_system_score_codex":0.0011432021,"about_ca_system_score_gemma":0.0014546516,"threshold_uncertainty_score":0.5469455},"labels":[],"label_agreement":null},{"id":"W2070265193","doi":"10.1371/journal.pbio.0050064","title":"Als3 Is a Candida albicans Invasin That Binds to Cadherins and Induces Endocytosis by Host Cells","year":2007,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":623,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"American Heart Association; National Center for Research Resources; National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; NIH Clinical Center; National Institutes of Health","keywords":"Endocytosis; Candida albicans; Cadherin; Biology; Corpus albicans; Microbiology; Cell biology; Umbilical vein; Cell; In vitro; Biochemistry","score_opus":0.03413968877101791,"score_gpt":0.2963728106414404,"score_spread":0.26223312187042247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070265193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994298,0.00058513624,0.000055333603,0.0018708732,0.00007892856,0.0003227687,0.00013168514,0.000035611734,0.002621678],"genre_scores_gemma":[0.9937822,0.00032846435,0.00020715807,0.0041809482,0.00007797172,0.000011786461,0.000027767237,0.000015510437,0.0013681804],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876106,0.000042605046,0.0002184563,0.0004299278,0.00011604207,0.0004319354],"domain_scores_gemma":[0.99916077,0.00017566676,0.00005311191,0.00027517692,0.00005042594,0.00028485456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022826843,0.00017070842,0.00038684742,0.00009488547,0.00007410529,0.000010618742,0.00009494304,0.00019966737,0.0004047448],"category_scores_gemma":[0.000109069726,0.00013311849,0.000053029973,0.00017147933,0.00018520476,0.00003451616,0.00006395958,0.00018767742,0.00006181262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026816482,0.00010042954,0.30142033,0.000029873037,0.000059991013,0.000016382844,0.0004976318,4.144398e-9,0.6923629,0.000020224034,0.0037822733,0.0014417673],"study_design_scores_gemma":[0.00064762885,0.0008713159,0.16502146,0.00004383744,0.00006988346,0.00001090646,0.00062301185,0.0000015218066,0.8027369,0.000023963516,0.029757556,0.00019202908],"about_ca_topic_score_codex":0.0011582512,"about_ca_topic_score_gemma":0.0019710627,"teacher_disagreement_score":0.13639888,"about_ca_system_score_codex":0.00007058725,"about_ca_system_score_gemma":0.00007130003,"threshold_uncertainty_score":0.54284143},"labels":[],"label_agreement":null},{"id":"W2070375589","doi":"10.1016/j.fgb.2011.10.006","title":"Prevalence of specific and phylogenetically closely related genotypes in the population of Candida albicans associated with genital candidiasis in China","year":2011,"lang":"en","type":"article","venue":"Fungal Genetics and Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Natural Science Foundation of China; Department of Science and Technology, Ministry of Science and Technology, India; University of Aberdeen","keywords":"Multilocus sequence typing; Biology; Candida albicans; Genotype; Corpus albicans; Clade; Microbiology; Typing; Genitourinary system; Genetics; Phylogenetics; Gene","score_opus":0.026176830074498076,"score_gpt":0.2503456838593033,"score_spread":0.2241688537848052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070375589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99638706,0.0029467393,0.0000048697216,0.00003225051,0.0000144677415,0.00023721192,0.00003885138,0.0000021825506,0.00033636115],"genre_scores_gemma":[0.99828213,0.0014593634,0.0001925213,0.000014916389,0.0000073681135,0.0000044933486,0.000014346428,0.000004977035,0.000019899959],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992367,0.000090070826,0.00027650167,0.00018603532,0.0000676334,0.00014302689],"domain_scores_gemma":[0.99964553,0.000062416075,0.00008958006,0.00012723563,0.00004315227,0.000032098582],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026429017,0.00008745223,0.00023107346,0.00006170002,0.000017906415,0.0000019925528,0.00005228347,0.00011681423,0.000030228139],"category_scores_gemma":[0.000053917644,0.000054374912,0.00001986413,0.00015323453,0.0002453535,0.000009888188,0.000018365403,0.00011050764,1.2410605e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031221774,0.00010541429,0.98684007,0.000052094612,0.000021832122,0.000006036723,0.0009816706,7.652474e-7,0.009805516,0.00033047018,0.0000011807734,0.0015427223],"study_design_scores_gemma":[0.00060327747,0.000992322,0.9968684,0.000049780512,0.00004205396,0.000008253468,0.000104006256,0.000038344737,0.0007354438,0.0004945387,0.0000036064769,0.000059998027],"about_ca_topic_score_codex":0.0006515352,"about_ca_topic_score_gemma":0.0022540414,"teacher_disagreement_score":0.010028296,"about_ca_system_score_codex":0.000013029502,"about_ca_system_score_gemma":0.000036209756,"threshold_uncertainty_score":0.22173446},"labels":[],"label_agreement":null},{"id":"W2070726414","doi":"10.1136/adc.2005.082024","title":"Invasive fungal infection in very low birthweight infants: national prospective surveillance study","year":2005,"lang":"en","type":"article","venue":"Archives of Disease in Childhood Fetal & Neonatal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":103,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Pfizer UK; Hospital for Sick Children","keywords":"Incidence (geometry); Medicine; Low birth weight; Epidemiology; Pediatrics; Prospective cohort study; Confidence interval; Pregnancy; Biology; Internal medicine","score_opus":0.006237596786266303,"score_gpt":0.25578506050509425,"score_spread":0.24954746371882794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070726414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99636334,0.00052645727,0.000017048256,0.0001423341,0.00005745655,0.0012267517,0.00016990522,0.000036879188,0.0014598338],"genre_scores_gemma":[0.99926126,0.00013171155,0.00011265815,0.00008878202,0.0001693761,0.00006602728,0.000100113495,0.000023133822,0.000046919668],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977985,0.00014460746,0.00056011905,0.00056477793,0.0006029366,0.00032907815],"domain_scores_gemma":[0.9989274,0.00036138168,0.00013092098,0.00029758224,0.00008024478,0.0002024728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022925893,0.0002516329,0.00044049727,0.00040503897,0.000059258506,0.000013695254,0.00013305663,0.000050029415,0.000045577006],"category_scores_gemma":[0.00074693345,0.00023703481,0.00018854327,0.00042234288,0.00023286838,0.0004186172,0.00008765066,0.0003954559,0.000017837088],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031043156,0.0038415967,0.98511255,0.00012838872,0.00007790161,0.00010172812,0.0022376908,0.00021218101,0.00014570604,0.00017735182,0.000005952843,0.004854649],"study_design_scores_gemma":[0.0050181216,0.00041691907,0.9919375,0.00033229103,0.000019619807,0.0000065731983,0.00028551248,0.00023600021,0.0003420436,0.0011827296,0.000010608304,0.00021206554],"about_ca_topic_score_codex":0.00021160461,"about_ca_topic_score_gemma":0.0048565627,"teacher_disagreement_score":0.006824977,"about_ca_system_score_codex":0.00013155771,"about_ca_system_score_gemma":0.00062074634,"threshold_uncertainty_score":0.9665999},"labels":[],"label_agreement":null},{"id":"W2070920389","doi":"10.1007/s12281-013-0168-4","title":"Invasive Fungal Infections in the Child with Chronic Granulomatous Disease","year":2014,"lang":"en","type":"article","venue":"Current Fungal Infection Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Chronic granulomatous disease; Medicine; Fungal disease; Disease; Intensive care medicine; Dermatology; Immunology; Pathology","score_opus":0.012947570720396442,"score_gpt":0.2758059167773581,"score_spread":0.2628583460569617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070920389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990758,0.0008591341,0.00095623033,0.00049926556,0.00083613925,0.0009916187,0.0000044601975,0.00015166537,0.0049434993],"genre_scores_gemma":[0.9986838,0.00027006294,0.000006165016,0.00016910824,0.0005244398,0.00017401525,0.000061723935,0.000023138025,0.00008755469],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979142,0.00019094489,0.0005055232,0.0005270465,0.0004919999,0.00037027002],"domain_scores_gemma":[0.99847955,0.00014331611,0.00023236714,0.00074471073,0.00017010556,0.00022995922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066267414,0.00026206754,0.00032572148,0.00018743915,0.00033151478,0.0000600203,0.00005503992,0.00007808553,0.000121004814],"category_scores_gemma":[0.00063282467,0.00017057972,0.0001938102,0.000594855,0.00017533128,0.00019431958,0.000029479106,0.00065764005,0.00003775929],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011976099,0.0007301042,0.99247116,0.00030240073,0.000026265232,0.000361196,0.00010229228,0.000098843426,0.000063628555,0.0003394378,0.00090717716,0.004477718],"study_design_scores_gemma":[0.00069167465,0.00050482893,0.9751657,0.00048175422,0.00015364595,0.002074717,0.000022618964,0.00009331117,0.00012970161,0.00023041511,0.020240992,0.00021060854],"about_ca_topic_score_codex":0.00017266713,"about_ca_topic_score_gemma":0.002190067,"teacher_disagreement_score":0.019333815,"about_ca_system_score_codex":0.00022229491,"about_ca_system_score_gemma":0.00038482808,"threshold_uncertainty_score":0.69560385},"labels":[],"label_agreement":null},{"id":"W2071139208","doi":"10.1186/s12879-014-0573-5","title":"Weekly use of fluconazole as prophylaxis in haematological patients at risk for invasive candidiasis","year":2014,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Fluconazole; Incidence (geometry); Candida krusei; Candida albicans; Candida glabrata; Internal medicine; Medicine; Medical microbiology; Drug resistance; Mycosis; Corpus albicans; Biology; Surgery; Microbiology; Antifungal; Immunology","score_opus":0.01867247725902672,"score_gpt":0.2632205964227294,"score_spread":0.24454811916370267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071139208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981946,0.00009760252,0.00017529348,0.000011606274,0.00007664133,0.0010364815,0.00015940653,0.000045062498,0.0002033071],"genre_scores_gemma":[0.9993487,0.000044773828,0.0000868573,0.00011389861,0.00003617837,0.00013512214,0.000077544195,0.00001526339,0.00014166681],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987769,0.00013377679,0.0003302242,0.00031424797,0.00020673231,0.00023811846],"domain_scores_gemma":[0.9982865,0.0008808388,0.00015685048,0.00029263025,0.00021899314,0.0001641965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001051199,0.00015168401,0.0004388476,0.000095411655,0.00009013797,0.000013439883,0.000048497845,0.00010538846,0.000090527625],"category_scores_gemma":[0.006699049,0.00011862263,0.00021459446,0.00014735135,0.00014234829,0.00010788582,0.00004582557,0.00008428911,0.000028430815],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012983747,0.0009103971,0.99546504,0.00050478557,0.00002750388,0.0000037801815,0.000058746118,0.000016595925,0.00009278391,0.00011159491,0.0004036479,0.0011067304],"study_design_scores_gemma":[0.002749173,0.0014350886,0.99341756,0.00008633373,0.00011800477,0.000002410131,0.00003812084,0.000065146065,0.0011349927,0.0005612064,0.00026687578,0.00012509507],"about_ca_topic_score_codex":0.00058742,"about_ca_topic_score_gemma":0.0034072408,"teacher_disagreement_score":0.006593929,"about_ca_system_score_codex":0.0001393723,"about_ca_system_score_gemma":0.0001716943,"threshold_uncertainty_score":0.8019871},"labels":[],"label_agreement":null},{"id":"W2071847689","doi":"10.1128/iai.68.6.3172-3179.2000","title":"Characterization of Binding of <i>Candida albicans</i> to Small Intestinal Mucin and Its Role in Adherence to Mucosal Epithelial Cells","year":2000,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":123,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Mucin; Candida albicans; Biology; Microbiology; Mucin 2; Epithelium; Intestinal mucosa; Immunology; Biochemistry; Internal medicine; Medicine","score_opus":0.017152533705599875,"score_gpt":0.26224786933685895,"score_spread":0.24509533563125907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071847689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990755,0.000013982175,0.000070905764,0.000032514585,0.00003363722,0.00025302958,0.000018599525,0.000009649436,0.0004922024],"genre_scores_gemma":[0.9994548,0.000114800874,0.00005458172,0.000077573466,0.000014193477,0.000005559291,0.000009048769,0.0000046260943,0.00026481933],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994441,0.000045417968,0.00022669579,0.00011851618,0.000068815476,0.00009643882],"domain_scores_gemma":[0.99966574,0.000036261124,0.000047446385,0.00009855651,0.00007467649,0.00007731702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002042671,0.000072918236,0.00019100934,0.00010448015,0.000036401758,0.000005959163,0.000024297939,0.000043732565,0.00017029184],"category_scores_gemma":[0.00010362378,0.000068488145,0.00002055106,0.00024138944,0.00003265666,0.00006210297,0.000021247239,0.000117438605,0.000006896616],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003742422,0.00009607466,0.18021606,0.0000697736,0.0000035245366,5.4374465e-7,0.0005592596,0.0000016601558,0.7996572,0.000009357477,0.0000010834498,0.019011175],"study_design_scores_gemma":[0.00036049323,0.00057783455,0.64758116,0.00014422792,0.000008624087,0.0000037224072,0.00006404586,0.000047800455,0.35098737,0.000006892194,0.0001714916,0.000046358007],"about_ca_topic_score_codex":0.0017689657,"about_ca_topic_score_gemma":0.0008539009,"teacher_disagreement_score":0.4673651,"about_ca_system_score_codex":0.00001857219,"about_ca_system_score_gemma":0.000035523804,"threshold_uncertainty_score":0.27928653},"labels":[],"label_agreement":null},{"id":"W2072259702","doi":"10.1080/1042819031000060573","title":"Acute Myelogenous Leukemia Complicated by Acute Necrotizing Ulcerative Gingivitis Due to Aspergillus terreus","year":2003,"lang":"en","type":"article","venue":"Leukemia & lymphoma/Leukemia and lymphoma","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; BC Cancer Agency","funders":"","keywords":"Aspergillus terreus; Itraconazole; Amphotericin B; Medicine; Leukemia; Chronic myelogenous leukemia; Mortality rate; Internal medicine; Immunology; Dermatology; Chemotherapy; Gastroenterology; Antifungal; Microbiology; Biology","score_opus":0.00975397645633386,"score_gpt":0.2500085407479471,"score_spread":0.24025456429161324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072259702","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97373456,0.0017995368,0.0017351715,0.00046225934,0.000494452,0.0017764041,0.00043329448,0.0005788323,0.018985473],"genre_scores_gemma":[0.9816285,0.0007484627,0.0025206152,0.0051920526,0.00023974187,0.00024236519,0.000435943,0.00024461822,0.008747706],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9926663,0.00035441303,0.0014190916,0.0023324965,0.0010818229,0.0021458967],"domain_scores_gemma":[0.9954163,0.0003478923,0.0004033817,0.0017246287,0.0004292457,0.0016785414],"candidate_categories":["metaepi_narrow"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.00064784073,0.0014134493,0.002169911,0.0004234973,0.0011598935,0.00032594972,0.0005266983,0.00087270647,0.00027338238],"category_scores_gemma":[0.00030213143,0.001332805,0.0005556933,0.00133983,0.00067246,0.0004953158,0.00029608505,0.00042257988,0.00040168033],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008354973,0.0011330671,0.02398522,0.0008123152,0.005449264,0.017621322,0.008721729,0.00012419454,0.60280067,0.0050296374,0.09516034,0.23080726],"study_design_scores_gemma":[0.054549247,0.004385439,0.4132844,0.0016193992,0.00398454,0.03268283,0.0038112707,0.0045885793,0.24201597,0.0017491399,0.23050226,0.0068269353],"about_ca_topic_score_codex":0.0016503765,"about_ca_topic_score_gemma":0.00027604486,"teacher_disagreement_score":0.38929915,"about_ca_system_score_codex":0.015030433,"about_ca_system_score_gemma":0.00507265,"threshold_uncertainty_score":0.99986154},"labels":[],"label_agreement":null},{"id":"W2072337394","doi":"10.1517/14740331003752694","title":"Interactions between antifungal and antiretroviral agents","year":2010,"lang":"en","type":"article","venue":"Expert Opinion on Drug Safety","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Alberta Health Services; University of Alberta","funders":"","keywords":"Fluconazole; Medicine; Intensive care medicine; Drug; Antifungal drug; Antiretroviral therapy; Antifungal; Antifungal drugs; Life expectancy; Amphotericin B; Pharmacology; Human immunodeficiency virus (HIV); Immunology; Viral load; Population; Environmental health","score_opus":0.028559828394123552,"score_gpt":0.3488578652823199,"score_spread":0.3202980368881963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072337394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9813252,0.00020399457,0.00014653296,0.0031855544,0.0016678735,0.00030042444,0.000041350995,0.0001099633,0.013019122],"genre_scores_gemma":[0.99541795,0.0005022731,0.00048211933,0.00066975446,0.00085916894,0.000006478205,0.00009170719,0.00002213558,0.0019483891],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987204,0.000050322935,0.00029978514,0.00039916366,0.00027857118,0.00025175742],"domain_scores_gemma":[0.9990772,0.00014813586,0.000065907414,0.0004231166,0.000064926906,0.00022069407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024943193,0.00018032348,0.0002997418,0.000089717534,0.00021681,0.000026626956,0.00008554295,0.00009272605,0.0006472642],"category_scores_gemma":[0.00018112354,0.00014991655,0.0001123376,0.00011923674,0.00015067655,0.00015632907,0.000054646636,0.0005466202,0.00011154575],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007394383,0.0003136101,0.8770941,0.000040723036,0.00007257944,0.000013899322,0.0009937164,2.2238657e-7,0.02124727,0.0014182451,0.030811604,0.06725457],"study_design_scores_gemma":[0.00081897,0.00015396094,0.7422279,0.000083897314,0.0000048965608,0.000010341079,0.0002457928,0.00006256887,0.0028338318,0.000029715826,0.25337976,0.00014836992],"about_ca_topic_score_codex":0.00006891826,"about_ca_topic_score_gemma":0.000024245437,"teacher_disagreement_score":0.22256814,"about_ca_system_score_codex":0.00004231255,"about_ca_system_score_gemma":0.000057084537,"threshold_uncertainty_score":0.70870894},"labels":[],"label_agreement":null},{"id":"W2073488008","doi":"10.1371/journal.pone.0052871","title":"Clonal Expansion and Emergence of Environmental Multiple-Triazole-Resistant Aspergillus fumigatus Strains Carrying the TR34/L98H Mutations in the cyp51A Gene in India","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":194,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Janssen Pharmaceuticals; Astellas Pharma; Roy J. and Lucille A. Carver College of Medicine, University of Iowa; Radboud Universiteit; Gilead Sciences; Natural Sciences and Engineering Research Council of Canada; Pfizer","keywords":"Aspergillus fumigatus; Azole; Biology; Itraconazole; Posaconazole; Voriconazole; Genotype; Microbiology; Population; Triazole; Veterinary medicine; Gene; Genetics; Antifungal; Medicine; Chemistry","score_opus":0.04408818345110862,"score_gpt":0.2559176673401679,"score_spread":0.21182948388905928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073488008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99686056,0.0020073988,0.0000091484435,0.0002267107,0.000024543933,0.00057613873,0.00008582436,0.0000065045706,0.00020317572],"genre_scores_gemma":[0.99905986,0.0003769045,0.0002818344,0.0001043151,0.00006761628,0.000034878365,0.000033472934,0.000011094233,0.000030026711],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985597,0.0001379454,0.00036575747,0.00018569906,0.00046563262,0.00028524888],"domain_scores_gemma":[0.99933636,0.00021338012,0.00008168225,0.00027801894,0.000015373678,0.00007516512],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005734347,0.00012518858,0.00025009632,0.000069491514,0.00009607198,0.000006127448,0.000101869235,0.000072067676,0.000093087096],"category_scores_gemma":[0.00019584096,0.00007952346,0.000050986644,0.00018351014,0.00021224175,0.00010497088,0.000037158625,0.00027524572,0.0000040980713],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017445754,0.0010395685,0.50902146,0.00005681842,0.000032493597,0.000008783541,0.0055402922,0.0000031900793,0.48365408,0.000056295616,0.000003430825,0.00040913068],"study_design_scores_gemma":[0.00091807253,0.000091975824,0.97203726,0.00010763579,0.00008218124,0.0000029224232,0.007978612,0.00020615803,0.018458577,0.000028979995,0.0000057761335,0.00008184241],"about_ca_topic_score_codex":0.000118138145,"about_ca_topic_score_gemma":0.00032447846,"teacher_disagreement_score":0.4651955,"about_ca_system_score_codex":0.000056467994,"about_ca_system_score_gemma":0.000045313795,"threshold_uncertainty_score":0.32428724},"labels":[],"label_agreement":null},{"id":"W2073539821","doi":"10.1016/j.jinf.2003.08.008","title":"The effect of current management on morbidity and mortality in hospitalised adults with funguria","year":2003,"lang":"en","type":"article","venue":"Journal of Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Asymptomatic; Concomitant; Internal medicine; Clinical endpoint; Multivariate analysis; Retrospective cohort study; Fluconazole; Urinary system; Surgery; Pediatrics; Antifungal; Randomized controlled trial","score_opus":0.010060497681794033,"score_gpt":0.2969404662512165,"score_spread":0.2868799685694225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073539821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981781,0.00032437444,0.00009584439,0.000019755484,0.00019595162,0.00025415816,4.5849782e-7,0.0000024603746,0.00092886726],"genre_scores_gemma":[0.99923414,0.0007012412,0.000012003042,0.0000054464117,0.000029295943,0.0000025646475,3.270531e-7,0.000003439124,0.000011521575],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992397,0.00012225543,0.00025166856,0.0000753093,0.00023129673,0.00007976733],"domain_scores_gemma":[0.99949193,0.000079575606,0.0001968373,0.00011317787,0.00007678258,0.000041684605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009438371,0.00007021469,0.00019083658,0.00005887739,0.00003463037,0.0000069293214,0.000016207769,0.000024695968,0.00000578711],"category_scores_gemma":[0.00015507202,0.000035750294,0.000060488914,0.00011337426,0.00004883745,0.000055975597,0.0000041097683,0.00018045522,4.922753e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016147168,0.000118823715,0.9917813,0.00024511223,0.000050097788,0.0000150353535,0.00004233095,0.000012418943,0.00010490715,0.00013838858,0.00005558502,0.0058212895],"study_design_scores_gemma":[0.0021657026,0.0026220153,0.99154484,0.0004938643,0.00008194955,0.0000143721845,0.000032511423,0.0000100898715,0.0027591945,0.0000593196,0.00018336801,0.000032773507],"about_ca_topic_score_codex":0.000021651207,"about_ca_topic_score_gemma":0.00010947196,"teacher_disagreement_score":0.005788516,"about_ca_system_score_codex":0.00006820547,"about_ca_system_score_gemma":0.000019493467,"threshold_uncertainty_score":0.14578547},"labels":[],"label_agreement":null},{"id":"W2074778519","doi":"10.3899/jrheum.140354","title":"Septic Arthritis and Osteomyelitis of the Hip by <i>Candida albicans</i>","year":2014,"lang":"en","type":"article","venue":"The Journal of Rheumatology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Septic arthritis; Candida albicans; Hemodialysis; Central venous catheter; Osteomyelitis; Surgery; Arthritis; Abscess; Internal medicine; Catheter","score_opus":0.004704109201443483,"score_gpt":0.21868913099006188,"score_spread":0.2139850217886184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074778519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903731,0.0034308166,0.00028142554,0.004976105,0.00013946765,0.000088261564,0.0000042601714,0.000003227627,0.00070334796],"genre_scores_gemma":[0.9967586,0.0025477258,0.000055667235,0.00036823802,0.000013776221,4.930134e-7,3.861145e-7,0.0000076170745,0.0002475081],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988836,0.00026031391,0.0004354384,0.000068849185,0.00019830104,0.00015349717],"domain_scores_gemma":[0.998785,0.00043117764,0.00033408593,0.00025226423,0.00012325826,0.00007422404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077091745,0.00008420671,0.00043177875,0.000026699157,0.00007158135,0.0000040774753,0.00015335051,0.00006493673,0.00009764557],"category_scores_gemma":[0.00042331213,0.000042019583,0.00009675689,0.00007845267,0.00047906596,0.00003616705,0.00003686513,0.00026055303,0.00000307649],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071516866,0.000059736944,0.9126097,0.00018281056,0.00015193719,0.0000049394453,0.0010765563,0.0000014539465,0.017718507,0.0010958964,0.015991075,0.050392244],"study_design_scores_gemma":[0.014753922,0.0046488293,0.8171005,0.004467759,0.0009946148,0.041526884,0.0047088154,0.00020886997,0.021295473,0.010937871,0.078803,0.0005534023],"about_ca_topic_score_codex":0.000141044,"about_ca_topic_score_gemma":0.00012656987,"teacher_disagreement_score":0.09550912,"about_ca_system_score_codex":0.00001459671,"about_ca_system_score_gemma":0.00007732691,"threshold_uncertainty_score":0.17651385},"labels":[],"label_agreement":null},{"id":"W2075116821","doi":"10.1111/petr.12320","title":"Cutaneous squamous cell carcinoma in two pediatric lung transplant patients on prolonged voriconazole treatment","year":2014,"lang":"en","type":"article","venue":"Pediatric Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Voriconazole; Lung; Basal cell; Carcinoma; Squamous-cell carcinoma of the lung; Dermatology; Oncology; Internal medicine; Antifungal","score_opus":0.00791874149850417,"score_gpt":0.2469306237065463,"score_spread":0.23901188220804215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075116821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962922,0.00024757854,0.0002830583,0.000053529333,0.00022551672,0.0010015881,0.00010611705,0.00008195789,0.0017084859],"genre_scores_gemma":[0.99714977,0.0015353654,0.000073645635,0.00009112872,0.00048348866,0.00007024742,0.00043899834,0.000036334684,0.000121019126],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99792033,0.00013764993,0.0005265808,0.0004909893,0.00046404163,0.0004603897],"domain_scores_gemma":[0.9990374,0.00029574122,0.00012512696,0.00027886085,0.00007508102,0.00018779373],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016550662,0.000323634,0.00040538452,0.00036308673,0.00009648985,0.000016533124,0.00009048806,0.00012132532,0.000042755757],"category_scores_gemma":[0.000025005751,0.00027565347,0.00014969143,0.00042211058,0.00001989506,0.00009359155,0.000002900091,0.00023384803,0.00007046729],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020898404,0.0012322232,0.9932387,0.0008107343,0.0000037233126,0.00014317289,0.0014766607,0.00018692594,0.00007749652,0.000019707248,0.000030239078,0.0006906152],"study_design_scores_gemma":[0.008745107,0.0015023864,0.9870232,0.000010172061,0.0007479929,0.000022350878,0.0000165475,0.0007522716,0.00088357937,0.000017128465,0.00001502266,0.00026424084],"about_ca_topic_score_codex":0.00027183254,"about_ca_topic_score_gemma":0.00039335035,"teacher_disagreement_score":0.006655267,"about_ca_system_score_codex":0.00025515197,"about_ca_system_score_gemma":0.00012445166,"threshold_uncertainty_score":0.99996954},"labels":[],"label_agreement":null},{"id":"W2075327865","doi":"10.1007/s00134-014-3352-2","title":"Candida in the respiratory tract secretions of critically ill patients and the impact of antifungal treatment: a randomized placebo controlled pilot trial (CANTREAT study)","year":2014,"lang":"en","type":"article","venue":"Intensive Care Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Clinical Evaluation Research Unit; Toronto General Hospital; University of Toronto; University Health Network; Université de Montréal; Université Laval; Ottawa Hospital; Centre hospitalier universitaire de Québec; Kingston General Hospital; Hôpital du Sacré-Cœur de Montréal","funders":"Physicians' Services Incorporated Foundation; Pfizer","keywords":"Medicine; Randomized controlled trial; Placebo; Observational study; Pneumonia; Ventilator-associated pneumonia; Internal medicine; Clinical trial; Intensive care; Intensive care medicine; Pathology","score_opus":0.022973105873181632,"score_gpt":0.3320520986290145,"score_spread":0.3090789927558329,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075327865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882097,0.0014792528,0.000030905587,0.0014425062,0.00013427947,0.0073184394,0.00004214769,0.000008993589,0.0013337313],"genre_scores_gemma":[0.99772614,0.000111726484,0.0000030618348,0.0017460057,0.00014195201,0.00019739113,0.00002552347,0.000014664807,0.00003355447],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9961668,0.0017701628,0.001012255,0.000297302,0.0005107347,0.00024271187],"domain_scores_gemma":[0.98586106,0.006736629,0.00030828777,0.00050063425,0.0064808247,0.00011253906],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.002065796,0.00027938606,0.0024258727,0.00016350953,0.00007770848,0.0000071342033,0.00012058487,0.000070626695,0.000062124804],"category_scores_gemma":[0.05451875,0.00010561539,0.0004032905,0.00020745714,0.0017738185,0.000035149114,0.000019792484,0.00024122703,7.1800065e-7],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.8899585,0.0007548821,0.09643341,0.00005151293,0.000409093,0.000023121984,0.0110116005,9.2015205e-7,0.00043437735,0.00011066192,0.00033279858,0.00047910522],"study_design_scores_gemma":[0.81394345,0.019819444,0.13312571,0.0002611965,0.0012205272,0.0000047443014,0.03136067,0.00007142063,0.00003924061,0.00006720571,0.000010758364,0.000075637676],"about_ca_topic_score_codex":0.0035456421,"about_ca_topic_score_gemma":0.00067853084,"teacher_disagreement_score":0.07601507,"about_ca_system_score_codex":0.00012499528,"about_ca_system_score_gemma":0.00020977003,"threshold_uncertainty_score":0.95344543},"labels":[],"label_agreement":null},{"id":"W2075584350","doi":"10.1128/iai.73.8.4571-4580.2005","title":"Virulence of the Fungal Pathogen <i>Candida albicans</i> Requires the Five Isoforms of Protein Mannosyltransferases","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Virulence; Candida albicans; Biology; Mutant; Microbiology; Corpus albicans; Gene isoform; Phenotype; Fungal protein; Virulence factor; Gene; Pathogen; Genetics","score_opus":0.009694942676982536,"score_gpt":0.24758246704093018,"score_spread":0.23788752436394764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075584350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99635816,0.0003199719,0.000111325375,0.00050895085,0.000041863183,0.0004093667,0.00002798771,0.000013161235,0.002209207],"genre_scores_gemma":[0.998935,0.00026541256,0.000020275933,0.000197308,0.000033413224,0.000012237298,0.0000028124618,0.000004890198,0.0005286889],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99926794,0.0001182935,0.00024602065,0.00009510468,0.00016402318,0.00010861425],"domain_scores_gemma":[0.99935895,0.00006890476,0.0000869413,0.0003412207,0.00011347807,0.000030492301],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003468601,0.00008644612,0.00017124997,0.000023845174,0.00018776214,0.000006426839,0.000075563614,0.000053923854,0.00009791569],"category_scores_gemma":[0.00016553502,0.000044014578,0.00010294494,0.0001278064,0.00038546036,0.00010426714,0.00003338821,0.00022131091,0.0000018665158],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059456896,0.0003809988,0.46645454,0.000272363,0.00006756023,7.678497e-7,0.0013429027,0.000008437178,0.5026983,0.0010055349,0.000118608645,0.02705545],"study_design_scores_gemma":[0.00044687116,0.00027123556,0.85994494,0.00016450498,0.0000454463,0.000012243409,0.00033431736,0.000029574281,0.13591383,0.0001572419,0.0026239662,0.00005585126],"about_ca_topic_score_codex":0.0015315826,"about_ca_topic_score_gemma":0.0008247568,"teacher_disagreement_score":0.3934904,"about_ca_system_score_codex":0.000023463808,"about_ca_system_score_gemma":0.00006819122,"threshold_uncertainty_score":0.23153049},"labels":[],"label_agreement":null},{"id":"W2075824039","doi":"10.1016/s1087-1845(02)00520-0","title":"The two isoforms of the cAMP-dependent protein kinase catalytic subunit are involved in the control of dimorphism in the human fungal pathogen Candida albicans","year":2003,"lang":"en","type":"article","venue":"Fungal Genetics and Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Medical Research Council; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Universidad de Buenos Aires; Agencia Nacional de Promoción Científica y Tecnológica; Consejo Nacional de Investigaciones Científicas y Técnicas; Medical Research Council Canada; Burroughs Wellcome Fund","keywords":"Biology; Candida albicans; Mutant; Protein kinase A; Protein subunit; Germ tube; Wild type; Gene isoform; Gene; Kinase; Molecular biology; Biochemistry; Microbiology","score_opus":0.02498716927918775,"score_gpt":0.27728532418345736,"score_spread":0.2522981549042696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075824039","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943619,0.003073135,0.000016389378,0.0008427241,0.000056417884,0.0012080042,0.0001177208,0.0000025512911,0.00032117218],"genre_scores_gemma":[0.99919593,0.00016608778,0.000008194533,0.00037271803,0.000041153267,0.000083233965,0.000012635603,0.000008905138,0.00011115844],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99814427,0.0005972582,0.000473842,0.00024214512,0.00020413451,0.00033832953],"domain_scores_gemma":[0.9987605,0.00026655442,0.0002104064,0.0006269946,0.000093430994,0.00004211199],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015013737,0.00017118761,0.00034816746,0.00004227319,0.00018146486,0.000012818704,0.00036184254,0.00012030766,0.00001579477],"category_scores_gemma":[0.0002458852,0.000066684566,0.00009990978,0.0002243565,0.0006098949,0.0000118462785,0.00004933904,0.00037461903,8.3761444e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014924636,0.00016670079,0.90826637,0.000047500584,0.000030282608,0.000015480182,0.001003761,0.0000041593694,0.08676828,0.0030737952,0.000025855446,0.00044859282],"study_design_scores_gemma":[0.002216492,0.00058273517,0.982506,0.00007276636,0.000082946644,0.000020775577,0.0044772406,0.000050332266,0.0063007483,0.0022106657,0.001354847,0.00012445949],"about_ca_topic_score_codex":0.00080224057,"about_ca_topic_score_gemma":0.021771427,"teacher_disagreement_score":0.08046753,"about_ca_system_score_codex":0.00003300028,"about_ca_system_score_gemma":0.00014787223,"threshold_uncertainty_score":0.99607867},"labels":[],"label_agreement":null},{"id":"W2076049954","doi":"10.1136/ejhpharm-2013-000408","title":"Economic impact of antifungal treatment in IFD by <i>Candida</i> species: anidulafungin administration as a cost-effective alternative for critical care patients","year":2014,"lang":"en","type":"article","venue":"European Journal of Hospital Pharmacy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"PricewaterhouseCoopers (Canada)","funders":"","keywords":"Anidulafungin; Caspofungin; Medicine; Amphotericin B; Intensive care; Formulary; Intensive care medicine; Antifungal; Emergency medicine; Internal medicine; Pharmacology","score_opus":0.014831834631583472,"score_gpt":0.3490028482553859,"score_spread":0.3341710136238024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076049954","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950075,0.00025084266,0.00043818128,0.00010841822,0.0003195707,0.0011492256,0.00025530215,0.0000056606777,0.0024653026],"genre_scores_gemma":[0.9993237,0.00007839743,0.000117992204,0.000044245055,0.00029180592,0.000009769295,0.00004779382,0.000029886707,0.00005638138],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99848324,0.00026054087,0.00060358335,0.00022086017,0.00019631266,0.0002354749],"domain_scores_gemma":[0.9987355,0.00025169845,0.0003223768,0.0001342019,0.00033920546,0.00021700558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037986174,0.0002076961,0.0004687388,0.00009623179,0.000039996918,0.000026179872,0.00011456651,0.000017228514,0.00008182191],"category_scores_gemma":[0.00037772767,0.00015874748,0.00037178895,0.00005517053,0.000108971624,0.00023756087,0.000016953929,0.00016615252,0.000014305493],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008056215,0.001976644,0.95161366,0.00016851093,0.0003221305,0.00016939174,0.0025270209,0.00006236636,0.0076293647,0.00009173651,0.00247371,0.024909258],"study_design_scores_gemma":[0.022141567,0.061116315,0.85310763,0.00036596463,0.0003319164,0.00002739352,0.00088632636,0.0003714377,0.056321554,0.00006331616,0.0049066246,0.00035994683],"about_ca_topic_score_codex":0.000039960873,"about_ca_topic_score_gemma":0.000007396927,"teacher_disagreement_score":0.09850601,"about_ca_system_score_codex":0.00074685155,"about_ca_system_score_gemma":0.00024754906,"threshold_uncertainty_score":0.6473535},"labels":[],"label_agreement":null},{"id":"W2076076588","doi":"10.1001/jama.2011.1977","title":"Pulmonary Infection After TB","year":2012,"lang":"en","type":"article","venue":"JAMA","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Pulmonary tuberculosis; Tuberculosis; Pulmonary infection; Intensive care medicine; Pulmonary medicine; Internal medicine; Pathology","score_opus":0.015582422725769247,"score_gpt":0.28032603644493087,"score_spread":0.2647436137191616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076076588","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95778614,0.0006075873,0.00009801884,0.00048165966,0.00016513994,0.000083582716,0.0000013829859,0.000038726725,0.040737752],"genre_scores_gemma":[0.99455714,0.000037313857,0.000097185766,0.0006298798,0.00060954574,0.000010672304,0.0000045473166,0.0000066498164,0.0040470758],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995628,0.000016059914,0.00007891425,0.000079714984,0.000105852385,0.00015663341],"domain_scores_gemma":[0.9996865,0.000014865061,0.000014294592,0.00015679284,0.00003618647,0.00009140997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014761873,0.000050380273,0.00008266773,0.000022908096,0.00002286398,0.0000061164897,0.0000122534675,0.0000653101,0.00066571974],"category_scores_gemma":[0.00008159122,0.000039106548,0.000054680626,0.00006583239,0.000025441452,0.00016741683,0.00001213633,0.00010481939,0.00045041367],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021539327,0.00012054291,0.96948797,0.000041744803,0.0000067023952,0.000014309815,0.00007201165,2.2996604e-8,0.0021772117,0.00006102688,0.0015211756,0.026281891],"study_design_scores_gemma":[0.00018075912,0.000029640916,0.9552467,0.000023235334,0.000018552639,0.000027981725,0.000018480585,0.000010848159,0.000929808,0.00004270314,0.043429848,0.000041460495],"about_ca_topic_score_codex":0.000036024732,"about_ca_topic_score_gemma":0.000007900327,"teacher_disagreement_score":0.041908674,"about_ca_system_score_codex":0.00003716265,"about_ca_system_score_gemma":0.00001426456,"threshold_uncertainty_score":0.72891647},"labels":[],"label_agreement":null},{"id":"W2076308802","doi":"10.1128/aac.00926-08","title":"Relative Contributions of the <i>Candida albicans</i> ABC Transporters Cdr1p and Cdr2p to Clinical Azole Resistance","year":2009,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":126,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Institute for Research in Immunology and Cancer","funders":"Canadian Institutes of Health Research","keywords":"Azole; Candida albicans; ATP-binding cassette transporter; Biology; Ketoconazole; Corpus albicans; Itraconazole; Microbiology; Gene; Fluconazole; Heterologous expression; Drug resistance; Genetics; Transporter; Antifungal; Recombinant DNA","score_opus":0.01210336530590646,"score_gpt":0.3104350919834911,"score_spread":0.2983317266775847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076308802","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97051245,0.000090508685,0.0003816087,0.027475586,0.000072484465,0.00043942782,0.00008447636,0.0000144113965,0.0009290546],"genre_scores_gemma":[0.9726283,0.001023757,0.00028470083,0.024360385,0.0000592587,0.000001458237,0.000008235507,0.000008986044,0.0016249187],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99894816,0.00004116197,0.00037906555,0.0002959534,0.00013241183,0.000203226],"domain_scores_gemma":[0.9993815,0.000044739234,0.00009728095,0.00025214674,0.000088219975,0.0001361357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021906012,0.00014056823,0.0003729585,0.000023742383,0.00014243998,0.00001221806,0.00007992954,0.000102445556,0.000048125785],"category_scores_gemma":[0.0000355131,0.00009623978,0.00014108821,0.00015690202,0.00027804347,0.000057929985,0.000009699281,0.0001718233,0.0000015340609],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003444562,0.00081620447,0.84484345,0.00011478792,0.00025674375,0.000018238487,0.0018844154,7.809922e-7,0.05778406,0.0009841715,0.07807542,0.011777205],"study_design_scores_gemma":[0.0022359474,0.00019257444,0.9510523,0.00020751193,0.00007093581,0.0000041823473,0.00005361892,0.0000029822006,0.007092698,0.0002129657,0.0387599,0.00011437925],"about_ca_topic_score_codex":0.000022381368,"about_ca_topic_score_gemma":0.00006723844,"teacher_disagreement_score":0.10620889,"about_ca_system_score_codex":0.000020071835,"about_ca_system_score_gemma":0.00005918903,"threshold_uncertainty_score":0.39245445},"labels":[],"label_agreement":null},{"id":"W2076453144","doi":"10.1002/jps.20801","title":"Assessing the antifungal activity, pharmacokinetics, and tissue distribution of amphotericin B following the administration of Abelcet® and AmBisome® in combination with caspofungin to rats infected with Aspergillus fumigatus","year":2006,"lang":"en","type":"article","venue":"Journal of Pharmaceutical Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Caspofungin; Aspergillus fumigatus; Pharmacokinetics; Amphotericin B; Aspergillosis; Pharmacology; Distribution (mathematics); Biology; Microbiology; Antifungal; Immunology","score_opus":0.027862306640124616,"score_gpt":0.3766340962459163,"score_spread":0.3487717896057917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076453144","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99598014,0.00031164227,0.0012322563,0.0021030915,0.00004608683,0.0002528598,0.0000035202759,0.0000026751734,0.0000677181],"genre_scores_gemma":[0.99966216,0.000051068826,0.00020170338,0.000044380184,0.000029212337,0.0000011200539,0.0000012786791,0.000003308011,0.0000057847456],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987436,0.0001339731,0.0003170013,0.00013113648,0.00051716546,0.00015712473],"domain_scores_gemma":[0.999219,0.00026027535,0.00022675899,0.00006007215,0.00015942153,0.000074470554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012100667,0.00009478027,0.00024785803,0.00006732854,0.00011660044,0.00005975507,0.000076236254,0.000029734709,0.000004846097],"category_scores_gemma":[0.000111696645,0.000045264802,0.000027153059,0.0005710633,0.00051402976,0.0003099599,0.0000228059,0.0002038071,5.8311034e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009151266,0.00026107152,0.499622,0.000067221496,0.000023722696,0.000039533432,0.00013183203,0.00007680133,0.49293408,0.0001204103,0.000013772925,0.0057944334],"study_design_scores_gemma":[0.0009963594,0.0010643975,0.7832046,0.00018902868,0.00010755144,0.00008566568,0.00023529222,0.001080704,0.21291554,0.00004035727,0.000031579166,0.000048930306],"about_ca_topic_score_codex":0.000080400074,"about_ca_topic_score_gemma":0.00012629379,"teacher_disagreement_score":0.2835826,"about_ca_system_score_codex":0.00003672572,"about_ca_system_score_gemma":0.00016286643,"threshold_uncertainty_score":0.1893964},"labels":[],"label_agreement":null},{"id":"W2076583650","doi":"10.1371/journal.pone.0043956","title":"A Novel Role for the Transcription Factor Cwt1p as a Negative Regulator of Nitrosative Stress in Candida albicans","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; Université de Montréal; McGill University; Institute for Research in Immunology and Cancer","funders":"Canadian Institutes of Health Research; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Regulon; Candida albicans; Regulator; Biology; Transcriptional regulation; Transcriptome; Transcription factor; Corpus albicans; Regulation of gene expression; Psychological repression; Gene; Cell biology; Gene expression; Genetics","score_opus":0.0581857497073258,"score_gpt":0.2790242524010293,"score_spread":0.2208385026937035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076583650","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968014,0.00037942952,0.0005591346,0.00046649206,0.000020616682,0.0010558774,0.00030356177,0.000012020985,0.0004014657],"genre_scores_gemma":[0.9982172,0.000026901564,0.00076225813,0.000095981704,0.00009501462,0.00010201445,0.000015964508,0.000013614556,0.0006710194],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990814,0.000028906226,0.00022265466,0.00014630516,0.00028077472,0.00023996853],"domain_scores_gemma":[0.9992104,0.00026698655,0.00008132496,0.00021206727,0.00014478098,0.00008442426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016045924,0.00010582016,0.0003083743,0.000043682743,0.000045417248,0.00000444718,0.00006384763,0.00006799073,0.00013234597],"category_scores_gemma":[0.00036649112,0.00007203464,0.00008375997,0.000135362,0.00011776575,0.00011162358,0.000008337073,0.00013665612,0.0000036044505],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013780579,0.0023717352,0.23495963,0.00022793477,0.00023847511,2.8092265e-7,0.009776831,6.224654e-7,0.7500906,0.00041457932,0.0000134677075,0.00052779017],"study_design_scores_gemma":[0.0015185727,0.00028222508,0.59932774,0.00028119676,0.00019048114,3.6857006e-7,0.0038599907,0.00017010089,0.3941099,0.00015708493,0.000026938746,0.0000753662],"about_ca_topic_score_codex":0.0008574374,"about_ca_topic_score_gemma":0.0014800809,"teacher_disagreement_score":0.3643681,"about_ca_system_score_codex":0.000096035044,"about_ca_system_score_gemma":0.00009265523,"threshold_uncertainty_score":0.29374877},"labels":[],"label_agreement":null},{"id":"W2077288136","doi":"10.1155/2012/476719","title":"Gastrointestinal Mucormycosis following a<i>Streptococcus pyogenes</i>Toxic Shock Syndrome in a Previously Healthy Patient: A Case Report","year":2012,"lang":"en","type":"article","venue":"Case Reports in Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; Université de Sherbrooke","funders":"","keywords":"Mucormycosis; Streptococcus pyogenes; Toxic shock syndrome; Medicine; Rhizopus; Rhizopus oryzae; Pathogen; Shock (circulatory); Microbiology; Zygomycosis; Streptococcus; Septic shock; Antifungal; Dermatology; Immunology; Internal medicine; Pathology; Amphotericin B; Sepsis; Biology; Bacteria; Staphylococcus aureus","score_opus":0.014092977384205282,"score_gpt":0.2890632074100606,"score_spread":0.2749702300258553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077288136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99285036,0.0035883717,0.00006128556,0.000037013862,0.0004969877,0.0020210438,0.0000192369,0.00022714489,0.0006985432],"genre_scores_gemma":[0.9988357,0.000035764013,0.000120035475,0.00020471954,0.0001151666,0.0005062585,0.000055585333,0.000065572094,0.000061188664],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9956432,0.00018781067,0.0016953794,0.0008671629,0.000484982,0.0011214953],"domain_scores_gemma":[0.9970574,0.00022778456,0.0005461065,0.0010966168,0.00013855842,0.0009335384],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008519121,0.00045270947,0.0008887392,0.00043646063,0.00020639192,0.00004014048,0.00003591385,0.00011636205,0.00012194018],"category_scores_gemma":[0.0027256145,0.00043406576,0.00048524965,0.0007955385,0.00011942321,0.0003905377,0.00009385771,0.00044289188,0.000011699406],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009373813,0.0011221761,0.50116086,0.00024775614,0.000024283197,0.4962868,0.00011542297,0.0000121572275,0.000032616856,0.0000024825065,0.00005922621,0.00084248814],"study_design_scores_gemma":[0.0007264013,0.00054964406,0.27603263,0.00061792263,0.00017811278,0.72110665,0.0003551095,0.000018190522,0.000032188043,0.000044308686,0.00006844985,0.00027038337],"about_ca_topic_score_codex":0.0013329444,"about_ca_topic_score_gemma":0.0018688604,"teacher_disagreement_score":0.22512823,"about_ca_system_score_codex":0.00094117876,"about_ca_system_score_gemma":0.00065384695,"threshold_uncertainty_score":0.9998111},"labels":[],"label_agreement":null},{"id":"W2077328778","doi":"10.1097/01.tp.0000085653.11565.52","title":"Efficacy and safety of itraconazole prophylaxis for fungal infections after orthotopic liver transplantation: a prospective, randomized, double-blind study","year":2003,"lang":"en","type":"article","venue":"Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Itraconazole; Medicine; Placebo; Adverse effect; Internal medicine; Transplantation; Clinical endpoint; Surgery; Population; Randomized controlled trial; Incidence (geometry); Liver transplantation; Gastroenterology; Antifungal; Dermatology; Pathology","score_opus":0.02013006104339317,"score_gpt":0.2955805779620817,"score_spread":0.27545051691868855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077328778","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9779638,0.0002800771,0.013511496,0.00001984462,0.00006846136,0.006960151,0.000064356704,0.00003431885,0.0010975152],"genre_scores_gemma":[0.9976332,0.0007689683,0.0006077486,0.00001867763,0.00003180303,0.00065593945,0.00005788048,0.000016168475,0.00020960142],"study_design_codex":"randomized_trial","study_design_gemma":"observational","domain_scores_codex":[0.9986792,0.00013200396,0.00047231786,0.0003290784,0.00021919658,0.00016820131],"domain_scores_gemma":[0.99917835,0.000315122,0.00009063974,0.00015138074,0.00018896343,0.00007555508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051281624,0.0001721586,0.00047300695,0.00011784836,0.00011503703,0.000014352592,0.000027161666,0.00009620367,0.000095619245],"category_scores_gemma":[0.000039008366,0.00014108904,0.00014032886,0.0001949905,0.0001385122,0.00015615638,0.0000014228589,0.00014037138,0.0000029840048],"study_design_candidate":"randomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.7453338,0.0012097699,0.24272878,0.0017468785,0.00022083428,0.00005879197,0.006177432,0.00001291822,0.0007368875,0.0012372183,0.000001177549,0.0005355275],"study_design_scores_gemma":[0.44425434,0.0011624449,0.5485732,0.00012223353,0.0011643143,0.00008858325,0.00025292928,0.00002245801,0.0041026575,0.00009106574,0.000017168206,0.00014860634],"about_ca_topic_score_codex":0.000044593173,"about_ca_topic_score_gemma":0.00038325545,"teacher_disagreement_score":0.30584443,"about_ca_system_score_codex":0.000028417164,"about_ca_system_score_gemma":0.00009550873,"threshold_uncertainty_score":0.5753444},"labels":[],"label_agreement":null},{"id":"W2078369153","doi":"10.1371/journal.pone.0049959","title":"A Conserved C-Terminal Domain of the Aspergillus fumigatus Developmental Regulator MedA Is Required for Nuclear Localization, Adhesion and Virulence","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie – Hans-Knöll-Institut; Leibniz-Gemeinschaft; Canadian Institutes of Health Research","keywords":"Nuclear localization sequence; Biology; Virulence; Nuclear transport; Cell biology; Aspergillus fumigatus; Regulator; Genetics; Microbiology; Cell nucleus; Gene","score_opus":0.047538556902121346,"score_gpt":0.24979405238045835,"score_spread":0.202255495478337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078369153","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99825597,0.00035380572,0.000050942173,0.00058380264,0.00002293554,0.0005019735,0.000025314002,0.000017693628,0.00018756695],"genre_scores_gemma":[0.99432075,0.00004651039,0.0046810936,0.00054561143,0.000047007445,0.000009607956,0.000008082055,0.000016294453,0.00032504764],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99906814,0.000036744477,0.00024646567,0.0001636336,0.00029148743,0.0001935262],"domain_scores_gemma":[0.9993526,0.000054228112,0.0000901272,0.00026573832,0.00012584492,0.00011148982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024184902,0.000096670075,0.00024156708,0.000021653266,0.00013506753,0.0000061494056,0.00008867979,0.00007817024,0.00011477743],"category_scores_gemma":[0.00032483574,0.00006890293,0.000051527615,0.00009638696,0.00022486786,0.000097181604,0.00007204589,0.000057946676,0.0000068352656],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011954298,0.0009571315,0.41918963,0.0009134427,0.00015018728,0.0000023987948,0.0027024534,2.7332144e-8,0.57277554,0.0007601084,0.00095816393,0.00039550604],"study_design_scores_gemma":[0.0022616421,0.00032168988,0.5202342,0.0013528051,0.0003338409,0.000027916169,0.0016047929,0.000264368,0.4716429,0.00061577145,0.0011194079,0.00022060248],"about_ca_topic_score_codex":0.000012067072,"about_ca_topic_score_gemma":0.000011358235,"teacher_disagreement_score":0.101132594,"about_ca_system_score_codex":0.00006308323,"about_ca_system_score_gemma":0.00007343549,"threshold_uncertainty_score":0.280978},"labels":[],"label_agreement":null},{"id":"W2078506353","doi":"10.1002/yea.842","title":"Functional characterization of the <i>Candida albicans</i> homologue of secretion‐associated and Ras‐related (Sar1) protein","year":2002,"lang":"en","type":"article","venue":"Yeast","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Candida albicans; Complementation; Golgi apparatus; GTPase; Complementary DNA; Peptide sequence; Saccharomyces cerevisiae; Endoplasmic reticulum; Secretion; Molecular biology; Biochemistry; Gene; Genetics; Mutant","score_opus":0.012469031249064297,"score_gpt":0.19838632237026363,"score_spread":0.18591729112119934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078506353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977549,0.000071926035,0.000071723,0.00049712573,0.00004989858,0.0002908357,0.000062643914,0.0000128410675,0.0011881359],"genre_scores_gemma":[0.99496406,0.000018741179,0.000009393047,0.00006256674,0.000018022707,0.0000064177157,0.00006362082,0.0000064320507,0.004850745],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993534,0.000050965824,0.0002117301,0.00011617019,0.00018226646,0.000085475076],"domain_scores_gemma":[0.9995515,0.000013066981,0.00014075343,0.00014699019,0.00011452401,0.000033203676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001179388,0.00006389342,0.00016660057,0.000025352309,0.000043835953,0.000002563481,0.000033077842,0.000078397454,0.0006308678],"category_scores_gemma":[0.00012618555,0.000045039716,0.00005444193,0.00018674564,0.00016412533,0.00003803936,0.000016773773,0.00009846503,0.0000056749623],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010273264,0.00018354824,0.19166678,0.00007075484,0.0000508224,0.0000017058169,0.00020861225,5.374994e-7,0.8064794,0.0003410617,0.00014550146,0.00074856164],"study_design_scores_gemma":[0.00070027355,0.00008057066,0.98708063,0.0001263882,0.00004025885,0.0000050050853,0.00003794342,0.00018845753,0.011368372,0.000057555408,0.00027248898,0.000042051048],"about_ca_topic_score_codex":0.000024653562,"about_ca_topic_score_gemma":0.000017980443,"teacher_disagreement_score":0.79541385,"about_ca_system_score_codex":0.000024557943,"about_ca_system_score_gemma":0.000029097722,"threshold_uncertainty_score":0.69075596},"labels":[],"label_agreement":null},{"id":"W2078588899","doi":"10.1016/s0378-1119(00)00173-6","title":"Characterization of CaGSP1, the Candida albicans RAN/GSP1 homologue","year":2000,"lang":"en","type":"article","venue":"Gene","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Pfizer Canada; Pfizer","keywords":"Biology; Candida albicans; Saccharomyces cerevisiae; Complementation; Mutant; Yeast; Gene; Corpus albicans; Genetics; Fungal protein; Cell biology","score_opus":0.010652218871205892,"score_gpt":0.24109364389645568,"score_spread":0.23044142502524978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078588899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99545676,0.000110088266,0.00011884799,0.00092001585,0.000046957986,0.00018828314,0.00003929155,0.00001554866,0.0031042364],"genre_scores_gemma":[0.9917645,0.00024475926,0.000047107376,0.0005710622,0.0000808066,0.000006778685,0.000088824556,0.000007073745,0.007189119],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999421,0.000033497305,0.0001617115,0.00012392952,0.00013487533,0.00012497314],"domain_scores_gemma":[0.9995573,0.000022795699,0.00003599682,0.0002922635,0.000048279828,0.00004337599],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013604516,0.000063537045,0.00015573125,0.00001597682,0.00005280007,0.0000035623082,0.00006135081,0.00004638981,0.001931302],"category_scores_gemma":[0.000028855571,0.000040460305,0.000058138918,0.00011280942,0.000093768926,0.000024208013,0.0000067920237,0.00007032625,0.000055760305],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048371512,0.00010996025,0.050807413,0.000048391714,0.000046542697,0.000023498878,0.00081673206,0.000002915047,0.91521525,0.000060935294,0.00047375876,0.03191087],"study_design_scores_gemma":[0.0005510052,0.000109728244,0.8994208,0.000024315388,0.000056948487,0.000015817124,0.000070907314,0.00003784586,0.08482218,0.00004116286,0.014783344,0.00006594282],"about_ca_topic_score_codex":0.00021198702,"about_ca_topic_score_gemma":0.00018936116,"teacher_disagreement_score":0.8486134,"about_ca_system_score_codex":0.00002129437,"about_ca_system_score_gemma":0.00007409828,"threshold_uncertainty_score":0.99898106},"labels":[],"label_agreement":null},{"id":"W2079242559","doi":"10.1128/iai.74.4.2382-2391.2006","title":"CD8<sup>+</sup>T Cells but Not Polymorphonuclear Leukocytes Are Required To Limit Chronic Oral Carriage of<i>Candida albicans</i>in Transgenic Mice Expressing Human Immunodeficiency Virus Type 1","year":2006,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal; McGill University","funders":"","keywords":"Candida albicans; Biology; CD8; Immune system; Immunology; Corpus albicans; Cytotoxic T cell; Virology; Immunodeficiency; Virus; Microbiology; In vitro","score_opus":0.023589585176769096,"score_gpt":0.27390494339857724,"score_spread":0.25031535822180817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079242559","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969243,0.0009788743,0.00007733102,0.000054767435,0.0001294509,0.00035581985,0.000028600787,0.00006302619,0.0013878513],"genre_scores_gemma":[0.9988459,0.00024812465,0.0000597892,0.00011576304,0.0000790599,0.000007796708,0.000023971914,0.000027797758,0.0005918079],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984407,0.00015206334,0.0005097225,0.00032010468,0.0002220888,0.00035536458],"domain_scores_gemma":[0.9991254,0.000083111,0.00013349627,0.000437547,0.00012790265,0.00009251367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000388946,0.00022809725,0.00047875525,0.00019793121,0.000340885,0.000040550924,0.00010099353,0.00015681579,0.00025028456],"category_scores_gemma":[0.00007997785,0.00022068725,0.0001397143,0.0004430626,0.00021929336,0.00019002722,0.000048300706,0.0003799516,0.000021148559],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058990635,0.0003009111,0.033644088,0.00017198734,0.000021485694,0.000005708105,0.00051999517,0.00016985278,0.96357363,0.00002576106,0.00009050993,0.0008861652],"study_design_scores_gemma":[0.0017355945,0.00074117334,0.51237214,0.00035637498,0.00008137866,0.000011347183,0.000572679,0.00018500263,0.48206502,0.000020735428,0.001592228,0.00026630668],"about_ca_topic_score_codex":0.03505159,"about_ca_topic_score_gemma":0.0056344974,"teacher_disagreement_score":0.48150858,"about_ca_system_score_codex":0.00026916977,"about_ca_system_score_gemma":0.00014834428,"threshold_uncertainty_score":0.9713741},"labels":[],"label_agreement":null},{"id":"W2079559855","doi":"10.1073/pnas.0809147105","title":"The <i>Candida albicans pescadillo</i> homolog is required for normal hypha-to-yeast morphogenesis and yeast proliferation","year":2008,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; University of New Brunswick","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Candida albicans; Hypha; Yeast; Microbiology; Morphogenesis; Cell biology; Saccharomyces cerevisiae; Genetics; Gene","score_opus":0.044678650666596764,"score_gpt":0.3060233683862121,"score_spread":0.2613447177196153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079559855","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98679817,0.00016246468,0.0000066503976,0.010582645,0.000016076066,0.0005184309,0.000047065423,0.000007758817,0.001860749],"genre_scores_gemma":[0.99668187,0.00009928375,0.0009709296,0.001019517,0.00009830388,0.000036238187,2.7778123e-7,0.000004217095,0.0010893579],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984985,0.0000048146994,0.0002846475,0.00024213127,0.0007945257,0.00017538875],"domain_scores_gemma":[0.9992106,0.00008941023,0.0001936179,0.000013771559,0.00042749132,0.00006512627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009627389,0.000087310465,0.00016408578,0.00006925203,0.0006030885,0.000016869544,0.0002784507,0.000063806074,0.0000061740047],"category_scores_gemma":[0.0007099961,0.000048757243,0.00007863142,0.00041061055,0.0010879647,0.0002265414,0.000059215534,0.00008301682,9.110365e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006525673,0.00010844202,0.29425564,0.00017413226,0.000050084684,3.8294914e-8,0.0009851363,0.0000082811175,0.6814286,0.012124759,0.008556205,0.0016561146],"study_design_scores_gemma":[0.0005163574,0.00024832797,0.7647362,0.00008518389,0.00003962487,0.000059446345,0.0003759034,0.0005182284,0.22790082,0.0034451787,0.001972498,0.0001022635],"about_ca_topic_score_codex":0.0000069009584,"about_ca_topic_score_gemma":6.294229e-7,"teacher_disagreement_score":0.47048053,"about_ca_system_score_codex":0.00003251388,"about_ca_system_score_gemma":0.00009598418,"threshold_uncertainty_score":0.46385303},"labels":[],"label_agreement":null},{"id":"W2080162677","doi":"10.1007/s12281-009-0005-y","title":"The role of second-generation triazole antifungal agents voriconazole and posaconazole in patients with hematologic malignancies","year":2009,"lang":"en","type":"article","venue":"Current Fungal Infection Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre","funders":"","keywords":"Posaconazole; Voriconazole; Aspergillosis; Zygomycosis; Candida albicans; Aspergillus; Triazole; Pharmacology; Biology; Medicine; Microbiology; Amphotericin B; Antifungal; Immunology; Chemistry","score_opus":0.01413536772356834,"score_gpt":0.2643899743679206,"score_spread":0.2502546066443523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080162677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968863,0.001403188,0.000021723485,0.000044794757,0.00035141665,0.0006054715,0.00000595965,0.000033151464,0.0006479722],"genre_scores_gemma":[0.99958456,0.00014474684,0.000016280039,0.00003433693,0.000056772995,0.000015058109,0.000051024104,0.0000079861375,0.00008926495],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99842286,0.0000650634,0.00060425006,0.00033532627,0.00032998688,0.00024253508],"domain_scores_gemma":[0.998987,0.000038613543,0.00034266044,0.00029409738,0.0002490822,0.000088508496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004070369,0.0001768097,0.0003360779,0.00010097061,0.00015805513,0.000032485183,0.000029531393,0.000082320075,0.000052108302],"category_scores_gemma":[0.00012645696,0.00011711024,0.000075637145,0.00024586814,0.00009455368,0.00017599626,0.000019354888,0.00021157348,0.0000020637603],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024734632,0.0004763737,0.9820122,0.000046329642,0.000017655373,0.0000145992735,0.000059963102,0.000005730899,0.006301385,0.00018880339,0.0002511728,0.010378426],"study_design_scores_gemma":[0.0008953651,0.00043080686,0.9862891,0.00009084478,0.000038550486,0.000047413076,0.00003243822,0.00007932291,0.009973955,0.00021924662,0.0017811037,0.000121859724],"about_ca_topic_score_codex":0.00001980935,"about_ca_topic_score_gemma":0.00012344381,"teacher_disagreement_score":0.010256566,"about_ca_system_score_codex":0.0000671976,"about_ca_system_score_gemma":0.00009502024,"threshold_uncertainty_score":0.4775617},"labels":[],"label_agreement":null},{"id":"W2080747108","doi":"10.3314/jjmm.43.161","title":"Host-Parasite Relation in Invasive Aspergillosis","year":2002,"lang":"en","type":"review","venue":"Nippon Ishinkin Gakkai Zasshi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital","funders":"","keywords":"Aspergillosis; Immunology; Aspergillus fumigatus; Fungus; Hypha; Biology; Microbiology; Chemokine; Aspergillus; Immune system; Medicine","score_opus":0.07417334945962396,"score_gpt":0.3490988484086958,"score_spread":0.27492549894907187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080747108","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015711503,0.97333735,0.000011137065,0.00022894793,0.00038646266,0.0019315534,0.00007753155,0.00014546038,0.022310391],"genre_scores_gemma":[0.006091845,0.98498607,0.00029811688,0.00030572867,0.0003705667,0.00015233627,0.0005345816,0.00014120809,0.007119523],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99516356,0.00047545673,0.0014905902,0.0012253888,0.000911656,0.00073334243],"domain_scores_gemma":[0.99696887,0.0006823249,0.0006009808,0.0012646838,0.00018179948,0.00030132683],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0008483931,0.0008282419,0.0030998697,0.0006254569,0.00012072976,0.00009534903,0.00040857276,0.001136379,0.0014815083],"category_scores_gemma":[0.0013732894,0.0007028187,0.0010725118,0.0012458906,0.00015058347,0.00032905696,0.00011896414,0.0018226097,0.0016669516],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018655567,0.00089637376,0.056237753,0.035572927,0.00049438525,0.0014440754,0.00054556987,9.18025e-7,0.00001654915,0.0006359134,0.016222114,0.8877469],"study_design_scores_gemma":[0.0009734465,0.00027477567,0.03689379,0.03238715,0.0013471008,0.0001496398,0.00004841733,0.000010047931,0.0000072938915,0.00019997689,0.92685705,0.0008513019],"about_ca_topic_score_codex":0.000108267384,"about_ca_topic_score_gemma":0.00061379385,"teacher_disagreement_score":0.91063493,"about_ca_system_score_codex":0.0010988703,"about_ca_system_score_gemma":0.00058099977,"threshold_uncertainty_score":0.9995423},"labels":[],"label_agreement":null},{"id":"W2080970566","doi":"10.1016/j.ijpharm.2012.06.062","title":"Efficacy and toxicity of a tropically stable lipid-based formulation of amphotericin B (iCo-010) in a rat model of invasive candidiasis","year":2012,"lang":"en","type":"article","venue":"International Journal of Pharmaceutics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"British Columbia Institute of Technology; University of British Columbia","funders":"Canadian Institutes of Health Research; University of British Columbia","keywords":"Amphotericin B; Spleen; Toxicity; Creatinine; Candida albicans; Pharmacology; Kidney; Gastroenterology; Medicine; Antifungal; Internal medicine; Biology; Microbiology","score_opus":0.06381364257370495,"score_gpt":0.3651489202125472,"score_spread":0.30133527763884227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080970566","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99468076,0.00025591158,0.0044932575,0.0002048164,0.00012937275,0.00014130847,0.000026321528,0.0000015702193,0.000066658446],"genre_scores_gemma":[0.9970658,0.00025528876,0.0024366332,0.00014366813,0.00007434457,7.5071875e-7,0.000003970468,0.0000068352583,0.000012714651],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985635,0.00004743473,0.0007142804,0.00006714616,0.00048648383,0.00012111491],"domain_scores_gemma":[0.9983712,0.00023304473,0.0005539145,0.0000770413,0.00066224945,0.00010255823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004169695,0.0000859023,0.00034783638,0.00021275345,0.000008510344,0.0000042896386,0.000105285086,0.000054928536,0.000035210658],"category_scores_gemma":[0.00041178486,0.000071809816,0.00009943383,0.00010438521,0.000076656615,0.00020651198,0.000026116497,0.0001619556,1.7345047e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003125847,0.0006254611,0.31617188,0.00014859436,0.000086223365,0.0000041105204,0.0006390242,0.0018712844,0.6759326,0.0000824208,0.000013600933,0.0012989815],"study_design_scores_gemma":[0.004936736,0.0002399771,0.09728577,0.00034359557,0.00011721892,0.000011998,0.00012184216,0.018419234,0.87836134,0.00006888816,0.000034799385,0.00005857124],"about_ca_topic_score_codex":0.00003727989,"about_ca_topic_score_gemma":0.000041875537,"teacher_disagreement_score":0.2188861,"about_ca_system_score_codex":0.00012479561,"about_ca_system_score_gemma":0.00029848432,"threshold_uncertainty_score":0.29283193},"labels":[],"label_agreement":null},{"id":"W2081469279","doi":"10.1007/s12281-014-0207-9","title":"Aspergillosis in Lung Transplant Patients: Focus on Colonization Pre-transplant and Impact on Invasive Disease","year":2014,"lang":"en","type":"article","venue":"Current Fungal Infection Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Aspergillosis; Lung transplantation; Intensive care medicine; Aspergillus; Epidemiology; Risk factor; Colonization; Disease; Transplantation; Medicine; Antifungal; Lung; Immunology; Biology; Internal medicine; Microbiology; Dermatology","score_opus":0.010430584286887779,"score_gpt":0.28615093333910036,"score_spread":0.2757203490522126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081469279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975382,0.00016356981,0.0003176948,0.000107865926,0.0005465291,0.00079443067,0.000039591,0.000065863416,0.0004262758],"genre_scores_gemma":[0.9988624,0.00063123135,0.000002609019,0.000075095624,0.00009541519,0.0000480008,0.00024030042,0.00001913842,0.000025832896],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982751,0.000117989846,0.00047432864,0.0005098555,0.0003710471,0.00025165983],"domain_scores_gemma":[0.99898726,0.00013031025,0.0001754365,0.00030062726,0.00012471786,0.00028165936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029662583,0.00024426237,0.0003234866,0.00020277392,0.00010360829,0.000026929365,0.000021042246,0.00009287622,0.00006365202],"category_scores_gemma":[0.00034105734,0.00018806399,0.00013854628,0.00021732105,0.000052716892,0.00012618983,0.000008098103,0.0002858198,0.00000586267],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013394905,0.000974268,0.9915078,0.00033596344,0.000028353692,0.00008904611,0.00016717378,0.00019184667,0.00018377576,0.00007377807,0.00020804525,0.0049004313],"study_design_scores_gemma":[0.0008964128,0.0008400077,0.99527746,0.0010401255,0.00012793252,0.000021044827,0.0000023467712,0.0005104237,0.0008236553,0.00012734492,0.00014791464,0.0001853241],"about_ca_topic_score_codex":0.00013334183,"about_ca_topic_score_gemma":0.00018876663,"teacher_disagreement_score":0.0047151074,"about_ca_system_score_codex":0.00024868152,"about_ca_system_score_gemma":0.00010689002,"threshold_uncertainty_score":0.7669027},"labels":[],"label_agreement":null},{"id":"W2082150533","doi":"10.1073/pnas.1009845107","title":"Pathway analysis of <i>Candida albicans</i> survival and virulence determinants in a murine infection model","year":2010,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":132,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Merck Canada Inc. (Canada)","funders":"Genome Canada","keywords":"Virulence; Biology; Candida albicans; Gene; Ergosterol; Microbiology; Transcriptome; Corpus albicans; Doxycycline; Context (archaeology); Mutant; Tetracycline; Phenotype; Genetics; Antibiotics; Gene expression","score_opus":0.034127000821667794,"score_gpt":0.32786678065934627,"score_spread":0.29373977983767846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082150533","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982142,0.000024869916,0.0000022884228,0.0002972441,0.000007881591,0.00010016065,0.000012959606,0.0000028654622,0.001337548],"genre_scores_gemma":[0.99945915,0.000040806324,0.00037459293,0.000049139155,0.000011724015,0.0000030721176,7.499478e-8,0.0000015614473,0.00005990311],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987422,0.0000029075766,0.00029916206,0.00018735796,0.00067514484,0.00009319416],"domain_scores_gemma":[0.9994147,0.00007610074,0.0002527283,0.000010335006,0.00021540734,0.00003072705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012994357,0.000060898714,0.00024374084,0.000265415,0.000051880437,0.00000494465,0.00015258395,0.0000659676,0.000008663386],"category_scores_gemma":[0.00062545005,0.00003974157,0.00007109205,0.0011567893,0.00074209174,0.00021138682,0.000053841984,0.00013349317,6.686984e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029806319,0.00004071512,0.5970723,0.000051672374,0.000013536299,4.588597e-9,0.00006677772,0.000036483918,0.4001846,0.0021644852,0.0000023602952,0.00033728426],"study_design_scores_gemma":[0.00014962601,0.000033043394,0.84578896,0.000051799747,0.000060850656,0.0000011448072,0.000044694323,0.01829817,0.132321,0.0032141723,0.0000033588153,0.00003319326],"about_ca_topic_score_codex":0.00007495796,"about_ca_topic_score_gemma":0.000035087425,"teacher_disagreement_score":0.2678636,"about_ca_system_score_codex":0.000013378044,"about_ca_system_score_gemma":0.00005675938,"threshold_uncertainty_score":0.2734268},"labels":[],"label_agreement":null},{"id":"W2082188884","doi":"10.1097/mph.0b013e31829eec5a","title":"Cunninghamella bertholletiae Infection in Children","year":2013,"lang":"en","type":"review","venue":"Journal of Pediatric Hematology/Oncology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Mucormycosis; Medicine; Zygomycosis; Dermatology; Immunology; Amphotericin B; Pathology; Antifungal","score_opus":0.043892239117870595,"score_gpt":0.3873183029744333,"score_spread":0.3434260638565627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082188884","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02175909,0.97474414,0.00005168399,0.00017502558,0.0007428847,0.0009868903,0.000005004385,0.000020225,0.0015150339],"genre_scores_gemma":[0.0013074086,0.99547756,0.0008517001,0.000102704646,0.0018061401,0.000033655026,0.000019671621,0.000055008506,0.00034614414],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9949879,0.00080162723,0.002828238,0.0004336174,0.00038493826,0.0005636645],"domain_scores_gemma":[0.9953568,0.00081886485,0.0027163273,0.00039238643,0.0003852921,0.00033030918],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0017049126,0.0005111726,0.005552735,0.0014785114,0.00005853768,0.000015757802,0.0002711923,0.0018101732,0.0004005639],"category_scores_gemma":[0.0012251905,0.00036717032,0.0012154672,0.0008880324,0.00016555648,0.00013023424,0.000102046244,0.0026604866,0.00031717916],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012250195,0.0010470022,0.42594817,0.008969365,0.0005219965,0.0012956081,0.00010679783,5.468637e-7,6.0486184e-7,0.00008711422,0.023901014,0.5379993],"study_design_scores_gemma":[0.0019694567,0.00166044,0.013880583,0.0019594887,0.0040298314,0.021067783,0.000028801529,0.0000011259397,8.968282e-7,0.00009830344,0.95491856,0.0003847366],"about_ca_topic_score_codex":0.000059932736,"about_ca_topic_score_gemma":0.000034164303,"teacher_disagreement_score":0.9310175,"about_ca_system_score_codex":0.0008845102,"about_ca_system_score_gemma":0.0035115548,"threshold_uncertainty_score":0.99987805},"labels":[],"label_agreement":null},{"id":"W2082683476","doi":"10.1016/j.vaccine.2012.08.010","title":"A β-mannan trisaccharide conjugate vaccine aids clearance of Candida albicans in immunocompromised rabbits","year":2012,"lang":"en","type":"article","venue":"Vaccine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; University of Alberta","funders":"","keywords":"Candida albicans; Toxoid; Mannan; Microbiology; Antibody; Conjugate vaccine; Diphtheria toxin; Biology; Virology; Conjugate; Corpus albicans; Immunology; Immunization; Toxin","score_opus":0.015389907916210515,"score_gpt":0.2794783539837528,"score_spread":0.2640884460675423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082683476","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933718,0.0034877583,0.000058418238,0.00051697186,0.00013879527,0.0006837434,0.00001624586,0.000046123463,0.0016801764],"genre_scores_gemma":[0.9972225,0.00036783004,0.00034457262,0.00030956263,0.00013580265,0.000027560181,0.000021662683,0.000032359458,0.0015381726],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980592,0.00005982243,0.00072090805,0.00031522644,0.00026867024,0.00057616684],"domain_scores_gemma":[0.99874896,0.00009843027,0.00018234357,0.0006121998,0.00013344655,0.00022463991],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069020654,0.00024129273,0.00081913866,0.00018942716,0.00004751147,0.000006616291,0.00015827769,0.00012711812,0.0008451457],"category_scores_gemma":[0.00024224285,0.00019874569,0.00015651848,0.00055396237,0.000018412895,0.00019635445,0.00005220461,0.00032848347,0.000057844307],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004545953,0.00055790733,0.8373959,0.00023731524,0.000069698806,0.000018083985,0.00046183358,0.0000033108713,0.15179121,0.00027109298,0.0005496767,0.004098035],"study_design_scores_gemma":[0.008101384,0.00046587747,0.9555494,0.00027572154,0.00007726445,0.000016533739,0.00020851867,0.00006866465,0.031173144,0.000046309557,0.00382291,0.00019422507],"about_ca_topic_score_codex":0.00074292,"about_ca_topic_score_gemma":0.00040276663,"teacher_disagreement_score":0.12061807,"about_ca_system_score_codex":0.00010478019,"about_ca_system_score_gemma":0.00011506676,"threshold_uncertainty_score":0.92537534},"labels":[],"label_agreement":null},{"id":"W2082844856","doi":"10.2310/7070.2005.34607","title":"Mucormycosis in Immunocompetent Individuals: An Increasing Trend","year":2005,"lang":"en","type":"article","venue":"The Journal of Otolaryngology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Mucormycosis; Medicine; Paranasal sinuses; Nose; Mycosis; Surgery; Sinusitis; Amphotericin B; Dermatology; Antifungal","score_opus":0.02031322390882781,"score_gpt":0.29854082640819496,"score_spread":0.2782276024993672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082844856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99581444,0.0014752371,0.00004515781,0.0017472816,0.000066424225,0.00012312342,0.0000012947712,0.00000706609,0.00071996753],"genre_scores_gemma":[0.9973837,0.0003281012,0.0012930356,0.00072670303,0.00021228728,0.0000010627517,0.0000022931122,0.000010599991,0.000042210064],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983542,0.00049379136,0.00059809914,0.00009040221,0.00022692519,0.00023656432],"domain_scores_gemma":[0.99903077,0.00026681492,0.00025649628,0.000268659,0.00007535644,0.000101916936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002572556,0.00010810194,0.00039486427,0.00018688296,0.00006111971,0.000008610873,0.00021971049,0.00008931833,0.0001947695],"category_scores_gemma":[0.0002326541,0.000065839995,0.00010609337,0.00017076859,0.00012925596,0.00021198773,0.000037738188,0.0005184141,0.000016121687],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013392594,0.00039022492,0.9622424,0.000014682143,0.000070288355,0.000071302566,0.0014522393,0.000017450227,0.026084032,0.00008840654,0.000080825055,0.008148874],"study_design_scores_gemma":[0.0013514253,0.00067007716,0.99204993,0.00007501874,0.00009993678,0.0019275638,0.0005872383,0.000074951575,0.0011544749,0.00012261103,0.0018231624,0.00006358915],"about_ca_topic_score_codex":0.00009567684,"about_ca_topic_score_gemma":0.0004564549,"teacher_disagreement_score":0.029807534,"about_ca_system_score_codex":0.000109954235,"about_ca_system_score_gemma":0.00012581298,"threshold_uncertainty_score":0.2684877},"labels":[],"label_agreement":null},{"id":"W2083076878","doi":"10.1371/journal.ppat.1001140","title":"Gene Annotation and Drug Target Discovery in Candida albicans with a Tagged Transposon Mutant Collection","year":2010,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Human Genome Research Institute; Canadian Institutes of Health Research; Centers for Disease Control and Prevention; National Institutes of Health","keywords":"Genetic screen; Candida albicans; Haploinsufficiency; Biology; Corpus albicans; Mutant; Gene; Genetics; Antifungal drug; Transposable element; Mutation; Phenotype","score_opus":0.007438158958430965,"score_gpt":0.2216186878171901,"score_spread":0.21418052885875913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083076878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982474,0.000058049718,0.00029976392,0.00041539766,0.000051424762,0.00048095436,0.00009089857,0.00003118584,0.000324927],"genre_scores_gemma":[0.9976145,0.000056263583,0.0015514756,0.00009884331,0.000057516634,0.000034645233,0.00006391886,0.000018773992,0.00050403056],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990353,0.000039848335,0.00018901295,0.00030818232,0.0002189629,0.00020871803],"domain_scores_gemma":[0.9995509,0.00004518404,0.00004754097,0.00018771511,0.00006734943,0.0001013437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016144775,0.0001315148,0.00024504887,0.000090988426,0.000083855775,0.000020266643,0.000029465431,0.000071936585,0.00004867169],"category_scores_gemma":[0.00007013068,0.000101376376,0.000036092177,0.00027423896,0.00008997405,0.00013765894,0.0000051212874,0.00025862406,0.0000023132113],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058588263,0.00015841292,0.43832684,0.000052474057,0.000016973387,0.000075318094,0.0012169007,0.0000023056546,0.5593741,0.000014358973,0.00001130415,0.00016515973],"study_design_scores_gemma":[0.0017864971,0.00029002156,0.8744515,0.00008989221,0.00010460323,0.000031901694,0.0006064291,0.0005243734,0.121790916,0.00006003881,0.00009140598,0.0001723855],"about_ca_topic_score_codex":0.00024302742,"about_ca_topic_score_gemma":0.014678596,"teacher_disagreement_score":0.43758318,"about_ca_system_score_codex":0.000054352622,"about_ca_system_score_gemma":0.00016032616,"threshold_uncertainty_score":0.8191001},"labels":[],"label_agreement":null},{"id":"W2083478222","doi":"10.1136/bcr-2013-201946","title":"Sinobronchial allergic aspergillosis with allergic bronchopulmonary aspergillosis: a less common co-existence","year":2014,"lang":"en","type":"article","venue":"BMJ Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Georgian College","funders":"","keywords":"Allergic bronchopulmonary aspergillosis; Medicine; Aspergillus fumigatus; Aspergillosis; Asthma; Sinusitis; Aspergillus; Itraconazole; Fungal sinusitis; Allergy; Immunology; Airway; Cystic fibrosis; Antifungal; Dermatology; Microbiology; Internal medicine; Immunoglobulin E; Surgery; Biology","score_opus":0.027602495460234334,"score_gpt":0.3065487395010559,"score_spread":0.2789462440408215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083478222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95485246,0.00050480064,0.00017795087,0.0006301573,0.00023870607,0.0011604958,0.000009502648,0.00024914992,0.042176746],"genre_scores_gemma":[0.9948765,0.000093366405,0.0010262176,0.00074591616,0.00047649402,0.00012788051,0.000097861346,0.00008798301,0.0024677569],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99553615,0.00022423758,0.001178397,0.0011988885,0.0010995151,0.00076280296],"domain_scores_gemma":[0.9964781,0.00016451639,0.00055888144,0.0018739171,0.0002960482,0.00062853046],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011232902,0.00056747545,0.0011164558,0.00014623436,0.00040726797,0.000061774575,0.00011651353,0.00030420252,0.00038020924],"category_scores_gemma":[0.00026833633,0.00044057344,0.00037878865,0.00034404546,0.0004369834,0.00023389135,0.0000960181,0.0005304045,0.00006975826],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002197843,0.0010171738,0.36187795,0.000551733,0.00038235387,0.6189789,0.00033562907,0.0000934111,0.0018830571,0.00029085376,0.0035134011,0.008877677],"study_design_scores_gemma":[0.0024104153,0.0017196449,0.29338187,0.0009272505,0.00052798324,0.673307,0.0012361573,0.0010323853,0.0016461811,0.00031074832,0.022276394,0.001223953],"about_ca_topic_score_codex":0.0007572605,"about_ca_topic_score_gemma":0.001018333,"teacher_disagreement_score":0.068496086,"about_ca_system_score_codex":0.00025422534,"about_ca_system_score_gemma":0.00035501123,"threshold_uncertainty_score":0.9998046},"labels":[],"label_agreement":null},{"id":"W2083602916","doi":"10.1080/13693780310001624556","title":"Antifungal susceptibility of 50<i>Candida</i>isolates from invasive mycoses in Chile","year":2004,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Itraconazole; Fluconazole; Microbiology; Biology; Amphotericin B; Candida glabrata; Azole; Candida parapsilosis; Mycosis; Antifungal; Immunology","score_opus":0.011568049288720558,"score_gpt":0.27848493243073924,"score_spread":0.26691688314201867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083602916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942771,0.0010242239,0.000171011,0.0017845774,0.0002704144,0.00042721946,0.00004604728,0.00004939754,0.0019500044],"genre_scores_gemma":[0.9976463,0.00035180995,0.0005477699,0.0011246462,0.00016799028,0.000017869821,0.00006914089,0.00001813508,0.00005638238],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997516,0.0001642512,0.00075886294,0.0005767481,0.0005014643,0.00048269038],"domain_scores_gemma":[0.998065,0.00083532237,0.00013396914,0.0004996271,0.000116974494,0.00034908764],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006478275,0.00021731124,0.0008897099,0.00014091839,0.000048000293,0.0000049329724,0.00023483667,0.0004762769,0.004122467],"category_scores_gemma":[0.0041869413,0.00017769067,0.00017054529,0.0003266395,0.00079540105,0.00007399883,0.00011560339,0.0006303684,0.00009147769],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009792378,0.0012007327,0.9505377,0.00015307059,0.000071119,0.00027252448,0.0004475528,0.000004126752,0.044128712,0.00047887609,0.0004131816,0.0013131917],"study_design_scores_gemma":[0.0038679307,0.00087022845,0.96984845,0.00033266196,0.00006174453,0.000027214423,0.00031511133,0.000014082068,0.019211268,0.004879685,0.0004128085,0.00015878605],"about_ca_topic_score_codex":0.0029017823,"about_ca_topic_score_gemma":0.014881621,"teacher_disagreement_score":0.024917444,"about_ca_system_score_codex":0.00017945479,"about_ca_system_score_gemma":0.0010909138,"threshold_uncertainty_score":0.9967879},"labels":[],"label_agreement":null},{"id":"W2083838348","doi":"10.5650/jos.ess14195","title":"The Influence of Biodegradable Gemini Surfactants, N,N’-bis(1-Decyloxy-1-Oxopronan-2-yl)-N,N,N’,N’ Tetramethylpropane-1,3-Diammonium Dibromide and N,N’-bis(1-Dodecyloxy-1-Oxopronan-2-yl) N,N,N’,N’-Tetramethylethane-1,2-Diammonium Dibromide, on Fungal Biofilm and Adhesion","year":2015,"lang":"en","type":"article","venue":"Journal of Oleo Science","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics","keywords":"Chemistry; Candida albicans; Biofilm; Ammonium; Corpus albicans; Crystal violet; Nuclear chemistry; Alkyl; Yeast; Polymer chemistry; Organic chemistry; Stereochemistry; Bacteria; Microbiology; Biochemistry; Biology","score_opus":0.025432595761647477,"score_gpt":0.28993362619749097,"score_spread":0.2645010304358435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083838348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.985602,0.010226267,0.00005874902,0.0015946217,0.0005742425,0.0009156771,0.000048980233,0.000056776305,0.00092267274],"genre_scores_gemma":[0.9915669,0.0028242688,0.0041903732,0.00032277283,0.00020675942,0.000013915829,0.0000026293023,0.00007081858,0.00080154854],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99083066,0.00035506376,0.0023001088,0.0013256585,0.0036123926,0.0015761389],"domain_scores_gemma":[0.99136984,0.0017839477,0.0017602587,0.0011632538,0.002189509,0.0017331974],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0089849075,0.0008624668,0.0017115204,0.0008108391,0.00083539024,0.00040144072,0.0013717079,0.0004415917,0.000017905946],"category_scores_gemma":[0.0068265395,0.0005597774,0.00038263228,0.0020992532,0.0049874643,0.0016541296,0.00038983388,0.0016749046,0.0000143562565],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004683832,0.0006629674,0.1922774,0.00038227078,0.00014259186,0.00029546593,0.0008110031,0.000096984644,0.7848707,0.0006726376,0.00091653614,0.014187625],"study_design_scores_gemma":[0.0051869433,0.006675249,0.6598265,0.0015531111,0.0003894549,0.0011926953,0.0036316966,0.00037426598,0.3156054,0.0011844203,0.0033485151,0.0010317352],"about_ca_topic_score_codex":0.00038510852,"about_ca_topic_score_gemma":0.000112672846,"teacher_disagreement_score":0.46926528,"about_ca_system_score_codex":0.00051776035,"about_ca_system_score_gemma":0.003213493,"threshold_uncertainty_score":0.99968535},"labels":[],"label_agreement":null},{"id":"W2084577762","doi":"10.1371/journal.ppat.1000753","title":"Reverse Genetics in Candida albicans Predicts ARF Cycling Is Essential for Drug Resistance and Virulence","year":2010,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Biotechnology Research Institute; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Candida albicans; Fluconazole; Biology; Corpus albicans; Antifungal drug; Microbiology; Virulence; Fungal protein; Virulence factor; Caspofungin; Aspergillus fumigatus; Drug resistance; Mutant; Biochemistry; Gene","score_opus":0.012861251139068138,"score_gpt":0.2696157386198597,"score_spread":0.25675448748079155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084577762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996975,0.00042801962,0.00024626666,0.00079814176,0.00014529449,0.00063204544,0.00020887011,0.000032896827,0.0005334437],"genre_scores_gemma":[0.9909788,0.00039497754,0.0060850647,0.00046230413,0.00019899076,0.000040632644,0.000019791267,0.000026130912,0.0017933339],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99856424,0.000027010032,0.0003198968,0.00047688105,0.00026072815,0.00035122503],"domain_scores_gemma":[0.9990459,0.00013609268,0.00008007136,0.00042998127,0.00012210793,0.0001858489],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002898675,0.00016397987,0.00031391502,0.000067331304,0.00010596087,0.000018814364,0.00009451978,0.00012441566,0.00008062521],"category_scores_gemma":[0.0004228898,0.00015502477,0.00007736365,0.00013983961,0.00017195515,0.00006033097,0.00003720168,0.000301056,0.0000065145655],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047173898,0.00019907916,0.36991248,0.00045638913,0.000031505744,0.00007008782,0.0015935727,7.896092e-7,0.6252908,0.00010026394,0.0012093455,0.0006639487],"study_design_scores_gemma":[0.0064259474,0.0002733061,0.7521296,0.0012160228,0.0006796308,0.000024624456,0.0013621106,0.0037919518,0.21374577,0.0019172578,0.01743265,0.0010011293],"about_ca_topic_score_codex":0.000046342873,"about_ca_topic_score_gemma":0.0049397335,"teacher_disagreement_score":0.41154504,"about_ca_system_score_codex":0.000036012,"about_ca_system_score_gemma":0.00014764776,"threshold_uncertainty_score":0.63217264},"labels":[],"label_agreement":null},{"id":"W2084634062","doi":"10.1159/000238958","title":"Effects of Culture Media on the in vitro Susceptibility of Selected Opportunistic Fungi to Fluconazole and Itraconazole","year":2009,"lang":"en","type":"article","venue":"Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta","funders":"","keywords":"Itraconazole; Fluconazole; Microbiology; Alternaria alternata; Candida albicans; Aspergillus fumigatus; Biology; Minimum inhibitory concentration; Antifungal; Horticulture; Antimicrobial","score_opus":0.01053594504143987,"score_gpt":0.2612216288148452,"score_spread":0.2506856837734053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084634062","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997025,0.00046496352,0.0000429543,0.001198368,0.00002413001,0.0006234755,0.000013254793,0.000017041888,0.0005907728],"genre_scores_gemma":[0.9976102,0.00022621389,0.00020387507,0.0017327849,0.000036051304,0.0000060441885,0.0000123545715,0.000009653858,0.00016280627],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989834,0.000053512147,0.00028769954,0.0002546987,0.00022698376,0.000193748],"domain_scores_gemma":[0.99905455,0.0003133644,0.00007517652,0.00031395085,0.0001332339,0.0001097151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002777722,0.00014874969,0.00041713173,0.000056428013,0.0000239546,0.000004106008,0.00009274844,0.00010111184,0.00005723204],"category_scores_gemma":[0.00039725087,0.000096086245,0.00006693971,0.00032848897,0.00011207059,0.00002484737,0.000007724693,0.0001825449,0.0000024126716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018186916,0.00042595805,0.012055231,0.0001565645,0.000019686242,0.000006820018,0.0013412767,2.3815498e-7,0.9714895,0.00019723715,0.00059415435,0.011894666],"study_design_scores_gemma":[0.0009100296,0.00033970436,0.47663826,0.00008666591,0.000013190376,0.0000010854333,0.00010995751,0.000018829069,0.52147424,0.00023766514,0.00011332603,0.00005702416],"about_ca_topic_score_codex":0.000014038656,"about_ca_topic_score_gemma":0.000024262254,"teacher_disagreement_score":0.46458304,"about_ca_system_score_codex":0.000041933414,"about_ca_system_score_gemma":0.00008290724,"threshold_uncertainty_score":0.39182833},"labels":[],"label_agreement":null},{"id":"W2084772102","doi":"10.1016/j.athoracsur.2004.08.070","title":"Aspergillus Endocarditis After Cardiac Surgery","year":2005,"lang":"en","type":"review","venue":"The Annals of Thoracic Surgery","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"","keywords":"Medicine; Endocarditis; Aspergillus; Cardiac surgery; Surgery; Cardiology; Microbiology","score_opus":0.19724024800626727,"score_gpt":0.4390589519819709,"score_spread":0.24181870397570365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084772102","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013336584,0.99394935,0.000003274099,0.00044235503,0.00093230006,0.0007533966,0.00049494125,0.00007939225,0.0020113084],"genre_scores_gemma":[0.005645788,0.9898558,0.000016111766,0.00044845667,0.0016388011,0.00016571757,0.0002928911,0.00012141227,0.0018149762],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9946933,0.0012217817,0.0017136183,0.00066667784,0.00091209036,0.0007925681],"domain_scores_gemma":[0.9905152,0.006066061,0.0008018629,0.0019816048,0.00036221536,0.00027306273],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0051345755,0.0007047803,0.0063726553,0.00045219745,0.00010425002,0.000033492335,0.0002772268,0.00047461002,0.00079692266],"category_scores_gemma":[0.0015623341,0.00043828893,0.0073692254,0.00077324413,0.00041975395,0.0001382241,0.00014362537,0.00072515523,0.00037529875],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002064646,0.00008654156,0.0011257648,0.013542467,0.0008754777,0.00017392547,0.00002092087,4.0112536e-8,2.84067e-7,0.00000400568,0.07409118,0.90987295],"study_design_scores_gemma":[0.000008759819,0.000015801623,0.0014591663,0.017649136,0.001634409,0.00007052669,0.000022581438,2.2631907e-7,0.00004370062,0.000021584008,0.97868156,0.00039254734],"about_ca_topic_score_codex":0.00004032142,"about_ca_topic_score_gemma":0.000006277402,"teacher_disagreement_score":0.9094804,"about_ca_system_score_codex":0.000069282134,"about_ca_system_score_gemma":0.0011274691,"threshold_uncertainty_score":0.9998069},"labels":[],"label_agreement":null},{"id":"W2085121040","doi":"10.1016/j.mmcr.2012.12.007","title":"Cytological, microbiological and therapeutic aspects of systemic infection in a dog caused by the fungus Phialosimplex caninus","year":2013,"lang":"en","type":"article","venue":"Medical Mycology Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; Oakville-Trafalgar Memorial Hospital; University of Guelph; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Health Services","keywords":"Medicine; Pathology; Fungus; Cytology; Itraconazole; Biology; Dermatology; Antifungal; Botany","score_opus":0.01788378569399918,"score_gpt":0.289679848617718,"score_spread":0.27179606292371883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085121040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99482465,0.0023256855,0.000033351283,0.0012458351,0.00016035815,0.0008967943,0.0000033846516,0.000037579422,0.00047237042],"genre_scores_gemma":[0.9986032,0.00027838713,0.000007239788,0.0008840187,0.00005365363,0.00009228276,0.000011507155,0.000008790175,0.00006088059],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99790394,0.0003473021,0.0007414621,0.00042019048,0.0002395166,0.00034756266],"domain_scores_gemma":[0.9985524,0.0005697195,0.00023205012,0.00032982187,0.00010743626,0.00020856666],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000982786,0.00017328527,0.00062480004,0.00006338987,0.00008127183,0.0000079364445,0.000039463277,0.0004930378,0.0009321288],"category_scores_gemma":[0.0014376807,0.00009481194,0.00008286329,0.00020880043,0.00074374175,0.000024974355,0.00006200978,0.00049630617,0.0000073076794],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009034138,0.00043891408,0.8417233,0.00019509815,0.00010030508,0.066598326,0.00020045176,3.8864007e-7,0.08551271,0.00013992531,0.0020505171,0.0029496774],"study_design_scores_gemma":[0.0009879771,0.0008313386,0.7650738,0.00014124022,0.000114619135,0.2300435,0.00022423698,0.00004935901,0.0011760446,0.0007521392,0.00045708986,0.00014870422],"about_ca_topic_score_codex":0.0027354334,"about_ca_topic_score_gemma":0.0012579099,"teacher_disagreement_score":0.16344517,"about_ca_system_score_codex":0.00011097315,"about_ca_system_score_gemma":0.0002587837,"threshold_uncertainty_score":0.99998116},"labels":[],"label_agreement":null},{"id":"W2086367215","doi":"10.1016/j.ccc.2013.06.007","title":"Why Candida Sepsis Should Matter to ICU Physicians","year":2013,"lang":"en","type":"review","venue":"Critical Care Clinics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"","keywords":"Medicine; Intensive care medicine; Intensive care unit; Sepsis; Incidence (geometry); Epidemiology; Candida infections; Intensive care; Disease; Intervention (counseling); Antifungal; Internal medicine; Nursing","score_opus":0.13905455895231142,"score_gpt":0.4699401678311728,"score_spread":0.3308856088788614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086367215","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000060033897,0.98762256,0.00022318133,0.0025636386,0.0008719753,0.0013147015,0.00033152688,0.00008218221,0.006930225],"genre_scores_gemma":[0.0005082784,0.95849174,0.0007255705,0.035876874,0.0012023514,0.00020761379,0.0002891806,0.000147069,0.002551321],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99669254,0.000171518,0.0010218099,0.00092569855,0.0005149606,0.00067350344],"domain_scores_gemma":[0.9963868,0.0011185006,0.00008555678,0.0012002359,0.0006365994,0.00057226344],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00019792399,0.00055872346,0.0027375678,0.000105561936,0.00010870302,0.00007907451,0.00029618686,0.00077751005,0.0019348537],"category_scores_gemma":[0.0017211805,0.00043084048,0.001307096,0.00032143283,0.00027828745,0.000067150126,0.00015626544,0.0011592973,0.0044800728],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022889106,0.00015582744,0.00081633695,0.060092878,0.00009609555,0.00011515071,0.00014131307,2.6722036e-8,4.0382483e-7,0.00015681713,0.2552729,0.6831294],"study_design_scores_gemma":[0.00012803629,0.0002466676,0.0001501351,0.01208594,0.0020526436,0.000009669256,0.00040419667,7.55951e-7,9.442624e-7,0.00006077637,0.9844227,0.00043757426],"about_ca_topic_score_codex":0.00004772596,"about_ca_topic_score_gemma":0.00007706267,"teacher_disagreement_score":0.72914976,"about_ca_system_score_codex":0.00029109296,"about_ca_system_score_gemma":0.00041015382,"threshold_uncertainty_score":0.99981433},"labels":[],"label_agreement":null},{"id":"W2086464169","doi":"10.1128/iai.70.1.19-26.2002","title":"Serum Stimulates Growth of and Proteinase Secretion by<i>Aspergillus fumigatus</i>","year":2002,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Aspergillus fumigatus; Bovine serum albumin; Secretion; Biology; Fetal bovine serum; Microbiology; Serum albumin; Biochemistry; In vitro","score_opus":0.015377659566427924,"score_gpt":0.24580305875941644,"score_spread":0.23042539919298852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086464169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969001,0.00079443865,0.00009520413,0.00019030682,0.000029615187,0.00023288066,0.000010810503,0.000035852576,0.0017108222],"genre_scores_gemma":[0.9982017,0.0011538117,0.000024746003,0.00009408514,0.000015041698,0.0000042845136,0.000011075982,0.0000061314777,0.00048910186],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99947774,0.000063125015,0.00015422812,0.000118107455,0.00008839322,0.00009843005],"domain_scores_gemma":[0.99960375,0.000032658536,0.000050335875,0.00013439429,0.0001066185,0.00007221676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016228702,0.00008619343,0.00016776199,0.000042426953,0.00011792822,0.000010410479,0.000014023654,0.00007825219,0.00020487387],"category_scores_gemma":[0.00014707222,0.00007341792,0.000029153536,0.00011508274,0.00014788314,0.000113281836,0.000022195867,0.00017117629,0.000004503395],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021239225,0.00036879783,0.8400826,0.0004660857,0.00004204325,0.0000025059462,0.00040757272,6.6278074e-7,0.14598648,0.00016756557,0.0005862974,0.011676997],"study_design_scores_gemma":[0.0012497028,0.000772832,0.9640471,0.000108698754,0.000048654696,0.00002586043,0.00008171902,0.0011564768,0.031130036,0.00022022016,0.0010439132,0.00011479167],"about_ca_topic_score_codex":0.0005760863,"about_ca_topic_score_gemma":0.000036015866,"teacher_disagreement_score":0.1239645,"about_ca_system_score_codex":0.000019244517,"about_ca_system_score_gemma":0.0000073695164,"threshold_uncertainty_score":0.2993896},"labels":[],"label_agreement":null},{"id":"W2086675747","doi":"10.1002/yea.1389","title":"<i>In vitro</i> synergistic effect of farnesol and human gingival cells against <i>Candida albicans</i>","year":2006,"lang":"en","type":"article","venue":"Yeast","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Université Laval","keywords":"Farnesol; Candida albicans; Germ tube; Corpus albicans; Biology; Microbiology; Filamentation; Biochemistry","score_opus":0.0036601427747049845,"score_gpt":0.23653267969166172,"score_spread":0.23287253691695675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086675747","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876492,0.00020265188,0.000040925468,0.000055747605,0.00006236871,0.00024232474,0.000029497327,0.000019971565,0.011697293],"genre_scores_gemma":[0.99814516,0.000008616769,0.00004888191,0.00012112528,0.00010945686,0.000007184446,0.000028099445,0.000015782613,0.0015156963],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99903864,0.000052809497,0.00025468672,0.00024337423,0.00018746367,0.00022302277],"domain_scores_gemma":[0.9995432,0.00007277609,0.00005982935,0.00022719133,0.000026344931,0.00007067791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021630763,0.00013961064,0.0003869944,0.00006252068,0.00003958757,0.000008174002,0.000051088537,0.000064496264,0.00003832711],"category_scores_gemma":[0.000028980316,0.00011421046,0.00006914976,0.000131354,0.00015831499,0.000039865055,0.000022657816,0.00013226732,0.000010793291],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003479972,0.00009464849,0.05130674,0.00028980098,0.000009580277,0.000074885975,0.000025597823,0.0000048439674,0.94636065,0.00013639133,0.0008182432,0.0005306449],"study_design_scores_gemma":[0.0035135455,0.00044737718,0.11394289,0.00023581299,0.000115447154,0.000008738046,0.00005085123,0.00010281042,0.8773842,0.000082618084,0.003869012,0.00024671652],"about_ca_topic_score_codex":0.00053811347,"about_ca_topic_score_gemma":0.00012543087,"teacher_disagreement_score":0.06897645,"about_ca_system_score_codex":0.00003821119,"about_ca_system_score_gemma":0.000028142502,"threshold_uncertainty_score":0.46573675},"labels":[],"label_agreement":null},{"id":"W2087796927","doi":"10.7326/m13-2508","title":"Combination Antifungal Therapy for Invasive Aspergillosis","year":2015,"lang":"en","type":"article","venue":"Annals of Internal Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":500,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Medicine; Voriconazole; Internal medicine; Anidulafungin; Aspergillosis; Combination therapy; Population; Placebo; Randomized controlled trial; Post-hoc analysis; Surgery; Gastroenterology; Caspofungin; Antifungal; Immunology; Pathology","score_opus":0.13365387506136464,"score_gpt":0.3943088989596521,"score_spread":0.26065502389828743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087796927","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9766983,0.002074196,0.0009287791,0.010082173,0.00035592736,0.00048147878,0.000013118411,0.00002617588,0.009339859],"genre_scores_gemma":[0.99317247,0.0006493923,0.00020247146,0.0041202074,0.00030214657,0.000015632062,0.000027933238,0.000016243917,0.0014935051],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99866986,0.00003834443,0.00043626202,0.0002184274,0.0004381757,0.00019893343],"domain_scores_gemma":[0.9977973,0.0002362189,0.00017857144,0.0002502061,0.0013204984,0.0002171893],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077416137,0.00014016846,0.00046906358,0.00012909179,0.000025513766,0.0000040352934,0.00012306751,0.00007565826,0.00014478578],"category_scores_gemma":[0.0021827843,0.00009615363,0.00014128565,0.00013756298,0.0002211929,0.00009295375,0.000019164476,0.00011579907,0.000010353947],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011864922,0.001029029,0.65964174,0.00038830473,0.0005102484,0.00004773918,0.0019552596,0.000001505215,0.071787104,0.004601676,0.2223649,0.025807574],"study_design_scores_gemma":[0.01492916,0.020319296,0.55043185,0.0022093083,0.00012915937,0.000050622457,0.0025769824,0.0002103846,0.38157886,0.008757484,0.018492939,0.00031391723],"about_ca_topic_score_codex":0.0001787686,"about_ca_topic_score_gemma":0.000021395448,"teacher_disagreement_score":0.30979177,"about_ca_system_score_codex":0.000024749477,"about_ca_system_score_gemma":0.00012889404,"threshold_uncertainty_score":0.39210314},"labels":[],"label_agreement":null},{"id":"W2088743347","doi":"10.5489/cuaj.1214","title":"Ureteric obstruction due to fungus-ball in a chronically immunosuppressed patient","year":2013,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Candida albicans; Urinary system; Medicine; Fungus; Ureter; Hydronephrosis; Perioperative; Surgery; Intensive care medicine; Microbiology; Internal medicine; Biology","score_opus":0.007216050802713866,"score_gpt":0.21397982045576067,"score_spread":0.2067637696530468,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088743347","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9818617,0.00015463884,0.000048024624,0.015461121,0.0002699415,0.00036180086,0.000007936769,0.000016302447,0.0018185534],"genre_scores_gemma":[0.9937524,0.000020704356,0.00031269985,0.005452809,0.00016729732,0.000021755382,0.0000096842405,0.000008746914,0.0002538556],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983218,0.00015006727,0.00044953678,0.00021474726,0.00032976613,0.0005340907],"domain_scores_gemma":[0.99856305,0.00008797341,0.00014632934,0.00013707859,0.00030905174,0.00075648626],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000360936,0.00012275355,0.00028876573,0.0001639753,0.00012894633,0.00008751405,0.00010072364,0.0002398207,0.0018926751],"category_scores_gemma":[0.0013017092,0.000099916826,0.00011328828,0.0002707953,0.000021981274,0.00012911012,0.000015457796,0.0005990628,0.0002738329],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014878473,0.000087783206,0.9654101,0.000008099234,0.00004871918,0.00019314102,0.00027763547,0.000059387163,0.0047132713,0.000056138815,0.013462691,0.015534206],"study_design_scores_gemma":[0.00055061956,0.00050013274,0.98763496,0.000018062663,0.000013813869,0.00009861655,0.000102517,0.000077781966,0.000034717228,0.00059060735,0.010272376,0.000105827654],"about_ca_topic_score_codex":0.0024913559,"about_ca_topic_score_gemma":0.0030665644,"teacher_disagreement_score":0.022224784,"about_ca_system_score_codex":0.0021793959,"about_ca_system_score_gemma":0.0004565942,"threshold_uncertainty_score":0.99901974},"labels":[],"label_agreement":null},{"id":"W2089127461","doi":"10.1016/j.bmc.2003.08.003","title":"Semisynthetic modifications of hemiaminal function at ornithine unit of mulundocandin, towards chemical stability and antifungal activity","year":2003,"lang":"en","type":"article","venue":"Bioorganic & Medicinal Chemistry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Chemistry; Hemiaminal; Aspergillus fumigatus; In vivo; Candida albicans; Stereochemistry; Nucleophile; Microbiology; Biochemistry; Biology","score_opus":0.030416956184377935,"score_gpt":0.268084300103177,"score_spread":0.2376673439187991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089127461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99436426,0.00074612716,0.00039195584,0.0001501228,0.000049302653,0.000216082,0.000049881524,0.000031558782,0.0040007075],"genre_scores_gemma":[0.9990683,0.00009209478,0.00015811829,0.000022428138,0.000057155725,0.0000063810908,0.000032293472,0.000019407897,0.0005437863],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981889,0.000056073306,0.0004964706,0.0004650666,0.0005255718,0.0002678878],"domain_scores_gemma":[0.9984488,0.00014414542,0.00024310978,0.0005822581,0.00031569903,0.00026598887],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005708806,0.00023667395,0.0005934482,0.000033432483,0.0000731566,0.0000037975612,0.000098217984,0.00023884738,0.0014291673],"category_scores_gemma":[0.0012037536,0.00020361645,0.00011555953,0.00031164676,0.0007767999,0.000051408217,0.000054880365,0.00034223282,0.0000028494696],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079792883,0.0003970397,0.066730775,0.0012174712,0.000062879095,0.000005187817,0.000116136944,5.2573778e-8,0.929902,0.000026274307,0.000083349194,0.00066086854],"study_design_scores_gemma":[0.0011638601,0.00014247837,0.08466473,0.00016934199,0.00029656943,0.00010792746,0.00051146036,0.000031539203,0.91255647,0.000048936643,0.00016871409,0.00013797097],"about_ca_topic_score_codex":0.000042585605,"about_ca_topic_score_gemma":0.0000050860494,"teacher_disagreement_score":0.017933955,"about_ca_system_score_codex":0.00018796061,"about_ca_system_score_gemma":0.00042858807,"threshold_uncertainty_score":0.99948364},"labels":[],"label_agreement":null},{"id":"W2089342187","doi":"10.1016/j.cub.2009.01.043","title":"Yeast Mating: Putting Some Fizz into Fungal Sex?","year":2009,"lang":"en","type":"letter","venue":"Current Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"","keywords":"Biology; Mating; Mating type; Candida albicans; Yeast; Microbiology; Pathogen; Zoology; Genetics; Gene","score_opus":0.04012389068837019,"score_gpt":0.34284587636467667,"score_spread":0.3027219856763065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089342187","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11722171,0.035347693,0.0008125181,0.8269412,0.008612557,0.0022387546,0.0003396624,0.00077621173,0.0077096657],"genre_scores_gemma":[0.21070868,0.0013470785,0.0018955721,0.720695,0.04664805,0.00008774145,0.0068721017,0.00017987225,0.011565869],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99753284,0.00017412238,0.00057487015,0.00080694276,0.00022599666,0.0006852452],"domain_scores_gemma":[0.99875414,0.00011965932,0.00025751686,0.00064114976,0.00011179244,0.00011570861],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00030021684,0.00042941442,0.0008968381,0.00016411631,0.00011937929,0.000022370521,0.00025573486,0.0010107026,0.00026901375],"category_scores_gemma":[0.0003110681,0.00034824884,0.000315302,0.00012125197,0.0002426669,0.000052033345,0.00010175172,0.0025573007,0.0003924461],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038984737,0.00008765368,0.02125788,0.0008780012,0.000064662214,0.00015325012,0.00011084855,6.678242e-8,0.0012416732,0.00013131609,0.8412857,0.13474998],"study_design_scores_gemma":[0.00048229904,0.00029530868,0.005967687,0.0004481855,0.00012101973,0.000041852494,0.00002351362,0.000021175416,0.00021863733,0.002564025,0.9894826,0.0003336939],"about_ca_topic_score_codex":0.000017313821,"about_ca_topic_score_gemma":0.000004404669,"teacher_disagreement_score":0.1481969,"about_ca_system_score_codex":0.00017554294,"about_ca_system_score_gemma":0.00022196573,"threshold_uncertainty_score":0.99989694},"labels":[],"label_agreement":null},{"id":"W2089731990","doi":"10.1002/cncr.21142","title":"Immunomodulation with interferon‐gamma and colony‐stimulating factors for refractory fungal infections in patients with leukemia","year":2005,"lang":"en","type":"article","venue":"Cancer","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Moncton Hospital","funders":"","keywords":"Medicine; Neutropenia; Immunology; Immunosuppression; Refractory (planetary science); Cytokine; Granulocyte colony-stimulating factor; Leukemia; Granulocyte macrophage colony-stimulating factor; Interferon gamma; Acute leukemia; Internal medicine; Toxicity; Chemotherapy; Biology","score_opus":0.012839636778658282,"score_gpt":0.2751124928601948,"score_spread":0.2622728560815365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089731990","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984282,0.00014047396,0.00053655106,0.00005068984,0.00004138559,0.0005661907,0.000015924328,0.000023026285,0.00019755652],"genre_scores_gemma":[0.9991847,0.000012072548,0.00028214432,0.000055844157,0.00006326283,0.000049701724,0.0000326428,0.000017446044,0.00030218466],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993424,0.000012472954,0.00015725198,0.00021343426,0.000111900205,0.00016256445],"domain_scores_gemma":[0.9995501,0.00007270744,0.000066683184,0.00013066457,0.00012612609,0.000053711115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000059785674,0.000112600326,0.00018728271,0.000057064964,0.00007498686,0.00001217909,0.000020957883,0.000060193302,0.000045825833],"category_scores_gemma":[0.000052242925,0.000079762605,0.00002139193,0.00009642937,0.000063659696,0.00018159897,0.000009090605,0.00013946342,9.180599e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014933414,0.000087285036,0.9895554,0.00005136719,0.000027072216,4.2479007e-7,0.00037823673,0.0004841836,0.00033527715,0.000007782501,0.00004174124,0.0075378986],"study_design_scores_gemma":[0.002844253,0.0014612888,0.99369186,0.00018782272,0.000038793314,4.696087e-7,0.00009847079,0.0006776467,0.00014985415,0.000003503746,0.00074323174,0.00010283232],"about_ca_topic_score_codex":0.00015432217,"about_ca_topic_score_gemma":0.002242964,"teacher_disagreement_score":0.007435066,"about_ca_system_score_codex":0.0006338099,"about_ca_system_score_gemma":0.00015410481,"threshold_uncertainty_score":0.3252625},"labels":[],"label_agreement":null},{"id":"W2089830565","doi":"10.1016/j.cub.2012.01.062","title":"Pho85, Pcl1, and Hms1 Signaling Governs Candida albicans Morphogenesis Induced by High Temperature or Hsp90 Compromise","year":2012,"lang":"en","type":"article","venue":"Current Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":83,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Filamentation; Morphogenesis; Candida albicans; Virulence; Cell biology; Corpus albicans; Regulator; Transcription factor; Transcriptional regulation; Hsp90; Genetics; Heat shock protein; Gene","score_opus":0.03937761469495032,"score_gpt":0.32242891115316685,"score_spread":0.28305129645821653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089830565","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99132866,0.007013797,0.000024948016,0.00031576044,0.00061044673,0.00033393057,0.00026418304,0.000045078297,0.0000631953],"genre_scores_gemma":[0.99805754,0.00048003846,0.00008508203,0.0002769375,0.000392225,0.000024974184,0.0003009323,0.000019313315,0.00036292712],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99862486,0.000101749276,0.00027999334,0.0003824919,0.000121631274,0.0004892438],"domain_scores_gemma":[0.9991267,0.000121041514,0.000094177994,0.0002794013,0.000065240936,0.00031347948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000206982,0.00023574896,0.0004702975,0.000043584456,0.00011873829,0.000012471516,0.00009109817,0.00023406396,0.0005440877],"category_scores_gemma":[0.00012817055,0.00016061086,0.000074176816,0.00014203142,0.00015845841,0.0000669125,0.00004764688,0.00031722136,0.00002668334],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004999089,0.0002526632,0.28498134,0.000121249,0.000060972725,0.0000033230453,0.00020186197,5.9980266e-8,0.7027827,0.00011047154,0.0032239158,0.0077615036],"study_design_scores_gemma":[0.008100463,0.0020318835,0.6779519,0.00048408133,0.0006759039,0.000099904064,0.00135732,0.00004019938,0.1930428,0.00013159492,0.114705645,0.0013783505],"about_ca_topic_score_codex":0.00025120925,"about_ca_topic_score_gemma":0.00009217693,"teacher_disagreement_score":0.50973994,"about_ca_system_score_codex":0.000093144685,"about_ca_system_score_gemma":0.000102911654,"threshold_uncertainty_score":0.65495205},"labels":[],"label_agreement":null},{"id":"W2089969288","doi":"10.1371/journal.pone.0020527","title":"Dual Organism Transcriptomics of Airway Epithelial Cells Interacting with Conidia of Aspergillus fumigatus","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; University of British Columbia; Providence Health Care","funders":"Natural Sciences and Engineering Research Council of Canada; Faculty of Medicine, University of British Columbia; Canadian Institutes of Health Research; Michael Smith Health Research BC; National Sanitarium Association; Canadian Lung Association","keywords":"Aspergillus fumigatus; Transcriptome; Biology; Microbiology; DNA microarray; Conidium; Gene expression; Gene; Cell biology; Genetics","score_opus":0.050443753161533975,"score_gpt":0.22369367933425444,"score_spread":0.17324992617272045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089969288","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942898,0.00008021065,0.00014616009,0.000039470928,0.000054699995,0.0002626781,0.00004326716,0.000024677389,0.0050590243],"genre_scores_gemma":[0.9942322,0.00006478284,0.005072503,0.000046401805,0.00005278778,0.000002685568,0.0000063257394,0.000025607795,0.00049670914],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99887776,0.000032139207,0.0003682424,0.00020548543,0.00032052022,0.00019585167],"domain_scores_gemma":[0.9990988,0.000081877704,0.00015635649,0.00030432228,0.00025954866,0.00009911125],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015895625,0.00013158908,0.00050890533,0.000051444575,0.000025969119,0.0000025095687,0.00007343718,0.00008368342,0.00057306583],"category_scores_gemma":[0.00010844894,0.00010313779,0.000076477285,0.000115241826,0.0001935853,0.00007596398,0.000016509104,0.00021180765,0.000018650639],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017434759,0.001770293,0.027088024,0.0004961612,0.00031170764,0.000023693028,0.003933193,1.4479966e-7,0.9642013,0.00016692742,0.000012678029,0.00025240929],"study_design_scores_gemma":[0.0011833329,0.0010380896,0.020731883,0.000496152,0.00038250384,0.00000362617,0.0010458839,0.000022626915,0.97494894,0.000032672506,0.000013002578,0.000101305304],"about_ca_topic_score_codex":0.00012036429,"about_ca_topic_score_gemma":0.00007600392,"teacher_disagreement_score":0.010747628,"about_ca_system_score_codex":0.000031883686,"about_ca_system_score_gemma":0.00013119666,"threshold_uncertainty_score":0.6274669},"labels":[],"label_agreement":null},{"id":"W2090396477","doi":"10.1159/000184093","title":"Staphylococcal Epidermidis Infection of a Hemodialysis Button-Graft Complex Controlled by Vancomycin for 11 Months","year":2008,"lang":"en","type":"article","venue":"˜The œNephron journals/Nephron journals","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Memorial University of Newfoundland","funders":"","keywords":"Medicine; Staphylococcus epidermidis; Vancomycin; Hemodialysis; Surgery; Peritoneal dialysis; Peritonitis; Continuous ambulatory peritoneal dialysis; Dialysis; Transplantation; Staphylococcus aureus","score_opus":0.04985989844983693,"score_gpt":0.3271372432929591,"score_spread":0.27727734484312216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090396477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9292416,0.010244718,0.051606357,0.0046796976,0.0004219434,0.0028647217,0.00020055428,0.000093612325,0.00064678694],"genre_scores_gemma":[0.9886408,0.005692785,0.001278548,0.0015849702,0.0010003494,0.00014144545,0.000045428533,0.00010844555,0.0015072622],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9926173,0.00090867263,0.003013446,0.00069841626,0.001567299,0.0011948361],"domain_scores_gemma":[0.99308753,0.0013827834,0.0021444752,0.0010408276,0.0015332326,0.0008111334],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.004179464,0.0007539916,0.0028414207,0.00055647903,0.0012005254,0.00012399742,0.00048174715,0.00040451682,0.002144742],"category_scores_gemma":[0.00086722046,0.00052405975,0.0022340992,0.00090155913,0.0006927405,0.00050965813,0.00008727132,0.0011159813,0.00003569302],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014154158,0.0026705354,0.39279473,0.00048518018,0.003136356,0.00017585878,0.0015048757,0.00054955255,0.31731614,0.000081022496,0.25288904,0.014242532],"study_design_scores_gemma":[0.064679906,0.003537305,0.7237434,0.0014588241,0.0039640437,0.0023522638,0.0015146974,0.008298909,0.016104415,0.0030598128,0.16941182,0.0018746463],"about_ca_topic_score_codex":0.00044481363,"about_ca_topic_score_gemma":0.0009798281,"teacher_disagreement_score":0.33094862,"about_ca_system_score_codex":0.00047691062,"about_ca_system_score_gemma":0.0006297996,"threshold_uncertainty_score":0.9997211},"labels":[],"label_agreement":null},{"id":"W2090775633","doi":"10.1111/j.1462-5822.2006.00784.x","title":"Candida albicans protein kinase CK2 governs virulence during oropharyngeal candidiasis","year":2006,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"NIH Clinical Center; National Cancer Institute; National Center for Research Resources; Pfizer Pharmaceuticals; National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; Bristol-Myers Squibb","keywords":"Candida albicans; Virulence; Biology; Microbiology; Corpus albicans; Mutant; In vitro; Gene; Biochemistry","score_opus":0.005011338370156001,"score_gpt":0.20535864118447436,"score_spread":0.20034730281431837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090775633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951196,0.0016152852,0.00017290938,0.00029776327,0.00013177173,0.00053938816,0.000116714094,0.000078453646,0.0019281296],"genre_scores_gemma":[0.9895691,0.000033268967,0.00022815343,0.00015874371,0.00025482487,0.000028277247,0.00021797541,0.000029919465,0.009479733],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998315,0.00009285417,0.00036353746,0.00056192785,0.00008843465,0.0005782947],"domain_scores_gemma":[0.9991685,0.00002859946,0.00010594669,0.00048217629,0.000081206555,0.00013352692],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014824659,0.00024988677,0.00046600014,0.00006866589,0.00016126374,0.000016265103,0.00015138007,0.00022223277,0.0009261429],"category_scores_gemma":[0.00005308098,0.00021891078,0.00016768847,0.00017024721,0.00030030348,0.000064211636,0.00006875024,0.00028984423,0.00019925088],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031185258,0.00015012114,0.044625707,0.00014792624,0.000029223193,0.00043723863,0.00004317708,0.0000015973573,0.9532599,0.00010938822,0.00076177804,0.00012212341],"study_design_scores_gemma":[0.0015659848,0.0002123708,0.07041569,0.00009874316,0.000078936566,0.00010886998,0.00009375448,0.000007954882,0.9149566,0.000052255873,0.012104817,0.0003039772],"about_ca_topic_score_codex":0.0021612449,"about_ca_topic_score_gemma":0.0017648732,"teacher_disagreement_score":0.038303223,"about_ca_system_score_codex":0.00027268066,"about_ca_system_score_gemma":0.00019077373,"threshold_uncertainty_score":0.9999871},"labels":[],"label_agreement":null},{"id":"W2091451478","doi":"10.1097/01.tp.0000065178.93741.72","title":"Changes in the spectrum and risk factors for invasive candidiasis in liver transplant recipients: prospective, multicenter, case-controlled study1","year":2003,"lang":"en","type":"article","venue":"Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":193,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"","keywords":"Invasive candidiasis; Medicine; Liver transplantation; Internal medicine; Transplantation; Antifungal; Dermatology","score_opus":0.022100412298975518,"score_gpt":0.27192483111056537,"score_spread":0.24982441881158984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091451478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99597657,0.00024077314,0.00035687003,0.0000936111,0.000054863387,0.0029942032,0.0001297179,0.000011475798,0.0001419353],"genre_scores_gemma":[0.9954946,0.0040390897,0.00010845813,0.00004713542,0.000015084653,0.0002170797,0.00004094695,0.000010616588,0.000026977945],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99888873,0.00021048401,0.00024499398,0.0002796842,0.00015134999,0.00022476772],"domain_scores_gemma":[0.9990103,0.00073669734,0.00006484776,0.000114373615,0.000029935061,0.00004380409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005217918,0.00015173867,0.00032190362,0.00013345767,0.00008955351,0.000018146198,0.000036091034,0.00007039963,0.000017879576],"category_scores_gemma":[0.0001386257,0.000099467616,0.0000606415,0.00016587632,0.000047150348,0.00010166623,9.0171943e-7,0.00016492388,8.5823194e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0046343934,0.00027852535,0.96388525,0.0001924516,0.00005040749,0.00045301064,0.029944686,0.0000038757084,0.00029808257,0.00007771425,0.0000022760294,0.00017931302],"study_design_scores_gemma":[0.017382428,0.00039484332,0.97169745,0.00015573554,0.00033310722,0.00010006404,0.00649092,0.00012704631,0.0031332325,0.00007071015,0.000004236667,0.000110238],"about_ca_topic_score_codex":0.0016214642,"about_ca_topic_score_gemma":0.17365643,"teacher_disagreement_score":0.17203496,"about_ca_system_score_codex":0.00007668875,"about_ca_system_score_gemma":0.000038215785,"threshold_uncertainty_score":0.8414222},"labels":[],"label_agreement":null},{"id":"W2091507544","doi":"10.1007/s13665-015-0112-x","title":"Management of fungal infections in lung transplant recipients","year":2015,"lang":"en","type":"article","venue":"Current Pulmonology Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"King Faisal Specialist Hospital and Research Centre","keywords":"Medicine; Lung; Lung transplantation; Intensive care medicine; Fungal disease; Immunology; Internal medicine; Dermatology","score_opus":0.040498575854255515,"score_gpt":0.33388478277203243,"score_spread":0.2933862069177769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091507544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99168235,0.0019008298,0.00030418904,0.000114807975,0.0011364723,0.0003797591,0.0000037190348,0.000034517816,0.0044433824],"genre_scores_gemma":[0.9991025,0.0003533596,0.00008898617,0.000008967135,0.000030771465,0.000031628108,0.00003425027,0.000008176058,0.00034141165],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99864995,0.000042096704,0.00055429194,0.00032025928,0.00019623381,0.00023716236],"domain_scores_gemma":[0.99922615,0.000014668912,0.00014815468,0.00039240945,0.00009442978,0.00012415838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004152677,0.00011553273,0.0003182252,0.00015345287,0.000033539887,0.0000022097981,0.000043016837,0.00009098708,0.000033497465],"category_scores_gemma":[0.000050061593,0.000103422724,0.00008514176,0.00024378806,0.00009833104,0.0000620319,0.0000442997,0.00022106929,0.0000067896717],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015450672,0.0007032973,0.99102086,0.0001804763,0.00004423377,0.0016451968,0.00023475022,0.0000064709848,0.0000835837,0.00015976287,0.00039091182,0.005375936],"study_design_scores_gemma":[0.0006578159,0.00013451501,0.99448776,0.00037768422,0.00010730265,0.0005700306,0.0000951073,0.000046278816,0.0002095966,0.0003960206,0.0028227246,0.00009514776],"about_ca_topic_score_codex":0.000022606977,"about_ca_topic_score_gemma":0.00003761127,"teacher_disagreement_score":0.0074201273,"about_ca_system_score_codex":0.00012567829,"about_ca_system_score_gemma":0.000105413994,"threshold_uncertainty_score":0.42174563},"labels":[],"label_agreement":null},{"id":"W2091586814","doi":"10.1007/s11046-007-9028-5","title":"Oral yeast flora and its ITS sequence diversity among a large cohort of medical students in Hainan, China","year":2007,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"College of Science and Engineering, University of Minnesota; National Science Foundation","keywords":"Flora (microbiology); Biology; Carriage; Yeast; Candida albicans; Population; Medical microbiology; Candida tropicalis; Corpus albicans; Microbiology; Oral microbiology; Commensalism; Mainland China; Ribosomal RNA; Internal transcribed spacer; Clade; Zoology; China; Phylogenetics; Gene; Genetics; Bacteria; Demography; Medicine","score_opus":0.02408248985498484,"score_gpt":0.33091746443844716,"score_spread":0.3068349745834623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091586814","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99822086,0.0004400602,0.00013972027,0.000082562954,0.00008870171,0.0003767643,0.000022899203,0.000031528463,0.0005968933],"genre_scores_gemma":[0.999266,0.00015820038,0.00006862417,0.00015365084,0.000027223403,0.0000028104678,0.000010578116,0.000007245664,0.00030565288],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997892,0.00008126427,0.0003150329,0.00035564505,0.0009933236,0.00036270934],"domain_scores_gemma":[0.99938196,0.000040118364,0.000080210826,0.00021500408,0.000089953886,0.00019272645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0038903332,0.00013627963,0.0004139814,0.000095750635,0.000088342036,0.000008487091,0.00027096135,0.00022263065,0.0001310683],"category_scores_gemma":[0.0009649705,0.000113555114,0.00005187754,0.00024985828,0.00016866122,0.00010278489,0.00058658293,0.00035914883,0.000015024862],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024760628,0.0002852161,0.9940335,0.00011650218,0.000010387415,0.0020161988,0.0005152095,1.3815857e-7,0.0022364196,0.0001731874,0.000059312926,0.00030631124],"study_design_scores_gemma":[0.001214394,0.00017304436,0.9969542,0.00018037012,0.000031321943,0.000036972655,0.00027057508,0.000098995675,0.0008986101,0.000022152675,0.000021579557,0.00009779798],"about_ca_topic_score_codex":0.000114188195,"about_ca_topic_score_gemma":0.00061032956,"teacher_disagreement_score":0.0029253627,"about_ca_system_score_codex":0.00008185423,"about_ca_system_score_gemma":0.0000645802,"threshold_uncertainty_score":0.4630643},"labels":[],"label_agreement":null},{"id":"W2091674428","doi":"10.1503/cmaj.080993","title":"Gold medals, vitamin V and miscreant sports","year":2008,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Aspergilloma; Medicine; Aspergillosis; Chest radiograph; Aspergillus fumigatus; Tuberculosis; Itraconazole; Bronchoscopy; Surgery; Lung; Internal medicine; Dermatology; Pathology; Immunology; Antifungal","score_opus":0.008633713791438829,"score_gpt":0.23122498059442564,"score_spread":0.22259126680298683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091674428","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9674818,0.00047913537,0.00002750816,0.022313565,0.00024672635,0.0000815686,0.000008617741,0.000013559945,0.0093475375],"genre_scores_gemma":[0.9859837,0.0010158321,0.00013408989,0.0073288344,0.0007433637,0.000001159265,0.000005884021,0.000009963745,0.0047771204],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978042,0.000060423135,0.00032997664,0.00014897305,0.0012805256,0.0003758534],"domain_scores_gemma":[0.9972404,0.00008419007,0.000107754364,0.00009472494,0.00025187532,0.0022210397],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011537254,0.00009534909,0.00025064408,0.000102935934,0.00020756153,0.000018615458,0.00006185246,0.00027634404,0.0022219813],"category_scores_gemma":[0.0019664052,0.00007939175,0.00007879719,0.00012375171,0.000081073325,0.000074858464,0.000007522574,0.00067473715,0.000041867614],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018809023,0.000027199203,0.862143,0.000010240052,0.00004243677,0.0033411772,0.00019530646,5.56657e-8,0.000054512362,0.00007300978,0.12246247,0.011631791],"study_design_scores_gemma":[0.00074534817,0.00004957445,0.82570416,0.000073076604,0.000024853302,0.0023282561,0.00023474722,0.000028793207,0.00002301859,0.000051194307,0.17065224,0.00008474554],"about_ca_topic_score_codex":0.0011512077,"about_ca_topic_score_gemma":0.010740576,"teacher_disagreement_score":0.04818977,"about_ca_system_score_codex":0.0005250872,"about_ca_system_score_gemma":0.0026424173,"threshold_uncertainty_score":0.9986901},"labels":[],"label_agreement":null},{"id":"W2092806983","doi":"10.1016/j.chembiol.2007.09.009","title":"Mechanism-of-Action Determination of GMP Synthase Inhibitors and Target Validation in Candida albicans and Aspergillus fumigatus","year":2007,"lang":"en","type":"article","venue":"Chemistry & Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":83,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Genome Canada","keywords":"Aspergillus fumigatus; Candida albicans; Biology; ATP synthase; Antifungal drug; Biochemistry; Mechanism of action; Enzyme; Microbiology; In vitro","score_opus":0.01540254954573374,"score_gpt":0.29809216164978075,"score_spread":0.28268961210404703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092806983","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978239,0.00022472063,0.0013180714,0.000058026202,0.00003559308,0.00009578337,0.000010011787,0.0000066967423,0.00042720613],"genre_scores_gemma":[0.999373,0.000101433565,0.00036094434,0.000015712687,0.000035355744,0.0000022807014,0.00005299441,0.0000043389196,0.00005394977],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999385,0.000015354693,0.00025111876,0.0001799055,0.000053205218,0.000115442956],"domain_scores_gemma":[0.99961776,0.000065045395,0.00010390083,0.00009998964,0.000059675483,0.000053655192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027626165,0.00007546514,0.00020503132,0.000037677997,0.000017042055,0.0000013589541,0.000019150018,0.00016341235,0.000044528322],"category_scores_gemma":[0.00019013703,0.00006902185,0.000022255377,0.0000791836,0.00015363727,0.000029367395,0.000014484559,0.000084945576,1.6463034e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018887407,0.00004154428,0.11300983,0.00021608926,0.000005105917,0.000004341531,0.000095298485,1.0236385e-7,0.88201976,0.000042833537,0.000002366615,0.0043738754],"study_design_scores_gemma":[0.00048508498,0.0000999402,0.04336599,0.000054057302,0.000018007453,0.000013734175,0.00035970594,0.00007069251,0.9550241,0.00037388137,0.00007955497,0.000055229142],"about_ca_topic_score_codex":0.00012732287,"about_ca_topic_score_gemma":0.000056195702,"teacher_disagreement_score":0.07300439,"about_ca_system_score_codex":0.000047019163,"about_ca_system_score_gemma":0.00004022009,"threshold_uncertainty_score":0.28146294},"labels":[],"label_agreement":null},{"id":"W2093208243","doi":"10.1016/j.humpath.2015.02.010","title":"Loss of ADAM17 is associated with severe multiorgan dysfunction","year":2015,"lang":"en","type":"article","venue":"Human Pathology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; California Institute of Regenerative Medicine","keywords":"Frameshift mutation; Medicine; Proband; Rash; Exome sequencing; Immunology; Diarrhea; Sepsis; Exome; Mutation; Pathology; Dermatology; Biology; Genetics","score_opus":0.04198290441621564,"score_gpt":0.29439132934429807,"score_spread":0.2524084249280824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093208243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99411273,0.00006389325,0.00013934015,0.0001403098,0.000055262222,0.00014564536,0.000013030543,0.000043118944,0.005286683],"genre_scores_gemma":[0.9955456,0.0000031239226,0.00011599261,0.00029640362,0.00004231232,0.000003828707,0.00004849239,0.000013369617,0.0039308295],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991837,0.00006608343,0.000187507,0.00021357094,0.00018523337,0.00016387668],"domain_scores_gemma":[0.9992126,0.00002421825,0.00010745342,0.00027178854,0.0002953647,0.00008854929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025730304,0.000094793606,0.00029394735,0.000048652386,0.000044054654,0.0000025223555,0.00004462294,0.00013305739,0.00021717366],"category_scores_gemma":[0.00018806724,0.000073514064,0.000044095515,0.0001035127,0.00019944945,0.000041638254,0.00001828949,0.00014310543,0.000034553217],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048553807,0.00030944796,0.9798254,0.0000424744,0.000052198313,0.00034729688,0.0015298447,0.000001421508,0.0132234385,0.000219195,0.0036300973,0.0003336722],"study_design_scores_gemma":[0.0031031508,0.0013696025,0.9912462,0.00006634431,0.00009859031,0.00014459866,0.0005888791,0.000012127271,0.0025207687,0.00037600947,0.000364542,0.000109184526],"about_ca_topic_score_codex":0.00002260619,"about_ca_topic_score_gemma":0.0002073701,"teacher_disagreement_score":0.011420827,"about_ca_system_score_codex":0.00007398706,"about_ca_system_score_gemma":0.000091318616,"threshold_uncertainty_score":0.29978165},"labels":[],"label_agreement":null},{"id":"W2093482883","doi":"10.1097/01253092-200603001-00165","title":"Risk Factors for Fungal Colonisation and Infection in Burn Patients","year":2006,"lang":"en","type":"article","venue":"Journal of Burn Care & Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Medicine; Incidence (geometry); Colonization; Colonisation; Risk factor; Sepsis; Parenteral nutrition; Prospective cohort study; Antibiotics; Burn center; Intensive care medicine; Internal medicine; Emergency medicine; Poison control; Microbiology","score_opus":0.04052581114930531,"score_gpt":0.37304354138280826,"score_spread":0.33251773023350295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093482883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984518,0.0005466067,0.00011519051,0.000090246154,0.00009192968,0.00037756833,0.00001365086,0.0000034907016,0.00030950748],"genre_scores_gemma":[0.9993152,0.00026169218,0.0000784215,0.0000071117374,0.00018992617,0.0000040674877,0.000012647109,0.000009129038,0.00012181273],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985321,0.0001477941,0.0003555255,0.0001250893,0.0006092044,0.00023025494],"domain_scores_gemma":[0.9979628,0.00031497228,0.00014055076,0.000090661575,0.0014028073,0.0000882531],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011835484,0.000072104085,0.00021813727,0.00031676903,0.00012915187,0.000033906555,0.000039421335,0.000098579505,0.000014329123],"category_scores_gemma":[0.0008771099,0.00005456848,0.00009095378,0.00022376397,0.000080562066,0.00014190079,0.000018410896,0.0004998238,0.0000011926074],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072958315,0.00014749415,0.9933613,0.00011796253,0.000011629566,0.000010622334,0.0007375265,0.00001267518,0.00062036305,0.00001560774,0.00052027375,0.0037149522],"study_design_scores_gemma":[0.0018516909,0.0014646922,0.9927409,0.00009819174,0.000023051634,0.0000046063415,0.0012370694,0.00003975172,0.0010644337,0.00032955687,0.001100526,0.00004550475],"about_ca_topic_score_codex":0.0010434396,"about_ca_topic_score_gemma":0.001193993,"teacher_disagreement_score":0.0036694475,"about_ca_system_score_codex":0.00040157555,"about_ca_system_score_gemma":0.00017466831,"threshold_uncertainty_score":0.22252381},"labels":[],"label_agreement":null},{"id":"W2093682425","doi":"10.1016/j.femsle.2005.08.016","title":"A rapid screening test to distinguish between<i>Candida albicans</i>and<i>Candida dubliniensis</i>using NMR spectroscopy","year":2005,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; National Research Council Institute for Biodiagnostics","funders":"","keywords":"Candida dubliniensis; Candida albicans; Nuclear magnetic resonance spectroscopy; Metabolite; Biology; Microbiology; Computational biology; Corpus albicans; Chemistry; Biochemistry; Stereochemistry","score_opus":0.021408822724343975,"score_gpt":0.2777495313155692,"score_spread":0.2563407085912252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093682425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9815889,0.00042160167,0.0047397683,0.011995697,0.00015674495,0.00051618565,0.0001369382,0.00012847931,0.00031565578],"genre_scores_gemma":[0.9569729,0.000029891702,0.020666748,0.02074263,0.0011914034,0.00000995545,0.00013265821,0.000049770286,0.00020401744],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9974736,0.000094149655,0.0005697774,0.0008512477,0.000121311066,0.00088991894],"domain_scores_gemma":[0.99852455,0.00035826603,0.00016018833,0.00050571194,0.00009349817,0.00035776477],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00045754327,0.0003902829,0.0007723417,0.00020749534,0.00029375526,0.00004837042,0.00018459708,0.0002026649,0.00018350472],"category_scores_gemma":[0.00047500245,0.00035562718,0.00017441993,0.0003441234,0.0004617483,0.00009026524,0.00013193555,0.00051665667,0.00007083468],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015255257,0.000046058136,0.34152362,0.000025365312,0.00006744139,0.0000350816,0.00022783066,0.000005692301,0.64888906,0.0000031396228,0.006480212,0.0025439328],"study_design_scores_gemma":[0.0058292574,0.0012591485,0.64974725,0.00078642997,0.00066549703,0.00060410623,0.00042063175,0.00016318147,0.119428,0.000014602862,0.21947004,0.0016118829],"about_ca_topic_score_codex":0.00019277158,"about_ca_topic_score_gemma":0.0001940717,"teacher_disagreement_score":0.5294611,"about_ca_system_score_codex":0.00018508792,"about_ca_system_score_gemma":0.00008929919,"threshold_uncertainty_score":0.99988955},"labels":[],"label_agreement":null},{"id":"W2093873217","doi":"10.1345/aph.1d292","title":"Caspofungin and amphotericin B for disseminated <i>Fusarium verticillioides</i> in leukemia","year":2005,"lang":"en","type":"letter","venue":"Annals of Pharmacotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Hospital and Health Sciences Centre; University of British Columbia","funders":"","keywords":"Caspofungin; Medicine; Amphotericin B; Fusarium; Voriconazole; Fungi imperfecti; Leukemia; Microbiology; Antifungal; Dermatology; Internal medicine; Biology; Botany","score_opus":0.07065881846369487,"score_gpt":0.3954583130583693,"score_spread":0.32479949459467444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093873217","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.614391,0.012226706,0.00010441511,0.37020764,0.00023856385,0.0018323036,0.00045414374,0.00006229884,0.0004829222],"genre_scores_gemma":[0.28647444,0.012311188,0.00029371542,0.6945013,0.0013113064,0.0000839463,0.00034920863,0.00011445736,0.0045604534],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979158,0.00006649368,0.0006292076,0.00052268535,0.00031008263,0.0005557319],"domain_scores_gemma":[0.998849,0.00027944575,0.00020432913,0.00033945937,0.00022486308,0.00010292283],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00040501583,0.00038341232,0.0009334655,0.00025851352,0.000034120654,0.000015267498,0.00014688015,0.00047438627,0.00015631066],"category_scores_gemma":[0.000057046884,0.00033840456,0.00025426957,0.00023189696,0.00015809413,0.00009075527,0.000016838658,0.00078369287,0.00000447526],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013961109,0.00009599629,0.002540844,0.00093355495,0.00014908834,0.00014038837,0.00023664217,0.0000022378729,0.300604,0.0000036735164,0.6832142,0.0106832655],"study_design_scores_gemma":[0.0025354258,0.00038543934,0.004543809,0.0004396713,0.00010268489,0.000013791847,0.000027548866,0.00030189284,0.31901568,0.000068358866,0.67221594,0.00034977862],"about_ca_topic_score_codex":0.00016981113,"about_ca_topic_score_gemma":0.00002368631,"teacher_disagreement_score":0.3279166,"about_ca_system_score_codex":0.00009405844,"about_ca_system_score_gemma":0.00022031998,"threshold_uncertainty_score":0.9999068},"labels":[],"label_agreement":null},{"id":"W2093938305","doi":"10.1097/inf.0b013e318067b4d1","title":"EFFICACY AND SAFETY OF CASPOFUNGIN FOR THE EMPIRIC MANAGEMENT OF FEVER IN NEUTROPENIC CHILDREN","year":2007,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Caspofungin; Concomitant; Rash; Neutropenia; Medicine; Adverse effect; Hypokalemia; Febrile neutropenia; Internal medicine; Intensive care medicine; Chemotherapy; Dermatology; Antifungal; Voriconazole","score_opus":0.010054185192472493,"score_gpt":0.2861125319024369,"score_spread":0.27605834670996443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093938305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994182,0.0033422483,0.0010578955,0.00026685512,0.00008996257,0.00084116485,0.0000116148,0.000006274952,0.00020196938],"genre_scores_gemma":[0.99600303,0.003491701,0.000038777933,0.00009180476,0.00026864343,0.000004424326,0.0000015321825,0.000010571579,0.00008951802],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99894893,0.0000491773,0.00043092537,0.00011549493,0.00023400063,0.00022145988],"domain_scores_gemma":[0.9989405,0.0004173639,0.00019910501,0.00023072722,0.00009207015,0.00012017662],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00131098,0.000103028964,0.00021098668,0.00011968047,0.00014547289,0.000008762578,0.00010253275,0.00003076387,0.000032527554],"category_scores_gemma":[0.00011536254,0.000055493354,0.00014431016,0.0003290716,0.000085265485,0.000042182142,0.000042254946,0.00022246625,0.0000012521697],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022605078,0.00025700187,0.99292487,0.00015335652,0.00011829217,0.000017290795,0.00012968079,0.00008699322,0.000016879676,0.00010858666,0.00023775938,0.0036887594],"study_design_scores_gemma":[0.0030860077,0.00012614389,0.9954082,0.0000334414,0.0008328455,0.00006303731,0.00010930263,0.000027614184,0.00000879288,0.00020898985,0.000040144325,0.000055513134],"about_ca_topic_score_codex":0.000025206647,"about_ca_topic_score_gemma":0.000021884089,"teacher_disagreement_score":0.0036332463,"about_ca_system_score_codex":0.00006328669,"about_ca_system_score_gemma":0.00010321132,"threshold_uncertainty_score":0.22629534},"labels":[],"label_agreement":null},{"id":"W2094285560","doi":"10.1371/journal.ppat.0030092","title":"Genome-Wide Fitness Test and Mechanism-of-Action Studies of Inhibitory Compounds in Candida albicans","year":2007,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":255,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Institute for Research in Immunology and Cancer; Concordia University; Université de Montréal; Merck Canada Inc. (Canada)","funders":"Genome Canada","keywords":"Candida albicans; Biology; Genetic screen; Antifungal drug; Corpus albicans; Genetics; Population; Mechanism of action; Haploinsufficiency; Computational biology; Gene; Mutant; Phenotype","score_opus":0.05373098964700297,"score_gpt":0.3128685775601802,"score_spread":0.25913758791317726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094285560","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979148,0.0009252942,0.00013571163,0.0000565276,0.000054786473,0.00024049183,0.00003183253,0.000013897513,0.0006266959],"genre_scores_gemma":[0.99907666,0.0003621414,0.0003132124,0.000044875465,0.000044931625,0.0000048828333,0.000008625925,0.000011450476,0.00013322358],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998993,0.000025994901,0.00037808702,0.00020063948,0.00021744469,0.00018483307],"domain_scores_gemma":[0.9991164,0.00034648544,0.000112439935,0.00018863627,0.0001659222,0.000070075585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041995198,0.00010985238,0.00041470444,0.00012391094,0.00003726912,0.0000018760702,0.000034651395,0.00007068504,0.000015462627],"category_scores_gemma":[0.00044990392,0.00009627793,0.00004879628,0.00019312295,0.0001820864,0.00004118211,0.000031070715,0.000115183335,0.0000012152151],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010393338,0.00018744811,0.50591403,0.00033065327,0.000030975283,0.000028744289,0.00080322963,3.5312067e-7,0.4923675,0.000040969888,0.0000052698315,0.0001868457],"study_design_scores_gemma":[0.00061631395,0.00031575613,0.8625847,0.00021082623,0.00008250266,0.0000047288922,0.0044254637,0.000017898152,0.13140796,0.00019961283,0.000043655564,0.00009055712],"about_ca_topic_score_codex":0.00005361367,"about_ca_topic_score_gemma":0.0012102539,"teacher_disagreement_score":0.36095956,"about_ca_system_score_codex":0.000097219985,"about_ca_system_score_gemma":0.00006593167,"threshold_uncertainty_score":0.39261},"labels":[],"label_agreement":null},{"id":"W2094437868","doi":"10.1111/j.1399-3062.2008.00349.x","title":"Micafungin alone or in combination with other systemic antifungal therapies in hematopoietic stem cell transplant recipients with invasive aspergillosis","year":2008,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Micafungin; Medicine; Refractory (planetary science); Internal medicine; Aspergillosis; Hematopoietic stem cell transplantation; Gastroenterology; Transplantation; Toxicity; Population; Combination therapy; Voriconazole; Immunology; Antifungal; Dermatology","score_opus":0.014599439231426805,"score_gpt":0.22335496444091144,"score_spread":0.20875552520948462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094437868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967497,0.0007210446,0.0003735685,0.00010184564,0.00004961108,0.0013564731,0.00015553567,0.00011324077,0.00037898007],"genre_scores_gemma":[0.997894,0.0012546355,0.00002854703,0.00019125857,0.00001804025,0.00013637188,0.00008192321,0.00005938027,0.0003358404],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977374,0.0001834429,0.0005176304,0.0005741329,0.00051826343,0.00046914446],"domain_scores_gemma":[0.9989649,0.00018364981,0.0001140863,0.0003769899,0.00008558384,0.00027476888],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00020151732,0.00038547852,0.0006675242,0.0003206164,0.00011304679,0.000016860668,0.00010703494,0.0001224772,0.00009995911],"category_scores_gemma":[0.0000059204003,0.0002571724,0.0001041199,0.0005924071,0.00018256536,0.00018578296,0.0000044174176,0.00031361202,0.000025686282],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012847327,0.0021019187,0.9700669,0.0013393657,0.00009240314,0.0031386705,0.0059349565,0.00011476787,0.004276079,0.000034447974,0.0000119569795,0.000041230236],"study_design_scores_gemma":[0.011562753,0.0012363131,0.9771176,0.0043928735,0.00029401455,0.00075050263,0.00054162554,0.00008006846,0.0035263877,0.000015311696,0.000009143873,0.0004733938],"about_ca_topic_score_codex":0.00035155253,"about_ca_topic_score_gemma":0.0032731157,"teacher_disagreement_score":0.007050736,"about_ca_system_score_codex":0.0002218339,"about_ca_system_score_gemma":0.00040502078,"threshold_uncertainty_score":0.9999881},"labels":[],"label_agreement":null},{"id":"W2094913725","doi":"10.1016/j.fgb.2006.01.002","title":"The long hard road to a completed Candida albicans genome","year":2006,"lang":"en","type":"review","venue":"Fungal Genetics and Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Biology; Candida albicans; Genome; Genome project; Annotation; Computational biology; Whole genome sequencing; Genomics; Sequence assembly; Comparative genomics; Genetics; Gene","score_opus":0.08609136359558156,"score_gpt":0.3648346670897249,"score_spread":0.27874330349414334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094913725","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002791095,0.99456966,0.00009669312,0.00016495374,0.00020921073,0.00094155385,0.000311484,0.00002052429,0.00089482113],"genre_scores_gemma":[0.0028543812,0.99264187,0.00012764239,0.00023470126,0.00044475246,0.00007460889,0.00035349154,0.00003147973,0.0032370612],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99816453,0.00015481444,0.0005424562,0.00054667704,0.00010163897,0.00048990647],"domain_scores_gemma":[0.9988726,0.00015239927,0.0001382791,0.0005213904,0.00009835112,0.00021698239],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027165737,0.000351291,0.0012688886,0.00007482094,0.00021793722,0.000035945504,0.00020479847,0.00035169235,0.00005842969],"category_scores_gemma":[0.000063444735,0.00019703622,0.00026695424,0.00019776062,0.00026300584,0.0000044820904,0.00013947219,0.0003492228,0.00005182627],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005275383,0.00003763538,0.005731093,0.0016480343,0.00019032293,0.000027638329,0.000016130192,1.5335111e-7,0.000060874863,0.00011471262,0.0012999774,0.99082065],"study_design_scores_gemma":[0.0001579574,0.00042098138,0.03999009,0.00043316942,0.00040802764,0.000059959224,0.0000067943292,0.0000043277346,5.685005e-7,0.000026085618,0.9582749,0.00021715261],"about_ca_topic_score_codex":0.00018187777,"about_ca_topic_score_gemma":0.0010588495,"teacher_disagreement_score":0.9906035,"about_ca_system_score_codex":0.000074073214,"about_ca_system_score_gemma":0.0002668126,"threshold_uncertainty_score":0.8034904},"labels":[],"label_agreement":null},{"id":"W2095708480","doi":"10.1016/j.jcrc.2006.11.003","title":"Isolation of Candida species from critically ill patients","year":2007,"lang":"en","type":"letter","venue":"Journal of Critical Care","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Health Services; University of Calgary","funders":"","keywords":"Critically ill; Medicine; Isolation (microbiology); Intensive care medicine; Microbiology; Biology","score_opus":0.022398012133402496,"score_gpt":0.314469067826808,"score_spread":0.2920710556934055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095708480","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3926407,0.004476342,0.0046065105,0.57802457,0.002574732,0.00042914593,0.0011385477,0.000023260029,0.016086157],"genre_scores_gemma":[0.7426583,0.000014868648,0.002197514,0.25149205,0.003257845,3.9712128e-7,0.00014224755,0.000026315458,0.00021045384],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99711585,0.00006091077,0.0010050873,0.00020497294,0.0012945401,0.00031861968],"domain_scores_gemma":[0.9870469,0.0007267266,0.0002106437,0.00027057488,0.011560018,0.00018515834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017097412,0.0002199302,0.0008543024,0.00017724275,0.00004080528,0.000022215003,0.00014939472,0.00065611163,0.0007335955],"category_scores_gemma":[0.0074294847,0.00017239175,0.00046123503,0.00009494349,0.00038895704,0.000116510855,0.00002878941,0.0018047924,0.000008838143],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016889505,0.00044068712,0.18321776,0.005922185,0.00015304195,0.0031277079,0.00093086465,2.1912807e-7,0.0015560772,0.00017188139,0.80162996,0.0011606427],"study_design_scores_gemma":[0.004677581,0.005215661,0.7085909,0.0037321951,0.0035142594,0.00008965358,0.0057782363,0.0000079822485,0.0033914095,0.0022199836,0.2618901,0.00089198584],"about_ca_topic_score_codex":0.00003002132,"about_ca_topic_score_gemma":0.000018053217,"teacher_disagreement_score":0.53973985,"about_ca_system_score_codex":0.0002531334,"about_ca_system_score_gemma":0.00029471706,"threshold_uncertainty_score":0.88943243},"labels":[],"label_agreement":null},{"id":"W2095744468","doi":"10.1139/w10-117","title":"Curcumin as a promising anticandidal of clinical interest","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":149,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Curcumin; Fluconazole; Ergosterol; Candida glabrata; Candida albicans; Minimum inhibitory concentration; Microbiology; Biology; In vitro; Biochemistry; Chemistry; Antifungal","score_opus":0.11372145344845663,"score_gpt":0.34958648293248246,"score_spread":0.23586502948402582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095744468","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99634844,0.00044686394,0.00006884444,0.00025273993,0.00037589204,0.0000783961,0.000012663727,0.0000016393855,0.0024145201],"genre_scores_gemma":[0.9986002,0.000017419354,0.0007270796,0.00031599103,0.000118897085,1.4017677e-7,0.0000026615655,0.0000075134417,0.00021010586],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99878615,0.00010107526,0.0007476761,0.000114763265,0.000025260668,0.0002250569],"domain_scores_gemma":[0.99876994,0.000062814375,0.00030840884,0.00015698111,0.00026130406,0.00044056363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006914675,0.00008006695,0.0005093672,0.00014829407,0.00002716722,0.00000283343,0.00013175559,0.00015203445,0.00080679177],"category_scores_gemma":[0.0008062757,0.00006143357,0.00020570908,0.00007129619,0.0005096335,0.00003377536,0.000008822002,0.00033402778,0.00002204661],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007063306,0.00008642495,0.88726246,0.000049920505,0.0001412609,0.00069166796,0.0006425116,2.0908786e-8,0.104214974,0.00036125517,0.0025162897,0.0033268563],"study_design_scores_gemma":[0.0035115636,0.0048417435,0.89222807,0.0007774371,0.00029169783,0.0057676565,0.0012921002,0.0000018926372,0.06333544,0.0006770416,0.02703593,0.00023941793],"about_ca_topic_score_codex":0.0015603859,"about_ca_topic_score_gemma":0.010222915,"teacher_disagreement_score":0.040879536,"about_ca_system_score_codex":0.00004527698,"about_ca_system_score_gemma":0.0022474397,"threshold_uncertainty_score":0.8833804},"labels":[],"label_agreement":null},{"id":"W2096308348","doi":"10.3109/13693786.2012.738312","title":"Global burden of allergic bronchopulmonary aspergillosis with asthma and its complication chronic pulmonary aspergillosis in adults","year":2012,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":489,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"National Institutes of Health; University of Delhi","keywords":"Allergic bronchopulmonary aspergillosis; Medicine; Asthma; Aspergillosis; Population; Pediatrics; Intensive care medicine; Immunology; Environmental health","score_opus":0.010153552697364971,"score_gpt":0.271582252729649,"score_spread":0.261428700032284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096308348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98456514,0.0079515325,0.000037337773,0.0026159198,0.00008587378,0.00045033568,0.000014514617,0.000031741805,0.0042475997],"genre_scores_gemma":[0.99786854,0.0012203836,0.0001457703,0.00029413687,0.00026130065,0.000048930935,0.000046137913,0.000015465417,0.00009931344],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979349,0.00014085196,0.0004684115,0.00040118425,0.0005401881,0.00051446987],"domain_scores_gemma":[0.9988846,0.00016017363,0.000112549744,0.00028510016,0.00010456788,0.00045296585],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00043862555,0.00020253148,0.00058254594,0.00009153724,0.00004781901,0.0000022519775,0.00014436051,0.000355992,0.0009605733],"category_scores_gemma":[0.00029716006,0.00015569034,0.0000666283,0.00037970324,0.00035327984,0.00011120815,0.000103739854,0.00028448086,0.000028714348],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020275025,0.0007742328,0.9756026,0.00055621,0.00007727393,0.00014449788,0.00019915162,0.0000072116,0.0016039559,0.001310006,0.00020730542,0.017490007],"study_design_scores_gemma":[0.0016750107,0.00086583686,0.99279165,0.00043164482,0.000044355522,0.00037794426,0.0001892055,0.0018356137,0.000099313635,0.000056839235,0.001482721,0.00014987499],"about_ca_topic_score_codex":0.00032310685,"about_ca_topic_score_gemma":0.0003718952,"teacher_disagreement_score":0.017340131,"about_ca_system_score_codex":0.00028178561,"about_ca_system_score_gemma":0.00023340451,"threshold_uncertainty_score":0.9999527},"labels":[],"label_agreement":null},{"id":"W2096389916","doi":"10.1534/g3.113.010199","title":"Phenotypic Analysis of a Family of Transcriptional Regulators, the Zinc Cluster Proteins, in the Human Fungal Pathogen <i>Candida glabrata</i>","year":2014,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research; Université de Montréal; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Candida glabrata; Biology; Gene cluster; Gene; Genetics; Phenotype; Saccharomyces cerevisiae; Microbiology; Zinc finger; Transcription factor; Candida albicans","score_opus":0.019249887220566968,"score_gpt":0.26644966683531773,"score_spread":0.24719977961475076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096389916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92138153,0.075542524,0.0012246023,0.00028843392,0.000046382087,0.0007333909,0.0001147539,0.000008986947,0.00065936154],"genre_scores_gemma":[0.9955145,0.0027475976,0.0007080123,0.00054839347,0.00013202245,0.000036103072,0.000107644984,0.000019615196,0.00018611253],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99771297,0.00032647885,0.0006982667,0.00034171503,0.0006271758,0.00029338282],"domain_scores_gemma":[0.9984458,0.00010617974,0.0002139468,0.0009889501,0.0001819369,0.00006316777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010951201,0.0002117964,0.0005752694,0.00018307273,0.00011513411,0.000015321177,0.00039254408,0.00012179762,0.00005008504],"category_scores_gemma":[0.000011379874,0.00012801324,0.00035317263,0.000867622,0.00034978476,0.000026311904,0.000048523354,0.00016996505,0.000002817184],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000253191,0.00028127048,0.56845516,0.00022652566,0.0005548797,0.0000032005164,0.0021910553,0.0007545041,0.35961038,0.0014938619,0.000099547855,0.06607641],"study_design_scores_gemma":[0.0010217273,0.00034462984,0.9742327,0.000034358527,0.001364323,0.0000038335597,0.0010019457,0.001023804,0.0040355567,0.00045714705,0.016300112,0.00017990886],"about_ca_topic_score_codex":0.00007421708,"about_ca_topic_score_gemma":0.00084065314,"teacher_disagreement_score":0.40577748,"about_ca_system_score_codex":0.00003846218,"about_ca_system_score_gemma":0.00013035891,"threshold_uncertainty_score":0.52202284},"labels":[],"label_agreement":null},{"id":"W2097297828","doi":"10.1177/1753465811398720","title":"Management of fungal lung disease in the immunocompromised","year":2011,"lang":"en","type":"review","venue":"Therapeutic Advances in Respiratory Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Calgary","funders":"","keywords":"Medicine; Intensive care medicine; Fungal disease; Population; Antifungal; Disease; Lung; Immunology; Dermatology; Internal medicine; Environmental health","score_opus":0.06692709555202371,"score_gpt":0.3908724126531313,"score_spread":0.3239453171011076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097297828","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006857903,0.9941835,0.00003779834,0.000015326204,0.00011358595,0.003242064,0.00006761386,0.000027202428,0.0016271214],"genre_scores_gemma":[0.022980783,0.97577137,0.000025918966,0.00028502115,0.00006029377,0.0006326761,0.000034933688,0.000057216148,0.0001518091],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965851,0.0006341631,0.0011481981,0.00066962384,0.0004971107,0.0004658224],"domain_scores_gemma":[0.9975697,0.00019157627,0.0003908234,0.0015519584,0.000050350118,0.00024562728],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007982794,0.00053463766,0.0014993914,0.00026463694,0.000055953657,0.000012973185,0.0006693325,0.00012086945,0.00015449447],"category_scores_gemma":[0.00003628226,0.00034647604,0.0006380147,0.0006520969,0.00036655448,0.0001661704,0.00009403325,0.00055710645,0.000023177941],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016596272,0.0009802618,0.011023809,0.06218907,0.00014954456,0.0010194299,0.00009703123,0.0000030096248,2.771101e-7,0.002662137,0.0000096337835,0.9202062],"study_design_scores_gemma":[0.0016165035,0.00008803885,0.043926653,0.026072446,0.0022507666,0.0000011768673,0.00016266703,0.00001283735,2.7956128e-7,0.0013068052,0.9240893,0.00047254076],"about_ca_topic_score_codex":0.0000030733954,"about_ca_topic_score_gemma":0.000005784521,"teacher_disagreement_score":0.92407966,"about_ca_system_score_codex":0.00021662274,"about_ca_system_score_gemma":0.00052688504,"threshold_uncertainty_score":0.99989873},"labels":[],"label_agreement":null},{"id":"W2097448593","doi":"10.1016/s0924-8579(02)00240-6","title":"Evaluation of the in vitro activity of caspofungin against bloodstream isolates of Candida species from cancer patients: comparison of Etest and NCCLS reference methods","year":2002,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Etest; Caspofungin; Broth microdilution; Fluconazole; Microbiology; Itraconazole; Candida glabrata; Candida albicans; Candida tropicalis; Amphotericin B; Azole; Biology; Minimum inhibitory concentration; Medicine; Antifungal; Antimicrobial","score_opus":0.08129726397879268,"score_gpt":0.3862070207701236,"score_spread":0.3049097567913309,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097448593","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99867153,0.00030203612,0.00004116034,0.00014917752,0.00024618127,0.00014964801,0.00028148346,7.906908e-7,0.00015796987],"genre_scores_gemma":[0.9988482,0.0003529779,0.00070655596,0.000026516207,0.000033843004,5.251932e-7,0.000008184155,0.000005219395,0.000017979211],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99823534,0.00018339096,0.0007422841,0.00010885248,0.00064892625,0.000081175465],"domain_scores_gemma":[0.99703425,0.00017031208,0.0011315864,0.00011345151,0.0015189147,0.000031500087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006013926,0.00009594365,0.00046069207,0.00013262956,0.000013277453,0.000004763495,0.00018547068,0.00006140146,0.00012792456],"category_scores_gemma":[0.0005099553,0.0000693964,0.00011926667,0.00012030317,0.00015593231,0.00011255295,0.000054677537,0.0001715776,1.5024767e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004523188,0.0006364673,0.44314697,0.00003174898,0.00017514365,6.9064527e-7,0.0005183532,0.00007523619,0.5460631,0.0000011535591,0.00008962769,0.008809163],"study_design_scores_gemma":[0.001217747,0.00007262804,0.50154626,0.00044702354,0.00012765238,8.4629073e-7,0.00006488013,0.0008548836,0.49561572,0.000011864769,0.000010995397,0.000029492005],"about_ca_topic_score_codex":0.000889344,"about_ca_topic_score_gemma":0.00032957213,"teacher_disagreement_score":0.058399305,"about_ca_system_score_codex":0.00012639511,"about_ca_system_score_gemma":0.00012302697,"threshold_uncertainty_score":0.2829903},"labels":[],"label_agreement":null},{"id":"W2098861121","doi":"10.1091/mbc.e05-07-0617","title":"The<i>Aspergillus fumigatus</i>StuA Protein Governs the Up-Regulation of a Discrete Transcriptional Program during the Acquisition of Developmental Competence","year":2005,"lang":"en","type":"article","venue":"Molecular Biology of the Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":132,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Burroughs Wellcome Fund","keywords":"Biology; Competence (human resources); Aspergillus fumigatus; Transcriptional regulation; Fungal protein; Cell biology; Genetics; Computational biology; Transcription factor; Microbiology; Gene; Saccharomyces cerevisiae","score_opus":0.006018927513851381,"score_gpt":0.24124006758649957,"score_spread":0.2352211400726482,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098861121","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952894,0.00080984854,0.00035087,0.0020499704,0.0000483492,0.00094682915,0.000030847692,0.00000875528,0.00046514542],"genre_scores_gemma":[0.998756,0.000026086409,0.0005906134,0.000075286116,0.000023686163,0.000035990946,0.00001758212,0.0000075949742,0.0004671652],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99890786,0.00018466415,0.00033817528,0.00015910268,0.00024187827,0.00016834265],"domain_scores_gemma":[0.99928486,0.000049187012,0.00020805465,0.00033296662,0.00010313397,0.000021788344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035717682,0.00011027291,0.00017770183,0.000013107464,0.00018638402,0.0000040064333,0.00027482418,0.000072793715,0.00002769453],"category_scores_gemma":[0.000040117335,0.00004808128,0.00019086037,0.00012686431,0.00088188815,0.00002254542,0.00006220979,0.00014487865,0.0000017303129],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035189866,0.00008705607,0.0072972826,0.00006737458,0.000051069073,2.8877866e-7,0.00030019015,0.000029524812,0.9894796,0.0015227592,0.000009289637,0.000803688],"study_design_scores_gemma":[0.0004694503,0.00012103481,0.24338569,0.00006175896,0.00004160973,0.0000056708673,0.0002719655,0.00012198795,0.7544689,0.00030384134,0.00070047384,0.00004759967],"about_ca_topic_score_codex":0.000029845782,"about_ca_topic_score_gemma":0.000070449,"teacher_disagreement_score":0.23608841,"about_ca_system_score_codex":0.000051984425,"about_ca_system_score_gemma":0.00008366657,"threshold_uncertainty_score":0.32493538},"labels":[],"label_agreement":null},{"id":"W2099054352","doi":"10.1111/j.1365-2958.2007.05788.x","title":"Deletion of the high‐affinity cAMP phosphodiesterase encoded by <i>PDE2</i> affects stress responses and virulence in <i>Candida albicans</i>","year":2007,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre","funders":"Biotechnology and Biological Sciences Research Council; Deutsche Forschungsgemeinschaft; Pfizer","keywords":"Biology; Virulence; Candida albicans; Transcriptome; Mutant; Corpus albicans; Phosphodiesterase; Gene; Cell biology; Saccharomyces cerevisiae; Transcription (linguistics); Microbiology; Genetics; Gene expression; Biochemistry; Enzyme","score_opus":0.003410521302524117,"score_gpt":0.2288623472621746,"score_spread":0.2254518259596505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099054352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966735,0.0017025428,0.000597983,0.00031617386,0.000082686754,0.00036762157,0.00011647605,0.000012401257,0.00013057608],"genre_scores_gemma":[0.99825305,0.0001159202,0.0001879904,0.0012445962,0.0000081682865,0.0000055251253,0.000040370785,0.0000109391995,0.00013344319],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987764,0.00024343358,0.0002741305,0.0003321066,0.00007451936,0.00029944754],"domain_scores_gemma":[0.9991868,0.00022474886,0.00010940384,0.00035557046,0.000059709542,0.00006376726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005356025,0.00015463693,0.0003285097,0.00005532139,0.000050083556,0.0000048118427,0.00011563548,0.00016910116,0.000022204462],"category_scores_gemma":[0.00026333053,0.000113603266,0.00006787078,0.00019534207,0.00042681716,0.00002563446,0.000074912874,0.00022730099,0.0000021608614],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009456334,0.00011489175,0.12817529,0.000064695094,0.000014895105,0.00005428814,0.00012733332,0.0000010914139,0.86975795,0.000056018715,0.00024557402,0.00044233934],"study_design_scores_gemma":[0.0010106044,0.00020321933,0.082967594,0.00012358578,0.00002962904,0.000035666133,0.000098604025,0.0000015485604,0.9144869,0.000037518632,0.0008998844,0.00010524038],"about_ca_topic_score_codex":0.00035992594,"about_ca_topic_score_gemma":0.0010980787,"teacher_disagreement_score":0.045207687,"about_ca_system_score_codex":0.000060140603,"about_ca_system_score_gemma":0.00007598379,"threshold_uncertainty_score":0.46326068},"labels":[],"label_agreement":null},{"id":"W2099136629","doi":"10.1093/cid/ciu215","title":"CARD9 Deficiency and Spontaneous Central Nervous System Candidiasis: Complete Clinical Remission With GM-CSF Therapy","year":2014,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":170,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University and Génome Québec Innovation Centre; McGill University; Centre Hospitalier de l’Université de Montréal; McGill University Health Centre","funders":"Fondation du Grand défi Pierre Lavoie; Astellas Pharma; McGill University Health Centre; McGill University; CSL Behring","keywords":"Medicine; Meningoencephalitis; Central nervous system; Candida albicans; Immunology; Internal medicine; Genetics; Biology","score_opus":0.03593859056018066,"score_gpt":0.33453684155837554,"score_spread":0.29859825099819487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099136629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99386626,0.0016989653,0.00044493427,0.00018113836,0.00047323934,0.0005987466,0.000033405624,0.00030983327,0.0023934694],"genre_scores_gemma":[0.9968542,0.0012388878,0.000039952392,0.00096389966,0.00069318095,0.000016503876,0.00003143902,0.000037211994,0.00012471684],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99672663,0.00060471124,0.0009805439,0.0007941505,0.00038337108,0.00051060703],"domain_scores_gemma":[0.9965211,0.0013089944,0.00024235585,0.000677828,0.00022517556,0.0010245158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081711117,0.00029946736,0.0010192643,0.000049668175,0.00026629353,0.00007127762,0.0001127626,0.00023672679,0.000048377806],"category_scores_gemma":[0.0015733102,0.00020012491,0.00038961403,0.00016664388,0.00065571564,0.00009071599,0.000050408304,0.00044971946,0.000030116082],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014656477,0.00082752225,0.95253414,0.00021453905,0.00009081102,0.0004762518,0.000024585575,0.0000049302394,0.00001855927,0.00017593268,0.00059709884,0.043569967],"study_design_scores_gemma":[0.0032696929,0.003301088,0.9882241,0.0003349656,0.00033824175,0.00032656116,0.00014231901,0.00044269924,0.0000039698934,0.00006955637,0.0032874923,0.00025932625],"about_ca_topic_score_codex":0.00014650813,"about_ca_topic_score_gemma":0.0001850247,"teacher_disagreement_score":0.043310642,"about_ca_system_score_codex":0.00010135622,"about_ca_system_score_gemma":0.00031435722,"threshold_uncertainty_score":0.8160857},"labels":[],"label_agreement":null},{"id":"W2099179143","doi":"10.1136/adc.2006.094359","title":"Selective fluconazole prophylaxis in high-risk babies to reduce invasive fungal infection","year":2007,"lang":"en","type":"article","venue":"Archives of Disease in Childhood Fetal & Neonatal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Queen's University; Queen's University Belfast","keywords":"Fluconazole; Medicine; Intensive care medicine; Antifungal; Dermatology","score_opus":0.005943293076985334,"score_gpt":0.25208850489774287,"score_spread":0.24614521182075755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099179143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99721736,0.00042944995,0.00019729743,0.0001324449,0.00008813141,0.001090112,0.00013750303,0.000040144547,0.0006675885],"genre_scores_gemma":[0.99896824,0.00011015764,0.0005073459,0.00008714978,0.00012786128,0.000033981152,0.00007625456,0.000028168859,0.00006081129],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99780303,0.00011478185,0.000567529,0.00059149135,0.0003893871,0.00053379365],"domain_scores_gemma":[0.9985981,0.00043459135,0.00012900164,0.00037001853,0.000060489565,0.00040779356],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030541344,0.0002656481,0.0004546647,0.00054164376,0.000079565136,0.000011077472,0.00013787494,0.00007839851,0.00002197328],"category_scores_gemma":[0.0011227595,0.0002514038,0.0002086594,0.0006234516,0.00024668503,0.00024164893,0.00013797666,0.00054567994,0.00001945439],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006157186,0.00102849,0.93718433,0.00020699462,0.00006095614,0.00016238082,0.0031278543,0.000120538796,0.003877951,0.0002856138,0.000007993322,0.047779724],"study_design_scores_gemma":[0.0023852105,0.0009251425,0.9785265,0.00043546257,0.000043389675,0.0000065687705,0.00042036432,0.000022066853,0.0140234195,0.0029683667,0.000014626908,0.00022892008],"about_ca_topic_score_codex":0.0013369586,"about_ca_topic_score_gemma":0.003954029,"teacher_disagreement_score":0.047550805,"about_ca_system_score_codex":0.00010553607,"about_ca_system_score_gemma":0.00042251303,"threshold_uncertainty_score":0.9999938},"labels":[],"label_agreement":null},{"id":"W2099509134","doi":"10.1139/w2012-077","title":"<i>Candida krusei</i>: biotechnological potentials and concerns about its safety","year":2012,"lang":"en","type":"review","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Candida krusei; Fluconazole; Biology; Antifungal; Candida infections; Microbiology","score_opus":0.057760201707238196,"score_gpt":0.31643189997286103,"score_spread":0.25867169826562286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099509134","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011860187,0.9967624,0.000027808954,0.0003013049,0.00058448786,0.0003771817,0.00043593036,0.000009403913,0.00031545543],"genre_scores_gemma":[0.011392841,0.9870726,0.00011061191,0.00032191383,0.0004812397,0.00000194541,0.000067432,0.000032409105,0.0005190097],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977665,0.00021151741,0.001037549,0.00029100335,0.00005583874,0.0006376147],"domain_scores_gemma":[0.99783653,0.00012633378,0.0006521452,0.00028456195,0.0002107073,0.0008897213],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006587171,0.00036524722,0.0024313927,0.00038739856,0.00012740874,0.00002063997,0.0002767188,0.0012066098,0.000691845],"category_scores_gemma":[0.0002987589,0.00024873798,0.00052388676,0.0001835904,0.0006065143,0.00005204219,0.000036707905,0.0011736084,0.00007094782],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010869398,0.000050546874,0.0015479808,0.0068888967,0.000922939,0.0013313824,0.00008228965,4.353771e-8,0.0013489551,0.00055223465,0.0067288685,0.98043716],"study_design_scores_gemma":[0.00036539036,0.00023404641,0.00025922465,0.0039182464,0.0012281088,0.0063113836,0.000027892975,2.6343903e-8,0.000032735163,0.000009999313,0.9873993,0.00021364294],"about_ca_topic_score_codex":0.00025392583,"about_ca_topic_score_gemma":0.0032149898,"teacher_disagreement_score":0.98067045,"about_ca_system_score_codex":0.0003455785,"about_ca_system_score_gemma":0.0031212862,"threshold_uncertainty_score":0.9999965},"labels":[],"label_agreement":null},{"id":"W2099536314","doi":"10.1007/s10096-005-0024-8","title":"International, open-label, noncomparative, clinical trial of micafungin alone and in combination for treatment of newly diagnosed and refractory candidemia","year":2005,"lang":"en","type":"article","venue":"European Journal of Clinical Microbiology & Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":189,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Micafungin; Echinocandin; Refractory (planetary science); Medicine; Candida glabrata; Internal medicine; Adverse effect; Candida albicans; Echinocandins; Candida tropicalis; Gastroenterology; Caspofungin; Amphotericin B; Antifungal; Microbiology; Biology; Dermatology","score_opus":0.09322631934528273,"score_gpt":0.43795014334057375,"score_spread":0.344723823995291,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099536314","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967712,0.001451776,0.00008513862,0.0004950071,0.00037454118,0.0004909287,0.000067115994,0.0000043605887,0.00025989788],"genre_scores_gemma":[0.99358547,0.005128738,0.0006507532,0.00018973948,0.00033694165,0.0000034105726,0.000026843787,0.000011727054,0.00006638747],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965276,0.0009725456,0.0020878569,0.00023931326,0.000053861164,0.000118799464],"domain_scores_gemma":[0.99569756,0.0025509412,0.0011472185,0.00014483267,0.00030147153,0.00015796325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017423857,0.00013379699,0.0011211736,0.00011153878,0.000028158356,0.000010091345,0.00011959961,0.00008294554,0.000022261413],"category_scores_gemma":[0.00272566,0.000099515644,0.00019870953,0.00005964678,0.00047553823,0.000112373666,0.000052039763,0.00016263085,0.0000013362903],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.06967763,0.010414637,0.8573519,0.00003464884,0.00036606492,0.000033123142,0.00006469742,0.0000025633387,0.004046818,0.000015949894,0.0009731605,0.05701883],"study_design_scores_gemma":[0.18236376,0.022290923,0.7797663,0.00018431815,0.0003075105,0.000032281685,0.00003330888,0.000019163492,0.00014421673,0.00003207153,0.014735606,0.000090496294],"about_ca_topic_score_codex":0.0000125887345,"about_ca_topic_score_gemma":0.00007826147,"teacher_disagreement_score":0.11268614,"about_ca_system_score_codex":0.00005293838,"about_ca_system_score_gemma":0.00020018838,"threshold_uncertainty_score":0.405813},"labels":[],"label_agreement":null},{"id":"W2099755706","doi":"10.1099/0022-1317-51-8-677","title":"Aetiology and antifungal susceptibility of yeast bloodstream infections in a Hungarian university hospital between 1996 and 2000","year":2002,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Antifungal; Etiology; Microbiology; Yeast; Medicine; Fungemia; Bloodstream infection; Echinocandins; Biology; Intensive care medicine; Fluconazole; Internal medicine; Genetics; Caspofungin","score_opus":0.011252705184375688,"score_gpt":0.2440336689150329,"score_spread":0.2327809637306572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099755706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99621475,0.0009070336,0.000058424637,0.0024290804,0.00010786284,0.00011371766,0.00003445687,0.0000049829982,0.00012970515],"genre_scores_gemma":[0.99858433,0.0009928783,0.0001653914,0.00006337228,0.000111392896,1.1766084e-7,0.0000052570535,0.000004818184,0.00007244359],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998733,0.00023244992,0.00049999444,0.00020537915,0.000115655705,0.00021353803],"domain_scores_gemma":[0.9990397,0.00025887915,0.0002168986,0.00012880504,0.00011552598,0.0002401547],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008349102,0.000113695685,0.0006256445,0.0001879955,0.000040597926,0.0000029492123,0.00010289724,0.00037130647,0.0004456014],"category_scores_gemma":[0.00073745265,0.000092597096,0.00009478246,0.00016095354,0.00092942576,0.000058632464,0.00007220618,0.0006276047,0.0000025029747],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001059613,0.0004964576,0.9806706,0.000064848464,0.00008129327,0.00013119487,0.00033460913,8.342977e-8,0.013158024,0.000036404133,0.0003928333,0.0045277],"study_design_scores_gemma":[0.0030643998,0.0019346366,0.99122524,0.0001629235,0.00011813262,0.00079857686,0.0005046698,0.000014549773,0.00029109043,0.00005039539,0.001747539,0.0000878584],"about_ca_topic_score_codex":0.00023425119,"about_ca_topic_score_gemma":0.00066601567,"teacher_disagreement_score":0.012866934,"about_ca_system_score_codex":0.000069464506,"about_ca_system_score_gemma":0.00016595847,"threshold_uncertainty_score":0.4879023},"labels":[],"label_agreement":null},{"id":"W2099888509","doi":"10.1139/w10-064","title":"Invasive aspergillosis promotes tumor growth and severity in a tumor-bearing mouse model","year":2010,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Aspergillosis; Immunosurveillance; Aspergillus; Cancer; Biology; Aspergillus fumigatus; Immune system; Flow cytometry; Cancer research; Immunology; Metastasis; Immunosuppression; Tumor microenvironment; Microbiology","score_opus":0.011958369913480916,"score_gpt":0.22432169286257359,"score_spread":0.21236332294909266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099888509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986594,0.00019663315,0.00001806869,0.0005292346,0.00007939107,0.00012214972,0.000034603763,0.0000030741396,0.00035746294],"genre_scores_gemma":[0.99736553,0.00001972827,0.0017646811,0.00069501554,0.000051567447,0.0000010911291,0.000004020921,0.000011233208,0.000087113316],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99913204,0.000041412197,0.00031361642,0.00017082861,0.00003234865,0.00030975995],"domain_scores_gemma":[0.9991311,0.000048107395,0.00011585268,0.00012800813,0.00015354305,0.00042343096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030651287,0.00011711717,0.00036820048,0.00023698049,0.00006063905,0.000013396128,0.00010901479,0.00010177615,0.00004411193],"category_scores_gemma":[0.00066323293,0.00009859988,0.000069611684,0.0000898219,0.00027274768,0.0000802248,0.00001586198,0.00064024207,0.0000024402773],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053937285,0.000020845253,0.38817146,0.00004889357,0.000016974414,0.00021853045,0.00028445054,0.0000017323712,0.6109364,0.00007761006,0.0001288794,0.00004029938],"study_design_scores_gemma":[0.0039576907,0.00082768383,0.66851246,0.00036734546,0.0001424872,0.010092961,0.0010949204,0.00034265942,0.31232485,0.0013068717,0.00043379303,0.00059623073],"about_ca_topic_score_codex":0.0029112925,"about_ca_topic_score_gemma":0.114749365,"teacher_disagreement_score":0.29861152,"about_ca_system_score_codex":0.000084045554,"about_ca_system_score_gemma":0.001599388,"threshold_uncertainty_score":0.90140414},"labels":[],"label_agreement":null},{"id":"W2100008775","doi":"10.1093/jac/dkl555","title":"In vitro susceptibility of Candida species to five antifungal agents in a German university hospital assessed by the reference broth microdilution method and Etest","year":2007,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Gilead Sciences; Valeant Pharmaceuticals International; Pfizer","keywords":"Etest; Broth microdilution; Antifungal; Medicine; Microbiology; Minimum inhibitory concentration; Biology; Antibiotics","score_opus":0.015066279744750968,"score_gpt":0.31143157319035253,"score_spread":0.2963652934456016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100008775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962005,0.00005520554,0.0011934941,0.0019171105,0.00007690996,0.0003392306,0.000039509952,0.0000036359875,0.00017441301],"genre_scores_gemma":[0.99613655,0.00023828768,0.0026089246,0.00061380083,0.00005075396,1.0125796e-7,0.0000047215467,0.0000106605685,0.0003361759],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986286,0.00010091468,0.00053621846,0.00023203096,0.00023233159,0.00026988774],"domain_scores_gemma":[0.9989863,0.00016390585,0.00031614435,0.0001999637,0.00022578619,0.00010788072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014752334,0.00015976057,0.00051327806,0.0002047307,0.000049630107,0.00001582134,0.00017065661,0.000120899924,0.000042808046],"category_scores_gemma":[0.00010512412,0.00012349982,0.00011298974,0.00040983298,0.0001779899,0.00017757245,0.000031361833,0.00040726384,7.9327486e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003974878,0.00045305252,0.11626243,0.0000550867,0.00003100526,0.000060684157,0.0011057437,0.0000016892325,0.874128,0.00000957341,0.003270562,0.00064732315],"study_design_scores_gemma":[0.002358643,0.00031345303,0.55417114,0.0001224454,0.000019738634,0.000031956522,0.00036992878,0.0000073204437,0.44086695,0.000014007352,0.0016241625,0.00010024923],"about_ca_topic_score_codex":0.0005939143,"about_ca_topic_score_gemma":0.0007802848,"teacher_disagreement_score":0.4379087,"about_ca_system_score_codex":0.00028298545,"about_ca_system_score_gemma":0.00017074934,"threshold_uncertainty_score":0.50361764},"labels":[],"label_agreement":null},{"id":"W2100512693","doi":"10.1128/aac.04435-14","title":"Multicenter Evaluation of MIC Distributions for Epidemiologic Cutoff Value Definition To Detect Amphotericin B, Posaconazole, and Itraconazole Resistance among the Most Clinically Relevant Species of Mucorales","year":2015,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec","funders":"","keywords":"Posaconazole; Mucor circinelloides; Mucorales; Rhizopus arrhizus; Itraconazole; Biology; Microbiology; Broth microdilution; Etest; Rhizopus; Amphotericin B; Mucormycosis; Mucor; Medicine; Antifungal; Minimum inhibitory concentration; Aspergillus; Antibiotics; Food science; Pathology","score_opus":0.07906264482070478,"score_gpt":0.34417689679774355,"score_spread":0.26511425197703875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100512693","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932847,0.00017261982,0.0021349795,0.0030546482,0.00006167447,0.000959845,0.00021467237,0.000009888801,0.00010699777],"genre_scores_gemma":[0.9935942,0.0007778368,0.0034949132,0.0018869877,0.00004320144,0.000017108303,0.000077131976,0.000011484331,0.00009711203],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99868697,0.00010775166,0.0005604962,0.0002724167,0.00019088243,0.00018145822],"domain_scores_gemma":[0.9987515,0.00024628083,0.00024801242,0.00021926592,0.0004438588,0.00009108366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013792311,0.00014135754,0.00038981967,0.000034796336,0.000085941356,0.000012479399,0.00007492434,0.000091159876,0.000017177827],"category_scores_gemma":[0.0006657745,0.00009597462,0.00009937166,0.000111691996,0.00033341892,0.000058462785,0.000025057472,0.00008369483,8.9354364e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006050494,0.0005260793,0.68009335,0.00041120444,0.000231983,0.0000020230084,0.0012768307,0.00002538692,0.28499782,0.00045820238,0.018863967,0.0070626326],"study_design_scores_gemma":[0.0033517003,0.00039216437,0.9599025,0.00027369586,0.00020215385,0.0000024330795,0.00031402527,0.0005099516,0.03241856,0.0010621328,0.0014404338,0.00013023298],"about_ca_topic_score_codex":0.00006671223,"about_ca_topic_score_gemma":0.00011651004,"teacher_disagreement_score":0.27980915,"about_ca_system_score_codex":0.000043520904,"about_ca_system_score_gemma":0.00008491787,"threshold_uncertainty_score":0.39137313},"labels":[],"label_agreement":null},{"id":"W2100741623","doi":"10.1093/cid/ciu337","title":"Immune Correlates of Protection in Human Invasive Aspergillosis","year":2014,"lang":"en","type":"review","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Aspergillosis; Immunology; Immune system; Immunity; Innate immune system; Aspergillus; Acquired immune system; Medicine; Phagocytosis; Biology; Microbiology","score_opus":0.08134370501840064,"score_gpt":0.41806926406184813,"score_spread":0.3367255590434475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100741623","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.030368695,0.96640414,0.000019633784,0.00000930085,0.0003604792,0.0018225787,0.000040025407,0.000092350376,0.00088278175],"genre_scores_gemma":[0.26103818,0.73823744,0.0000016475526,0.00002604695,0.00020918003,0.00014186148,0.00011429728,0.00003985319,0.00019145373],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99603647,0.0006141407,0.0022119104,0.00062794064,0.00024490847,0.0002646407],"domain_scores_gemma":[0.99681205,0.0011736348,0.0008806576,0.0007235015,0.00018949414,0.00022069093],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006572899,0.0003857361,0.0037059388,0.00024943397,0.000074531905,0.000013755734,0.0001402434,0.0006460277,0.00020042874],"category_scores_gemma":[0.005326009,0.000298239,0.0018637822,0.0004512894,0.00044330533,0.0000561577,0.00008724705,0.00088004227,0.00008669857],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064008425,0.0021513305,0.5069086,0.0426396,0.00042373396,0.00003406168,0.000008632962,7.434365e-7,0.00000273287,0.00014241609,0.00013705247,0.44748712],"study_design_scores_gemma":[0.0031075967,0.004016073,0.76624715,0.08920738,0.00787788,0.000023334962,0.000029677867,0.000009598311,0.000007834667,0.0012581326,0.12722889,0.0009864445],"about_ca_topic_score_codex":0.00008986818,"about_ca_topic_score_gemma":0.00013390627,"teacher_disagreement_score":0.4465007,"about_ca_system_score_codex":0.00017395841,"about_ca_system_score_gemma":0.00052002183,"threshold_uncertainty_score":0.99994695},"labels":[],"label_agreement":null},{"id":"W2101006714","doi":"10.1128/ec.00017-08","title":"Carnitine-Dependent Transport of Acetyl Coenzyme A in <i>Candida albicans</i> Is Essential for Growth on Nonfermentable Carbon Sources and Contributes to Biofilm Formation","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Alberta","keywords":"Peroxisome; Biology; Candida albicans; Biochemistry; Corpus albicans; Acetyl-CoA; Mutant; Mitochondrial matrix; Carnitine; Saccharomyces cerevisiae; Mitochondrion; Intracellular; Coenzyme A; Metabolism; Enzyme; Microbiology; Gene; Reductase; Cytosol","score_opus":0.011625593115069725,"score_gpt":0.23657005217658103,"score_spread":0.2249444590615113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101006714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956885,0.00025661406,0.00087282486,0.0005478375,0.00005467612,0.0009560027,0.00008555519,0.00001726321,0.0015207023],"genre_scores_gemma":[0.9983151,0.00013174095,0.00017783097,0.00051707734,0.000040999796,0.000034359702,0.00005466891,0.000015533278,0.0007127215],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988025,0.000019153149,0.0003869423,0.00026827576,0.00024719082,0.0002759485],"domain_scores_gemma":[0.9994545,0.000082577615,0.000081760656,0.00016798469,0.000104255574,0.00010891973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019663801,0.00015445834,0.000407975,0.00012721,0.000059460945,0.0000051247425,0.000058140507,0.00007845712,0.000039946783],"category_scores_gemma":[0.000032812146,0.00013840635,0.000078642726,0.00016099015,0.000082218,0.00005664982,0.000013056001,0.00010620322,0.0000024383355],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020769956,0.0004895303,0.9416974,0.0006878339,0.0000313584,0.000032704516,0.0021784038,0.000012430478,0.05154834,0.00007547951,0.001097487,0.00007199611],"study_design_scores_gemma":[0.00567119,0.001093902,0.5088903,0.00021757347,0.00012427218,0.000013077291,0.000887228,0.00038864743,0.48225957,0.000070722504,0.00019429134,0.00018927436],"about_ca_topic_score_codex":0.00083508855,"about_ca_topic_score_gemma":0.0004750728,"teacher_disagreement_score":0.43280718,"about_ca_system_score_codex":0.00008097771,"about_ca_system_score_gemma":0.00010168832,"threshold_uncertainty_score":0.5644047},"labels":[],"label_agreement":null},{"id":"W2101019830","doi":"10.1128/aac.48.11.4405-4413.2004","title":"In Vitro Evolution of Itraconazole Resistance in <i>Aspergillus fumigatus</i> Involves Multiple Mechanisms of Resistance","year":2004,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":148,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Itraconazole; Aspergillus fumigatus; Mutant; Efflux; Biology; Drug resistance; Microbiology; Selectable marker; Population; Antifungal drug; Gene; Genetics; Medicine; Candida albicans; Antifungal; Transformation (genetics)","score_opus":0.008833678015592608,"score_gpt":0.2402911848920831,"score_spread":0.23145750687649047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101019830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99673074,0.0004514305,0.00053133984,0.0014402807,0.000056589866,0.00035384076,0.000044708242,0.000011002444,0.00038004207],"genre_scores_gemma":[0.9945798,0.00075988227,0.0029712436,0.0011777125,0.00002063088,0.0000042665743,0.000013847587,0.000019735908,0.0004528787],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998658,0.000029467543,0.00052435213,0.00033767635,0.00018816706,0.00026232234],"domain_scores_gemma":[0.9994184,0.00002903321,0.00016005125,0.00025377443,0.0000810112,0.00005773205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002191981,0.00017389591,0.0005029822,0.00013105683,0.000033078475,0.0000055148817,0.00009369486,0.00013575944,0.000023391589],"category_scores_gemma":[0.000034863697,0.00016348275,0.00009703716,0.00033614255,0.00018894853,0.00012957037,0.000019607021,0.0001523023,0.000001213174],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035878422,0.0006412425,0.043188993,0.00046310807,0.000026314026,0.000023682664,0.0008081589,0.0000066948865,0.949407,0.001283785,0.00044622822,0.000116938725],"study_design_scores_gemma":[0.0061827335,0.00006710174,0.2786466,0.0006268638,0.000013796104,0.0000019407685,0.00027259698,0.000010052715,0.70961326,0.0036859168,0.0007141761,0.00016496584],"about_ca_topic_score_codex":0.00039492632,"about_ca_topic_score_gemma":0.0027196805,"teacher_disagreement_score":0.23979373,"about_ca_system_score_codex":0.00014756658,"about_ca_system_score_gemma":0.00011870877,"threshold_uncertainty_score":0.66666335},"labels":[],"label_agreement":null},{"id":"W2101657708","doi":"10.1086/341318","title":"Prevention of Nosocomial Fungal Infection: The French Approach","year":2002,"lang":"en","type":"letter","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Medicine; Intensive care medicine; Cross infection; Microbiology; Biology","score_opus":0.07030825493827089,"score_gpt":0.3627827220418949,"score_spread":0.292474467103624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101657708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75401765,0.007918364,0.002728919,0.13832493,0.008110184,0.008286339,0.0007272049,0.0012083254,0.07867807],"genre_scores_gemma":[0.8857996,0.0010854453,0.0000242091,0.08960024,0.013021316,0.0001619953,0.0005214254,0.00007736791,0.009708392],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99641407,0.00064157444,0.0012415318,0.0007056542,0.0006212639,0.00037592044],"domain_scores_gemma":[0.99684685,0.0010033571,0.00059508235,0.001051417,0.0003373474,0.00016594659],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00047852466,0.0003862928,0.0011590854,0.00010310465,0.00018745822,0.000039771265,0.00018867718,0.0011037035,0.00091638585],"category_scores_gemma":[0.0015478291,0.00026087248,0.0016720385,0.0003178241,0.00088507123,0.000081733444,0.000096558135,0.0025056677,0.000112585505],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029560797,0.00094094384,0.4850717,0.00047065224,0.00025548413,0.00003438671,0.000008942019,0.0000014216952,5.430658e-7,0.000007511109,0.51019704,0.0029817906],"study_design_scores_gemma":[0.00121167,0.00097381976,0.84936,0.00022154879,0.0015152404,0.00002342747,0.0000045400857,0.00004544246,0.0000024674343,0.00054975913,0.14583984,0.0002522606],"about_ca_topic_score_codex":0.00009404539,"about_ca_topic_score_gemma":0.000032557527,"teacher_disagreement_score":0.36435723,"about_ca_system_score_codex":0.00010392704,"about_ca_system_score_gemma":0.00032000054,"threshold_uncertainty_score":0.9999969},"labels":[],"label_agreement":null},{"id":"W2101788869","doi":"10.2334/josnusd.45.51","title":"Colonization of the oral cavity by candida species: risk factors in long-term geriatric care","year":2003,"lang":"en","type":"article","venue":"Journal of Oral Science","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Dentures; Candida albicans; Medicine; Population; Colonization; Oral cavity; Corpus albicans; Depression (economics); Geriatrics; Internal medicine; Intensive care medicine; Dentistry; Microbiology; Biology; Environmental health","score_opus":0.014694646119708388,"score_gpt":0.28984644539938964,"score_spread":0.27515179927968125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101788869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988839,0.00032087733,0.000109846595,0.00005743717,0.00023474642,0.000118506454,0.00000807906,0.000001592551,0.00026499172],"genre_scores_gemma":[0.9996173,0.00010239109,0.00010428364,0.00002138936,0.0000136147655,1.7092042e-7,4.744611e-7,0.0000027847614,0.0001376201],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987241,0.00008256842,0.0003189336,0.00011501855,0.00058469025,0.00017467694],"domain_scores_gemma":[0.9990355,0.000031484808,0.00034080917,0.0001521144,0.0003413906,0.000098735945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007793171,0.00007054322,0.00022208536,0.000086926215,0.00011035488,0.000019005207,0.00019399669,0.000038875078,0.000059678554],"category_scores_gemma":[0.0009255142,0.00003973332,0.00007950107,0.0010143252,0.0003503852,0.00020697355,0.000020516458,0.00020929765,5.3617714e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044067063,0.000057749185,0.985723,0.000018803836,0.0000028260706,0.0000060349166,0.00048684288,0.000018107114,0.013259404,0.000010623252,0.00012067498,0.00025185576],"study_design_scores_gemma":[0.0004147196,0.00017344998,0.980652,0.00004440352,0.000025543159,0.000008489796,0.0005590669,0.0000055031364,0.01794705,0.000013226366,0.00011575344,0.000040790834],"about_ca_topic_score_codex":0.00023624393,"about_ca_topic_score_gemma":0.0009502287,"teacher_disagreement_score":0.0050710076,"about_ca_system_score_codex":0.000336559,"about_ca_system_score_gemma":0.00064368814,"threshold_uncertainty_score":0.16202778},"labels":[],"label_agreement":null},{"id":"W2102109252","doi":"10.1128/jcm.40.3.1113-1115.2002","title":"Pulmonary Colonization by <i>Chrysosporium zonatum</i> Associated with Allergic Inflammation in an Immunocompetent Subject","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Fungus; Microbiology; Heterothallic; Biology; Colonization; Mating type; Botany","score_opus":0.03135150481159526,"score_gpt":0.3131034837105918,"score_spread":0.28175197889899656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102109252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973505,0.00081058365,0.00006276097,0.0010258323,0.00022761612,0.00019094042,0.000008115026,0.000011186067,0.000312462],"genre_scores_gemma":[0.9982988,0.0004600527,0.00017700273,0.00042175569,0.00016609978,0.0000014253457,0.000079866106,0.000013115054,0.00038185454],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99759513,0.00046130051,0.0014176234,0.00020351776,0.00010058315,0.00022187017],"domain_scores_gemma":[0.9980852,0.00036342308,0.0007978911,0.00017191669,0.00046885962,0.00011270473],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015057018,0.00013184293,0.00070288195,0.00008923565,0.000034761964,0.000009203599,0.00012786717,0.0003216852,0.00016419815],"category_scores_gemma":[0.0008675165,0.00009422871,0.00014573727,0.0002173435,0.00017374568,0.00015775398,0.000017650535,0.00069718005,0.000011279705],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024008893,0.0013875306,0.81163883,0.000018693621,0.00012039201,0.00025439324,0.00008672931,0.000020508629,0.17995977,0.000011464451,0.0011184624,0.0029823568],"study_design_scores_gemma":[0.0059721377,0.0057517365,0.9792717,0.00031950962,0.00012719113,0.0005717955,0.00012823145,0.00041036212,0.0019489792,0.0000625051,0.005214181,0.00022164766],"about_ca_topic_score_codex":0.0000037163081,"about_ca_topic_score_gemma":0.000083046594,"teacher_disagreement_score":0.17801079,"about_ca_system_score_codex":0.000107869666,"about_ca_system_score_gemma":0.00011970369,"threshold_uncertainty_score":0.3842535},"labels":[],"label_agreement":null},{"id":"W2102910526","doi":"10.1016/j.bmcl.2004.07.070","title":"Quinazolinone-based fungal efflux pump inhibitors. Part 1: Discovery of an (N-methylpiperazine)-containing derivative with activity in clinically relevant Candida spp.","year":2004,"lang":"en","type":"article","venue":"Bioorganic & Medicinal Chemistry Letters","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NAEJA-RGM Pharmaceuticals (Canada)","funders":"","keywords":"Quinazolinone; Efflux; Chemistry; Fluconazole; Candida albicans; Drug discovery; Pharmacology; Combinatorial chemistry; Antifungal; Biochemistry; Microbiology; Medicine; Biology","score_opus":0.013468604905204355,"score_gpt":0.26686510935465263,"score_spread":0.2533965044494483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102910526","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99396235,0.000096752505,0.0008466999,0.0043401173,0.00010379508,0.00041434055,0.000028629323,0.000059876194,0.00014745095],"genre_scores_gemma":[0.9972356,0.000024858708,0.0006398542,0.0014149862,0.00050937495,0.000019622628,0.00006892983,0.000052036827,0.000034711884],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99673134,0.000104254046,0.0008764161,0.0008266439,0.0008434972,0.00061785016],"domain_scores_gemma":[0.9981171,0.0002671731,0.00040140984,0.0007161369,0.00014804027,0.00035015456],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00096958806,0.0004426129,0.00097272947,0.00008000072,0.00008453575,0.000022694983,0.00023233231,0.00024990638,0.00008664448],"category_scores_gemma":[0.0007320285,0.0003481366,0.00016283726,0.00049420405,0.0007175959,0.0002664167,0.000048042948,0.0009078545,0.0000052988635],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004712218,0.0005845644,0.16573659,0.0004947923,0.000072721705,0.0005053536,0.0003041283,0.000022997541,0.8272646,0.0000024396452,0.000030986546,0.0002685956],"study_design_scores_gemma":[0.006914641,0.0010499019,0.18201353,0.0015541889,0.0001579342,0.00006818,0.0007381835,0.000023987599,0.8070718,0.000009986851,0.000040159495,0.00035748444],"about_ca_topic_score_codex":0.00058904383,"about_ca_topic_score_gemma":0.00026398993,"teacher_disagreement_score":0.020192793,"about_ca_system_score_codex":0.00064025447,"about_ca_system_score_gemma":0.0013210056,"threshold_uncertainty_score":0.99989706},"labels":[],"label_agreement":null},{"id":"W2103371583","doi":"10.1086/320876","title":"Need for Alternative Trial Designs and Evaluation Strategies for Therapeutic Studies of Invasive Mycoses","year":2001,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Manitoba Health","funders":"","keywords":"Medicine; Intensive care medicine; Antifungal; Clinical trial; Randomized controlled trial; Clinical study design; Invasive candidiasis; Risk analysis (engineering); Surgery; Fluconazole; Pathology; Dermatology","score_opus":0.3458958500988578,"score_gpt":0.5189002794365981,"score_spread":0.1730044293377403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103371583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98903155,0.004023025,0.0032875987,0.00016927131,0.00029724874,0.0029943069,0.000047592242,0.000032864962,0.000116520336],"genre_scores_gemma":[0.9963089,0.0024872383,0.00005218754,0.00027238944,0.00038355612,0.00040632396,0.00002531009,0.000011863685,0.00005222838],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99874,0.00016428088,0.000503879,0.00027636124,0.00017044245,0.00014501317],"domain_scores_gemma":[0.993577,0.0051329755,0.00020609134,0.00016165587,0.0008268679,0.000095383926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007271295,0.0001237293,0.000525562,0.0000467927,0.000097911005,0.000018102859,0.00003653817,0.000071321825,0.000017594926],"category_scores_gemma":[0.0060276566,0.000092592396,0.0002672399,0.000078621655,0.00038567604,0.00011416526,0.00001518147,0.000059798793,7.8177334e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.07077226,0.0029191414,0.87270284,0.0009416567,0.0018932982,0.000004063113,0.0004880851,0.000049481543,0.0008080663,0.0032623135,0.0011774973,0.044981267],"study_design_scores_gemma":[0.11266646,0.022549288,0.6111788,0.00038082254,0.004547877,0.0000028006004,0.0074368212,0.0013971261,0.0005169573,0.23863664,0.0003418593,0.00034450722],"about_ca_topic_score_codex":0.000008592874,"about_ca_topic_score_gemma":0.00009911551,"teacher_disagreement_score":0.26152402,"about_ca_system_score_codex":0.000042887903,"about_ca_system_score_gemma":0.00043297943,"threshold_uncertainty_score":0.72161037},"labels":[],"label_agreement":null},{"id":"W2104035394","doi":"10.1128/ec.00332-08","title":"Depletion of the Cullin Cdc53p Induces Morphogenetic Changes in <i>Candida albicans</i>","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Health Canada","keywords":"Biology; Candida albicans; Corpus albicans; Ubiquitin ligase; Cell biology; Mutant; Cullin; Filamentation; Ubiquitin; Microbiology; Gene; Biochemistry","score_opus":0.011442361493184273,"score_gpt":0.23946330178587202,"score_spread":0.22802094029268774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104035394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921408,0.00077035715,0.000026062482,0.0017076839,0.00009227067,0.00032787293,0.000004456578,0.000013281361,0.004917161],"genre_scores_gemma":[0.9974239,0.00018498587,0.00016287011,0.00087813445,0.00006362511,0.0000036494052,0.0000059819727,0.000008043354,0.0012688315],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99902725,0.00005696698,0.00023109131,0.00021334917,0.00026359965,0.0002077509],"domain_scores_gemma":[0.99940777,0.000043343895,0.00008094501,0.00036556993,0.000041985397,0.000060402246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019834905,0.00011391783,0.00025118122,0.00005527703,0.000033063712,0.0000050624003,0.00012102962,0.00007729549,0.00020983076],"category_scores_gemma":[0.000055770175,0.00007826131,0.00008071563,0.00030102464,0.00008071539,0.000021449281,0.000020152767,0.00017240476,0.000014814438],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027174084,0.000341855,0.8628671,0.000120239085,0.0000072813086,0.000019636667,0.0003218277,0.000026191336,0.13118282,0.000040883857,0.0006952388,0.004105154],"study_design_scores_gemma":[0.00061338797,0.00029594862,0.8865522,0.000109053115,0.00002787476,0.000004022194,0.00013705426,0.000036758353,0.111825556,0.00016607092,0.00016166441,0.00007037924],"about_ca_topic_score_codex":0.00011441954,"about_ca_topic_score_gemma":0.00058185845,"teacher_disagreement_score":0.023685103,"about_ca_system_score_codex":0.000054649074,"about_ca_system_score_gemma":0.000087265245,"threshold_uncertainty_score":0.31914034},"labels":[],"label_agreement":null},{"id":"W2104258504","doi":"10.1345/aph.1m393","title":"Drug-Drug Interaction Between Itraconazole and the Protease Inhibitor Lopinavir/Ritonavir","year":2009,"lang":"en","type":"article","venue":"Annals of Pharmacotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Alberta Health Services","funders":"","keywords":"Itraconazole; Lopinavir; Ritonavir; Medicine; Efavirenz; Pharmacology; Lopinavir/ritonavir; Gastroenterology; Internal medicine; Immunology; Dermatology; Antifungal; Human immunodeficiency virus (HIV); Antiretroviral therapy; Viral load","score_opus":0.05014064385374683,"score_gpt":0.39676596959043725,"score_spread":0.3466253257366904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104258504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9688085,0.0036595264,0.00003900462,0.025768124,0.00007971266,0.00077822804,0.000017602597,0.00003731642,0.000811997],"genre_scores_gemma":[0.9915398,0.0020038292,0.00006604417,0.0047533005,0.00046840092,0.000015976419,0.000009863998,0.000013403723,0.0011294232],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99877137,0.00013185854,0.00036287017,0.00024366939,0.00027121254,0.00021899524],"domain_scores_gemma":[0.9991943,0.00013953434,0.00015139741,0.00022802051,0.00015789283,0.00012883412],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006445689,0.00016462788,0.00037148385,0.000059485646,0.00009139746,0.000019565849,0.00009716197,0.000042357617,0.00013330208],"category_scores_gemma":[0.000037462672,0.00010864489,0.00016829035,0.00013476328,0.00021740604,0.0002046293,0.000011075246,0.0002824278,0.000011598542],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012789114,0.00093725475,0.07273799,0.00030138338,0.0003509405,0.000027590995,0.0032334558,0.000002728761,0.5873236,0.00095147756,0.03368506,0.28765938],"study_design_scores_gemma":[0.00658099,0.00029129742,0.110487,0.00026521462,0.000097824,0.000008213692,0.00038104356,0.00008080301,0.8466635,0.0020004292,0.032926224,0.00021751701],"about_ca_topic_score_codex":0.00007366833,"about_ca_topic_score_gemma":0.000004437883,"teacher_disagreement_score":0.28744185,"about_ca_system_score_codex":0.0000126189,"about_ca_system_score_gemma":0.000054739856,"threshold_uncertainty_score":0.443041},"labels":[],"label_agreement":null},{"id":"W2104731544","doi":"10.1016/j.jaci.2010.12.268","title":"AQX-1125, a Modulator of the SHIP1/PI3K Pathway, Suppresses Chemotaxis and Inflammation","year":2011,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Inimex Pharmaceuticals (Canada)","funders":"","keywords":"In vivo; Myeloperoxidase; Chemotaxis; Pharmacology; Inflammation; Ovalbumin; Chemistry; In vitro; Immunology; Medicine; Biology; Receptor; Biochemistry; Antigen","score_opus":0.04005284832191977,"score_gpt":0.29861877893192035,"score_spread":0.25856593061000055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104731544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965072,0.001920401,0.00003609962,0.0007511741,0.00021492112,0.0000686518,0.0000013662018,0.0000033000315,0.0004968709],"genre_scores_gemma":[0.996158,0.003196759,0.00028536507,0.00009951238,0.00009682332,4.8154794e-7,4.2696124e-7,0.000005349524,0.00015728908],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987631,0.00013365326,0.0007600542,0.00011282166,0.00011799809,0.00011240873],"domain_scores_gemma":[0.9988543,0.00021612436,0.00044149897,0.00020678145,0.00021600584,0.000065306864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054579234,0.00008429714,0.00041084812,0.000033276265,0.000045182143,0.0000039343836,0.000104052255,0.00020028598,0.00013725548],"category_scores_gemma":[0.0008694817,0.00004958181,0.00016343783,0.000053873795,0.00052779884,0.0000880213,0.00007301568,0.0003819606,0.0000012155264],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008808527,0.0010357298,0.8502486,0.00014335144,0.0028476557,0.000071422626,0.0016765157,5.292195e-7,0.0475282,0.004294881,0.00029703573,0.08304756],"study_design_scores_gemma":[0.0013767597,0.0011360749,0.9854608,0.00010340531,0.00007428012,0.00009769682,0.00031278923,0.000016008535,0.0082028955,0.0018271822,0.0013434236,0.000048642913],"about_ca_topic_score_codex":0.000019223156,"about_ca_topic_score_gemma":0.0000675783,"teacher_disagreement_score":0.13521226,"about_ca_system_score_codex":0.000008675497,"about_ca_system_score_gemma":0.00010600628,"threshold_uncertainty_score":0.20218875},"labels":[],"label_agreement":null},{"id":"W2104808759","doi":"10.1128/jcm.01767-09","title":"Aspergillus PCR: One Step Closer to Standardization","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":293,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Università degli Studi di Verona; Radboud Universiteit; Università degli Studi di Padova; Univerzita Karlova v Praze; Cardiff University; Hospital for Sick Children","keywords":"Aspergillosis; Aspergillus; Polymerase chain reaction; Standardization; DNA extraction; Biology; Medicine; Microbiology; Computer science; Immunology; Genetics","score_opus":0.04801403930777186,"score_gpt":0.4015632375150168,"score_spread":0.35354919820724495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104808759","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883936,0.00009539809,0.004624465,0.0040043504,0.0016131944,0.00015294175,0.000017308323,0.000009491918,0.0010892341],"genre_scores_gemma":[0.9840902,0.000100484576,0.011480835,0.0025041515,0.0011399243,4.7442526e-7,0.0000062960917,0.000011889419,0.000665708],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980163,0.00014646069,0.0013384937,0.00019262578,0.000098218945,0.00020787955],"domain_scores_gemma":[0.9979454,0.00038979316,0.0004106833,0.00026735218,0.00069997204,0.00028674412],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021508688,0.00010391479,0.0007734235,0.00008213398,0.000038423037,0.000008820756,0.00014079481,0.00032944075,0.0006641446],"category_scores_gemma":[0.0036116794,0.000073862684,0.00033976178,0.00011599728,0.00018282702,0.000052482676,0.00004161808,0.00094457075,0.00009558329],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039794287,0.00062068005,0.23036507,0.000030169005,0.00018368372,0.000054652715,0.000043483593,0.0000022203344,0.7251428,0.00037213642,0.014767308,0.024438417],"study_design_scores_gemma":[0.0035999126,0.0036064694,0.64026153,0.00011318848,0.00019098698,0.0003644644,0.000056390043,0.00000488143,0.008143834,0.00027204127,0.34322703,0.00015928879],"about_ca_topic_score_codex":0.000003272518,"about_ca_topic_score_gemma":0.0000906864,"teacher_disagreement_score":0.71699893,"about_ca_system_score_codex":0.000027816786,"about_ca_system_score_gemma":0.000321938,"threshold_uncertainty_score":0.7271917},"labels":[],"label_agreement":null},{"id":"W2104863787","doi":"10.1371/journal.pgen.1000046","title":"Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus","year":2008,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":531,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer; McGill University","funders":"National Institute of Allergy and Infectious Diseases; Fundação de Amparo à Pesquisa do Estado de São Paulo; Merck","keywords":"Biology; Aspergillus fumigatus; Gene; Genetics; Pseudogene; Gene duplication; Genome; Horizontal gene transfer; Comparative genomics; Transposable element; Gene cluster; Gene family; Genomics; Microbiology","score_opus":0.036201592177451745,"score_gpt":0.25554276883819965,"score_spread":0.2193411766607479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104863787","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891344,0.0042396523,0.000011872083,0.00022622831,0.00007033987,0.00038455983,0.000016738775,0.000027250415,0.0058889776],"genre_scores_gemma":[0.99621207,0.0014002431,0.00020326512,0.0010650003,0.00019042903,0.00001757901,0.000023433795,0.000021486829,0.0008664728],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99864966,0.000073849376,0.00028457362,0.0002805774,0.00036632683,0.00034504003],"domain_scores_gemma":[0.9991511,0.000078474885,0.0000454674,0.0005831384,0.00005536282,0.00008643525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016580331,0.00015577894,0.0002523367,0.00005494463,0.0001047952,0.000010792839,0.00017729154,0.00010316901,0.0001599737],"category_scores_gemma":[0.00007766537,0.00010809477,0.00010915213,0.00019308606,0.00013244286,0.000016887927,0.00003969298,0.00025605093,0.00012538604],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018884703,0.0004763502,0.8570702,0.0000666338,0.000051218383,0.0005681838,0.0037820505,0.000013985868,0.13536404,0.000018987095,0.0015725741,0.0008268998],"study_design_scores_gemma":[0.0010729464,0.00037416382,0.98699003,0.000032700715,0.000090666486,0.00015725211,0.0005643816,0.00076087617,0.006517316,0.000103525876,0.0031595794,0.00017655054],"about_ca_topic_score_codex":0.000005004974,"about_ca_topic_score_gemma":0.00008893675,"teacher_disagreement_score":0.12991981,"about_ca_system_score_codex":0.00009655042,"about_ca_system_score_gemma":0.0001663517,"threshold_uncertainty_score":0.4407977},"labels":[],"label_agreement":null},{"id":"W2105033070","doi":"10.1080/13693780701299333","title":"<i>Candida albicans</i>Als proteins mediate aggregation with bacteria and yeasts","year":2007,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Research Resources; National Institute of General Medical Sciences; National Institutes of Health; U.S. Department of Veterans Affairs","keywords":"Candida albicans; Microbiology; Biofilm; Bacterial adhesin; Yeast; Corpus albicans; Bacteria; Biology; Saccharomyces cerevisiae; Chemistry; Virulence; Biochemistry; Gene; Genetics","score_opus":0.007528773816860386,"score_gpt":0.26895214852934646,"score_spread":0.26142337471248606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105033070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909364,0.00020136833,0.002076364,0.0029405034,0.00012953716,0.00047036752,0.0000038010376,0.000051393326,0.0031902536],"genre_scores_gemma":[0.99604,0.00010383903,0.0010174098,0.001866253,0.00026726437,0.00002167334,0.0000233806,0.000014198683,0.0006459698],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998521,0.000062958294,0.00028302462,0.00030953143,0.00045360034,0.0003699147],"domain_scores_gemma":[0.9989496,0.00021611628,0.00007152798,0.00019579227,0.00008429736,0.00048265327],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00090762204,0.00013055942,0.00034682357,0.0000685449,0.0000614958,0.000006731803,0.000066454675,0.00024534354,0.0017873317],"category_scores_gemma":[0.0008484586,0.00008868454,0.000030667565,0.00015696658,0.00046791648,0.000046414927,0.000034093566,0.0002876669,0.000034328772],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049017984,0.00053116644,0.82456946,0.00037195144,0.00015582818,0.0019269214,0.0006817213,8.194331e-8,0.03673779,0.0013891914,0.0020014374,0.12673266],"study_design_scores_gemma":[0.0024337417,0.001129998,0.97372705,0.00016911239,0.000063500636,0.0002640858,0.00012053785,0.000019102505,0.003053796,0.00020043965,0.01868038,0.00013827396],"about_ca_topic_score_codex":0.000072584386,"about_ca_topic_score_gemma":0.0012061665,"teacher_disagreement_score":0.14915758,"about_ca_system_score_codex":0.000051604267,"about_ca_system_score_gemma":0.0002647923,"threshold_uncertainty_score":0.9991252},"labels":[],"label_agreement":null},{"id":"W2105458205","doi":"10.1128/aac.00787-06","title":"Standardization of an Experimental Murine Model of Invasive Pulmonary Aspergillosis","year":2006,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Aspergillosis; Amphotericin B; Animal model; Medicine; Antifungal; Immunology; Internal medicine; Dermatology","score_opus":0.014105537036345725,"score_gpt":0.26625726816753775,"score_spread":0.25215173113119205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105458205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978597,0.0000531696,0.000724521,0.00017271911,0.000017295693,0.00018627023,0.00005386246,0.000011458775,0.00092101493],"genre_scores_gemma":[0.9973991,0.0003036027,0.0013787887,0.0005035981,0.000036893518,0.0000013709443,0.00006669432,0.000015960715,0.0002940237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992848,0.0000129764385,0.00025735868,0.00019102957,0.00014243038,0.00011137375],"domain_scores_gemma":[0.99960697,0.0000067009005,0.00009614056,0.0001610599,0.000088485256,0.0000406264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000626614,0.00010933948,0.0002714972,0.000043332704,0.000038272494,0.000005222507,0.00004283994,0.00006302737,0.00009828128],"category_scores_gemma":[0.0000035968915,0.00009374891,0.000074644275,0.000072023664,0.00012617058,0.000089272944,0.00001407465,0.000039305192,4.0267184e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000670302,0.00082965085,0.06327993,0.00011724906,0.000029730578,0.000004160992,0.00018192195,0.00015796868,0.93319696,0.00008056627,0.0007202494,0.0007312898],"study_design_scores_gemma":[0.0012781683,0.00021862413,0.07509581,0.00007686315,0.0000258527,0.0000056665053,0.00009598656,0.0013281382,0.9215588,0.000079122336,0.00014308313,0.000093866256],"about_ca_topic_score_codex":0.00010583589,"about_ca_topic_score_gemma":0.00001537886,"teacher_disagreement_score":0.011815884,"about_ca_system_score_codex":0.000020264528,"about_ca_system_score_gemma":0.00004560226,"threshold_uncertainty_score":0.38229695},"labels":[],"label_agreement":null},{"id":"W2105673410","doi":"10.1128/ec.00034-10","title":"Adaptations of Candida albicans for Growth in the Mammalian Intestinal Tract","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":144,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Candida albicans; Biology; Corpus albicans; Microbiology; Gene; Fungus; Pathogen; Colonization; Population; Gene expression; Pathogenic fungus; Genetics","score_opus":0.019516141792307505,"score_gpt":0.27543249707245815,"score_spread":0.25591635528015066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105673410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852442,0.00004065221,0.0005854012,0.0011035274,0.00008769755,0.00040917296,0.000014788927,0.000008232764,0.0125063155],"genre_scores_gemma":[0.99617076,0.000006018098,0.0022949572,0.00018782784,0.000070772,0.000018474731,0.000018806462,0.000008131303,0.0012242424],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993227,0.000017317401,0.00021553968,0.00013962998,0.00014538111,0.00015943365],"domain_scores_gemma":[0.9992473,0.00034747412,0.000053424712,0.00021464896,0.000085952954,0.000051182753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003453837,0.00007633698,0.00015503177,0.00004488838,0.0000390308,0.0000059700437,0.00010871136,0.00004381621,0.00020732246],"category_scores_gemma":[0.00035506938,0.000051652893,0.00008289589,0.0001451697,0.00010077013,0.000032286473,0.000006888147,0.00023349789,0.000007802307],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015953521,0.0005466932,0.984338,0.00016312613,0.0000047933418,0.0000204793,0.0011104575,0.0000015880281,0.00966073,0.0019340597,0.001051431,0.0010090988],"study_design_scores_gemma":[0.000673902,0.0002440297,0.9946307,0.000026879206,0.000044619268,0.000014258224,0.0009295258,0.00018793617,0.0023942098,0.00046960154,0.00032940597,0.000054908996],"about_ca_topic_score_codex":0.000491161,"about_ca_topic_score_gemma":0.0023403876,"teacher_disagreement_score":0.011282073,"about_ca_system_score_codex":0.000015150694,"about_ca_system_score_gemma":0.00014957773,"threshold_uncertainty_score":0.22700356},"labels":[],"label_agreement":null},{"id":"W2106569303","doi":"10.1186/1476-0711-8-23","title":"Antifungal treatment for invasive Candida infections: a mixed treatment comparison meta-analysis","year":2009,"lang":"en","type":"review","venue":"Annals of Clinical Microbiology and Antimicrobials","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Ottawa Hospital; University of Ottawa; McMaster University; Simon Fraser University","funders":"Pfizer","keywords":"Anidulafungin; Amphotericin B; Internal medicine; Fluconazole; Medicine; Relative risk; Meta-analysis; Confidence interval; Echinocandin; Randomized controlled trial; Antifungal; Micafungin","score_opus":0.5130587198684142,"score_gpt":0.5412516871939389,"score_spread":0.028192967325524676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106569303","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011284932,0.98180807,0.000059632788,0.0004818105,0.00019484528,0.0028328283,0.0032285491,0.00003911701,0.00007022651],"genre_scores_gemma":[0.012406808,0.9825742,0.00044662732,0.0005818154,0.00019821805,0.00012721795,0.0023718325,0.000038251597,0.0012550245],"study_design_codex":"meta_analysis","study_design_gemma":"not_applicable","domain_scores_codex":[0.9933107,0.0008527588,0.0038604985,0.0013143718,0.000060266815,0.00060141034],"domain_scores_gemma":[0.99227023,0.0041654133,0.0020071752,0.00084912154,0.00043766393,0.0002703787],"candidate_categories":["metaepi_narrow","metaepi_broad","research_integrity"],"consensus_categories":["metaepi_broad"],"category_scores_codex":[0.0014778591,0.0009311837,0.01751526,0.0004636466,0.00019330207,0.000029224586,0.00017640792,0.0013272886,0.0001879162],"category_scores_gemma":[0.0008579695,0.0005694733,0.013057062,0.0004984717,0.00068964704,0.000055336015,0.00005152945,0.00032948496,0.000022224585],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012752613,0.008546443,0.005365119,0.0072972593,0.6055131,0.00003645731,0.000076600045,0.0000027041708,0.0008908021,0.00008641778,0.011179614,0.35973024],"study_design_scores_gemma":[0.0013531812,0.005731446,0.00054167525,0.0006572374,0.42351702,0.000048192254,0.000012714637,6.5204546e-7,0.0014264323,0.000025601974,0.5662505,0.0004353279],"about_ca_topic_score_codex":0.00011603143,"about_ca_topic_score_gemma":0.00074280746,"teacher_disagreement_score":0.55507094,"about_ca_system_score_codex":0.000052154017,"about_ca_system_score_gemma":0.0009626761,"threshold_uncertainty_score":0.9999692},"labels":[],"label_agreement":null},{"id":"W2106753359","doi":"10.1093/jpids/pit080","title":"Invasive Fusariosis: A Single Pediatric Center 15-Year Experience","year":2013,"lang":"en","type":"review","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Clinical Evaluative Sciences; SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Medicine; Fusariosis; Hematopoietic stem cell transplantation; Single Center; Antifungal; Voriconazole; Mucormycosis; Fusarium; Pediatrics; Transplantation; Intensive care medicine; Internal medicine; Surgery; Dermatology; Biology","score_opus":0.02938381641933394,"score_gpt":0.3023445336109282,"score_spread":0.27296071719159426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106753359","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.043450594,0.9536266,0.000021301863,0.000039152725,0.0014580872,0.0010046673,0.00009045812,0.00004362066,0.0002655515],"genre_scores_gemma":[0.027223498,0.9669706,0.00006643828,0.00025961382,0.0049605244,0.000046709818,0.000010495513,0.00007311308,0.0003889572],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963657,0.00028535043,0.0014069992,0.00042236334,0.0009848368,0.0005347312],"domain_scores_gemma":[0.9954433,0.00048276607,0.002192186,0.00071972917,0.00068726385,0.0004747432],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00029942926,0.00058024126,0.0019706069,0.00017114263,0.00030848282,0.00011670952,0.0005583215,0.0004478757,0.0003092336],"category_scores_gemma":[0.001160771,0.00033968873,0.0053650816,0.0011872932,0.0001641195,0.0002809835,0.00025509036,0.0012736066,0.000097395125],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003764377,0.0019064038,0.8987684,0.024046557,0.00063947577,0.0000434027,0.00063573086,0.0000013987534,0.0000015243542,0.000005147988,0.060914263,0.013000044],"study_design_scores_gemma":[0.010664744,0.0037154965,0.043113813,0.0154828,0.115221165,0.009883616,0.0034898957,0.000007133336,0.0000038221237,0.0004858611,0.79374367,0.004187961],"about_ca_topic_score_codex":0.000012231731,"about_ca_topic_score_gemma":0.0000033917797,"teacher_disagreement_score":0.8556546,"about_ca_system_score_codex":0.00089934486,"about_ca_system_score_gemma":0.0023369074,"threshold_uncertainty_score":0.9999055},"labels":[],"label_agreement":null},{"id":"W2106769310","doi":"10.1371/journal.pbio.1000133","title":"Biofilm Matrix Regulation by Candida albicans Zap1","year":2009,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":349,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Biology; Biofilm; Candida albicans; Transcription factor; Population; Corpus albicans; Microbiology; Cell biology; Transcriptional regulation; Genetics; Gene; Bacteria","score_opus":0.01406472475382833,"score_gpt":0.30054950383729934,"score_spread":0.28648477908347103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106769310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98816955,0.0006442024,0.00026485222,0.0037182875,0.000056836427,0.00020447509,0.000030756895,0.00007379492,0.0068372665],"genre_scores_gemma":[0.9937953,0.0000778718,0.0003213378,0.0009517639,0.00010936998,0.0000033751564,0.00017449273,0.0000057859106,0.004560711],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992385,0.00003954412,0.00017804537,0.000247272,0.00007469373,0.00022193266],"domain_scores_gemma":[0.99953103,0.00003582764,0.000046393474,0.0002479328,0.00005275465,0.000086087995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000085971726,0.00009536087,0.0002274054,0.000040703882,0.000048510974,0.0000041404332,0.00005534517,0.00015011847,0.00061904953],"category_scores_gemma":[0.000104422994,0.000073526164,0.00005558692,0.00010692405,0.00008450986,0.000027096441,0.00000812933,0.00011084669,0.000097572076],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030186572,0.00020274533,0.16730824,0.000019735506,0.000032672706,0.0000057939237,0.000058839032,1.7119478e-7,0.81112957,0.0015566038,0.013382774,0.0060009523],"study_design_scores_gemma":[0.0018446704,0.0020485967,0.86275476,0.00006830988,0.00015410049,0.000023692077,0.00010482419,0.0003469236,0.06852362,0.004709841,0.05907091,0.00034973532],"about_ca_topic_score_codex":0.000058486723,"about_ca_topic_score_gemma":0.000033721306,"teacher_disagreement_score":0.742606,"about_ca_system_score_codex":0.000053497817,"about_ca_system_score_gemma":0.00004945422,"threshold_uncertainty_score":0.6778158},"labels":[],"label_agreement":null},{"id":"W2107209235","doi":"10.1111/tid.12384","title":"Invasive <i>Saccharomyces cerevisiae</i> in a liver transplant patient: case report and review of infection in transplant recipients","year":2015,"lang":"en","type":"review","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Medicine; Fungemia; Caspofungin; Saccharomyces cerevisiae; Intensive care medicine; Surgery; Immunology; Antifungal; Yeast; Amphotericin B; Mycosis; Dermatology","score_opus":0.03577511425774591,"score_gpt":0.3106915639856234,"score_spread":0.2749164497278775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107209235","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.095533535,0.8985305,0.0000127933745,0.000018699084,0.00018014201,0.0037294733,0.0014711776,0.000063906075,0.0004597689],"genre_scores_gemma":[0.18428428,0.81403065,0.000008535741,0.00010011199,0.000042910047,0.00029385753,0.0011533338,0.000064271655,0.000022041939],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99466467,0.00060128066,0.0024016134,0.0011166215,0.00064680906,0.0005689939],"domain_scores_gemma":[0.9973914,0.00031036953,0.0006758756,0.000738215,0.00020061845,0.00068352936],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010361762,0.000866828,0.003594551,0.0006643561,0.0000651917,0.000018978435,0.00010691129,0.00042693518,0.00009854473],"category_scores_gemma":[0.00017834491,0.0007123619,0.0008015993,0.00092547457,0.00018793355,0.00023223479,0.00001968572,0.0008869933,0.000015241327],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067571114,0.0013149914,0.19051264,0.47217104,0.00023618553,0.25411293,0.0007400259,9.359158e-7,0.0000012031597,0.000016237187,0.000079116944,0.08013897],"study_design_scores_gemma":[0.0030954995,0.0007694643,0.014911116,0.83409894,0.0092904605,0.10241847,0.00001636196,0.000009461143,0.000005852615,0.000039816885,0.034061514,0.0012830653],"about_ca_topic_score_codex":0.0017130566,"about_ca_topic_score_gemma":0.004152417,"teacher_disagreement_score":0.36192787,"about_ca_system_score_codex":0.0004140073,"about_ca_system_score_gemma":0.0014277784,"threshold_uncertainty_score":0.99953276},"labels":[],"label_agreement":null},{"id":"W2108201008","doi":"10.1080/13693780802380545","title":"Identification of a new species,<i>Candida subhashii</i>, as a cause of peritonitis","year":2008,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; SickKids Foundation; Ministry of Health and Long Term Care; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Internal transcribed spacer; Biology; Phylogenetic tree; Candida albicans; Microbiology; Ribosomal RNA; Candida dubliniensis; Candida parapsilosis; Ribosomal DNA; Candida tropicalis; Clade; Gene; Corpus albicans; Genetics","score_opus":0.02943079930343519,"score_gpt":0.30836888598225054,"score_spread":0.27893808667881537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108201008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99306697,0.00036212115,0.00037556273,0.0017910427,0.00019355744,0.00020961334,0.000009363966,0.000020063584,0.003971679],"genre_scores_gemma":[0.98959595,0.00062424265,0.00010074708,0.0004130005,0.00016272518,0.0000065685417,0.0000144280875,0.000009203691,0.009073134],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99832004,0.00007211195,0.000591187,0.00022821465,0.00057862635,0.00020980116],"domain_scores_gemma":[0.99888605,0.00019193187,0.00015572154,0.00032416586,0.00015997917,0.0002821727],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031654016,0.000096177915,0.0004854127,0.00008649728,0.000041677224,0.0000013508303,0.00012984738,0.00022316877,0.0044740574],"category_scores_gemma":[0.002301228,0.00008157071,0.000114223905,0.00023533586,0.00073354464,0.000032575375,0.00003769453,0.0002181488,0.00007124354],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013378775,0.0010143553,0.7893294,0.0003934967,0.00018195607,0.0011354191,0.0024734112,2.9561158e-7,0.1647855,0.0033005408,0.032017805,0.0040299157],"study_design_scores_gemma":[0.0017256882,0.0007837409,0.95607644,0.00008482315,0.000090467256,0.0004372987,0.00028044585,0.000024015077,0.031255703,0.00039973675,0.008751316,0.000090332],"about_ca_topic_score_codex":0.00035574313,"about_ca_topic_score_gemma":0.0001924723,"teacher_disagreement_score":0.16674702,"about_ca_system_score_codex":0.000049922124,"about_ca_system_score_gemma":0.0010496479,"threshold_uncertainty_score":0.996436},"labels":[],"label_agreement":null},{"id":"W2108489416","doi":"10.1007/s11908-013-0380-y","title":"Anti-Aspergillus Prophylaxis in Lung Transplantation: A Systematic Review and Meta-analysis","year":2013,"lang":"en","type":"review","venue":"Current Infectious Disease Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Voriconazole; Itraconazole; Aspergillus; Amphotericin B; Aspergillosis; Medicine; Adverse effect; Lung transplantation; Internal medicine; Randomized controlled trial; Transplantation; Intensive care medicine; Antifungal; Immunology; Biology; Microbiology; Dermatology","score_opus":0.06110532155802789,"score_gpt":0.3701841924842543,"score_spread":0.30907887092622643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108489416","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010452526,0.99025977,0.000030956773,0.000025779846,0.00014146988,0.009132034,0.00009169298,0.00008456626,0.00012919358],"genre_scores_gemma":[0.003915875,0.992461,0.0000038155154,0.00005607934,0.000036900266,0.0025971986,0.00038945102,0.000046891506,0.00049275084],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9947686,0.00055970484,0.0025007844,0.0011019474,0.0006761271,0.00039284426],"domain_scores_gemma":[0.99630755,0.00018572416,0.0014168014,0.001288653,0.0002757092,0.0005255727],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010145144,0.000740479,0.010845063,0.0005793771,0.000082173734,0.00006836308,0.00007931993,0.0002083292,0.00058873475],"category_scores_gemma":[0.0006691345,0.00046837525,0.004189366,0.0014925274,0.000067888286,0.00013929505,0.000038501,0.0005957071,0.00003472092],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000023294601,0.00027828183,0.0039039906,0.9508554,0.042327683,0.0011960648,0.000012772282,3.071646e-7,1.0619276e-8,0.0000046342393,0.000108104665,0.0013104187],"study_design_scores_gemma":[0.000082936655,0.000026774282,0.000587327,0.09534559,0.89598715,0.00044271746,0.0000016056613,0.0000022904226,2.2287464e-8,0.000009769504,0.007119679,0.00039411092],"about_ca_topic_score_codex":0.000035455218,"about_ca_topic_score_gemma":0.000023216053,"teacher_disagreement_score":0.8555098,"about_ca_system_score_codex":0.00040623953,"about_ca_system_score_gemma":0.0005633393,"threshold_uncertainty_score":0.9997768},"labels":[],"label_agreement":null},{"id":"W2108943171","doi":"10.1016/j.chembiol.2007.10.008","title":"Inhibition of the Pathogenically Related Morphologic Transition in Candida albicans by Disrupting Cdc42 Binding to Its Effectors","year":2007,"lang":"en","type":"article","venue":"Chemistry & Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; University of Waterloo","funders":"National Research Council Canada; Government of Canada; Genomic Health","keywords":"Candida albicans; CDC42; Biology; Signal transduction; Effector; Corpus albicans; Cell biology; Transduction (biophysics); GTPase; Fungal protein; Transition (genetics); Microbiology; Yeast; Biochemistry; Saccharomyces cerevisiae","score_opus":0.008455603590575341,"score_gpt":0.2758940264514911,"score_spread":0.26743842286091574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108943171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981574,0.00013577005,0.0001389479,0.00037924835,0.000044162123,0.00024502553,0.000043136,0.000019565987,0.00083677674],"genre_scores_gemma":[0.99946415,0.00001401768,0.000039978466,0.00016342007,0.000026878339,0.0000066244265,0.00011785421,0.000007619207,0.0001594543],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989648,0.00004882617,0.00037151488,0.00027460678,0.00008126566,0.00025902627],"domain_scores_gemma":[0.9994814,0.00011669496,0.00009002666,0.00018556279,0.000047297428,0.00007904646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005665376,0.00011088545,0.00024936904,0.000024711768,0.000042411335,0.0000018688487,0.00006414312,0.0002586731,0.00011141439],"category_scores_gemma":[0.0004547398,0.000078403245,0.00009376036,0.00030781186,0.00012293196,0.000015864915,0.00002381785,0.00025612736,0.000004719175],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001854434,0.000050353774,0.10532393,0.00008550662,0.00000840116,0.000015861006,0.00018008988,0.0000015047689,0.8935837,0.0000039253528,0.000032745622,0.0005285437],"study_design_scores_gemma":[0.00064084004,0.00010653532,0.10200971,0.00016173032,0.000024559744,0.00002174373,0.00022286599,0.000015695265,0.8966086,0.000023699513,0.00007308247,0.000090938374],"about_ca_topic_score_codex":0.00003846096,"about_ca_topic_score_gemma":0.000042033338,"teacher_disagreement_score":0.0033142176,"about_ca_system_score_codex":0.00012670021,"about_ca_system_score_gemma":0.000041981606,"threshold_uncertainty_score":0.31971914},"labels":[],"label_agreement":null},{"id":"W2109228421","doi":"10.1091/mbc.e03-03-0179","title":"Superoxide Dismutases in<i>Candida albicans</i>: Transcriptional Regulation and Functional Characterization of the Hyphal-induced<i>SOD5</i>Gene","year":2003,"lang":"en","type":"article","venue":"Molecular Biology of the Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":285,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Candida albicans; Biology; Superoxide dismutase; SOD2; Microbiology; Corpus albicans; Virulence; SOD1; Superoxide; Mutant; Transcription factor; Reactive oxygen species; Molecular biology; Gene; Biochemistry; Oxidative stress; Enzyme","score_opus":0.010241019930250813,"score_gpt":0.2221460866547377,"score_spread":0.2119050667244869,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109228421","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974474,0.0002466268,0.0011446207,0.0004857662,0.00011867639,0.00023853572,0.000031296193,0.0000032970447,0.0002838169],"genre_scores_gemma":[0.9993774,0.000024723799,0.00007725433,0.00024514558,0.000011201663,0.000005400515,0.000048003058,0.0000064630744,0.0002043515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919707,0.00017579188,0.00023195402,0.00017017247,0.00012043614,0.00010459127],"domain_scores_gemma":[0.9995662,0.000027820877,0.00009042806,0.00023226022,0.000058504073,0.000024762292],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018135985,0.00008661664,0.00017224636,0.000032691736,0.00004443348,0.0000016801283,0.000057781144,0.00009261511,0.000052934407],"category_scores_gemma":[0.000068443784,0.000053379084,0.000099185374,0.00014000648,0.00022687954,0.000022741278,0.00001576175,0.000094733856,4.3731433e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008403978,0.00007566557,0.17220052,0.000028604807,0.000011861858,4.3441844e-7,0.000037405884,0.000004178274,0.82647455,0.0010098316,0.0000034582697,0.00006947769],"study_design_scores_gemma":[0.0003492199,0.00003723926,0.46148425,0.000016833661,0.000024638388,0.000004503546,0.000011302447,0.000008725823,0.5374643,0.00043790077,0.0001333635,0.000027695654],"about_ca_topic_score_codex":0.00002684026,"about_ca_topic_score_gemma":0.000024806299,"teacher_disagreement_score":0.28928375,"about_ca_system_score_codex":0.00002022997,"about_ca_system_score_gemma":0.000081585364,"threshold_uncertainty_score":0.21767358},"labels":[],"label_agreement":null},{"id":"W2109362406","doi":"10.1128/iai.00588-07","title":"Analysis of<i>PRA1</i>and Its Relationship to<i>Candida albicans</i>- Macrophage Interactions","year":2008,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Phagosome; Biology; Candida albicans; Phagocytosis; Phagolysosome; Macrophage; Microbiology; Corpus albicans; Molecular biology; In vitro; Biochemistry","score_opus":0.03782053552456141,"score_gpt":0.31864929179945206,"score_spread":0.2808287562748907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109362406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99386907,0.00018163268,0.00033087897,0.00013949334,0.00006184045,0.00013876134,0.000008672395,0.000028489661,0.0052411593],"genre_scores_gemma":[0.9973551,0.00028941446,0.000047422276,0.00014705776,0.000014583446,0.0000063547413,0.000017695129,0.0000049805,0.0021173737],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993875,0.00007707526,0.00021134324,0.00013475936,0.000095825664,0.00009351694],"domain_scores_gemma":[0.9993718,0.00013847767,0.000056969187,0.00018706419,0.00013255709,0.000113119306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018128421,0.000079806734,0.00023917049,0.00026762515,0.00026552996,0.0000074808045,0.00001897071,0.00004899297,0.00026158983],"category_scores_gemma":[0.0003855764,0.00007273444,0.00008831659,0.00073900743,0.00006658358,0.00011468305,0.00002204165,0.00022679206,0.000009944526],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016763264,0.00010761817,0.98588586,0.000032875047,0.00019440276,0.000002714672,0.0007070002,0.000008989499,0.01165403,0.0001622026,0.000047827267,0.0010288365],"study_design_scores_gemma":[0.00027605478,0.00011575381,0.9957211,0.00002271052,0.0003535348,0.000024854256,0.000099647914,0.0001754182,0.0017897137,0.000019741638,0.0013394644,0.000061987674],"about_ca_topic_score_codex":0.00068321533,"about_ca_topic_score_gemma":0.00092003035,"teacher_disagreement_score":0.009864315,"about_ca_system_score_codex":0.00003449964,"about_ca_system_score_gemma":0.00003444764,"threshold_uncertainty_score":0.29660243},"labels":[],"label_agreement":null},{"id":"W2109540663","doi":"10.1111/j.1365-2958.2008.06158.x","title":"The role of <i>Candida albicans FAR1</i> in regulation of pheromone‐mediated mating, gene expression and cell cycle arrest","year":2008,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Biology; Pheromone; Candida albicans; Cell biology; Mating type; Gene; Gene expression; Cell cycle; Regulator; Regulation of gene expression; Cell cycle checkpoint; Genetics","score_opus":0.00383648355687617,"score_gpt":0.202759552339494,"score_spread":0.19892306878261784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109540663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99689525,0.0020495027,0.00014351305,0.000052133088,0.000023155906,0.00019611353,0.000015968442,0.000005834104,0.00061851664],"genre_scores_gemma":[0.99903464,0.00015558241,0.0006127532,0.000050668474,0.000007284775,0.000004313971,0.000054739794,0.000008889793,0.00007113962],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991617,0.000097536824,0.00034459145,0.00018771809,0.00005551526,0.00015293866],"domain_scores_gemma":[0.9994097,0.00007678887,0.00015855407,0.0002630794,0.000059508828,0.000032372445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018105067,0.00008896261,0.00026255765,0.000036298712,0.000044474327,0.0000013745826,0.00006435149,0.00010963503,0.000022345235],"category_scores_gemma":[0.00007822964,0.000062848456,0.000050706003,0.00009883406,0.00028536638,0.000014361109,0.000037057725,0.00009936231,0.0000022101206],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016340241,0.00006968157,0.07394606,0.000024582303,0.000007512842,0.0000082856195,0.00020445949,0.000010884446,0.92531717,0.000015648702,0.000036247046,0.00019607448],"study_design_scores_gemma":[0.0006893922,0.0001043073,0.07099958,0.00003548489,0.000009854331,0.000016861306,0.00012087834,0.000055709683,0.92754036,0.00008137168,0.00029595147,0.000050232728],"about_ca_topic_score_codex":0.000102273305,"about_ca_topic_score_gemma":0.0000578552,"teacher_disagreement_score":0.0029464792,"about_ca_system_score_codex":0.000016766358,"about_ca_system_score_gemma":0.000043104268,"threshold_uncertainty_score":0.25628856},"labels":[],"label_agreement":null},{"id":"W2110558489","doi":"10.1128/iai.00159-06","title":"Cardiac Failure in C5-Deficient A/J Mice after<i>Candida albicans</i>Infection","year":2006,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"","keywords":"Biology; Candida albicans; Endocrinology; Creatine kinase; Myocarditis; Internal medicine; Immunology; Microbiology; Medicine","score_opus":0.006305051246829007,"score_gpt":0.24114698543382693,"score_spread":0.23484193418699792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110558489","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930022,0.0003571705,0.0001750649,0.00015217425,0.00021815172,0.00026792116,0.000008912818,0.0000681054,0.0057503073],"genre_scores_gemma":[0.99870807,0.00026759293,0.000027643839,0.00012330501,0.00008827989,0.000028321418,0.000037532045,0.000010359072,0.0007088858],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99908185,0.0001254552,0.00024015205,0.00020836835,0.00014080694,0.00020336645],"domain_scores_gemma":[0.99953556,0.000040453215,0.000049857805,0.00022450103,0.00008859791,0.000061050545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033682404,0.00013607061,0.00024185744,0.00013555126,0.00013321887,0.00003055674,0.000018355819,0.000120781806,0.00016190867],"category_scores_gemma":[0.00005613773,0.00012458155,0.000092883565,0.000303519,0.000098002565,0.00013025913,0.0000259456,0.00034689717,0.000028333607],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019361793,0.00024932413,0.98274696,0.00007811585,0.000012113357,0.000005001711,0.00009961106,0.000007510873,0.01380449,0.000078730605,0.00044636935,0.0022781505],"study_design_scores_gemma":[0.00060524093,0.00014277072,0.97417384,0.00005863384,0.000035561185,0.000013044185,0.000070148046,0.00003049043,0.0011429723,0.0000892665,0.023521053,0.00011700357],"about_ca_topic_score_codex":0.027324216,"about_ca_topic_score_gemma":0.010644494,"teacher_disagreement_score":0.023074683,"about_ca_system_score_codex":0.00014916377,"about_ca_system_score_gemma":0.000049889775,"threshold_uncertainty_score":0.9791529},"labels":[],"label_agreement":null},{"id":"W2111240524","doi":"10.1086/500934","title":"Prognostic Factors for Death Due to Invasive Aspergillosis after Hematopoietic Stem Cell Transplantation: A 1-Year Retrospective Study of Consecutive Patients at French Transplantation Centers","year":2006,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"Pfizer","keywords":"Medicine; Hematopoietic stem cell transplantation; Transplantation; Aspergillosis; Retrospective cohort study; Internal medicine; Cause of death; Disease; Surgery; Pediatrics; Immunology","score_opus":0.020077835743835766,"score_gpt":0.2968568404949114,"score_spread":0.27677900475107564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111240524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99464226,0.000057934616,0.00044399378,0.000016282474,0.00018249887,0.0031592173,0.0012502549,0.00006300662,0.00018457185],"genre_scores_gemma":[0.9990676,0.00004919535,0.000015326152,0.00009530131,0.000054411685,0.00028151297,0.00032753675,0.000028344233,0.000080739526],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99783164,0.00017018501,0.0008019842,0.0005780022,0.00035176528,0.0002664143],"domain_scores_gemma":[0.9978358,0.0010033295,0.00021275225,0.00024624434,0.00045388157,0.00024800387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011268999,0.0002524673,0.0006750023,0.000099792174,0.00012027301,0.000015757863,0.00006527857,0.00011729897,0.000059785485],"category_scores_gemma":[0.00021935864,0.0002129101,0.0003570624,0.00020069434,0.000126828,0.00008420347,0.00001607584,0.00012279308,0.000011849127],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020113543,0.0059054294,0.9895005,0.00070612226,0.00013360279,0.000059207065,0.0014834019,0.000008731691,0.000033794964,0.000012139281,0.000115085946,0.000030592306],"study_design_scores_gemma":[0.0054511214,0.0051072673,0.98634744,0.00022367145,0.0013201904,0.0000019783224,0.0006897866,0.0000028873537,0.000561384,0.000091364964,0.0000020220261,0.00020086263],"about_ca_topic_score_codex":0.00014144873,"about_ca_topic_score_gemma":0.0011115375,"teacher_disagreement_score":0.0044253925,"about_ca_system_score_codex":0.00018542157,"about_ca_system_score_gemma":0.0001117263,"threshold_uncertainty_score":0.8682222},"labels":[],"label_agreement":null},{"id":"W2111289685","doi":"10.1186/1476-0711-8-25","title":"Antifungal treatment for invasive Candida infections: a mixed treatment comparison meta-analysis","year":2009,"lang":"en","type":"article","venue":"Annals of Clinical Microbiology and Antimicrobials","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver Infectious Diseases Centre; Simon Fraser University; Ottawa Hospital; University of Ottawa; McMaster University","funders":"","keywords":"Medical microbiology; Meta-analysis; Antifungal; Antifungal drugs; Invasive candidiasis; Parasitology; Medicine; Candida infections; Intensive care medicine; Antifungal drug; Internal medicine; Fluconazole; Biology; Microbiology; Immunology; Pathology","score_opus":0.3382888381427957,"score_gpt":0.489148416541387,"score_spread":0.15085957839859132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111289685","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903282,0.0032999164,0.0002495642,0.0041968017,0.00010770269,0.000972457,0.00069098856,0.00003224714,0.0001221284],"genre_scores_gemma":[0.9919926,0.0037351667,0.0007601534,0.0021994133,0.000097394826,0.000024310404,0.00038455965,0.000010678852,0.0007957454],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969564,0.00027968554,0.0016286406,0.0006915226,0.00004119887,0.00040254384],"domain_scores_gemma":[0.99689615,0.0015247582,0.0005816309,0.00045384903,0.000359124,0.00018448033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009187889,0.00035624148,0.0038292555,0.0001991273,0.00016046478,0.000016958142,0.00008282104,0.0003921259,0.00016085566],"category_scores_gemma":[0.00058220845,0.00023331869,0.0031757355,0.00027573179,0.0004333535,0.000060870236,0.000019037427,0.00012459485,0.00000937654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049335873,0.010111163,0.36644775,0.00013759141,0.18587294,0.000020955611,0.0002544132,0.000030406694,0.413104,0.00034592338,0.0106353685,0.00810592],"study_design_scores_gemma":[0.0063105184,0.021938905,0.285696,0.000048335904,0.17730486,0.000045635537,0.000118156146,0.00002094907,0.49470952,0.00036413164,0.012879476,0.00056351104],"about_ca_topic_score_codex":0.000109451765,"about_ca_topic_score_gemma":0.0006484716,"teacher_disagreement_score":0.081605524,"about_ca_system_score_codex":0.00001960098,"about_ca_system_score_gemma":0.00023693335,"threshold_uncertainty_score":0.951446},"labels":[],"label_agreement":null},{"id":"W2111608627","doi":"10.1139/w11-064","title":"Detection of<i>Aspergillus</i>in lung and other tissue samples using the MycAssay Aspergillus real-time PCR kit","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Aspergillus terreus; Aspergillus; Aspergillus fumigatus; Aspergillus flavus; Aspergillosis; Microbiology; Biology; Polymerase chain reaction; Pathology; Immunology; Medicine; Biochemistry","score_opus":0.03211581672011485,"score_gpt":0.25560016823241755,"score_spread":0.2234843515123027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111608627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99682283,0.0017857295,0.00018268335,0.000115780866,0.00013739621,0.00012413583,0.000031654894,0.0000022135791,0.0007975581],"genre_scores_gemma":[0.9988924,0.000078143756,0.00059120904,0.0001850598,0.000075505086,3.6229463e-7,0.0000014810487,0.000013197034,0.00016260087],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990536,0.00013951954,0.0003869373,0.00012963728,0.00003399903,0.0002562934],"domain_scores_gemma":[0.9992716,0.000069179696,0.00018894719,0.00016145503,0.00012547987,0.00018335198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053590763,0.00010760665,0.0003489118,0.0001872353,0.000073913194,0.0000049456626,0.000098667464,0.00014090443,0.00040852808],"category_scores_gemma":[0.00013172781,0.000074022435,0.0000697749,0.00012267333,0.0003477088,0.0000412693,0.00000951139,0.00021430614,0.0000034124619],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014910665,0.000012764017,0.0945141,0.000028674704,0.000054193377,0.000099937206,0.0009937701,0.0000024933752,0.9027672,0.00005081635,0.00013766823,0.0011893014],"study_design_scores_gemma":[0.003723737,0.0018022667,0.56479716,0.0008423223,0.0005773906,0.009605504,0.0032968335,0.00012782043,0.36033353,0.00044378082,0.053836383,0.0006133069],"about_ca_topic_score_codex":0.020690734,"about_ca_topic_score_gemma":0.08045114,"teacher_disagreement_score":0.5424337,"about_ca_system_score_codex":0.00015644064,"about_ca_system_score_gemma":0.00046133666,"threshold_uncertainty_score":0.98583055},"labels":[],"label_agreement":null},{"id":"W2112243625","doi":"10.1146/annurev.micro.61.080706.093341","title":"Morphogenesis in <i>Candida albicans</i>","year":2007,"lang":"en","type":"review","venue":"Annual Review of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":393,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Concordia University; Biotechnology Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Morphogenesis; Candida albicans; Biology; Microbiology; Genetics; Gene","score_opus":0.03525926191802086,"score_gpt":0.3819520019766546,"score_spread":0.3466927400586337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112243625","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000022818529,0.9956775,0.0000078338435,0.000069529175,0.00013876524,0.0014482918,0.0005438225,0.000015671012,0.0020757858],"genre_scores_gemma":[0.0000088230745,0.99617606,0.00019653881,0.0016445616,0.00008830273,0.000039851308,0.00074382935,0.000042799504,0.001059202],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99664265,0.0003272865,0.001799294,0.00062812323,0.00010640318,0.00049624394],"domain_scores_gemma":[0.9979899,0.00034011021,0.00057886343,0.0007537179,0.00021881533,0.00011858942],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013679303,0.00048125934,0.0051116454,0.00026257674,0.00001901033,0.0000015843833,0.00030458457,0.0005823063,0.0006661844],"category_scores_gemma":[0.00044541524,0.00033929918,0.0011124639,0.0006901092,0.00029620322,0.000028961776,0.000101822494,0.0005420005,0.00018363593],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002589053,0.00011900698,0.00008584405,0.2920137,0.000105332925,0.000086470696,0.00001084493,1.5282935e-9,0.00009599062,0.000023167204,0.0071244785,0.7003093],"study_design_scores_gemma":[0.00017036642,0.00017038878,0.000026268213,0.19330637,0.0007240134,0.00027294303,0.000011870305,3.581744e-9,0.000014096295,0.0000017782356,0.80510205,0.0001998163],"about_ca_topic_score_codex":0.00006398529,"about_ca_topic_score_gemma":0.00008374213,"teacher_disagreement_score":0.7979776,"about_ca_system_score_codex":0.00016798775,"about_ca_system_score_gemma":0.00075950037,"threshold_uncertainty_score":0.9999059},"labels":[],"label_agreement":null},{"id":"W2112677154","doi":"10.1099/jmm.0.47247-0","title":"Development of a simple model for studying the effects of antifungal agents on multicellular communities of Aspergillus fumigatus","year":2007,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":272,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Hospital for Sick Children; Pfizer","keywords":"Aspergillus fumigatus; Microbiology; Broth microdilution; Caspofungin; Voriconazole; Biology; Biofilm; Itraconazole; Amphotericin B; Spore; Antifungal; Antimicrobial; Bacteria; Minimum inhibitory concentration","score_opus":0.047223917360870095,"score_gpt":0.33669088053921814,"score_spread":0.289466963178348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112677154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986943,0.00066462695,0.011714453,0.00013935176,0.00019299496,0.00030918245,0.00000887853,0.0000022108118,0.000025307494],"genre_scores_gemma":[0.99556255,0.000116386924,0.00400041,0.0002250651,0.000050461134,0.0000013516805,0.000008368988,0.000009565069,0.000025859792],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99813247,0.00011008109,0.0011034729,0.00008321169,0.00033485534,0.00023589112],"domain_scores_gemma":[0.99725986,0.0014440854,0.0006101379,0.00020888068,0.00036545694,0.00011161236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029399097,0.00012159507,0.0007042838,0.00011549883,0.00006394044,0.000001344592,0.0003015939,0.00019455406,0.000034590514],"category_scores_gemma":[0.001053417,0.00007081714,0.0002149557,0.00008238731,0.00043715135,0.000018619887,0.000076052245,0.0004030157,4.3792363e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003060646,0.0012800479,0.02223819,0.0014952796,0.0005580996,0.0000396451,0.0067877835,0.000024919034,0.95396006,0.00014185873,0.00046565797,0.009947826],"study_design_scores_gemma":[0.01553824,0.0054244413,0.09795677,0.004092068,0.0006761027,0.00021311779,0.0129726725,0.004031855,0.8558919,0.00018309453,0.0027281637,0.000291571],"about_ca_topic_score_codex":0.000015967944,"about_ca_topic_score_gemma":0.00008483581,"teacher_disagreement_score":0.09806815,"about_ca_system_score_codex":0.000055625613,"about_ca_system_score_gemma":0.00037398154,"threshold_uncertainty_score":0.2887839},"labels":[],"label_agreement":null},{"id":"W2112746751","doi":"10.1182/asheducation-2006.1.361","title":"Of Yeasts and Hyphae: A Hematologist’s Approach to Antifungal Therapy","year":2006,"lang":"en","type":"review","venue":"Hematology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre","funders":"","keywords":"Medicine; Intensive care medicine; Antifungal; Disease; Immunosuppression; Antimicrobial; Chemoprophylaxis; Invasive candidiasis; Internal medicine; Fluconazole; Oncology; Immunology; Biology; Dermatology","score_opus":0.08449588275805278,"score_gpt":0.36850063170230085,"score_spread":0.2840047489442481,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112746751","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012741565,0.989697,0.00028615666,0.000049149156,0.000088469555,0.0013652251,0.0000346098,0.000054085594,0.0071511697],"genre_scores_gemma":[0.0051255175,0.99149185,0.002133787,0.00009302319,0.000052956297,0.00010384753,0.00010088351,0.000056498393,0.000841647],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99758816,0.00016155036,0.0008962431,0.00071506196,0.00023092079,0.00040804126],"domain_scores_gemma":[0.9984988,0.00019843003,0.00031917996,0.0007042963,0.00010664787,0.00017262124],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000281963,0.00044850272,0.004001209,0.00025030176,0.000042890664,0.000008135644,0.00017505507,0.00061317394,0.000037788417],"category_scores_gemma":[0.00015644038,0.00031967324,0.00043395572,0.00035145474,0.00033944388,0.00002526603,0.00009221588,0.00036644383,0.000034973702],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005142844,0.0024526443,0.014312749,0.20601864,0.00094026775,0.00068518665,0.000177814,1.4336926e-7,0.000026520602,0.040601794,0.023841036,0.7104289],"study_design_scores_gemma":[0.0007543075,0.00026945866,0.00082793465,0.0045388495,0.0005117063,0.004956545,0.00004201319,0.0000028506129,0.000046618414,0.000120109355,0.98750895,0.00042064307],"about_ca_topic_score_codex":0.000024269762,"about_ca_topic_score_gemma":0.000008008895,"teacher_disagreement_score":0.9636679,"about_ca_system_score_codex":0.000037013524,"about_ca_system_score_gemma":0.00029901447,"threshold_uncertainty_score":0.99992555},"labels":[],"label_agreement":null},{"id":"W2112759994","doi":"10.1128/iai.00161-06","title":"Alcohol Dehydrogenase Restricts the Ability of the Pathogen <i>Candida albicans</i> To Form a Biofilm on Catheter Surfaces through an Ethanol-Based Mechanism","year":2006,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":143,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of Dental and Craniofacial Research; National Cancer Institute; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Stanford Diabetes Research Center; National Institute of Allergy and Infectious Diseases; Bristol-Myers Squibb","keywords":"Biofilm; Candida albicans; Microbiology; Corpus albicans; Alcohol dehydrogenase; In vivo; Biology; In vitro; Ethanol; Acetaldehyde; Bacteria; Biochemistry","score_opus":0.023446119362647413,"score_gpt":0.283554618830219,"score_spread":0.2601084994675716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112759994","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996172,0.000051949417,0.00030783718,0.0007094888,0.000103005594,0.00067568937,0.00005375517,0.000040539653,0.0018857517],"genre_scores_gemma":[0.99868727,0.000032639542,0.000060375623,0.001077463,0.0000308482,0.000020877585,0.000018424596,0.000011863075,0.000060241277],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987842,0.00029496392,0.00026982347,0.00022390939,0.00023155773,0.0001955687],"domain_scores_gemma":[0.9987954,0.00013914243,0.000104015315,0.00077280955,0.00012296106,0.000065665336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000595813,0.00015671605,0.00021724352,0.000036372614,0.00037592035,0.000021684406,0.000107542415,0.00010896117,0.000047770656],"category_scores_gemma":[0.0001684797,0.000086178734,0.00014229046,0.00031956428,0.00019299002,0.000106006104,0.000043289365,0.000285702,0.0000047149842],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068345346,0.0011773729,0.16426146,0.000090296664,0.000034775137,0.0000020494533,0.0007296208,0.00005906536,0.83076173,0.00076756405,0.00014334914,0.0012892543],"study_design_scores_gemma":[0.0007503166,0.00084836694,0.6636391,0.000058736645,0.000063089625,0.0000063219527,0.00011052403,0.00014367522,0.33088452,0.0016941002,0.0016857288,0.00011549063],"about_ca_topic_score_codex":0.010065137,"about_ca_topic_score_gemma":0.0019741645,"teacher_disagreement_score":0.4998772,"about_ca_system_score_codex":0.00007524276,"about_ca_system_score_gemma":0.00009643231,"threshold_uncertainty_score":0.9965269},"labels":[],"label_agreement":null},{"id":"W2113029574","doi":"10.1086/368210","title":"Fungal Peritonitis Complicating Peritoneal Dialysis during an 11‐Year Period: Report of 46 Cases","year":2003,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Alberta","keywords":"Medicine; Peritoneal dialysis; Peritonitis; Incidence (geometry); Surgery; Dialysis; Complication","score_opus":0.04415900718955506,"score_gpt":0.37871416967772104,"score_spread":0.33455516248816597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113029574","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964591,0.00039905438,0.000041387742,0.000064526124,0.00027395555,0.00034367124,0.000083558814,0.00017403156,0.002160668],"genre_scores_gemma":[0.9987954,0.000121793164,0.00014787375,0.00009335809,0.00044079975,0.000034707016,0.000067242836,0.000037990118,0.00026083208],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970066,0.00035514886,0.001200415,0.00069691055,0.00037286876,0.000368046],"domain_scores_gemma":[0.9973076,0.00047343978,0.0003484497,0.00092352834,0.00036968925,0.00057730405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005009128,0.000244421,0.00091623684,0.00008466922,0.0003001293,0.000043328684,0.000098884986,0.00016720923,0.0006889559],"category_scores_gemma":[0.006387377,0.00022548648,0.0006545479,0.00027793567,0.0006271275,0.000160692,0.00004995636,0.0002907161,0.000021378688],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016362891,0.0016902328,0.9947032,0.00022568385,0.000113675706,0.0013399462,0.000064004256,0.0000034354653,0.0007811082,0.0001438894,0.00009395805,0.00067725894],"study_design_scores_gemma":[0.0012747513,0.00064688036,0.9949401,0.000099708064,0.0004493219,0.00070596766,0.0005730786,0.000027991313,0.00050803093,0.00007441674,0.00046659572,0.0002331304],"about_ca_topic_score_codex":0.00013386253,"about_ca_topic_score_gemma":0.00021462096,"teacher_disagreement_score":0.0058864644,"about_ca_system_score_codex":0.000082158214,"about_ca_system_score_gemma":0.00034095286,"threshold_uncertainty_score":0.9195072},"labels":[],"label_agreement":null},{"id":"W2113054618","doi":"10.1099/mic.0.28626-0","title":"Multiple gene genealogical analyses suggest divergence and recent clonal dispersal in the opportunistic human pathogen Candida guilliermondii","year":2006,"lang":"en","type":"article","venue":"Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Gene; Biological dispersal; Genetics; Pathogen; Yeast; Genetic divergence; Ploidy; Phylogenetic tree; Evolutionary biology; Genetic diversity","score_opus":0.05745274843919867,"score_gpt":0.3260085501931338,"score_spread":0.2685558017539351,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113054618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972309,0.0012570858,0.00008897317,0.00046435787,0.00005206395,0.00025007094,0.00033644852,0.000014605541,0.000305478],"genre_scores_gemma":[0.99734956,0.00031212313,0.00014741733,0.0004184527,0.000104976134,0.000011726223,0.0014693681,0.000007394383,0.00017898774],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99873793,0.00018579667,0.0003101816,0.00037752543,0.000066496155,0.00032206776],"domain_scores_gemma":[0.9994438,0.00012236531,0.000060597715,0.0002641607,0.000046477246,0.00006258648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003133649,0.00016012574,0.00032352525,0.000051752373,0.00015097168,0.00001095917,0.0001318761,0.00013551222,0.0001941593],"category_scores_gemma":[0.00009878555,0.00009649938,0.00006769556,0.00013084407,0.00037666745,0.000016554839,0.000066263994,0.00018326059,0.00001107773],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000824717,0.00008191219,0.45130983,0.000009642915,0.000009776353,0.00013868976,0.00004343188,0.0000014455019,0.5474662,0.00008833309,0.0005671177,0.00020113106],"study_design_scores_gemma":[0.0009625923,0.00030656694,0.9836659,0.0000119781935,0.00008266436,0.0001905419,0.00012484884,0.000052286337,0.0040197014,0.000093294286,0.010327698,0.00016192943],"about_ca_topic_score_codex":0.0010692751,"about_ca_topic_score_gemma":0.004528137,"teacher_disagreement_score":0.54344654,"about_ca_system_score_codex":0.000062247775,"about_ca_system_score_gemma":0.00005134671,"threshold_uncertainty_score":0.39351305},"labels":[],"label_agreement":null},{"id":"W2113354272","doi":"10.1111/myc.12289","title":"Successful long‐term management of invasive cerebral fungal infection following liver transplantation","year":2015,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Voriconazole; Liver transplantation; Posaconazole; Mucormycosis; Scedosporium apiospermum; Cryptococcosis; Medicine; Transplantation; Cryptococcus; Biology; Intensive care medicine; Antifungal; Immunology; Pathology; Dermatology; Internal medicine; Microbiology","score_opus":0.03316516570377709,"score_gpt":0.2943511432639331,"score_spread":0.261185977560156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113354272","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99279314,0.00034988602,0.00087866065,0.000030644725,0.00018062558,0.00027503353,0.0000064934347,0.000039497005,0.005445995],"genre_scores_gemma":[0.9986544,0.00044086706,0.00025288857,0.000052693926,0.00005222039,0.000008669829,0.000044635774,0.000009679791,0.00048393803],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99916893,0.000035170142,0.00019538123,0.00017795092,0.00028097592,0.00014158135],"domain_scores_gemma":[0.9995803,0.000032675878,0.000057597757,0.00016169688,0.00008016595,0.00008752595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017022085,0.00009701804,0.00018859172,0.00006168754,0.000035958874,0.0000107417245,0.00004167692,0.000053345786,0.00006445943],"category_scores_gemma":[0.00002866273,0.00008453839,0.000114966206,0.00013085574,0.000034720866,0.00018307408,0.00001486565,0.000072474766,0.000031426607],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042384365,0.00013828468,0.9925608,0.0009802905,0.0001078037,0.0005836965,0.0005310313,0.000004553735,0.0010179406,0.0001006026,0.00014345974,0.0034076776],"study_design_scores_gemma":[0.0012771039,0.00022518555,0.98121256,0.0003450332,0.0002917572,0.000026527892,0.00025165317,0.000010113215,0.016190613,0.000054431235,0.000031854095,0.000083188184],"about_ca_topic_score_codex":0.00017600557,"about_ca_topic_score_gemma":0.00039668003,"teacher_disagreement_score":0.015172672,"about_ca_system_score_codex":0.00007080796,"about_ca_system_score_gemma":0.000056092696,"threshold_uncertainty_score":0.34473756},"labels":[],"label_agreement":null},{"id":"W2113614834","doi":"10.1128/aac.02615-13","title":"Multilaboratory Study of Epidemiological Cutoff Values for Detection of Resistance in Eight Candida Species to Fluconazole, Posaconazole, and Voriconazole","year":2014,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; University of Alberta","funders":"","keywords":"Posaconazole; Voriconazole; Fluconazole; Candida dubliniensis; Microbiology; Biology; Broth microdilution; Population; Corpus albicans; Veterinary medicine; Candida albicans; Antifungal; Minimum inhibitory concentration; Medicine; Antimicrobial","score_opus":0.01770889992021543,"score_gpt":0.2885097171148796,"score_spread":0.2708008171946642,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113614834","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99808306,0.00009388271,0.0004041329,0.00043348223,0.00005487187,0.0007742426,0.000034396504,0.000009431078,0.00011250543],"genre_scores_gemma":[0.99751985,0.00031359636,0.0005660708,0.0012643589,0.000053524796,0.000011931165,0.0000058189803,0.000013155372,0.000251716],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99884397,0.00007114992,0.00044553034,0.00033796724,0.00010731669,0.00019406392],"domain_scores_gemma":[0.9993389,0.00013578289,0.000131702,0.00018214391,0.00013191544,0.000079518104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042632283,0.00016063078,0.000585252,0.00008908211,0.000057553418,0.0000071224413,0.000059640046,0.000092426344,0.000014465046],"category_scores_gemma":[0.00012400844,0.00012694299,0.000055644134,0.00015523365,0.0001228506,0.000048309914,0.00002266376,0.00008432083,3.7573741e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022592728,0.000735189,0.7089265,0.00026240153,0.000058521837,0.0000017452293,0.0013038624,0.0000021076487,0.2824296,0.00006324321,0.0010204427,0.002937102],"study_design_scores_gemma":[0.0034541423,0.00072066206,0.92754334,0.00010188445,0.000030237892,9.10391e-7,0.00041209385,0.000064156804,0.06498605,0.00008482004,0.002480875,0.00012082681],"about_ca_topic_score_codex":0.0001113948,"about_ca_topic_score_gemma":0.0005789038,"teacher_disagreement_score":0.21861683,"about_ca_system_score_codex":0.00002435709,"about_ca_system_score_gemma":0.000023240547,"threshold_uncertainty_score":0.51765853},"labels":[],"label_agreement":null},{"id":"W2113627544","doi":"10.1128/ec.00183-06","title":"Transcriptional Activation Domains of the <i>Candida albicans</i> Gcn4p and Gal4p Homologs","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; McGill University","funders":"","keywords":"Saccharomyces cerevisiae; Biology; Candida albicans; Transcription factor; Transcription (linguistics); DNA-binding domain; Genetics; Yeast; Gene","score_opus":0.005074498948036181,"score_gpt":0.2009853920840001,"score_spread":0.1959108931359639,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113627544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.980498,0.00024426763,0.00053651223,0.0008001299,0.0000708493,0.00022365851,0.000013074887,0.00001411725,0.017599357],"genre_scores_gemma":[0.9945171,0.000022870945,0.00020726708,0.000286831,0.000074927004,0.0000035118055,0.000017077076,0.000008268772,0.0048621534],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99922544,0.000035972775,0.00019933018,0.00017207464,0.00022850205,0.00013866184],"domain_scores_gemma":[0.9995659,0.000066233886,0.00006138395,0.00021545615,0.000050850493,0.00004015939],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001263522,0.00009099286,0.00016873682,0.0000265728,0.00007256092,0.0000057110187,0.00005577944,0.00005960093,0.000189908],"category_scores_gemma":[0.000020960646,0.000061949104,0.000088047134,0.00012658701,0.0002038235,0.00004604829,0.000013007282,0.00012460296,0.0000043623363],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019169663,0.00029762456,0.85412985,0.00015908743,0.000012816311,0.00000461082,0.00012787078,0.000008263546,0.14093804,0.0015844759,0.0022320116,0.00031364034],"study_design_scores_gemma":[0.0008428081,0.00007503863,0.9737189,0.00004249519,0.000050764163,0.000007882538,0.00008218864,0.000028977904,0.023454145,0.0007844096,0.0008526485,0.000059781458],"about_ca_topic_score_codex":0.00024046603,"about_ca_topic_score_gemma":0.000102301354,"teacher_disagreement_score":0.11958901,"about_ca_system_score_codex":0.00003788175,"about_ca_system_score_gemma":0.00008333672,"threshold_uncertainty_score":0.2526211},"labels":[],"label_agreement":null},{"id":"W2114146849","doi":"10.1128/aac.49.11.4536-4545.2005","title":"Pharmacokinetics, Safety, and Tolerability of Caspofungin in Children and Adolescents","year":2005,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":239,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Georgetown Hospital","funders":"Merck","keywords":"Caspofungin; Regimen; Pharmacokinetics; Tolerability; Dosing; Medicine; Neutropenia; Adverse effect; Area under the curve; Body surface area; Internal medicine; Toxicity; Pharmacology; Gastroenterology; Antifungal; Voriconazole","score_opus":0.006843523792836222,"score_gpt":0.2608551712062994,"score_spread":0.2540116474134632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114146849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997579,0.00025919836,0.00001780976,0.0016809296,0.000016077753,0.00032972335,0.000025809513,0.000009478566,0.00008198074],"genre_scores_gemma":[0.99059075,0.006485248,0.00024020045,0.0024985345,0.0000524972,5.57051e-7,0.000010413515,0.0000121179255,0.00010969246],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991516,0.00002162252,0.00028339008,0.0002837306,0.00008542635,0.00017423855],"domain_scores_gemma":[0.9996907,0.000009504512,0.000054365886,0.00012924164,0.000030105615,0.000086094326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001493653,0.00013618483,0.00033060537,0.00004766792,0.00003483854,0.0000103299235,0.00003612158,0.00007005923,0.00006771245],"category_scores_gemma":[0.000008161344,0.00011813988,0.00003436849,0.00006958344,0.00017701685,0.000058205373,0.000030720134,0.000112069334,9.2809154e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066371536,0.00026659563,0.9492977,0.0001096237,0.000029135323,0.0000018122857,0.00025760496,6.473218e-7,0.012279768,0.00000586907,0.00057303364,0.03651448],"study_design_scores_gemma":[0.0035380484,0.0000694238,0.9873622,0.00014148373,0.000024054041,0.000021843005,0.000015922042,0.0000763158,0.0073433705,0.00000866357,0.0012928409,0.00010583395],"about_ca_topic_score_codex":0.00011346909,"about_ca_topic_score_gemma":0.00004623712,"teacher_disagreement_score":0.038064484,"about_ca_system_score_codex":0.000019119258,"about_ca_system_score_gemma":0.000017637449,"threshold_uncertainty_score":0.4817604},"labels":[],"label_agreement":null},{"id":"W2114168745","doi":"10.1016/j.drup.2015.08.001","title":"International expert opinion on the management of infection caused by azole-resistant Aspergillus fumigatus","year":2015,"lang":"en","type":"article","venue":"Drug Resistance Updates","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":330,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Sanofi Pasteur; Astellas Foundation for Research on Metabolic Disorders; Astellas Pharma; Bundesministerium für Bildung und Forschung; Cidara Therapeutics; National Institute of Allergy and Infectious Diseases; Medical Research Council; Celgene; Pfizer; Dainippon Sumitomo Pharma; Janssen Pharmaceuticals; Gilead Sciences; Radboud Universiteit; Sanofi; European Commission; Viropharma; Bristol-Myers Squibb","keywords":"Azole; Voriconazole; Micafungin; Aspergillosis; Aspergillus fumigatus; Itraconazole; Echinocandin; Medicine; Intensive care medicine; Drug resistance; Aspergillus; Amphotericin B; Esophageal candidiasis; Microbiology; Biology; Antifungal; Immunology; Fluconazole; Dermatology","score_opus":0.02548187277548414,"score_gpt":0.29582742481636504,"score_spread":0.2703455520408809,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114168745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8872639,0.0048232377,0.00027233787,0.01291122,0.0012429559,0.0009131014,0.00010365147,0.0001490778,0.09232054],"genre_scores_gemma":[0.99052674,0.0024681902,0.00025093963,0.0005241955,0.00011813731,0.000046989066,0.00014674268,0.000024189236,0.0058938568],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99813396,0.00007683423,0.00040692594,0.00037472483,0.00075085723,0.0002567151],"domain_scores_gemma":[0.9988011,0.00007678089,0.00016680574,0.000571263,0.00024775232,0.00013629299],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005041565,0.00020838421,0.00027773346,0.00007283226,0.00009923992,0.00003187878,0.00018986453,0.00006835489,0.000160784],"category_scores_gemma":[0.000085234686,0.00014389452,0.00012696953,0.00023486912,0.0001733259,0.00011641787,0.000062791674,0.00018133757,0.000041877043],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008996502,0.0015089838,0.031473152,0.00052418356,0.0011047171,0.000079424884,0.0020060723,0.000026578473,0.02239121,0.046996556,0.87996256,0.004930051],"study_design_scores_gemma":[0.0023148141,0.00015028156,0.061385144,0.00084792793,0.000045966797,0.0000015463221,0.0019379138,0.00009504702,0.034174062,0.000839199,0.8978859,0.00032215271],"about_ca_topic_score_codex":0.00007871979,"about_ca_topic_score_gemma":0.000089016554,"teacher_disagreement_score":0.10326289,"about_ca_system_score_codex":0.00026726144,"about_ca_system_score_gemma":0.000057133813,"threshold_uncertainty_score":0.5867848},"labels":[],"label_agreement":null},{"id":"W2114409750","doi":"10.1128/mmbr.00045-10","title":"Regulatory Circuitry Governing Fungal Development, Drug Resistance, and Disease","year":2011,"lang":"en","type":"review","venue":"Microbiology and Molecular Biology Reviews","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":569,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Cryptococcus neoformans; Candida albicans; Aspergillus fumigatus; Antifungal drug; Virulence; Signal transduction; Drug resistance; Efflux; Corpus albicans; Morphogenesis; Microbiology; Cryptococcosis; Virulence factor; Cell biology; Genetics; Gene","score_opus":0.03458673767475633,"score_gpt":0.31528561169472563,"score_spread":0.2806988740199693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114409750","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010398927,0.99637926,0.00017073391,0.00003283538,0.00014506339,0.0013888947,0.00008640045,0.00004018252,0.00071676425],"genre_scores_gemma":[0.00012798156,0.9932599,0.0010108406,0.00065642333,0.000060683557,0.00013087885,0.000847191,0.000050451657,0.0038556291],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963441,0.00083981187,0.0010539584,0.0012011352,0.00003286233,0.00052817195],"domain_scores_gemma":[0.998209,0.000086349086,0.0005222416,0.00071809447,0.000054617638,0.00040969494],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00094944023,0.0007027843,0.003046819,0.00014020281,0.00019779408,0.000010731834,0.00019211123,0.0007170785,0.000078284844],"category_scores_gemma":[0.0003549883,0.00050714053,0.0004673882,0.0001447683,0.0008382322,0.000029682862,0.00022435891,0.0007056444,0.00010577354],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002098681,0.00015187626,0.0053395033,0.06506489,0.0008071158,0.00030517302,0.00012540387,5.698307e-10,0.0025694896,0.002859419,0.007567981,0.9149993],"study_design_scores_gemma":[0.00028338123,0.000030702136,0.00032566625,0.008664979,0.0011936786,0.00020972422,0.0000038596568,9.430179e-9,0.00001791995,0.000083691324,0.9887169,0.00046946356],"about_ca_topic_score_codex":0.0000014827206,"about_ca_topic_score_gemma":0.000019685811,"teacher_disagreement_score":0.98114896,"about_ca_system_score_codex":0.00007753123,"about_ca_system_score_gemma":0.00062282797,"threshold_uncertainty_score":0.99973804},"labels":[],"label_agreement":null},{"id":"W2114733271","doi":"10.1128/aac.46.10.3236-3242.2002","title":"Comparative Evaluation of a New Fluorescent Carboxyfluorescein Diacetate-Modified Microdilution Method for Antifungal Susceptibility Testing of <i>Candida albicans</i> Isolates","year":2002,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Alberta Hospital; University of Alberta","funders":"","keywords":"Broth microdilution; Candida albicans; Flucytosine; Fluconazole; Minimum inhibitory concentration; Serial dilution; Itraconazole; Chromatography; Ketoconazole; Microbiology; Miconazole; Chemistry; Biology; Antifungal; Antimicrobial; Medicine","score_opus":0.09374997378240633,"score_gpt":0.352534330141967,"score_spread":0.25878435635956065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114733271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99426293,0.00027199436,0.0029367018,0.00056458596,0.000076027514,0.0014275617,0.00009755752,0.000022414697,0.0003402112],"genre_scores_gemma":[0.98381007,0.00023734129,0.01516001,0.00045513522,0.00008035138,0.000009180147,0.00004985771,0.000022633774,0.00017540948],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816287,0.000107370244,0.0006331028,0.00049029046,0.00030279614,0.00030355537],"domain_scores_gemma":[0.99846095,0.00014695509,0.00033189784,0.00031954862,0.0006153803,0.0001252583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083556044,0.00025653475,0.00077556906,0.00008493134,0.00010033117,0.000017455386,0.00009560046,0.00013460004,0.00018938248],"category_scores_gemma":[0.0001354945,0.0002208473,0.00020489517,0.0002608198,0.00020259217,0.00009047108,0.000022078653,0.00012720514,0.0000012848795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011326496,0.00067104574,0.079311416,0.0003801679,0.00021138234,5.229757e-7,0.0018415871,0.000034245804,0.87616533,0.00002175305,0.008618888,0.031611007],"study_design_scores_gemma":[0.010543724,0.0008751104,0.2506681,0.00045435847,0.0005365815,0.000010510261,0.00027235874,0.047257278,0.68767864,0.00022685998,0.0010963117,0.00038019122],"about_ca_topic_score_codex":0.0005734477,"about_ca_topic_score_gemma":0.00010882078,"teacher_disagreement_score":0.18848671,"about_ca_system_score_codex":0.00007706671,"about_ca_system_score_gemma":0.00013417145,"threshold_uncertainty_score":0.90058917},"labels":[],"label_agreement":null},{"id":"W2114915363","doi":"10.1086/510535","title":"Pathogenesis of <i>Aspergillus fumigatus</i> and the Kinetics of Galactomannan in an In Vitro Model of Early Invasive Pulmonary Aspergillosis: Implications for Antifungal Therapy","year":2007,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":129,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Institutes of Health; Simon Fraser University","keywords":"Aspergillus fumigatus; Galactomannan; Amphotericin B; Aspergillosis; Antifungal drug; Pathogenesis; Microbiology; Biology; Immunology; Antifungal","score_opus":0.020824648616121124,"score_gpt":0.2856979314896316,"score_spread":0.2648732828735105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114915363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946482,0.0038502335,0.0006152358,0.0001977264,0.000022680762,0.0004961217,0.00010066257,0.000003731876,0.000065379674],"genre_scores_gemma":[0.99694943,0.0028187304,0.00007831687,0.00008841806,0.00003523467,0.0000064587293,0.000003878563,0.000015161803,0.000004367878],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985786,0.00014749289,0.0007854104,0.000105678206,0.00021342456,0.00016938715],"domain_scores_gemma":[0.99785644,0.0007076306,0.00053547963,0.00029851336,0.00051177957,0.00009018725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008547702,0.00012898227,0.0005209749,0.00018824561,0.000039339757,0.000004572017,0.00014812186,0.0000632091,0.0000024351127],"category_scores_gemma":[0.00033764896,0.00007325934,0.00019868578,0.00029138505,0.00042288547,0.0001111204,0.000023270193,0.0001371457,3.6270805e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007965344,0.00077458227,0.50494605,0.0000920039,0.000049087936,0.0000021785802,0.00045283878,0.00015899116,0.48337227,0.000089188274,0.000003938505,0.0020935226],"study_design_scores_gemma":[0.0029322724,0.00088809786,0.91342187,0.00014318842,0.00019254943,0.000023983472,0.00045712013,0.00019232661,0.079797186,0.001887572,0.0000010212184,0.000062799845],"about_ca_topic_score_codex":0.0000888407,"about_ca_topic_score_gemma":0.00019361828,"teacher_disagreement_score":0.40847585,"about_ca_system_score_codex":0.000041644813,"about_ca_system_score_gemma":0.00016065147,"threshold_uncertainty_score":0.2987429},"labels":[],"label_agreement":null},{"id":"W2115230325","doi":"10.1111/j.1542-4758.2007.00208.x","title":"Secondary sternal <i>Aspergillus</i> osteomyelitis in a diabetic hemodialysis patient with previous allograft rejection","year":2007,"lang":"en","type":"article","venue":"Hemodialysis International","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Caspofungin; Aspergillus terreus; Aspergillosis; Hemodialysis; Amphotericin B; Surgery; Debridement (dental); Mucormycosis; Antifungal; Osteomyelitis; Aspergillus; Dermatology; Microbiology; Immunology","score_opus":0.007821820234159478,"score_gpt":0.2462041650290514,"score_spread":0.23838234479489193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115230325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9698585,0.00020861116,0.0032221167,0.0006626691,0.00028881425,0.000402621,0.0000318,0.00005621375,0.025268616],"genre_scores_gemma":[0.99505967,0.000085102576,0.0020436482,0.00076006405,0.00039908141,0.000029714634,0.00017749032,0.000031771724,0.0014134469],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997168,0.00007816061,0.00075008546,0.00063171895,0.000925887,0.00044612586],"domain_scores_gemma":[0.998653,0.00015436937,0.00020993335,0.00042552783,0.000353296,0.00020388277],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00066808914,0.00027310435,0.0005221072,0.0005273522,0.00007372034,0.00005132246,0.00017638247,0.00014991769,0.0011244975],"category_scores_gemma":[0.00016613405,0.00023381259,0.0002914934,0.00057488726,0.00014340195,0.00022998656,0.00006826145,0.0004087593,0.000073820636],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002470546,0.00051841483,0.8320674,0.00007355504,0.00054230634,0.00076614704,0.0010109828,0.00012367855,0.008049416,0.00010640435,0.0003711069,0.15390004],"study_design_scores_gemma":[0.0061281086,0.00084734743,0.95159924,0.00039977464,0.00045868626,0.00035518012,0.00094600214,0.0011763416,0.016402962,0.00025038086,0.020768467,0.0006675192],"about_ca_topic_score_codex":0.00026083514,"about_ca_topic_score_gemma":0.0023237763,"teacher_disagreement_score":0.15323253,"about_ca_system_score_codex":0.00055206474,"about_ca_system_score_gemma":0.00016542045,"threshold_uncertainty_score":0.9997886},"labels":[],"label_agreement":null},{"id":"W2115370961","doi":"10.1128/mcb.01461-08","title":"High-Affinity Transporters for NAD <sup>+</sup> Precursors in <i>Candida glabrata</i> Are Regulated by Hst1 and Induced in Response to Niacin Limitation","year":2009,"lang":"en","type":"article","venue":"Molecular and Cellular Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Niacin; Candida glabrata; NAD+ kinase; Biology; Transporter; Mutant; Auxotrophy; Gene; Membrane transport protein; Biochemistry; Microbiology; Candida albicans; Enzyme","score_opus":0.009063082821750668,"score_gpt":0.24701946069401076,"score_spread":0.2379563778722601,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115370961","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99468917,0.0010096554,0.0012815377,0.0021651553,0.000019433535,0.0007555879,0.000046161807,0.000018128925,0.0000151570985],"genre_scores_gemma":[0.9981723,0.00003698203,0.00035802324,0.0010704461,0.000011746289,0.000026620015,0.00025909886,0.000012869232,0.000051901407],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986041,0.00023046644,0.00031968654,0.0004319564,0.00007864064,0.00033512973],"domain_scores_gemma":[0.9994657,0.000082630366,0.000053383686,0.0002010127,0.00004150967,0.00015575532],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005772837,0.00018286885,0.00040015805,0.00015812529,0.000039442253,0.000008946403,0.000050235787,0.00025699782,0.000004606232],"category_scores_gemma":[0.00017929573,0.00017126683,0.00005036871,0.0002481701,0.00006308254,0.000041055915,0.000009390455,0.00016964546,0.0000012237921],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0051995288,0.00016583978,0.046373885,0.000047330297,0.000015737278,0.000052028627,0.0008749845,0.000013827404,0.9443802,0.00011481564,0.000076724966,0.0026851043],"study_design_scores_gemma":[0.008487009,0.0034516281,0.5645576,0.0002248743,0.000110499015,0.000013191357,0.0012550992,0.0003099053,0.41863135,0.001034434,0.0013509074,0.0005734932],"about_ca_topic_score_codex":0.00010442029,"about_ca_topic_score_gemma":0.00015568628,"teacher_disagreement_score":0.52574885,"about_ca_system_score_codex":0.000050277344,"about_ca_system_score_gemma":0.000045954974,"threshold_uncertainty_score":0.69840586},"labels":[],"label_agreement":null},{"id":"W2116536284","doi":"10.1038/msb.2011.31","title":"Cross‐species discovery of syncretic drug combinations that potentiate the antifungal fluconazole","year":2011,"lang":"en","type":"article","venue":"Molecular Systems Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":185,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Fluconazole; Biology; Antifungal; Antifungal drug; Drug; Drug discovery; Computational biology; Antifungal drugs; Pharmacology; Microbiology; Bioinformatics","score_opus":0.030672177066206924,"score_gpt":0.2708982046889418,"score_spread":0.2402260276227349,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116536284","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98136264,0.002888017,0.0064866813,0.000148756,0.00045959224,0.00046094702,0.00005067304,0.000031341082,0.008111366],"genre_scores_gemma":[0.994242,0.000053885004,0.000035272074,0.00009089693,0.000029675783,0.00002304042,0.000037391783,0.000015635707,0.0054721846],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986652,0.00023329069,0.00037090655,0.00028962345,0.00017244987,0.0002685411],"domain_scores_gemma":[0.9989392,0.00006342943,0.00016781903,0.0006045278,0.0001726069,0.00005237551],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039383516,0.00015584815,0.0004001607,0.00006686229,0.00011378687,0.00003330509,0.00020978074,0.00011628106,0.000047231075],"category_scores_gemma":[0.00011519965,0.00009803048,0.00020121883,0.00013607494,0.00062178075,0.0000816569,0.00007806772,0.0001610685,0.000019998717],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017746909,0.00023637562,0.6074465,0.00026977985,0.00023687436,0.00006937005,0.0004406708,0.0000020539828,0.315693,0.0751369,0.00019785446,0.00009314494],"study_design_scores_gemma":[0.0011714975,0.00026161864,0.8563471,0.00015967026,0.00017893405,0.00007307906,0.0011935396,0.00013437353,0.13844965,0.0007440739,0.0010691393,0.0002173393],"about_ca_topic_score_codex":0.00032713893,"about_ca_topic_score_gemma":0.000025988236,"teacher_disagreement_score":0.24890056,"about_ca_system_score_codex":0.000030261628,"about_ca_system_score_gemma":0.00007055586,"threshold_uncertainty_score":0.3997567},"labels":[],"label_agreement":null},{"id":"W2117110882","doi":"10.1128/iai.72.1.414-429.2004","title":"GeneExpression in HL60 Granulocytoids and Human PolymorphonuclearLeukocytes Exposed to<i>Candidaalbicans</i>†","year":2003,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec; Université de Montréal; McGill University Health Centre; Biotechnology Research Institute","funders":"","keywords":"Candida albicans; Biology; Corpus albicans; Effector; Microbiology; HL60; Population; Gene expression; Hypha; Dimorphic fungus; Gene; Pathogen; Yeast; Cell biology; Cell; Genetics; Medicine","score_opus":0.018473069085639338,"score_gpt":0.28386057430234063,"score_spread":0.2653875052167013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117110882","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953773,0.00026477152,0.00007332902,0.00006543818,0.000055551078,0.00023095455,0.0000019961017,0.000038638067,0.003892012],"genre_scores_gemma":[0.9989772,0.00018830354,0.00009611506,0.0003390782,0.00001647402,0.000008555086,0.0000042164997,0.00001068253,0.00035936688],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992215,0.00011480678,0.00019429589,0.00019467455,0.000102618265,0.00017207212],"domain_scores_gemma":[0.99953735,0.000033322645,0.00003076086,0.00021417196,0.00004042817,0.00014396817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031819672,0.00011808157,0.00021317495,0.0001346943,0.0002188582,0.000026902982,0.00002154091,0.00008561424,0.00016226889],"category_scores_gemma":[0.00013296497,0.00010365088,0.000034704357,0.00019395808,0.0000938144,0.000094581315,0.000028167457,0.00023619896,0.00000705618],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014550822,0.00012644356,0.6769438,0.00003950082,0.000006868548,0.0000047643,0.0003849566,4.8953393e-7,0.3192266,0.00023565914,0.000086244545,0.0027991834],"study_design_scores_gemma":[0.0012818894,0.00035908676,0.94319826,0.00008553308,0.000012551719,0.000024173147,0.00022783644,0.0000057646866,0.051221486,0.00013672865,0.0033363565,0.00011034043],"about_ca_topic_score_codex":0.0014025478,"about_ca_topic_score_gemma":0.00065926654,"teacher_disagreement_score":0.26800513,"about_ca_system_score_codex":0.000058120666,"about_ca_system_score_gemma":0.000033042175,"threshold_uncertainty_score":0.422676},"labels":[],"label_agreement":null},{"id":"W2117125304","doi":"10.4212/cjhp.v62i6.845","title":"Role of Therapeutic Drug Monitoring of Voriconazole in the Treatment of Invasive Fungal Infections","year":2009,"lang":"en","type":"article","venue":"The Canadian Journal of Hospital Pharmacy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; University of British Columbia; St. Paul's Hospital","funders":"","keywords":"Voriconazole; Therapeutic drug monitoring; CYP2C19; Drug; Medicine; Pharmacology; Pharmacokinetics; Antifungal drug; Therapeutic effect; Internal medicine; Antifungal; Dermatology; Cytochrome P450","score_opus":0.021146186520042104,"score_gpt":0.3007449156461892,"score_spread":0.27959872912614714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117125304","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99187356,0.0056125657,0.0000013408583,0.0015093264,0.00014250072,0.00023050507,0.000010572062,0.0000011349729,0.0006185048],"genre_scores_gemma":[0.9991786,0.0005746425,0.000013216539,0.000054453903,0.00013783081,0.0000015257465,5.7470197e-7,0.0000052185464,0.00003395506],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990657,0.000081196435,0.00041327372,0.000061904575,0.0002127861,0.00016515118],"domain_scores_gemma":[0.99907005,0.00014198331,0.00026730858,0.00017495146,0.00022064248,0.00012507048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003109232,0.000095215895,0.0002900817,0.0001318361,0.00006423238,0.0000069567764,0.00016534916,0.000019654526,0.000031067517],"category_scores_gemma":[0.00005541406,0.000053530446,0.00018899565,0.0002371838,0.00013841176,0.0000873797,0.0000022833785,0.0001777782,8.3414517e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014461564,0.0005485904,0.97012967,0.00001981627,0.000121628844,0.000037568232,0.010100478,0.000040625775,0.010323617,0.00015850374,0.000055664703,0.008319197],"study_design_scores_gemma":[0.0013385792,0.0018411822,0.9369132,0.00010724907,0.00017864113,0.000025413174,0.0039756964,0.0000071797153,0.0543879,0.000860351,0.00031199117,0.000052636202],"about_ca_topic_score_codex":0.006879379,"about_ca_topic_score_gemma":0.0070733353,"teacher_disagreement_score":0.044064283,"about_ca_system_score_codex":0.00017016337,"about_ca_system_score_gemma":0.00086391607,"threshold_uncertainty_score":0.9997339},"labels":[],"label_agreement":null},{"id":"W2117142796","doi":"10.1097/inf.0b013e3182737427","title":"Results From a Prospective, International, Epidemiologic Study of Invasive Candidiasis in Children and Neonates","year":2012,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":177,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Micafungin; Fluconazole; Invasive candidiasis; Caspofungin; Medicine; Candida albicans; Candida parapsilosis; Candida glabrata; Echinocandin; Anidulafungin; Amphotericin B; Antifungal; Internal medicine; Pediatrics; Intensive care medicine; Biology; Microbiology; Dermatology","score_opus":0.01419363674886275,"score_gpt":0.2787691171554024,"score_spread":0.26457548040653966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117142796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99693143,0.0018627222,0.000007189871,0.0002164988,0.00016143132,0.00056111685,0.000056946436,0.000013361941,0.00018930827],"genre_scores_gemma":[0.99698037,0.0020351543,0.00001675497,0.00008841205,0.00083178544,0.00001246035,0.000008279568,0.000008188877,0.000018600223],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986491,0.00024682892,0.00046782027,0.00017143328,0.00024710235,0.00021767449],"domain_scores_gemma":[0.9985076,0.00066238083,0.00028916608,0.00018803698,0.00012889969,0.00022386973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000944618,0.00012483126,0.00028288274,0.00015811772,0.0001137547,0.000019037217,0.00009397265,0.00004266772,0.000044674765],"category_scores_gemma":[0.00359277,0.00007605481,0.00008181916,0.00022161927,0.00006418602,0.00017381331,0.000060818733,0.00035937835,0.000004181648],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010057286,0.0010822548,0.9957331,0.0000071437134,0.00012475342,0.000012479907,0.0014795637,0.000019291276,0.0000102035865,0.0000075648927,0.00019911886,0.0003187913],"study_design_scores_gemma":[0.0031652024,0.00023839602,0.9943273,0.000014464729,0.00034941031,0.00005633244,0.0008268861,0.000010067216,0.000004712671,0.00093194464,0.0000015963394,0.000073689276],"about_ca_topic_score_codex":0.0010576289,"about_ca_topic_score_gemma":0.00021093202,"teacher_disagreement_score":0.002648152,"about_ca_system_score_codex":0.0001197807,"about_ca_system_score_gemma":0.00014446527,"threshold_uncertainty_score":0.4301141},"labels":[],"label_agreement":null},{"id":"W2117467417","doi":"10.4172/1948-5948.1000066","title":"Evaluation of C. albicans Adhesion and Growth on Restorative Dental Materials Enriched or not with Fluoride","year":2012,"lang":"en","type":"article","venue":"Journal of Microbial & Biochemical Technology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Fluoride; Adhesion; Corpus albicans; Candida albicans; Dentistry; Materials science; Microbiology; Chemistry; Biology; Medicine; Composite material; Inorganic chemistry","score_opus":0.03178659112037829,"score_gpt":0.31670813956301025,"score_spread":0.28492154844263196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117467417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99832046,0.0003472423,0.00003660886,0.00094812474,0.000089154484,0.00021401353,0.00000994054,0.000010698163,0.000023751283],"genre_scores_gemma":[0.9982097,0.0000864201,0.0014117338,0.000119849356,0.00014077542,0.000002326759,0.0000038948433,0.000011011656,0.000014252178],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873817,0.00008341243,0.00044007722,0.00013820697,0.00040963772,0.00019050177],"domain_scores_gemma":[0.99870175,0.00006555338,0.00036289258,0.00014666456,0.0006327219,0.000090416586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010439014,0.00012909395,0.0004437054,0.00019196571,0.000028387669,0.000004211022,0.00008703692,0.0002535107,0.000063074214],"category_scores_gemma":[0.0011188271,0.00007969765,0.00005121671,0.00021039974,0.0003281408,0.00007659826,0.000036794623,0.00025621848,0.0000026735338],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0059055174,0.00029579463,0.012228636,0.000046063313,0.0000763511,0.00000971095,0.000076529264,3.6970647e-8,0.9798968,0.00009487542,0.0006919795,0.00067772757],"study_design_scores_gemma":[0.0020121045,0.0016250934,0.02757204,0.00021404441,0.00032191887,0.00035052458,0.00025812618,6.774026e-7,0.96742487,0.00009594277,0.00004582481,0.00007883324],"about_ca_topic_score_codex":0.0000062054833,"about_ca_topic_score_gemma":0.000004604822,"teacher_disagreement_score":0.015343403,"about_ca_system_score_codex":0.0001767235,"about_ca_system_score_gemma":0.00015479498,"threshold_uncertainty_score":0.3249976},"labels":[],"label_agreement":null},{"id":"W2117541395","doi":"10.1046/j.1365-2958.2000.01715.x","title":"Expression cloning of the <i>Candida albicans CSA1</i> gene encoding a mycelial surface antigen by sorting of <i>Saccharomyces cerevisiae</i> transformants with monoclonal antibody‐coated magnetic beads","year":2000,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Medical Research Council; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Saccharomyces cerevisiae; Candida albicans; Monoclonal antibody; Cloning (programming); Antigen; Gene; Molecular biology; Microbiology; Antibody; Genetics","score_opus":0.004720343109565877,"score_gpt":0.22964930575171816,"score_spread":0.22492896264215229,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117541395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944691,0.0030370052,0.0007470825,0.00014166503,0.000036697216,0.00046935078,0.00012256636,0.00002205738,0.0009544665],"genre_scores_gemma":[0.9979612,0.00037737345,0.0010227194,0.00021857616,0.000015300102,0.0000033046626,0.00013022138,0.00002886163,0.00024243226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99821806,0.00016726313,0.0006021374,0.0004195722,0.00016098068,0.0004319854],"domain_scores_gemma":[0.9991438,0.00004503042,0.00022511213,0.00040175038,0.00010730403,0.000077035955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024402281,0.0002568172,0.00061484484,0.000037059,0.00011227696,0.000007499658,0.00024200407,0.00018193378,0.00035084388],"category_scores_gemma":[0.000020397372,0.00017157574,0.00019193506,0.00027132698,0.00038037528,0.000050265684,0.000040049523,0.00025229246,0.0000041174],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000630741,0.00011271762,0.069495656,0.00012188342,0.000058311278,0.000021515589,0.00024944358,0.000052483814,0.9284453,0.0000036436281,0.00009309537,0.0007152086],"study_design_scores_gemma":[0.001371833,0.00042863068,0.0050290227,0.0004388473,0.00010615522,0.00010091383,0.00009728162,0.00004335455,0.9914182,0.0000033450244,0.00078605994,0.00017634722],"about_ca_topic_score_codex":0.0001771167,"about_ca_topic_score_gemma":0.000019974563,"teacher_disagreement_score":0.06446663,"about_ca_system_score_codex":0.000036345227,"about_ca_system_score_gemma":0.00013578877,"threshold_uncertainty_score":0.69966555},"labels":[],"label_agreement":null},{"id":"W2118042760","doi":"10.1093/infdis/jit358","title":"Pharmacokinetics of Posaconazole Within Epithelial Cells and Fungi: Insights Into Potential Mechanisms of Action During Treatment and Prophylaxis","year":2013,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Christie (Canada)","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; Pfizer Canada; Astellas Pharma; McGill University","keywords":"Posaconazole; Aspergillus fumigatus; Endoplasmic reticulum; A549 cell; Microbiology; Intracellular; Chemistry; Biology; Biochemistry; Cell biology; Cell; Voriconazole; Antifungal","score_opus":0.007373895582205722,"score_gpt":0.24577601913415248,"score_spread":0.23840212355194676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118042760","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99730414,0.0018616205,0.0003883698,0.000034408,0.00011853574,0.000262504,0.000007618522,0.000005884156,0.000016927017],"genre_scores_gemma":[0.9973365,0.0024655755,0.00005496175,0.000014997694,0.000084706946,0.0000019522736,6.4523186e-7,0.000008402202,0.00003225149],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99924,0.00007992292,0.00034102847,0.00007416803,0.0001828945,0.00008201308],"domain_scores_gemma":[0.999162,0.000053112493,0.00033453177,0.000100820034,0.00023508845,0.000114434784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008979853,0.00010635303,0.0002770074,0.00008578858,0.00007090506,0.000008968605,0.00003418988,0.000036330614,0.000039402286],"category_scores_gemma":[0.000032530028,0.000060224203,0.00008287856,0.000067102366,0.0001353746,0.000097368,0.000020649033,0.00008959626,9.060232e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008525017,0.00032580775,0.016666435,0.00025151047,0.00021547655,0.0000074039517,0.0006777122,0.000079061996,0.977569,0.00001839578,0.0000064524356,0.0033302417],"study_design_scores_gemma":[0.0022222826,0.0025938528,0.20970716,0.000090643385,0.00065839523,0.00007490568,0.0005501587,0.00012849375,0.78140944,0.0024983096,0.0000026661583,0.00006371127],"about_ca_topic_score_codex":0.000107912616,"about_ca_topic_score_gemma":0.000013737656,"teacher_disagreement_score":0.19615957,"about_ca_system_score_codex":0.00004709575,"about_ca_system_score_gemma":0.00007170457,"threshold_uncertainty_score":0.24558719},"labels":[],"label_agreement":null},{"id":"W2118572849","doi":"10.1128/jb.183.3.865-872.2001","title":"Infrequent Genetic Exchange and Recombination in the Mitochondrial Genome of <i>Candida albicans</i>","year":2001,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Pfizer Canada","keywords":"Biology; Mitochondrial DNA; Genetics; Haplotype; Candida albicans; Genome; Ploidy; Indel; Phylogenetic tree; Nuclear DNA; Genotype; Recombination; Gene; Single-nucleotide polymorphism","score_opus":0.015965969482304804,"score_gpt":0.26699477711987984,"score_spread":0.25102880763757507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118572849","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971756,0.00089380844,0.00009298944,0.0012112444,0.00016823834,0.00012557062,0.0000017054953,0.0000010541794,0.00032979308],"genre_scores_gemma":[0.9972874,0.0017106914,0.000413895,0.00034208727,0.00017789984,0.0000017523305,0.0000020603497,0.0000037587947,0.000060455415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99919635,0.00010154076,0.00041280637,0.00007571225,0.0001063662,0.00010724494],"domain_scores_gemma":[0.9994346,0.00008888528,0.00023124763,0.00010996656,0.000094942,0.00004035457],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034409534,0.000060728424,0.00028380557,0.00009494211,0.000015849439,0.0000043779346,0.000072091694,0.000068597175,0.000121853256],"category_scores_gemma":[0.000120438075,0.000037855854,0.000057890313,0.00009082033,0.00009840506,0.000045584264,0.0000116104575,0.00017015326,8.8207037e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019107211,0.00035384047,0.56054425,0.00009926507,0.000054178512,0.00025327646,0.0015855887,0.0000022440147,0.4209823,0.00005826777,0.0001793189,0.013976741],"study_design_scores_gemma":[0.0013697527,0.0012524837,0.9906026,0.000039052735,0.0000323462,0.0006151784,0.00018244641,0.0000033109939,0.00011139894,0.00044031988,0.005317733,0.000033392214],"about_ca_topic_score_codex":0.000033828874,"about_ca_topic_score_gemma":0.00009924157,"teacher_disagreement_score":0.43005833,"about_ca_system_score_codex":0.000040907165,"about_ca_system_score_gemma":0.00006654736,"threshold_uncertainty_score":0.1543717},"labels":[],"label_agreement":null},{"id":"W2118769292","doi":"","title":"The role of siderophores in iron uptake and virulence of the opportunistic fungal pathogen : Aspergillus fumigatus","year":2004,"lang":"en","type":"dissertation","venue":"Summit (Simon Fraser University)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Simon Fraser University; Natural Sciences and Engineering Research Council of Canada; Wellcome Trust","keywords":"Aspergillus fumigatus; Siderophore; Transferrin; Microbiology; Aspergillosis; Pathogen; Virulence; Biology; Transferrin receptor; Biochemistry; Immunology","score_opus":0.008896324020117736,"score_gpt":0.21747224310537475,"score_spread":0.20857591908525702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118769292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883716,0.0024471374,0.0000015108081,0.000046803674,0.00012347657,0.0003992294,0.000118328375,0.000009847849,0.00848206],"genre_scores_gemma":[0.99318737,0.0019159227,0.000015426549,0.000014139966,0.0000182443,7.88052e-7,0.0000875632,0.000017863484,0.004742704],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99861884,0.000089752924,0.0003351275,0.00034230965,0.00037740602,0.00023656884],"domain_scores_gemma":[0.9988145,0.00011850407,0.00028756692,0.00050923915,0.00017211364,0.00009805833],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017832841,0.00022294906,0.0004280075,0.00015295473,0.00014963426,0.000008442666,0.00030111877,0.00026648687,0.00003403377],"category_scores_gemma":[0.00017027596,0.00015841135,0.00017738926,0.00041585922,0.0003298822,0.00006301229,0.00006245386,0.0004082893,0.0000017843058],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019701305,0.00018085267,0.98010385,0.000603309,0.00008227384,0.00016263856,0.00022887628,0.000011913548,0.004614807,0.0033615853,0.00008756426,0.008592206],"study_design_scores_gemma":[0.0016611126,0.00033371148,0.8591141,0.0013528939,0.00054525374,5.3963316e-8,0.111990385,0.000040206647,0.01288055,0.0011810309,0.010562712,0.0003379926],"about_ca_topic_score_codex":0.00057138473,"about_ca_topic_score_gemma":0.12261505,"teacher_disagreement_score":0.12204366,"about_ca_system_score_codex":0.00015299095,"about_ca_system_score_gemma":0.00059699,"threshold_uncertainty_score":0.89339495},"labels":[],"label_agreement":null},{"id":"W2118973232","doi":"","title":"Candida parapsilosis : an emerging fungal pathogen.","year":2012,"lang":"en","type":"letter","venue":"PubMed","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Fluconazole; Candida krusei; Candida parapsilosis; Amphotericin B; Fungemia; Candida glabrata; Candida tropicalis; Microbiology; Medicine; Biology; Candida albicans; Internal medicine; Antifungal","score_opus":0.05475487265505494,"score_gpt":0.27622775677717587,"score_spread":0.22147288412212093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118973232","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25068605,0.008971765,0.00010232292,0.69227076,0.003953867,0.005520042,0.00072503724,0.0006978443,0.03707232],"genre_scores_gemma":[0.5712161,0.00016517441,0.000112590475,0.39688134,0.01161713,0.0015410662,0.0010390175,0.00013562838,0.017291931],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.996705,0.00015092574,0.00045272466,0.000680646,0.0007148456,0.0012958526],"domain_scores_gemma":[0.9981722,0.00007406827,0.000176394,0.0010266824,0.0001249407,0.0004257059],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006119183,0.00043683435,0.00075814384,0.00017602374,0.00013101991,0.00004428122,0.00022362809,0.00084423943,0.00040798774],"category_scores_gemma":[0.00015271605,0.00037112084,0.00033864132,0.00020529273,0.0001196909,0.00018313312,0.000055623725,0.0017314659,0.00009575319],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013113994,0.00010632873,0.17503892,0.00046164612,0.00016396849,0.00064689526,0.00011270454,6.142865e-8,0.000052283092,0.0000066881285,0.7650925,0.05818689],"study_design_scores_gemma":[0.00031259577,0.000029805504,0.42329141,0.000030162077,0.0003348692,0.000036450303,0.000029097337,0.0000016135527,0.000059294645,0.000026548885,0.57554924,0.00029892017],"about_ca_topic_score_codex":0.0001307608,"about_ca_topic_score_gemma":0.000071836126,"teacher_disagreement_score":0.32053006,"about_ca_system_score_codex":0.00024529366,"about_ca_system_score_gemma":0.00011650123,"threshold_uncertainty_score":0.99987406},"labels":[],"label_agreement":null},{"id":"W2119409346","doi":"10.1242/jcs.00329","title":"<i>Aspergillus fumigatus</i> conidia survive and germinate in acidic organelles of A549 epithelial cells","year":2003,"lang":"en","type":"article","venue":"Journal of Cell Science","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":166,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Aspergillus fumigatus; Phagosome; Biology; A549 cell; Conidium; Microbiology; Endosome; Cell biology; Phagocytosis; Hypha; In vitro; Intracellular; Botany; Biochemistry","score_opus":0.008443130483059988,"score_gpt":0.2501759912521882,"score_spread":0.2417328607691282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119409346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949614,0.0009437821,0.000055078483,0.000109024804,0.00019829643,0.00008744562,0.00000321447,0.0000019230356,0.00363984],"genre_scores_gemma":[0.99796003,0.00086702633,0.0007388753,0.000072907205,0.000024213276,1.7560879e-7,8.603939e-8,0.000005257036,0.00033140302],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985255,0.000067463465,0.00046043,0.00017434859,0.0005229734,0.0002492689],"domain_scores_gemma":[0.99890536,0.00012500903,0.00028134137,0.00015535466,0.00032820113,0.00020471639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018875266,0.00009847162,0.0003591397,0.00016604432,0.000057670368,0.000015487638,0.00014984698,0.00005271524,0.00007553449],"category_scores_gemma":[0.00035504365,0.00007155963,0.00006445822,0.0005137397,0.0010597323,0.00019828015,0.000025170271,0.00023070251,0.0000045134225],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000104321836,0.00011767893,0.037753187,0.000054963242,0.0000034004602,0.0000999995,0.00052026514,0.000005044164,0.9607051,0.00013923406,0.0000444348,0.000452385],"study_design_scores_gemma":[0.00093837234,0.0003410389,0.06258154,0.00008715383,0.00002636606,0.00007704072,0.00092240254,0.000020166803,0.9341445,0.00028800935,0.0005027772,0.00007061598],"about_ca_topic_score_codex":0.0000212256,"about_ca_topic_score_gemma":0.000030083123,"teacher_disagreement_score":0.026560571,"about_ca_system_score_codex":0.000057422454,"about_ca_system_score_gemma":0.0006725716,"threshold_uncertainty_score":0.39046276},"labels":[],"label_agreement":null},{"id":"W2119749825","doi":"10.1091/mbc.e04-02-0144","title":"Transcription Profiling of Cyclic AMP Signaling in<i>Candida albicans</i>","year":2004,"lang":"en","type":"article","venue":"Molecular Biology of the Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"National Research Council Canada; Canadian Institutes of Health Research; Genomic Health","keywords":"Biology; Adenylyl cyclase; cAMP-dependent pathway; ADCY9; Candida albicans; Gene; Cell biology; Transcription factor; Effector; Regulation of gene expression; Genetics; Signal transduction","score_opus":0.011621795436363462,"score_gpt":0.26737680065365516,"score_spread":0.2557550052172917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119749825","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926737,0.000755988,0.0051544546,0.00028822667,0.00005411929,0.0002488283,0.0000052229216,0.000006246827,0.00081324077],"genre_scores_gemma":[0.9980627,0.000025618883,0.0016422094,0.00018162065,0.000008796354,0.000003638362,0.000009688902,0.000007236841,0.000058496706],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928033,0.00006732756,0.0002638768,0.0001611451,0.00008410703,0.00014320658],"domain_scores_gemma":[0.99956703,0.000016562379,0.00008909699,0.00025949097,0.000041320996,0.000026492971],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020829403,0.00008012384,0.00023978217,0.000044588898,0.000018361976,8.3111223e-7,0.000103974126,0.000102327824,0.000015087304],"category_scores_gemma":[0.000046065543,0.00005601245,0.00014904923,0.0001471074,0.00020167218,0.000010527834,0.000016034619,0.00013736903,0.0000018015284],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012110106,0.00011010415,0.050174236,0.00011247264,0.000012486419,0.0000027970095,0.0001232088,0.00017130893,0.9488191,0.00025441748,0.0000010985881,0.00009766196],"study_design_scores_gemma":[0.0008711591,0.00011482271,0.009438132,0.00009208991,0.00003718757,0.0000019449685,0.00006759806,0.000004384031,0.9872689,0.0020094735,0.000046673133,0.00004759194],"about_ca_topic_score_codex":0.0001209161,"about_ca_topic_score_gemma":0.000053132313,"teacher_disagreement_score":0.040736105,"about_ca_system_score_codex":0.00003310393,"about_ca_system_score_gemma":0.00007824591,"threshold_uncertainty_score":0.22841214},"labels":[],"label_agreement":null},{"id":"W2120044408","doi":"10.1183/09031936.00226911","title":"Global burden of chronic pulmonary aspergillosis complicating sarcoidosis","year":2012,"lang":"en","type":"article","venue":"European Respiratory Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":181,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Sarcoidosis; Pulmonary aspergillosis; Aspergillosis; Intensive care medicine; Dermatology; Immunology","score_opus":0.03852849565183989,"score_gpt":0.3052202729892359,"score_spread":0.26669177733739596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120044408","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9085126,0.008900072,0.00031100374,0.00014393707,0.00018111603,0.00012026947,0.000011274989,0.00003493785,0.08178477],"genre_scores_gemma":[0.99710387,0.000094728355,0.0003923683,0.0003446472,0.0018410549,8.3995945e-7,0.0000021153376,0.00002991674,0.00019046623],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99793744,0.0003823087,0.00060225837,0.00019290099,0.00044345573,0.00044161652],"domain_scores_gemma":[0.99862725,0.000040684758,0.00029472425,0.00041840313,0.00019151809,0.0004274241],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014304469,0.00017215988,0.00032827063,0.00006866214,0.00019616785,0.000021009117,0.0002143012,0.000045670455,0.00034889986],"category_scores_gemma":[0.00019742947,0.00014105867,0.00024585344,0.00024334202,0.00016368055,0.00018702433,0.00009049397,0.00034430972,0.00016988046],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016721536,0.0002781904,0.88434064,0.00011930828,0.000094919495,0.00014312142,0.00015061727,0.000014285361,0.06234915,0.0001954721,0.0018867686,0.050260294],"study_design_scores_gemma":[0.00057592615,0.00031177554,0.9603504,0.00025055362,0.00009204384,0.0004539391,0.00024463743,0.000033303528,0.0010020618,0.000013795408,0.036520872,0.00015066832],"about_ca_topic_score_codex":0.0000064963583,"about_ca_topic_score_gemma":0.0000013284273,"teacher_disagreement_score":0.08859125,"about_ca_system_score_codex":0.00029870783,"about_ca_system_score_gemma":0.00014963494,"threshold_uncertainty_score":0.5752205},"labels":[],"label_agreement":null},{"id":"W2120078931","doi":"10.1128/jcm.39.4.1657-1660.2001","title":"Multilocus Genotyping Indicates that the Ability To Invade the Bloodstream Is Widespread among <i>Candida albicans</i> Isolates","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Genotyping; Biology; Genotype; Candida albicans; Microbiology; Fungemia; Corpus albicans; Dendrogram; Bloodstream infection; Allele; Genetics; Genetic diversity; Antifungal; Population; Gene; Medicine","score_opus":0.05520567457974739,"score_gpt":0.36863637292118073,"score_spread":0.31343069834143333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120078931","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97272676,0.0009772076,0.00014639067,0.024934862,0.0004941321,0.00042400422,0.000015539528,0.000013640857,0.00026745105],"genre_scores_gemma":[0.9852128,0.00083466846,0.00031001086,0.012802778,0.0005274389,0.000004168238,0.0000030718004,0.000017186609,0.00028786904],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968683,0.0005935136,0.0016050602,0.00036174484,0.00012401925,0.00044736208],"domain_scores_gemma":[0.99420106,0.0037340736,0.00085601275,0.0006141378,0.00030535168,0.00028937214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036081595,0.0002301895,0.00093445927,0.000064614636,0.000203368,0.000032471966,0.00058982585,0.00043007705,0.0003776816],"category_scores_gemma":[0.0035483355,0.00010663095,0.000624084,0.0002422686,0.0011334888,0.00008871589,0.00014394948,0.0016949169,0.000054070257],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001635964,0.00033444088,0.9270058,0.000018507006,0.00022785825,0.000030072366,0.00044984536,0.0000033700803,0.053915344,0.0000061988344,0.006687621,0.009684958],"study_design_scores_gemma":[0.0016518554,0.0011578999,0.9356064,0.00018180284,0.00032459173,0.00043373846,0.00057296915,0.000012509347,0.006455966,0.00031583416,0.053124577,0.00016181907],"about_ca_topic_score_codex":0.00013005546,"about_ca_topic_score_gemma":0.0003426995,"teacher_disagreement_score":0.04745938,"about_ca_system_score_codex":0.000054977765,"about_ca_system_score_gemma":0.0002663938,"threshold_uncertainty_score":0.73636645},"labels":[],"label_agreement":null},{"id":"W2120218258","doi":"10.1128/jcm.40.8.2729-2740.2002","title":"Ca3 Fingerprinting of <i>Candida albicans</i> Bloodstream Isolates from the United States, Canada, South America, and Europe Reveals a European Clade","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Pfizer","keywords":"Clade; Biology; Corpus albicans; Molecular epidemiology; Phylogenetic tree; DNA profiling; Candida albicans; Cluster (spacecraft); Geography; Microbiology; Genotype; Genetics; Gene","score_opus":0.032804583841939995,"score_gpt":0.28840630601989176,"score_spread":0.25560172217795174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120218258","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99418813,0.0016013883,0.000050601237,0.0034104208,0.0001672222,0.0000916897,0.00012260342,0.0000052194373,0.00036274546],"genre_scores_gemma":[0.99173176,0.0017658098,0.00049986923,0.0053234776,0.0002784731,1.7395075e-7,0.000022112343,0.00001707835,0.00036122304],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972237,0.00064304896,0.0015814253,0.00022490566,0.00007728727,0.00024966832],"domain_scores_gemma":[0.9960018,0.0020404262,0.0011586692,0.00028112993,0.00033543285,0.00018253765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007727388,0.00015364596,0.000840589,0.00004275606,0.00006441429,0.000009945771,0.00021658059,0.000087513414,0.00023081584],"category_scores_gemma":[0.0025642817,0.00009159578,0.0001705664,0.00019892586,0.00050007063,0.00002537158,0.000082191924,0.00076805823,0.0000069157063],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007578424,0.00028727102,0.89074945,0.000042373213,0.0005017975,0.00018174447,0.0006613329,0.000012532129,0.06610805,0.000004838219,0.03363744,0.007055298],"study_design_scores_gemma":[0.0031187302,0.001500679,0.7922594,0.0004955892,0.00051163975,0.00024168563,0.0009784551,0.00011324882,0.00047209123,0.000033733108,0.20005439,0.00022035821],"about_ca_topic_score_codex":0.018670117,"about_ca_topic_score_gemma":0.008639678,"teacher_disagreement_score":0.16641694,"about_ca_system_score_codex":0.00002083289,"about_ca_system_score_gemma":0.00017760857,"threshold_uncertainty_score":0.9878646},"labels":[],"label_agreement":null},{"id":"W2120450091","doi":"10.1128/iai.70.11.6319-6329.2002","title":"<i>Candida albicans</i>Killing by RAW 264.7 Mouse Macrophage Cells: Effects of<i>Candida</i>Genotype, Infection Ratios, and Gamma Interferon Treatment","year":2002,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"","keywords":"Candida albicans; Biology; Macrophage; Microbiology; Virulence; Corpus albicans; Cell culture; Mutant; Molecular biology; In vitro; Gene; Biochemistry","score_opus":0.010061774354565785,"score_gpt":0.236154221930107,"score_spread":0.2260924475755412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120450091","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950998,0.002028212,0.0010074844,0.000045773217,0.0002158485,0.0004970742,0.000010746815,0.00007376022,0.0010213054],"genre_scores_gemma":[0.98616713,0.01165743,0.000032721913,0.00011312372,0.000049930706,0.000023153947,0.000026367738,0.000020489262,0.0019096582],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893576,0.00014123933,0.00031504958,0.00026860865,0.00012295974,0.0002163627],"domain_scores_gemma":[0.9992103,0.00013754217,0.00012480452,0.0002914923,0.000089012414,0.00014687135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017293218,0.00023282657,0.0003914457,0.00010727647,0.00025425846,0.000037858295,0.000025859486,0.00014697477,0.00017071885],"category_scores_gemma":[0.00007522465,0.0001976343,0.000096316646,0.00018188677,0.00017937706,0.00017093321,0.00003040835,0.00025218254,0.000012624457],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005664117,0.001005151,0.2354187,0.00061655283,0.00018941941,0.0000075021653,0.0010208827,0.0000054165826,0.71033347,0.000019945815,0.00097622233,0.049840305],"study_design_scores_gemma":[0.0048855585,0.0046189018,0.1733279,0.00024796752,0.00033968082,0.000042509437,0.00010251528,0.0007653162,0.80182713,0.000029400442,0.013436386,0.00037671902],"about_ca_topic_score_codex":0.00461434,"about_ca_topic_score_gemma":0.00057344814,"teacher_disagreement_score":0.091493666,"about_ca_system_score_codex":0.00014090499,"about_ca_system_score_gemma":0.000021038062,"threshold_uncertainty_score":0.8059293},"labels":[],"label_agreement":null},{"id":"W2120631285","doi":"10.1111/j.1439-0507.2010.01861.x","title":"Retrospective evaluation of caspofungin therapy in invasive aspergillosis (RECAM-IA)","year":2010,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"European Organisation for Research and Treatment of Cancer","keywords":"Caspofungin; Aspergillosis; Medicine; Internal medicine; Refractory (planetary science); Retrospective cohort study; Adverse effect; Antifungal; Mycosis; Surgery; Amphotericin B; Biology; Immunology; Dermatology","score_opus":0.03779844917013221,"score_gpt":0.34204638407359456,"score_spread":0.30424793490346236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120631285","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910487,0.00048472628,0.000003120836,0.00019098229,0.00013868435,0.00048139205,0.000012170366,0.000017182942,0.007623046],"genre_scores_gemma":[0.9991621,0.00027381332,0.00018068899,0.00009967691,0.0000668495,0.000025411773,0.000012454398,0.0000114507675,0.00016756488],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988091,0.00007350676,0.00022756043,0.00023500726,0.00050220726,0.00015264667],"domain_scores_gemma":[0.99900526,0.00009422944,0.00007595467,0.0003252356,0.00044920904,0.00005009974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008605182,0.00010166649,0.000276068,0.0001077087,0.000027251235,0.000005070016,0.00006371772,0.00010119237,0.0008977871],"category_scores_gemma":[0.0012937682,0.0000833381,0.00008272694,0.00026124177,0.00008785005,0.00007892137,0.00001359539,0.00023066837,0.000019564097],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019360996,0.00017174632,0.73518354,0.000018097971,0.000022622202,0.0000049506293,0.00043946292,0.0000016700218,0.25599828,0.00022898542,0.00013771789,0.0075993305],"study_design_scores_gemma":[0.0011171032,0.00022902625,0.87701,0.000050278475,0.000034186836,0.0000027725025,0.00028203326,0.000072228286,0.12022251,0.0008352785,0.00007538093,0.0000691939],"about_ca_topic_score_codex":0.00028182773,"about_ca_topic_score_gemma":0.0032210122,"teacher_disagreement_score":0.14182648,"about_ca_system_score_codex":0.0001147315,"about_ca_system_score_gemma":0.00025307733,"threshold_uncertainty_score":0.9830139},"labels":[],"label_agreement":null},{"id":"W2121090306","doi":"10.1111/j.1567-1364.2006.00074.x","title":"The<i>Candida</i>Genome Database: Facilitating research on<i>Candida albicans</i>molecular biology","year":2006,"lang":"en","type":"review","venue":"FEMS Yeast Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research; National Research Council Canada; National Institutes of Health","keywords":"Biology; Candida albicans; Genome; Upload; Computational biology; Function (biology); Gene; Perspective (graphical); Genetics; Database; World Wide Web; Computer science","score_opus":0.1974563513488876,"score_gpt":0.5027634667419251,"score_spread":0.30530711539303745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121090306","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00030060776,0.9608635,0.00011981074,0.00035630516,0.00019517931,0.0032980617,0.0011488845,0.000077666686,0.033639997],"genre_scores_gemma":[0.0021432317,0.9671726,0.00013614482,0.00005510027,0.00083472824,0.00077318127,0.0018036335,0.00016841016,0.026912943],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9858038,0.0046472074,0.0013214754,0.0019499762,0.0033192246,0.0029583354],"domain_scores_gemma":[0.98907334,0.005393877,0.00020767,0.0032511654,0.0014014859,0.0006724798],"candidate_categories":["metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":["sts"],"category_scores_codex":[0.015187492,0.0007227906,0.0021907429,0.0011223162,0.0017164736,0.00027706323,0.0015535696,0.0007470175,0.00040016492],"category_scores_gemma":[0.0039661643,0.00046692518,0.0007898421,0.0030086923,0.002753999,0.00007745518,0.0008511888,0.0065972013,0.0021937166],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005672448,0.0005568891,0.00020037225,0.018642105,0.0005293999,0.0009491312,0.00013012535,7.323984e-7,0.0009747224,0.008152677,0.028882125,0.9404145],"study_design_scores_gemma":[0.00045087095,0.0006312697,0.00009108244,0.005799292,0.00010268231,0.000044478926,0.00036738758,0.000004921745,0.000015925916,0.00046578242,0.9916453,0.00038103602],"about_ca_topic_score_codex":0.001448391,"about_ca_topic_score_gemma":0.00052309956,"teacher_disagreement_score":0.96276313,"about_ca_system_score_codex":0.0011802154,"about_ca_system_score_gemma":0.00354146,"threshold_uncertainty_score":0.99995995},"labels":[],"label_agreement":null},{"id":"W2121319524","doi":"10.1186/1471-2334-14-327","title":"Invasive candidiasis in low birth weight preterm infants: risk factors, clinical course and outcome in a prospective multicenter study of cases and their matched controls","year":2014,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Children's & Women's Health Centre of British Columbia; Children's Hospital of Eastern Ontario; Jewish General Hospital; Sunnybrook Health Science Centre; Stollery Children's Hospital; Izaak Walton Killam Health Centre; Foothills Medical Centre; Health Sciences Centre; Mount Sinai Hospital; Hamilton Health Sciences; Centre Hospitalier Universitaire Sainte-Justine; Dalhousie University; Montreal Children's Hospital; Royal University Hospital; University of Toronto; SickKids Foundation; Université de Montréal; Hospital for Sick Children","funders":"Pfizer Canada; Hospital for Sick Children; Pfizer","keywords":"Medicine; Low birth weight; Medical microbiology; Prospective cohort study; Birth weight; Pediatrics; Multicenter study; Tropical medicine; Internal medicine; Pregnancy; Immunology; Pathology; Biology; Randomized controlled trial","score_opus":0.01870191957374832,"score_gpt":0.3142329013035058,"score_spread":0.29553098172975745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121319524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972629,0.00043343517,0.000015182296,0.000006877515,0.00006667923,0.0019964636,0.00015515776,0.00003379598,0.0000294895],"genre_scores_gemma":[0.999545,0.00022614065,0.0000066743874,0.000051728668,0.000043126533,0.00009080938,0.000007714763,0.000018814122,0.000009986706],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979771,0.0004745217,0.000679126,0.00046857263,0.0001562323,0.00024447893],"domain_scores_gemma":[0.9966491,0.0024738978,0.00024907637,0.00031915164,0.00010906474,0.00019973467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037695732,0.0002479662,0.00091318035,0.00013729245,0.000056333643,0.000025530877,0.000048006827,0.00009850612,0.000017398143],"category_scores_gemma":[0.004618836,0.00017198261,0.00010779,0.00014905036,0.00025302684,0.0001484865,0.00005856724,0.00023148936,8.967731e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021321648,0.003447056,0.99156266,0.00034030585,0.000118850796,0.00003274875,0.0020166086,0.000003913066,0.000017011487,0.00000448608,0.0000030961842,0.0003210927],"study_design_scores_gemma":[0.013030046,0.0015726126,0.98121744,0.00021679312,0.00020918585,0.0000041487287,0.003284305,0.00018300678,0.000047805173,0.00006841861,0.0000014923625,0.00016473809],"about_ca_topic_score_codex":0.0022790686,"about_ca_topic_score_gemma":0.037504204,"teacher_disagreement_score":0.035225134,"about_ca_system_score_codex":0.0000720121,"about_ca_system_score_gemma":0.0001308511,"threshold_uncertainty_score":0.98005885},"labels":[],"label_agreement":null},{"id":"W2121615443","doi":"10.1053/jinf.2001.0929","title":"Candida parapsilosis: Two Cases of Endocarditis in Association with the Toronto Stentless Porcine Valve","year":2002,"lang":"en","type":"article","venue":"Journal of Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Candida parapsilosis; Endocarditis; Medicine; Heart valve; Antifungal; Internal medicine; Cardiology; Surgery; Dermatology","score_opus":0.01637928295632213,"score_gpt":0.2748648154000709,"score_spread":0.2584855324437488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121615443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99673337,0.0011213889,0.00010493313,0.0003146587,0.0001312338,0.000111209854,0.000002406297,0.0000035665237,0.0014772324],"genre_scores_gemma":[0.9987247,0.000870655,0.000022717619,0.00006665552,0.0001729943,0.0000021249664,8.444655e-7,0.000005110589,0.00013417154],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991261,0.0000825409,0.0003035361,0.000060445072,0.00032928676,0.00009809755],"domain_scores_gemma":[0.9990314,0.0001234598,0.00042722878,0.000089845424,0.00029056286,0.000037468435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000470209,0.00006495863,0.0002521282,0.000046620386,0.000032556738,0.0000075708153,0.000021871683,0.00003862446,0.00012732742],"category_scores_gemma":[0.00020003758,0.000037710844,0.00014368784,0.000121241144,0.000021040505,0.00017572676,0.0000039815254,0.00016169652,0.000001284699],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017325082,0.00014896419,0.9947042,0.000030796265,0.0001306769,0.000040073297,0.000282737,0.00005422845,0.0011336232,0.000011035369,0.0014195143,0.0018708879],"study_design_scores_gemma":[0.0014978037,0.00086861465,0.99420285,0.00019973032,0.00018126909,0.00023024416,0.00036102897,0.000037463113,0.0019642198,0.0000100932075,0.0004075007,0.000039173723],"about_ca_topic_score_codex":0.0021984708,"about_ca_topic_score_gemma":0.007962307,"teacher_disagreement_score":0.0057638367,"about_ca_system_score_codex":0.00052008504,"about_ca_system_score_gemma":0.000036844758,"threshold_uncertainty_score":0.44431543},"labels":[],"label_agreement":null},{"id":"W2121982380","doi":"10.1128/aac.47.4.1200-1206.2003","title":"Sublethal Injury and Resuscitation of <i>Candida albicans</i> after Amphotericin B Treatment","year":2003,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Alberta Hospital; University of Alberta","funders":"","keywords":"Amphotericin B; Miconazole; Fluconazole; Candida albicans; Flucytosine; Corpus albicans; Microbiology; Pharmacology; Biology; Chemistry; Antifungal","score_opus":0.010221570097131408,"score_gpt":0.26527515007099534,"score_spread":0.2550535799738639,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121982380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99821395,0.00010326393,0.000041387913,0.0006956385,0.000044517925,0.00023000689,0.000021637197,0.000009778396,0.0006398516],"genre_scores_gemma":[0.9934079,0.0022604803,0.00056752405,0.002941583,0.000024356304,0.0000045641664,0.000009453464,0.000013900118,0.00077022414],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999316,0.000021646818,0.00019181022,0.0002329416,0.000085182626,0.00015242447],"domain_scores_gemma":[0.9996687,0.000015786067,0.000055911107,0.00014497389,0.00004103481,0.00007359912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008492629,0.00013479452,0.0002615357,0.000039427636,0.000043654705,0.0000136730405,0.00001866794,0.00006666381,0.00017541184],"category_scores_gemma":[0.00000814083,0.00010271312,0.000056929046,0.000079869955,0.0001376875,0.000049217393,0.000005277046,0.00004377453,0.0000016113083],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00255156,0.0004717816,0.7883796,0.0001689945,0.00013238945,0.000019351766,0.0011799213,1.1268293e-7,0.18955448,0.000101950616,0.0030061135,0.014433714],"study_design_scores_gemma":[0.003879862,0.0007967936,0.86202604,0.000121175195,0.000080514386,0.000020443373,0.00013844774,0.000005973652,0.09710556,0.00008268056,0.03555362,0.00018889416],"about_ca_topic_score_codex":0.00011941736,"about_ca_topic_score_gemma":0.00003312074,"teacher_disagreement_score":0.09244892,"about_ca_system_score_codex":0.000027543376,"about_ca_system_score_gemma":0.000041110667,"threshold_uncertainty_score":0.41885194},"labels":[],"label_agreement":null},{"id":"W2122188866","doi":"10.1086/345672","title":"Geographical Differences in Human Oral Yeast Flora","year":2003,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Flora (microbiology); Yeast; Candida albicans; China; Microbiology; Oral microbiology; Biology; Commensalism; Medicine; Zoology; Ecology; Bacteria; Geography; Genetics","score_opus":0.057754434173644224,"score_gpt":0.3828587857873043,"score_spread":0.3251043516136601,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122188866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943332,0.00039439983,0.000052078034,0.00008559617,0.00024344423,0.00024567934,0.000012216711,0.00011184527,0.0045215315],"genre_scores_gemma":[0.9988662,0.00015323373,0.0000123980735,0.0005349794,0.0001317469,0.00002004109,0.000015284948,0.000013663087,0.0002524444],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981925,0.0002859633,0.00057181536,0.0004301217,0.0002175231,0.00030210483],"domain_scores_gemma":[0.9988726,0.00025284436,0.00006852389,0.00035438561,0.00007781854,0.00037384577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038428517,0.00016070584,0.0005591623,0.00009635422,0.00009752696,0.000027164851,0.00006892281,0.00016287006,0.00059567956],"category_scores_gemma":[0.0019167699,0.00012731961,0.00034824174,0.00031597973,0.00048301564,0.00006704878,0.000024837325,0.00037893374,0.00006279808],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006006177,0.0018493386,0.99431634,0.000041580137,0.000036440542,0.00005223614,0.0000071120066,2.9010428e-7,0.000032203832,0.0019601327,0.00040575542,0.0012384837],"study_design_scores_gemma":[0.0015385272,0.000521868,0.99308574,0.00006616653,0.0000921101,0.000002943756,0.00004295771,0.000011504738,0.0000119044,0.0037645295,0.00072030345,0.00014141602],"about_ca_topic_score_codex":0.00004194652,"about_ca_topic_score_gemma":0.00033225253,"teacher_disagreement_score":0.0045329994,"about_ca_system_score_codex":0.00003335876,"about_ca_system_score_gemma":0.0001238824,"threshold_uncertainty_score":0.6522274},"labels":[],"label_agreement":null},{"id":"W2122550330","doi":"10.1128/aac.01510-06","title":"Reduced Susceptibility to Polyenes Associated with a Missense Mutation in the <i>ERG6</i> Gene in a Clinical Isolate of <i>Candida glabrata</i> with Pseudohyphal Growth","year":2006,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministère des Transports","funders":"","keywords":"Ergosterol; Complementation; Biology; Missense mutation; Gene; Mutation; Biochemistry; Candida glabrata; Sterol; Yeast; Microbiology; Molecular biology; Phenotype; Candida albicans","score_opus":0.011857318832463042,"score_gpt":0.27423736204405014,"score_spread":0.2623800432115871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122550330","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99635327,0.000025095515,0.00004751828,0.002584795,0.000023087125,0.00078744604,0.00002188473,0.000015306996,0.00014157253],"genre_scores_gemma":[0.99446714,0.0001107003,0.00041049102,0.0047757784,0.000051912804,0.000008220397,0.000038371458,0.000022672484,0.00011473814],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982693,0.00013251867,0.00061805046,0.00044430586,0.00023580882,0.00030001884],"domain_scores_gemma":[0.9992457,0.000110896726,0.00017745802,0.0002692002,0.00013052521,0.000066214976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007383981,0.00021849781,0.0005963204,0.00008329261,0.000054672546,0.000026549895,0.000098737815,0.00012033806,0.00001542816],"category_scores_gemma":[0.00005150131,0.00013138783,0.00008673195,0.00051587645,0.00020541198,0.000077562894,0.0000128468755,0.0002025106,0.0000010474571],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007125624,0.0013934093,0.91312844,0.00006247502,0.000064291795,0.00015838881,0.0007631616,0.000006390761,0.07566837,0.00001924951,0.0011070478,0.00050313474],"study_design_scores_gemma":[0.0066761817,0.00080324203,0.97776425,0.00024711114,0.000046717803,0.0000450093,0.00017741523,0.000032301887,0.013966213,0.000031774325,0.000042799533,0.00016697634],"about_ca_topic_score_codex":0.0017880136,"about_ca_topic_score_gemma":0.0060917987,"teacher_disagreement_score":0.064635806,"about_ca_system_score_codex":0.00004504872,"about_ca_system_score_gemma":0.00012453466,"threshold_uncertainty_score":0.53578407},"labels":[],"label_agreement":null},{"id":"W2122570253","doi":"10.1128/aac.44.7.1887-1893.2000","title":"Itraconazole Oral Solution for Primary Prophylaxis of Fungal Infections in Patients with Hematological Malignancy and Profound Neutropenia: a Randomized, Double-Blind, Double-Placebo, Multicenter Trial Comparing Itraconazole and Amphotericin B","year":2000,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":157,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Itraconazole; Neutropenia; Amphotericin B; Medicine; Aspergillosis; Placebo; Internal medicine; Mycosis; Population; Gastroenterology; Chemotherapy; Surgery; Immunology; Dermatology; Pathology; Antifungal","score_opus":0.0226234012405232,"score_gpt":0.2774331805484901,"score_spread":0.2548097793079669,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122570253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945004,0.00007446479,0.0001222469,0.0002464618,0.000047235128,0.004840438,0.000015885054,0.000018645484,0.00013424296],"genre_scores_gemma":[0.99829286,0.00030816454,0.00061620236,0.0003948634,0.000036543763,0.000096285796,0.000055961766,0.000021939182,0.00017718208],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9985765,0.00005763805,0.0005055882,0.00042261631,0.0001427882,0.00029485594],"domain_scores_gemma":[0.99947447,0.000059522627,0.00014409712,0.00013669494,0.00009385569,0.00009136062],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028758572,0.00024575798,0.00089745014,0.00008008092,0.00013168796,0.00004781092,0.000045781224,0.00014770249,0.00006294862],"category_scores_gemma":[0.000006598946,0.00017470932,0.000095204516,0.000111019144,0.0003324301,0.00018308927,0.000022877515,0.00017162174,8.894958e-7],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.65019524,0.0011153632,0.34462538,0.0002798988,0.00009474636,0.0000029174419,0.00020122675,0.0000012517766,0.0011724301,0.000014371201,0.00006187708,0.002235294],"study_design_scores_gemma":[0.7513249,0.0010149376,0.24580434,0.00019246498,0.000109144734,0.000013128575,0.000017776443,0.00012947347,0.0010317508,0.000007506044,0.00017209674,0.00018246907],"about_ca_topic_score_codex":0.00016609891,"about_ca_topic_score_gemma":0.000100918325,"teacher_disagreement_score":0.10112969,"about_ca_system_score_codex":0.000034688088,"about_ca_system_score_gemma":0.00004754125,"threshold_uncertainty_score":0.7124439},"labels":[],"label_agreement":null},{"id":"W2122704841","doi":"10.1128/jcm.42.8.3475-3482.2004","title":"Interlaboratory Comparison of Results of Susceptibility Testing with Caspofungin against <i>Candida</i> and <i>Aspergillus</i> Species","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":173,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Caspofungin; Broth microdilution; Reproducibility; Microbiology; Biology; Aspergillus; Serial dilution; Fluconazole; Fungi imperfecti; Minimum inhibitory concentration; Antifungal; Chromatography; Chemistry; Medicine; Antibiotics; Pathology","score_opus":0.057879989372186844,"score_gpt":0.3631748959356033,"score_spread":0.30529490656341646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122704841","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99734026,0.0009830828,0.0001933281,0.0005862446,0.00016092074,0.0001467674,0.00006888462,0.0000063803786,0.0005141048],"genre_scores_gemma":[0.99489415,0.00019044925,0.00438211,0.00032685057,0.0001488403,2.3267012e-7,0.000008309302,0.00001068252,0.000038370752],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965752,0.00020614073,0.002629466,0.00026314694,0.00011523781,0.00021084586],"domain_scores_gemma":[0.99550986,0.0011995647,0.0017382484,0.00030130782,0.0010856019,0.00016542237],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020383373,0.0001663842,0.001536834,0.00008855882,0.000031397707,0.0000042339216,0.00013872655,0.00022063407,0.000009845289],"category_scores_gemma":[0.003311122,0.00010847946,0.00020725113,0.0002300742,0.0012527311,0.000068132795,0.000050846418,0.0006475116,0.0000011027989],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0070890402,0.0007352713,0.66140187,0.00015805573,0.00013119102,0.000038202426,0.00023824383,0.000042550793,0.32804155,0.00002033814,0.00042244728,0.001681228],"study_design_scores_gemma":[0.018286465,0.016824897,0.8508913,0.0018774223,0.0003624976,0.00033311534,0.0021400088,0.00001018399,0.103352174,0.00011803921,0.00553008,0.00027379367],"about_ca_topic_score_codex":0.000030695242,"about_ca_topic_score_gemma":0.00027250737,"teacher_disagreement_score":0.22468936,"about_ca_system_score_codex":0.000052499337,"about_ca_system_score_gemma":0.0005882951,"threshold_uncertainty_score":0.461574},"labels":[],"label_agreement":null},{"id":"W2122817117","doi":"10.1128/ec.00385-05","title":"Transcript Profiles of <i>Candida albicans</i> Cortical Actin Patch Mutants Reflect Their Cellular Defects: Contribution of the Hog1p and Mkc1p Signaling Pathways","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research","keywords":"Biology; Cell biology; Endocytosis; Mutant; Actin; Cytochalasin D; Green fluorescent protein; Osmotic shock; Candida albicans; Signal transduction; Cytoskeleton; Gene; Cell; Biochemistry; Genetics","score_opus":0.010754909991477653,"score_gpt":0.2159272975852814,"score_spread":0.20517238759380374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122817117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99558914,0.0013833436,0.000759333,0.00009829486,0.00009393032,0.00062350725,0.00007416538,0.000024466188,0.0013538015],"genre_scores_gemma":[0.999488,0.000052574997,0.00009641189,0.00007079944,0.00006392391,0.0000069256635,0.0000293215,0.00001922366,0.0001728246],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99836695,0.00013705295,0.0005283295,0.0003044704,0.00035123006,0.00031197089],"domain_scores_gemma":[0.99893767,0.00026298309,0.00019386446,0.00036175695,0.00015823978,0.000085489526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004487682,0.00019548474,0.0004984325,0.00003735964,0.00010321807,0.000008848068,0.00010751126,0.00012969725,0.000084440406],"category_scores_gemma":[0.00012952197,0.00012715721,0.00020013626,0.00023282315,0.00030616493,0.000048248578,0.000026650046,0.00027972736,0.000001940549],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003429355,0.00025160526,0.3316254,0.00024179148,0.00001839269,0.000011088348,0.0001770549,0.0000031138059,0.66688657,0.00016964984,0.000056934103,0.00021547843],"study_design_scores_gemma":[0.0010750376,0.0002475716,0.29785696,0.00017854865,0.0001450337,0.000005177337,0.00030778404,0.000101612655,0.69966465,0.00028553567,0.000039941904,0.000092148926],"about_ca_topic_score_codex":0.00025216502,"about_ca_topic_score_gemma":0.00012035399,"teacher_disagreement_score":0.033768456,"about_ca_system_score_codex":0.000053833333,"about_ca_system_score_gemma":0.00016108436,"threshold_uncertainty_score":0.5185321},"labels":[],"label_agreement":null},{"id":"W2122986119","doi":"10.3109/13693786.2010.512300","title":"Early treatment of candidemia in adults: a review","year":2010,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Invasive candidiasis; Antifungal; Medicine; Intensive care medicine; Biomarker; Retrospective cohort study; Clinical significance; Internal medicine; Biology; Fluconazole; Dermatology","score_opus":0.032670844078457405,"score_gpt":0.39514279814999054,"score_spread":0.36247195407153315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122986119","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006301276,0.9956151,0.0000018691812,0.0004076465,0.00024390566,0.0016462764,0.000025954152,0.000016693453,0.0014124184],"genre_scores_gemma":[0.00011936697,0.9983654,0.000058191967,0.00039568736,0.00019961192,0.00026082824,0.00009946567,0.000025327497,0.0004761074],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971506,0.00030314407,0.001279139,0.00047499358,0.00042483147,0.00036727893],"domain_scores_gemma":[0.9980324,0.0006587199,0.00030653182,0.0005833511,0.00007174384,0.00034727808],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006308313,0.00032745002,0.004429147,0.0001521563,0.000014248481,0.0000010948488,0.00018726783,0.0012377147,0.0027348523],"category_scores_gemma":[0.0025707586,0.00019957674,0.0006005469,0.00034801083,0.00033439338,0.000012574088,0.00003718313,0.00086818024,0.000113505994],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006450526,0.00039285948,0.0019185346,0.08134819,0.000061984625,0.0005097925,0.000027790207,1.5514486e-10,1.5091113e-7,0.00004739056,0.0008094198,0.91481936],"study_design_scores_gemma":[0.0008114296,0.0009643226,0.0019200005,0.13033389,0.00069386116,0.00011471914,0.000002529422,2.1574245e-7,1.6256224e-7,0.0000108715985,0.8650346,0.000113451686],"about_ca_topic_score_codex":0.00035169173,"about_ca_topic_score_gemma":0.0009192712,"teacher_disagreement_score":0.91470593,"about_ca_system_score_codex":0.0002677598,"about_ca_system_score_gemma":0.0019993493,"threshold_uncertainty_score":0.99817675},"labels":[],"label_agreement":null},{"id":"W2123080572","doi":"10.1128/jcm.01113-08","title":"Utility of the Germ Tube Test for Direct Identification of <i>Candida albicans</i> from Positive Blood Culture Bottles","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont; McGill University","funders":"","keywords":"Germ tube; Candida albicans; Microbiology; Blood culture; Biology; Corpus albicans; Identification (biology); Antibiotics","score_opus":0.03394531389926243,"score_gpt":0.3454191089278754,"score_spread":0.311473795028613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123080572","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970028,0.00078962086,0.000112705515,0.0006762194,0.00033856914,0.00024938484,0.0006067693,0.000002964985,0.00022098399],"genre_scores_gemma":[0.99815595,0.00045364405,0.00046613955,0.00030318735,0.0002401837,0.0000010245492,0.000022839647,0.000006851129,0.00035015703],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975898,0.0001830345,0.0018090416,0.00019556953,0.00008693768,0.00013560428],"domain_scores_gemma":[0.99534047,0.0020395063,0.0014661598,0.00030715403,0.0007735178,0.000073208896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009858218,0.000108150125,0.00089899893,0.000026288622,0.000056175068,0.000001994209,0.0002084226,0.0002516024,0.00005447898],"category_scores_gemma":[0.0047932533,0.000061191815,0.0007033669,0.00009930306,0.0007988061,0.000040421284,0.00003291695,0.00036405787,0.0000011069936],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009863038,0.00068720296,0.49945325,0.000028566605,0.00018602944,0.0000035247376,0.00011073448,1.5965333e-7,0.4958598,0.0000076764,0.0023603032,0.00031643803],"study_design_scores_gemma":[0.0017408764,0.0008238375,0.82989675,0.00012367088,0.00038864423,0.000067146924,0.000071203016,0.0000035263379,0.16491759,0.00016328791,0.001753857,0.000049621987],"about_ca_topic_score_codex":0.000030193003,"about_ca_topic_score_gemma":0.000055117198,"teacher_disagreement_score":0.3309422,"about_ca_system_score_codex":0.000011840747,"about_ca_system_score_gemma":0.00033669054,"threshold_uncertainty_score":0.5738318},"labels":[],"label_agreement":null},{"id":"W2123116500","doi":"10.1111/myc.12063","title":"Invasive fungal infections in paediatric acute myeloid leukaemia","year":2013,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; Centre Hospitalier Universitaire de Sherbrooke; Alberta Hospital Edmonton; Janeway Children's Health and Rehabilitation Centre; Centre hospitalier universitaire de Québec; Cancer Care South East; London Health Sciences Centre; McMaster Children's Hospital; Hamilton Health Sciences; Centre Hospitalier Universitaire Sainte-Justine; Montreal Children's Hospital; Hospital for Sick Children; University of Alberta Hospital; CancerCare Manitoba; BC Children's Hospital; SickKids Foundation; Stollery Children's Hospital; Izaak Walton Killam Health Centre; Alberta Children's Hospital; Institute for Clinical Evaluative Sciences; Population Health Research Institute; Children's Hospital of Eastern Ontario","funders":"Canadian Institutes of Health Research","keywords":"Neutropenia; Sepsis; Medicine; Population; Transplantation; Internal medicine; Hematopoietic stem cell transplantation; Immunology; Myeloid leukaemia; Cohort; Aspergillosis; Chemotherapy","score_opus":0.01179705590887425,"score_gpt":0.25872149358443186,"score_spread":0.2469244376755576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123116500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887918,0.0005318112,0.000028303948,0.0004990108,0.00012915324,0.00041911105,0.000008202179,0.000071563794,0.009521036],"genre_scores_gemma":[0.99613607,0.00056112476,0.00018188499,0.00052050204,0.00016616596,0.00006746389,0.000016962267,0.000013970481,0.0023358464],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99901366,0.00004035999,0.00023830228,0.0002481479,0.00017642547,0.000283087],"domain_scores_gemma":[0.9992683,0.00018356644,0.000043663244,0.0002735704,0.00010577555,0.00012512552],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00011244733,0.0001293322,0.0002506298,0.00015688884,0.000067804685,0.000024931414,0.00006559843,0.00010271387,0.0009527124],"category_scores_gemma":[0.00040734216,0.000107248685,0.00009868634,0.00041868348,0.00006405091,0.00019964192,0.000042544507,0.00026286193,0.0009934707],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003622938,0.00017606636,0.97568774,0.000052551448,0.00003107591,0.000053988766,0.00014720499,0.0000023119112,0.0120789185,0.00008639018,0.008382737,0.0032647895],"study_design_scores_gemma":[0.00068973436,0.00020724583,0.9935393,0.000043138236,0.000059145954,0.0000345383,0.00025019585,0.000021300679,0.0031977259,0.0004507672,0.0013806014,0.00012634737],"about_ca_topic_score_codex":0.00047757875,"about_ca_topic_score_gemma":0.0008080648,"teacher_disagreement_score":0.017851522,"about_ca_system_score_codex":0.00013369787,"about_ca_system_score_gemma":0.00020686108,"threshold_uncertainty_score":0.99996054},"labels":[],"label_agreement":null},{"id":"W2123488224","doi":"10.2471/blt.11.089441","title":"Global burden of chronic pulmonary aspergillosis as a sequel to pulmonary tuberculosis","year":2011,"lang":"en","type":"article","venue":"Bulletin of the World Health Organization","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":418,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Sungkyunkwan University; University of Delhi; Wellcome Trust","keywords":"Medicine; Tuberculosis; Pulmonary tuberculosis; Incidence (geometry); Population; Demography; Global health; Public health; Environmental health; Pathology","score_opus":0.01624088789503256,"score_gpt":0.2751266996667824,"score_spread":0.2588858117717498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123488224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8809459,0.0020308825,0.00020102871,0.07397403,0.0004234967,0.0021282062,0.000071190385,0.00012036073,0.04010491],"genre_scores_gemma":[0.9927592,0.00019311033,0.00078259583,0.0019096086,0.00012243005,0.000006553354,0.000020204332,0.000030039488,0.0041762334],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983057,0.00013207336,0.0005798294,0.00030518684,0.0003940832,0.00028314054],"domain_scores_gemma":[0.99853736,0.000039600727,0.00026853083,0.0005923834,0.00037845306,0.00018365144],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003637096,0.00015868107,0.00040220618,0.00008395917,0.00013168814,0.000003379998,0.0002352715,0.00007666011,0.003038658],"category_scores_gemma":[0.0003813302,0.00012374527,0.0001017621,0.0012583248,0.00010305031,0.000020069587,0.00015175393,0.000116977215,0.00013276932],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074286136,0.00097151555,0.9474061,0.0020249225,0.0001230128,0.000015181394,0.0010869508,0.00006382294,0.0065581566,0.0034657281,0.028896095,0.008645642],"study_design_scores_gemma":[0.0003177032,0.0003839572,0.97552866,0.00072377396,0.00009786517,0.000032124226,0.00028480505,0.00004138316,0.0074291825,0.0002835404,0.014720291,0.00015670499],"about_ca_topic_score_codex":0.0036439707,"about_ca_topic_score_gemma":0.00032253636,"teacher_disagreement_score":0.11181333,"about_ca_system_score_codex":0.0005587859,"about_ca_system_score_gemma":0.0005146981,"threshold_uncertainty_score":0.9978727},"labels":[],"label_agreement":null},{"id":"W2123607325","doi":"10.1128/iai.01483-07","title":"In Vivo Analysis of <i>Aspergillus fumigatus</i> Developmental Gene Expression Determined by Real-Time Reverse Transcription-PCR","year":2008,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Biology; Aspergillus fumigatus; Gene expression; Gene; In vivo; In vitro; Microbiology; Hypha; Molecular biology; Genetics","score_opus":0.01495288510446345,"score_gpt":0.2525711920552429,"score_spread":0.23761830695077948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123607325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978878,0.000071149174,0.00011990102,0.000026497863,0.00004005878,0.0001442628,0.000027876538,0.00002562845,0.0016568139],"genre_scores_gemma":[0.99659353,0.0015173241,0.0003415311,0.00010165776,0.000008948347,0.000005942579,0.00005921921,0.0000067421834,0.0013650758],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99911416,0.00010379753,0.00032808314,0.00017373389,0.00014927457,0.00013096807],"domain_scores_gemma":[0.99956197,0.000038601833,0.00007152712,0.00017598958,0.000074439704,0.00007749106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002170241,0.00011507782,0.0003580402,0.00021183756,0.00013325282,0.000003929587,0.000029951912,0.0001007643,0.0006394141],"category_scores_gemma":[0.000059324128,0.000103912935,0.00011760271,0.0005548884,0.00012523889,0.00016484146,0.000016798946,0.0001474571,0.000005062822],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002611614,0.00019603068,0.24208586,0.00002335905,0.00006668852,0.00000653598,0.0005799851,0.0000017106235,0.75587076,7.7001795e-7,0.00074004545,0.00016710987],"study_design_scores_gemma":[0.0009753764,0.0001120288,0.6017368,0.000039531584,0.00014839623,0.000022564398,0.000116436306,0.000099064004,0.39541894,0.000003458879,0.0012248841,0.0001025307],"about_ca_topic_score_codex":0.0028146766,"about_ca_topic_score_gemma":0.00036175837,"teacher_disagreement_score":0.36045182,"about_ca_system_score_codex":0.0000919483,"about_ca_system_score_gemma":0.00005677079,"threshold_uncertainty_score":0.70011365},"labels":[],"label_agreement":null},{"id":"W2124017982","doi":"10.1093/jac/dku528","title":"Rate of <i>cyp51A</i> mutation in <i>Aspergillus fumigatus</i> among lung transplant recipients with targeted prophylaxis","year":2015,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; Public Health Ontario; University of Toronto","funders":"University of Manchester","keywords":"Aspergillus fumigatus; Voriconazole; Itraconazole; Microbiology; Aspergillosis; Azole; Biology; Medicine; Antifungal; Immunology","score_opus":0.009584829243073566,"score_gpt":0.24166841817634038,"score_spread":0.2320835889332668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124017982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980539,0.00019783711,0.0005569655,0.0004828076,0.00016175065,0.00032301553,0.000012788047,0.000009671065,0.00020126016],"genre_scores_gemma":[0.99762845,0.00025629313,0.0013683599,0.000482527,0.00009495954,9.1458014e-7,0.00001184265,0.000030473688,0.00012615086],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837464,0.0000970986,0.0007509441,0.00019111259,0.00033858663,0.00024764345],"domain_scores_gemma":[0.99854374,0.000035098405,0.0004993,0.00018262173,0.0005615901,0.00017766247],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076945924,0.0001938379,0.00063960755,0.00020037766,0.000025390817,0.000014462422,0.00012421669,0.00013591796,0.000027292284],"category_scores_gemma":[0.000052922685,0.00013722279,0.00016164785,0.0004306124,0.00017611473,0.00024401872,0.000005531887,0.0003726532,0.0000014610238],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013688812,0.00060447404,0.57124907,0.00014828538,0.00014089857,0.00033833776,0.0023438677,0.00014372234,0.40896332,0.0000034143009,0.0016999944,0.0006757967],"study_design_scores_gemma":[0.01379808,0.002507064,0.41465598,0.001365407,0.00010059266,0.00028193608,0.00028074373,0.00011837156,0.5663999,0.000029057204,0.0002148057,0.00024809258],"about_ca_topic_score_codex":0.00007663375,"about_ca_topic_score_gemma":0.00008444906,"teacher_disagreement_score":0.15743655,"about_ca_system_score_codex":0.00014995881,"about_ca_system_score_gemma":0.00038834556,"threshold_uncertainty_score":0.5595783},"labels":[],"label_agreement":null},{"id":"W2124120302","doi":"10.1345/aph.1k530","title":"Complexity of Interactions Between Voriconazole and Antiretroviral Agents","year":2008,"lang":"en","type":"review","venue":"Annals of Pharmacotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Capital District Health Authority","funders":"","keywords":"Voriconazole; Efavirenz; Darunavir; Medicine; Pharmacology; Etravirine; Raltegravir; Ritonavir; Reverse-transcriptase inhibitor; Integrase inhibitor; Maraviroc; Reverse transcriptase; Virology; Human immunodeficiency virus (HIV); Chemistry; Viral load; Antiretroviral therapy; Antifungal","score_opus":0.43125177648262775,"score_gpt":0.5209953039116446,"score_spread":0.08974352742901687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124120302","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018358337,0.9798048,0.000019984587,0.00007958736,0.0000990209,0.00053514226,0.00033335044,0.000018726309,0.0007510143],"genre_scores_gemma":[0.030502358,0.96843684,0.00009828323,0.0001663986,0.00019359295,0.0000075841863,0.000093753355,0.000033840624,0.00046737643],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982714,0.00013308246,0.00079777907,0.00030192258,0.0002770007,0.00021878396],"domain_scores_gemma":[0.99868566,0.00015124062,0.000537948,0.0002982324,0.00018496264,0.00014194661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017191377,0.0002900551,0.0020221693,0.00019344053,0.00005087959,0.0000044055764,0.00013902909,0.00011977505,0.00034236],"category_scores_gemma":[0.000028174529,0.00023361834,0.00064625003,0.00024682717,0.0004529552,0.00008620635,0.000031583684,0.0003355732,0.0000093431745],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012017042,0.00032448795,0.012101743,0.010884679,0.0009862001,0.000012537272,0.00011060728,1.8307867e-8,0.00048181464,0.00004786181,0.0077065746,0.9672233],"study_design_scores_gemma":[0.00064559025,0.00036587508,0.0072244485,0.004091827,0.00044503523,0.00002152028,0.000012825637,0.000003177739,0.002122472,0.00005655132,0.9847958,0.00021489432],"about_ca_topic_score_codex":0.000067099856,"about_ca_topic_score_gemma":0.0000022034026,"teacher_disagreement_score":0.9770892,"about_ca_system_score_codex":0.000017979988,"about_ca_system_score_gemma":0.00017204788,"threshold_uncertainty_score":0.9526679},"labels":[],"label_agreement":null},{"id":"W2124198277","doi":"10.1128/ec.00103-10","title":"Heterologous Expression of Candida albicans Cell Wall-Associated Adhesins in Saccharomyces cerevisiae Reveals Differential Specificities in Adherence and Biofilm Formation and in Binding Oral Streptococcus gordonii","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Dental and Craniofacial Research; National Institutes of Health; Johns Hopkins University","keywords":"Streptococcus gordonii; Candida albicans; Bacterial adhesin; Microbiology; Biology; Biofilm; Corpus albicans; Saccharomyces cerevisiae; Virulence; Fungal protein; Yeast; Bacteria; Biochemistry; Gene; Genetics","score_opus":0.015190397118006778,"score_gpt":0.25116730524471165,"score_spread":0.23597690812670488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124198277","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987316,0.00022783951,0.000005082949,0.00004514446,0.00007150074,0.0005796983,0.00003929035,0.00001401627,0.00028583079],"genre_scores_gemma":[0.9992908,0.00026405352,0.000119787626,0.000020519781,0.000016938044,0.000011952098,0.000056124132,0.000013197594,0.0002066244],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99844354,0.00009772554,0.0005939662,0.0003354573,0.00019833902,0.0003309957],"domain_scores_gemma":[0.9993079,0.00015627338,0.00020262538,0.00020499525,0.000034425088,0.000093820934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002973917,0.00019810235,0.0005328661,0.0002574498,0.00003772776,0.000023075485,0.000085061314,0.0001902052,0.00016537761],"category_scores_gemma":[0.000086200984,0.00017107683,0.00004358177,0.00021560169,0.00013531983,0.00017954265,0.000060941373,0.0004268593,0.0000021287667],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019355683,0.00025944176,0.7122238,0.0002914914,0.0000018998666,0.00002017813,0.0008966675,0.0000011053211,0.28572717,0.0000023600892,0.000020170308,0.0003621606],"study_design_scores_gemma":[0.0021793852,0.0002748622,0.9542941,0.00045886135,0.000016716816,0.000002106455,0.0012479614,0.00032083565,0.04101505,0.000043437172,0.000003416949,0.00014327644],"about_ca_topic_score_codex":0.00096818834,"about_ca_topic_score_gemma":0.015587868,"teacher_disagreement_score":0.24471211,"about_ca_system_score_codex":0.00007459098,"about_ca_system_score_gemma":0.000052788488,"threshold_uncertainty_score":0.8698396},"labels":[],"label_agreement":null},{"id":"W2124706137","doi":"10.1086/432069","title":"Surface Response Modeling to Examine the Combination of Amphotericin B Deoxycholate and 5‐Fluorocytosine for Treatment of Invasive Candidiasis","year":2005,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Valeant Pharmaceuticals International","keywords":"Amphotericin B; Invasive candidiasis; Amphotericin B deoxycholate; Microbiology; Medicine; Biology; Antifungal; Fluconazole; Caspofungin","score_opus":0.025002108747162227,"score_gpt":0.30160540287716486,"score_spread":0.2766032941300026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124706137","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950426,0.0020924087,0.0014176642,0.0009552356,0.000030661457,0.0004236429,0.000023465918,0.0000041616836,0.000010128074],"genre_scores_gemma":[0.9985194,0.0011818702,0.00009170918,0.00010868368,0.000043910084,0.0000031585807,0.000001290701,0.000008289906,0.000041645515],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991754,0.00014411309,0.0003570176,0.000064355845,0.00016526664,0.00009378966],"domain_scores_gemma":[0.9983401,0.00078786426,0.00023992441,0.0001607927,0.00038859397,0.000082753104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004908265,0.00009065573,0.0003057421,0.00006342323,0.00008026312,0.000007366454,0.000049998736,0.000023224935,0.000008311336],"category_scores_gemma":[0.0006310968,0.000046176217,0.000106107065,0.0001206438,0.00006809447,0.0000796769,0.000010751451,0.000034705747,3.2301847e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.07510942,0.0032886988,0.40159577,0.00038190308,0.00082717295,0.000011149699,0.009244658,0.030736966,0.45721403,0.000038291422,0.0003502135,0.021201722],"study_design_scores_gemma":[0.00869679,0.012463856,0.8704616,0.0004308285,0.001625171,0.00012397298,0.0019125118,0.004370894,0.09938152,0.00027833268,0.00011112129,0.00014339513],"about_ca_topic_score_codex":0.00011412521,"about_ca_topic_score_gemma":0.00013931174,"teacher_disagreement_score":0.4688658,"about_ca_system_score_codex":0.00013391676,"about_ca_system_score_gemma":0.00015053173,"threshold_uncertainty_score":0.18830115},"labels":[],"label_agreement":null},{"id":"W2125056807","doi":"10.1128/aac.47.3.847-853.2003","title":"Relationships between Respiration and Susceptibility to Azole Antifungals in <i>Candida glabrata</i>","year":2003,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministère des Transports","funders":"","keywords":"Sodium azide; Azole; Biology; Microbiology; Candida glabrata; Mutant; Salicylhydroxamic acid; Respiratory chain; Biochemistry; Mitochondrion; Enzyme; Candida albicans; Gene; Antifungal","score_opus":0.033767901104509834,"score_gpt":0.29348689990851035,"score_spread":0.2597189988040005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125056807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958068,0.000058998925,0.0002139795,0.0025014542,0.000040601768,0.00055722543,0.000020550598,0.000026101496,0.0007742845],"genre_scores_gemma":[0.99420375,0.00026797812,0.00075953745,0.0041828738,0.000053238764,0.0000045462434,0.00003023668,0.000019892674,0.00047795725],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99863356,0.00012743629,0.00035904726,0.00046935247,0.00013820635,0.00027237355],"domain_scores_gemma":[0.9993672,0.000060395658,0.000058067377,0.0002716673,0.00005808811,0.00018457696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006304784,0.0001803852,0.00035198315,0.0000997852,0.0001599687,0.000049740484,0.000045334906,0.00015040686,0.000074450676],"category_scores_gemma":[0.00013223174,0.00016274376,0.000047413992,0.00027484665,0.00009811669,0.00013485608,0.000018398961,0.00023574759,0.00001591941],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001873214,0.000108699955,0.97185296,0.00006318159,0.000018176426,0.0000054378474,0.00056591874,6.225946e-7,0.021905974,0.00012911101,0.0033833084,0.0017792633],"study_design_scores_gemma":[0.0016731016,0.00013657555,0.9729624,0.000090460555,0.000020986943,0.0000060221214,0.00013490143,0.0000061576548,0.011543266,0.00016023089,0.013092604,0.00017334458],"about_ca_topic_score_codex":0.00008795792,"about_ca_topic_score_gemma":0.00034965156,"teacher_disagreement_score":0.010362708,"about_ca_system_score_codex":0.00004677767,"about_ca_system_score_gemma":0.00005922065,"threshold_uncertainty_score":0.66364974},"labels":[],"label_agreement":null},{"id":"W2125176616","doi":"10.1128/ec.00074-09","title":"Role of Ndt80p in Sterol Metabolism Regulation and Azole Resistance in <i>Candida albicans</i>","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Biotechnology Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Biology; Chromatin immunoprecipitation; Candida albicans; Promoter; Transcription factor; Gene expression; Gene; Regulation of gene expression; Regulon; Antifungal drug; Transcriptional regulation; Gene expression profiling; Genetics; Cell biology","score_opus":0.005370868258480833,"score_gpt":0.22493871060953766,"score_spread":0.21956784235105684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125176616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9761611,0.0038367999,0.000027742675,0.00036850854,0.000022287986,0.00027970524,0.0000038311246,0.000011479099,0.019288545],"genre_scores_gemma":[0.9971253,0.00014780268,0.0005428158,0.0002322901,0.000028469158,0.0000028525199,0.000007903453,0.000007701409,0.0019048273],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99891925,0.000050324343,0.00036350836,0.000257617,0.00020475437,0.00020455457],"domain_scores_gemma":[0.9994972,0.000048298272,0.000077365905,0.0002713738,0.000035674937,0.000070128524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027487514,0.00011391426,0.0003522403,0.00011533192,0.000016808404,0.0000062218915,0.000054313674,0.00007354484,0.0000690152],"category_scores_gemma":[0.000041799452,0.00010609336,0.00004117948,0.00026318888,0.000058875972,0.00009003844,0.000012802138,0.00014936674,0.000004013249],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009869572,0.00041659738,0.93614197,0.00017265734,0.0000056045196,0.000023721232,0.0011870903,0.000015766496,0.05647337,0.0006862563,0.00022990532,0.0036601236],"study_design_scores_gemma":[0.0015532373,0.0000699574,0.9879949,0.00012704718,0.000020601283,0.0000011395209,0.00020597062,0.00012801618,0.0074237315,0.002028717,0.00036179123,0.0000848902],"about_ca_topic_score_codex":0.00010627711,"about_ca_topic_score_gemma":0.0012871447,"teacher_disagreement_score":0.05185295,"about_ca_system_score_codex":0.000048152877,"about_ca_system_score_gemma":0.000057501216,"threshold_uncertainty_score":0.43263617},"labels":[],"label_agreement":null},{"id":"W2125244981","doi":"10.1128/ec.00305-10","title":"Conjugated Linoleic Acid Inhibits Hyphal Growth in Candida albicans by Modulating Ras1p Cellular Levels and Downregulating TEC1 Expression","year":2011,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; University of California, Irvine; Fonds Québécois de la Recherche sur la Nature et les Technologies; Carnegie Mellon University","keywords":"Candida albicans; Hypha; Biology; Conjugated linoleic acid; Cell biology; Downregulation and upregulation; Yeast; Corpus albicans; Growth inhibition; Gene expression; Microbiology; Cell growth; Linoleic acid; Biochemistry; Gene; Fatty acid","score_opus":0.022862491408554637,"score_gpt":0.2265947442337551,"score_spread":0.20373225282520047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125244981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99113864,0.0011170135,0.0006235452,0.000050430885,0.0000727658,0.00046293464,0.000017273644,0.00007246509,0.0064449417],"genre_scores_gemma":[0.99689174,0.00002074052,0.0018575802,0.00010844145,0.00006130196,0.000009955426,0.00004065445,0.000038841292,0.0009707303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979438,0.000103621445,0.00055024924,0.0005824402,0.00032265836,0.0004972188],"domain_scores_gemma":[0.9991049,0.0000875091,0.00014917924,0.0003200195,0.00009015531,0.00024822186],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038942043,0.0002876859,0.00047984463,0.00011116555,0.00012839303,0.000020733974,0.00009921101,0.00019349549,0.00039012852],"category_scores_gemma":[0.0001593031,0.00025157802,0.000074212105,0.0002569647,0.00015799327,0.00016092372,0.00009671294,0.00038723837,0.00002020096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014183906,0.00017218255,0.48831773,0.00018696113,0.000008312507,0.00008081892,0.0011974382,0.0000017892718,0.50920755,0.0000123685795,0.00010274191,0.0005702793],"study_design_scores_gemma":[0.0016994984,0.00015881326,0.42486694,0.00032722284,0.00003458569,0.000010341461,0.00045635915,0.00083235174,0.5712686,0.000116226525,0.0000061150145,0.00022289621],"about_ca_topic_score_codex":0.00059776497,"about_ca_topic_score_gemma":0.000077677294,"teacher_disagreement_score":0.063450776,"about_ca_system_score_codex":0.00009816869,"about_ca_system_score_gemma":0.00009647501,"threshold_uncertainty_score":0.9999936},"labels":[],"label_agreement":null},{"id":"W2125408628","doi":"10.1128/iai.68.12.7159-7161.2000","title":"Repression of Hyphal Proteinase Expression by the Mitogen-Activated Protein (MAP) Kinase Phosphatase Cpp1p of <i>Candida albicans</i> Is Independent of the MAP Kinase Cek1p","year":2000,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Biology; Candida albicans; Phosphatase; Protein kinase A; Mutant; Mitogen-activated protein kinase; DUSP6; Molecular biology; MAP kinase kinase kinase; Corpus albicans; Kinase; Mitogen-activated protein kinase kinase; Cell biology; Gene; Microbiology; Biochemistry; Protein phosphatase 2; Phosphorylation","score_opus":0.010477636913993239,"score_gpt":0.2520044334881813,"score_spread":0.24152679657418807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125408628","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99640375,0.001216704,0.000028800287,0.00024082822,0.000093725524,0.0013574454,0.00013093924,0.000020351394,0.00050747226],"genre_scores_gemma":[0.9981958,0.00015813888,0.00002286126,0.0001020674,0.000020196352,0.00005510081,0.00003522673,0.000014535597,0.0013960178],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982603,0.00032512966,0.00053591514,0.00025955896,0.00043072097,0.0001883697],"domain_scores_gemma":[0.9983597,0.00007043711,0.0003692216,0.00089935603,0.00020697665,0.000094302886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052796275,0.00019868354,0.00037223805,0.00004534795,0.0002545097,0.000010395324,0.00014491497,0.00015922275,0.0008772344],"category_scores_gemma":[0.00019188618,0.0001149648,0.00017194604,0.0002728762,0.00043440727,0.00014704902,0.00009844521,0.00045073804,0.000003061044],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002554749,0.00086172693,0.024354972,0.00043829047,0.000042090323,0.0000021528726,0.00060051447,0.0000024518536,0.9562316,0.000011352699,0.0014465062,0.013453573],"study_design_scores_gemma":[0.0017033945,0.00038310207,0.059072237,0.00073516567,0.000057738787,0.0000058168507,0.00022305494,0.000019810785,0.93251157,0.0000664164,0.0051198755,0.00010184168],"about_ca_topic_score_codex":0.005004849,"about_ca_topic_score_gemma":0.00006850389,"teacher_disagreement_score":0.034717266,"about_ca_system_score_codex":0.000047486927,"about_ca_system_score_gemma":0.000114339455,"threshold_uncertainty_score":0.96051013},"labels":[],"label_agreement":null},{"id":"W2125502424","doi":"10.3324/haematol.2012.083063","title":"Combined antifungal approach for the treatment of invasive mucormycosis in patients with hematologic diseases: a report from the SEIFEM and FUNGISCOPE registries","year":2013,"lang":"en","type":"letter","venue":"Haematologica","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":122,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Merck Sharp and Dohme; Robert Koch Institut; Masarykova Univerzita; Universität zu Köln; Julius-Maximilians-Universität Würzburg; Celgene; Universität des Saarlandes; Astellas Pharma; Universitätsklinikum Köln; Bundesministerium für Bildung und Forschung; Pfizer Pharmaceuticals; McGill University; Deutsches Zentrum für Infektionsforschung; BioCryst; Central European Institute of Technology; Gilead Sciences; Pfizer; Viropharma; Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology","keywords":"Mucormycosis; Antifungal; Amphotericin B; Medicine; Internal medicine; Hematologic Neoplasms; Hematopoietic stem cell transplantation; Leukemia; Intensive care medicine; Transplantation; Surgery; Dermatology","score_opus":0.02397617729043418,"score_gpt":0.23985988686912169,"score_spread":0.2158837095786875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125502424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9382521,0.0041157077,0.00021362325,0.049671162,0.00008499219,0.006786588,0.00063695555,0.000050258815,0.00018859231],"genre_scores_gemma":[0.97856677,0.00070633966,0.00081192155,0.015473215,0.0001178503,0.001142453,0.002634609,0.00004170201,0.00050511776],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974137,0.00016300331,0.00076194876,0.00080013834,0.0004462547,0.00041496003],"domain_scores_gemma":[0.9953433,0.0023616843,0.00069556496,0.001264592,0.00026621413,0.000068616304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014606194,0.0005013889,0.0016040016,0.000054915632,0.00018835237,0.00004916918,0.00027037796,0.00048347886,0.00005308412],"category_scores_gemma":[0.0006059815,0.0001999483,0.00026079235,0.0001889816,0.00084283645,0.00006293483,0.000065835105,0.00041470764,0.0000029675682],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016521069,0.0007837223,0.8593471,0.0006031046,0.00043189144,0.0005223292,0.00024783492,4.0620384e-7,0.0000017787518,0.000029611836,0.13619797,0.00018215588],"study_design_scores_gemma":[0.00514894,0.0032946405,0.97665983,0.0006163393,0.001642934,0.000103908205,0.0013391529,0.000042111304,0.000125416,0.00031357873,0.01026452,0.00044860513],"about_ca_topic_score_codex":0.00045623299,"about_ca_topic_score_gemma":0.000050138937,"teacher_disagreement_score":0.12593344,"about_ca_system_score_codex":0.000090238485,"about_ca_system_score_gemma":0.00022568429,"threshold_uncertainty_score":0.8153655},"labels":[],"label_agreement":null},{"id":"W2126319933","doi":"10.1056/nejmoa066906","title":"Anidulafungin versus Fluconazole for Invasive Candidiasis","year":2007,"lang":"en","type":"article","venue":"New England Journal of Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":896,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; McMaster University; Hamilton Health Sciences","funders":"Basilea Pharmaceutica; Viropharma; Pfizer; Duke Clinical Research Institute; Eli Lilly and Company; Astellas Pharma; U.S. Department of Veterans Affairs","keywords":"Anidulafungin; Echinocandin; Fluconazole; Medicine; Invasive candidiasis; Echinocandins; Antifungal; Randomized controlled trial; Pharmacology; Internal medicine; Dermatology; Caspofungin","score_opus":0.04012580657829622,"score_gpt":0.33589145033251816,"score_spread":0.29576564375422193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126319933","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9797199,0.0025928183,0.007723391,0.0055244537,0.0012794603,0.00026667755,0.0000037625234,0.000012150678,0.002877388],"genre_scores_gemma":[0.9911923,0.00033486652,0.001598252,0.000639793,0.0054700365,6.718062e-7,0.000008783892,0.000015500886,0.00073981576],"study_design_codex":"design_other","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9985246,0.000024244802,0.00058336835,0.00013289328,0.0004502808,0.00028459134],"domain_scores_gemma":[0.9975689,0.0011002639,0.00025279084,0.00016999015,0.0004254836,0.00048255394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017907774,0.00013907593,0.00052483036,0.00017713683,0.000053887066,0.0000058449655,0.00009727078,0.00008173202,0.00024182428],"category_scores_gemma":[0.0025723753,0.00009054008,0.0001419299,0.00016844302,0.00010323869,0.000095524585,0.000009619099,0.00026325762,0.0000042177935],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0875781,0.00034019194,0.17956848,0.00048270728,0.00087837636,0.0016277832,0.0041776914,0.00001175074,0.09685026,0.0013722788,0.09355182,0.5335606],"study_design_scores_gemma":[0.37419033,0.01912724,0.31332415,0.0015532743,0.0016593442,0.0014222785,0.005597846,0.00002905965,0.03811126,0.0017094745,0.24284828,0.0004274558],"about_ca_topic_score_codex":0.00007995067,"about_ca_topic_score_gemma":0.00055562455,"teacher_disagreement_score":0.5331331,"about_ca_system_score_codex":0.00011387029,"about_ca_system_score_gemma":0.0004266245,"threshold_uncertainty_score":0.36921173},"labels":[],"label_agreement":null},{"id":"W2127080406","doi":"10.1128/aac.49.5.1745-1752.2005","title":"<i>Candida albicans</i> Zinc Cluster Protein Upc2p Confers Resistance to Antifungal Drugs and Is an Activator of Ergosterol Biosynthetic Genes","year":2005,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":242,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; McGill University; Royal Victoria Hospital","funders":"Pfizer Canada","keywords":"Ergosterol; Biology; Ketoconazole; Candida albicans; Azole; Microbiology; Antifungal drug; Gene; Corpus albicans; Fluconazole; Biochemistry","score_opus":0.011630969000634981,"score_gpt":0.263765547723296,"score_spread":0.25213457872266104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127080406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986879,0.000103795,0.000080306,0.011534224,0.000035850237,0.0008234333,0.00007657098,0.000030149833,0.00043669072],"genre_scores_gemma":[0.97761726,0.0005945588,0.0012511885,0.017523875,0.00013479522,0.000009036482,0.000009662827,0.00004204721,0.0028175644],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984393,0.000049099304,0.00037789275,0.0005614602,0.00022350045,0.00034874323],"domain_scores_gemma":[0.9991073,0.00002024498,0.000119246935,0.00039011225,0.00010557413,0.00025750053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018300347,0.00028058275,0.0005035496,0.00008292371,0.00012709753,0.00004864633,0.00011586404,0.00013886408,0.0003056586],"category_scores_gemma":[0.000009691759,0.00023587875,0.000091412105,0.00013229663,0.00024886924,0.00017409302,0.000041464544,0.00012623587,0.0000070337173],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043545286,0.0005076371,0.046320073,0.00038946397,0.0001496481,0.0000075410376,0.002415339,4.2058912e-7,0.9086076,0.000038092854,0.01185886,0.025350794],"study_design_scores_gemma":[0.0045450404,0.0005728387,0.08899274,0.0005535666,0.00008560851,0.00001738962,0.00039064483,0.00003794649,0.77873635,0.00002158146,0.12555848,0.00048782196],"about_ca_topic_score_codex":0.00008641523,"about_ca_topic_score_gemma":0.0001363403,"teacher_disagreement_score":0.12987126,"about_ca_system_score_codex":0.000035931425,"about_ca_system_score_gemma":0.000072562965,"threshold_uncertainty_score":0.96188563},"labels":[],"label_agreement":null},{"id":"W2127142654","doi":"10.1046/j.1365-2958.2001.02672.x","title":"Ras links cellular morphogenesis to virulence by regulation of the MAP kinase and cAMP signalling pathways in the pathogenic fungus <i>Candida albicans</i>","year":2001,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":304,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"","keywords":"Biology; Candida albicans; Morphogenesis; Corpus albicans; Cell biology; Virulence; Mutant; Kinase; Microbiology; Gene; Genetics","score_opus":0.007902825284419625,"score_gpt":0.21228976267463737,"score_spread":0.20438693739021774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127142654","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911871,0.0040511554,0.0031028157,0.0009101007,0.000053965217,0.00056741235,0.000052938965,0.000009086191,0.00006544364],"genre_scores_gemma":[0.9971774,0.000096406846,0.00018531259,0.0023225625,0.000020222853,0.000018340786,0.00005389839,0.000014615947,0.00011121637],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863786,0.00029122765,0.0003232308,0.0003677713,0.00009931863,0.00028059725],"domain_scores_gemma":[0.9992414,0.00007820936,0.00009304367,0.00045957215,0.000070454604,0.000057289948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046253038,0.00016229691,0.00028290148,0.000051092687,0.0000750717,0.000008065478,0.00019816522,0.00021802347,0.000051165873],"category_scores_gemma":[0.00008041638,0.00010372306,0.00011022899,0.0002782821,0.0001812201,0.00001781821,0.00006559389,0.00024440986,0.000008445956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017163942,0.00007242102,0.020403726,0.000036638143,0.00001714054,0.00006048254,0.00032680872,0.000026046311,0.9779688,0.000046515055,0.00021412132,0.00065563194],"study_design_scores_gemma":[0.00078262214,0.0002384925,0.029440334,0.00011414598,0.00009077117,0.00008147768,0.0002795421,0.00004546054,0.962856,0.0001491515,0.0057396498,0.0001823346],"about_ca_topic_score_codex":0.0001208528,"about_ca_topic_score_gemma":0.000104198065,"teacher_disagreement_score":0.01511281,"about_ca_system_score_codex":0.00004533586,"about_ca_system_score_gemma":0.00006264892,"threshold_uncertainty_score":0.42297038},"labels":[],"label_agreement":null},{"id":"W2127172976","doi":"10.5430/jhm.v2n4p1","title":"Invasive fungal diseases in children with hematological malignancies and stem cell transplant recipients","year":2012,"lang":"en","type":"article","venue":"Journal of Hematological Malignancies","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Transplantation; Intensive care medicine; Fluconazole; Hematopoietic stem cell transplantation; Internal medicine; Aspergillosis; Adverse effect; Stem cell; Empiric therapy; Galactomannan; Immunology; Antifungal; Pathology; Biology","score_opus":0.0194282553225737,"score_gpt":0.24460212797075834,"score_spread":0.22517387264818464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127172976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98925096,0.009674485,0.000090481335,0.00028981295,0.00007073614,0.00034521508,0.000023557375,0.000024945106,0.00022982889],"genre_scores_gemma":[0.99804914,0.0008815436,0.0005963294,0.0002882206,0.00007312225,0.000010831568,0.0000042800234,0.000015648578,0.000080901584],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997551,0.00015279137,0.0008160845,0.00028076855,0.0005789631,0.0006203627],"domain_scores_gemma":[0.9984545,0.00031746156,0.00037743957,0.00020498091,0.00017440449,0.00047122597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044870365,0.0003183665,0.0011353114,0.00015097832,0.00009434258,0.000030584815,0.00016312505,0.00020759257,0.00006789103],"category_scores_gemma":[0.00015124511,0.00017635727,0.00020150053,0.00024272468,0.00041350338,0.00034293608,0.000053074233,0.00042318017,0.000008902799],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011617198,0.0009492333,0.9931878,0.00021034869,0.00006742318,0.0007164397,0.00042646416,0.0000012046889,0.0021816944,0.00080336153,0.00019844722,0.00009585847],"study_design_scores_gemma":[0.0017337776,0.0011012191,0.97711647,0.0007937113,0.00020490415,0.009081885,0.00087564805,0.0000012942879,0.008671083,0.00016323285,0.000030043684,0.00022672342],"about_ca_topic_score_codex":0.0000037755105,"about_ca_topic_score_gemma":0.000008255622,"teacher_disagreement_score":0.016071327,"about_ca_system_score_codex":0.00006588041,"about_ca_system_score_gemma":0.00013375652,"threshold_uncertainty_score":0.7191641},"labels":[],"label_agreement":null},{"id":"W2127319074","doi":"10.1128/jcm.41.12.5623-5632.2003","title":"Comparison of the Susceptibilities of <i>Candida</i> spp. to Fluconazole and Voriconazole in a 4-Year Global Evaluation Using Disk Diffusion","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":99,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Yonsei University College of Medicine; Pfizer Pharmaceuticals; Peking Union Medical College Hospital; Universiti Malaya; National Taiwan University Hospital; Centre Hospitalier Universitaire Vaudois; Peking Union Medical College; Hacettepe Üniversitesi; Universidad de Buenos Aires; Università degli Studi di Genova; University of Alberta; Wayne State University; National Taiwan University; Yonsei University; New York State Department of Health; Pfizer","keywords":"Fluconazole; Voriconazole; Microbiology; Candida albicans; Agar diffusion test; Corpus albicans; Candida parapsilosis; Biology; Veterinary medicine; Antifungal; Medicine; Bacteria","score_opus":0.08591204150488259,"score_gpt":0.4548341222271043,"score_spread":0.3689220807222217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127319074","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99811244,0.0007858062,0.000082530765,0.00023725657,0.00032321067,0.00025199816,0.00001613613,0.0000011050145,0.00018950063],"genre_scores_gemma":[0.998839,0.000057917085,0.0008823907,0.00014557732,0.000051217252,4.0286815e-7,0.0000011840009,0.0000040323525,0.000018249504],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975373,0.00046036602,0.0015609242,0.00015572875,0.00013618704,0.00014945868],"domain_scores_gemma":[0.9982573,0.00040681992,0.00067452143,0.00019472,0.00038377236,0.00008291046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025883317,0.00009429345,0.0008453922,0.000046943765,0.000024699204,0.0000028599852,0.00009736493,0.00015928881,0.0000695981],"category_scores_gemma":[0.0028750491,0.00005883199,0.00021243056,0.0001799236,0.000315394,0.00003600615,0.000050111474,0.00027291288,0.0000010163045],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083596195,0.00039043993,0.84803665,0.000043832348,0.000026170668,7.730494e-7,0.000114263894,0.00002311543,0.14948887,0.000117544965,0.00013859378,0.00078379415],"study_design_scores_gemma":[0.0029146397,0.0009584968,0.98575157,0.00025628056,0.00013484112,0.00004162198,0.0010299205,0.00008830024,0.007818747,0.0004950544,0.00044929964,0.00006123484],"about_ca_topic_score_codex":0.000037041522,"about_ca_topic_score_gemma":0.00021956548,"teacher_disagreement_score":0.14167012,"about_ca_system_score_codex":0.000080547936,"about_ca_system_score_gemma":0.00037743896,"threshold_uncertainty_score":0.344191},"labels":[],"label_agreement":null},{"id":"W2127708867","doi":"10.1080/03639040601077349","title":"Assessing the Antifungal Activity of a New Oral Lipid-Based Amphotericin B Formulation Following Administration to Rats Infected with<i>Aspergillus Fumigatus</i>","year":2007,"lang":"en","type":"article","venue":"Drug Development and Industrial Pharmacy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; British Columbia Centre for Disease Control","keywords":"Galactomannan; Aspergillus fumigatus; Amphotericin B; Spleen; Saline; Kidney; Pharmacology; Amphotericin B deoxycholate; Oral administration; Microbiology; Aspergillosis; Biology; Medicine; Chemistry; Immunology; Endocrinology; Antifungal","score_opus":0.0770259185064182,"score_gpt":0.3644892842924351,"score_spread":0.2874633657860169,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127708867","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952347,0.000018985646,0.0026285755,0.00083356525,0.00023172835,0.00074938306,0.0000018371568,0.000040619278,0.00026059427],"genre_scores_gemma":[0.9978309,0.0000018185671,0.0013924576,0.00030586353,0.0002282596,0.0000052602313,0.000041243777,0.000015624022,0.0001785585],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985167,0.000064647495,0.00042294196,0.0002797445,0.00042291216,0.00029306454],"domain_scores_gemma":[0.99920666,0.00015492065,0.00016534462,0.00014695303,0.00010527483,0.00022083704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010319451,0.0002038367,0.0003260135,0.0001150304,0.00025995637,0.000098454686,0.00006480974,0.00007371411,0.000029621642],"category_scores_gemma":[0.00016814405,0.00013996246,0.00006605531,0.0005334433,0.000049093225,0.00038761573,0.000028199836,0.0002792849,0.0000021565195],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005160163,0.00023120109,0.61103994,0.00005158358,0.000121044664,0.00003201323,0.0012357451,0.000013555789,0.24798739,0.000008964228,0.0011198506,0.13299856],"study_design_scores_gemma":[0.004320815,0.00013576308,0.3595649,0.00020409921,0.00010070029,0.000003334254,0.00018563903,0.00018557356,0.6276566,0.0000019877816,0.007451637,0.00018898507],"about_ca_topic_score_codex":0.00015558608,"about_ca_topic_score_gemma":0.00026071325,"teacher_disagreement_score":0.3796692,"about_ca_system_score_codex":0.00012125543,"about_ca_system_score_gemma":0.0015313055,"threshold_uncertainty_score":0.57075036},"labels":[],"label_agreement":null},{"id":"W2127806652","doi":"10.1128/aac.46.4.1032-1037.2002","title":"Antifungal Activities of Posaconazole, Ravuconazole, and Voriconazole Compared to Those of Itraconazole and Amphotericin B against 239 Clinical Isolates of <i>Aspergillus</i> spp. and Other Filamentous Fungi: Report from SENTRY Antimicrobial Surveillance Program, 2000","year":2002,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":402,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Pfizer Pharmaceuticals; Strong; University of Louisville; University of Alberta; Bristol-Myers Squibb; University of Washington; Pfizer","keywords":"Posaconazole; Voriconazole; Microbiology; Amphotericin B; Aspergillus terreus; Itraconazole; Broth microdilution; Aspergillus flavus; Biology; Aspergillus versicolor; Aspergillus; Aspergillus fumigatus; Aspergillus niger; Fusarium; Rhizopus; Mucor; Antimicrobial; Minimum inhibitory concentration; Botany; Antifungal; Food science","score_opus":0.02644777505410591,"score_gpt":0.3006878265014094,"score_spread":0.2742400514473035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127806652","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99617416,0.0014801434,0.000037210495,0.00044815405,0.00012753614,0.0008216566,0.0006331799,0.00003406901,0.00024389503],"genre_scores_gemma":[0.98898154,0.007055486,0.0013454926,0.0020691436,0.00009482273,0.000004141084,0.00006213,0.000046623765,0.00034060152],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974312,0.00009843978,0.0011362638,0.00071491476,0.00022414516,0.00039500307],"domain_scores_gemma":[0.99853,0.00016765806,0.0005277585,0.0003968134,0.00014534597,0.00023242817],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00035587436,0.00040695645,0.0013474497,0.00011016882,0.000093022354,0.00004278197,0.000110950205,0.00023247286,0.00016394614],"category_scores_gemma":[0.00003193335,0.00036201588,0.00016150606,0.00018905995,0.00077104144,0.00013432124,0.00010751933,0.00021459849,0.000001243757],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012314522,0.0009027447,0.5937092,0.0003209033,0.00029331143,0.000032470172,0.0008927286,0.0000011554595,0.3838337,0.0000030252381,0.00455123,0.014228119],"study_design_scores_gemma":[0.005982284,0.0005013823,0.8629897,0.0005841145,0.00013278481,0.000108093365,0.00035782656,0.00035385753,0.12001758,0.000007851218,0.008486124,0.000478394],"about_ca_topic_score_codex":0.00047127024,"about_ca_topic_score_gemma":0.00007840401,"teacher_disagreement_score":0.26928055,"about_ca_system_score_codex":0.000019374236,"about_ca_system_score_gemma":0.000059927508,"threshold_uncertainty_score":0.9998832},"labels":[],"label_agreement":null},{"id":"W2127849742","doi":"10.1128/ec.00015-15","title":"Candida albicans Kinesin Kar3 Depends on a Cik1-Like Regulatory Partner Protein for Its Roles in Mating, Cell Morphogenesis, and Bipolar Spindle Formation","year":2015,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Kinesin; Biology; Cell biology; Microtubule; Mitosis; Spindle apparatus; Spindle pole body; Motor protein; Fungal protein; Regulator; Candida albicans; Morphogenesis; Antifungal drug; Kinetochore; Saccharomyces cerevisiae; Genetics; Yeast; Cell division; Cell; Gene","score_opus":0.028183328451768415,"score_gpt":0.2646299986986419,"score_spread":0.2364466702468735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127849742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935,0.002296528,0.0003789313,0.00024564788,0.00007835737,0.0013818697,0.000026227437,0.000044158223,0.0020482682],"genre_scores_gemma":[0.992296,0.0000356862,0.0009649345,0.0002232683,0.00009971109,0.000099340126,0.000068310124,0.000037253936,0.0061755343],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983163,0.00007763188,0.00043532034,0.00039834747,0.00037483737,0.00039754607],"domain_scores_gemma":[0.9990333,0.000055674678,0.0001496936,0.00037191683,0.00012825061,0.00026118112],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061939255,0.00024162988,0.00038006308,0.00015431199,0.00007933966,0.000027930362,0.00009195403,0.00015158464,0.000059145656],"category_scores_gemma":[0.000114249924,0.0002094041,0.000081951264,0.0001861431,0.000055620127,0.00016292524,0.000036744215,0.00016900331,0.000039482373],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004410528,0.002377028,0.7067134,0.0049618515,0.000057058805,0.00020262272,0.003938912,0.0002811416,0.25464678,0.00039890772,0.012465561,0.0095462315],"study_design_scores_gemma":[0.0094127385,0.0018360666,0.6411223,0.0006771083,0.00017379562,0.000032039567,0.0015133908,0.006036857,0.33097836,0.00023897996,0.007241385,0.00073703437],"about_ca_topic_score_codex":0.00013413448,"about_ca_topic_score_gemma":0.00079178927,"teacher_disagreement_score":0.07633158,"about_ca_system_score_codex":0.00019174874,"about_ca_system_score_gemma":0.00022302002,"threshold_uncertainty_score":0.8539251},"labels":[],"label_agreement":null},{"id":"W2128003379","doi":"10.1186/1471-2164-9-578","title":"A toolbox for epitope-tagging and genome-wide location analysis in Candida albicans","year":2008,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Computational biology; Genome; Tandem affinity purification; DNA microarray; Chromatin immunoprecipitation; Genetics; Gene; Gene expression; Biochemistry; Affinity chromatography; Promoter","score_opus":0.029993830756402474,"score_gpt":0.2710085726159633,"score_spread":0.24101474185956082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128003379","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9759004,0.00085546816,0.022218766,0.0001903369,0.000021625849,0.0004012997,0.000012792277,0.000014695726,0.00038459324],"genre_scores_gemma":[0.99215084,0.00033596894,0.0063016666,0.00034064596,0.000059814418,0.000023380746,0.000054695305,0.000012198693,0.0007207632],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99915314,0.000019654504,0.00025694998,0.00027690528,0.000086402666,0.00020692752],"domain_scores_gemma":[0.999407,0.00012455352,0.000057549467,0.00024778474,0.00007454728,0.00008855497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023151908,0.00009933952,0.00030970306,0.00015915943,0.000087519315,0.00000950623,0.000047970683,0.00006115707,0.000020277572],"category_scores_gemma":[0.00020512304,0.0000961774,0.00009191342,0.00034594242,0.0000682529,0.00004629532,0.000014466152,0.00007296333,0.000004071196],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022455413,0.000043651253,0.99489605,0.00009174887,0.00006997542,0.000006914969,0.0008328148,0.0004702418,0.0026211767,0.00004120946,0.000039704428,0.0006619361],"study_design_scores_gemma":[0.0007740334,0.000056116085,0.99176043,0.000010565796,0.00020369457,0.0000048901243,0.00042151287,0.0029004395,0.00025940206,0.000052195996,0.0034477822,0.00010895244],"about_ca_topic_score_codex":0.00034331947,"about_ca_topic_score_gemma":0.0070223645,"teacher_disagreement_score":0.016250445,"about_ca_system_score_codex":0.00019856496,"about_ca_system_score_gemma":0.00025515707,"threshold_uncertainty_score":0.39220005},"labels":[],"label_agreement":null},{"id":"W2128381931","doi":"10.1186/1476-511x-10-144","title":"In vitro cytotoxicity of two novel oral formulations of Amphotericin B (iCo-009 and iCo-010) against Candida albicans, human monocytic and kidney cell lines","year":2011,"lang":"en","type":"article","venue":"Lipids in Health and Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"British Columbia Institute of Technology; iCo Therapeutics (Canada); University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Cytotoxicity; Amphotericin B; Nephrotoxicity; Candida albicans; In vivo; Corpus albicans; Pharmacology; In vitro; Microbiology; Biology; Cytotoxic T cell; Kidney; Antifungal; Biochemistry","score_opus":0.04350528159362954,"score_gpt":0.3255834409376159,"score_spread":0.28207815934398633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128381931","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99791193,0.00085047784,0.00011957028,0.00021826621,0.000032633325,0.00049582816,0.00018055674,0.000007991448,0.00018273277],"genre_scores_gemma":[0.9966709,0.0003918333,0.0011695164,0.0016121421,0.000036789766,0.00001239379,0.000044424905,0.00000994064,0.00005206136],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987222,0.00006197043,0.00055481005,0.00027292848,0.00012646233,0.00026165193],"domain_scores_gemma":[0.9986047,0.00006550618,0.00014243917,0.00021983818,0.000044129254,0.0009233519],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002892247,0.00014221382,0.00045548944,0.00014870091,0.000070002105,0.0000049003215,0.000040055544,0.00005262427,0.000015879172],"category_scores_gemma":[0.00027634567,0.00012522501,0.000036445916,0.00016246135,0.00019955967,0.00010027201,0.000037897447,0.00014158546,1.4787965e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002078742,0.0006735935,0.96669286,0.0030841585,0.0000064886676,0.000008328654,0.0016037857,0.0000013937318,0.024927547,0.0002905097,0.00006669932,0.0005658674],"study_design_scores_gemma":[0.0057119927,0.00043214354,0.9876409,0.00042173464,0.000035229255,0.0000012709532,0.0004341488,0.0016944319,0.0025189023,0.0008902955,0.00005677566,0.00016217225],"about_ca_topic_score_codex":0.0053904722,"about_ca_topic_score_gemma":0.0008917905,"teacher_disagreement_score":0.022408646,"about_ca_system_score_codex":0.000054806518,"about_ca_system_score_gemma":0.0005097767,"threshold_uncertainty_score":0.81488174},"labels":[],"label_agreement":null},{"id":"W2128487112","doi":"10.1186/gb-2010-11-7-r71","title":"Experimental annotation of the human pathogen Candida albicans coding and noncoding transcribed regions using high-resolution tiling arrays","year":2010,"lang":"en","type":"article","venue":"Genome biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"ORFS; Biology; Genome; Tiling array; Gene; Genetics; Candida albicans; Computational biology; In silico; Transcriptome; Open reading frame; Gene expression","score_opus":0.03467771159908313,"score_gpt":0.3089656271621112,"score_spread":0.27428791556302806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128487112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971503,0.0002239298,0.0018693731,0.00013641483,0.00016337287,0.00023011275,0.00003760006,0.000013772031,0.00017512352],"genre_scores_gemma":[0.9988477,0.000011092687,0.00088849646,0.000054441774,0.00011260036,0.0000045184797,0.000042358228,0.000008351535,0.000030447276],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992881,0.000054203625,0.00021355717,0.00020676965,0.00006374276,0.00017365867],"domain_scores_gemma":[0.99958825,0.0000307235,0.000089589535,0.00019290247,0.0000482848,0.000050253773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019073371,0.000089429566,0.00019730616,0.00004630123,0.00023145945,0.0000046986015,0.00005837767,0.000108357155,0.000042502812],"category_scores_gemma":[0.00003278265,0.0000664339,0.00006004001,0.000077516794,0.0002708305,0.000032484266,0.000021727994,0.00016197495,5.0475205e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004313014,0.000028009488,0.03481147,0.0000194844,0.000014086704,0.000001082098,0.0008934754,0.0000031361571,0.96207446,0.0020041985,0.0000014976963,0.00010596943],"study_design_scores_gemma":[0.0023916007,0.00050771993,0.59614724,0.00010801586,0.00020426759,0.000065130356,0.0044456962,0.0008430056,0.393349,0.0008195709,0.0007823104,0.00033643324],"about_ca_topic_score_codex":0.00035129086,"about_ca_topic_score_gemma":0.0003035851,"teacher_disagreement_score":0.56872547,"about_ca_system_score_codex":0.000049001737,"about_ca_system_score_gemma":0.0000564685,"threshold_uncertainty_score":0.27090958},"labels":[],"label_agreement":null},{"id":"W2128546265","doi":"10.1086/340036","title":"Mucosal Candidiasis in Transgenic Mice Expressing Human Immunodeficiency Virus Type 1","year":2002,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Clinical Research Institute; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Canadian Institutes of Health Research","keywords":"Candida albicans; Biology; Immune system; Immunology; Immunodeficiency; Genetically modified mouse; Peripheral blood mononuclear cell; Virus; Microbiology; Virology; Pathology; Transgene; Medicine; Gene","score_opus":0.02306966759741982,"score_gpt":0.28484824257501734,"score_spread":0.26177857497759754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128546265","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9866288,0.011668681,0.00004106155,0.0001176562,0.00015056667,0.000100503195,0.0000039986458,0.000015839893,0.0012729069],"genre_scores_gemma":[0.99812645,0.0014703902,0.0000062541753,0.00014290397,0.00013320251,8.576681e-7,8.028091e-7,0.000012207711,0.00010694321],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989486,0.00013257263,0.00038274116,0.000082934035,0.0002595776,0.00019359612],"domain_scores_gemma":[0.9993,0.00011920399,0.00016221058,0.00018618161,0.00013684599,0.00009556705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002761401,0.000109903456,0.00026667846,0.00011926651,0.00015670154,0.00002310287,0.000113681635,0.000040793584,0.0004527745],"category_scores_gemma":[0.0001984157,0.00007003139,0.00015822143,0.0002706153,0.00011545832,0.00015823604,0.000011316028,0.0002671805,0.00001498005],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009820672,0.0018171788,0.7823662,0.0001454497,0.00013123649,0.00009471818,0.0024356085,0.00012765719,0.20524208,0.000026965536,0.0016252485,0.00500556],"study_design_scores_gemma":[0.002577181,0.0009834358,0.9898468,0.00034102495,0.00054523716,0.00025178964,0.00081589574,0.00008629359,0.0038117794,0.00029161337,0.00027248941,0.00017642582],"about_ca_topic_score_codex":0.00019709511,"about_ca_topic_score_gemma":0.00019727885,"teacher_disagreement_score":0.2074806,"about_ca_system_score_codex":0.00012187421,"about_ca_system_score_gemma":0.00007882248,"threshold_uncertainty_score":0.49575633},"labels":[],"label_agreement":null},{"id":"W2128670970","doi":"10.1128/iai.72.10.5868-5876.2004","title":"Dysregulated Inflammatory Response to<i>Candida albicans</i>in a C5-Deficient Mouse Strain","year":2004,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université Laval; Université du Québec; Institute for Biological Sciences; McGill University; Institut National de la Recherche Scientifique","funders":"","keywords":"Biology; Candida albicans; Congenic; Immunology; Microbiology; Corpus albicans; Complement component 5; Tumor necrosis factor alpha; Inflammation; Complement system; Immune system; Gene; Genetics","score_opus":0.010654614162693093,"score_gpt":0.26894824286307956,"score_spread":0.25829362870038647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128670970","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99793684,0.000058483,0.00023719486,0.00055959687,0.00006605751,0.00036028062,0.000010317169,0.00007850668,0.0006927343],"genre_scores_gemma":[0.9987198,0.000044442346,0.000055411834,0.00045874817,0.000015790061,0.000013098644,0.000010052253,0.000010873618,0.00067178265],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990317,0.00016024374,0.00025241222,0.00019255548,0.00015178422,0.00021126626],"domain_scores_gemma":[0.99937606,0.000053700158,0.000038957405,0.00030368305,0.00007681613,0.00015078181],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076150167,0.0001245169,0.0002021279,0.00019184823,0.00012912747,0.000022192375,0.000034232635,0.00009837987,0.000105044106],"category_scores_gemma":[0.0003611685,0.00011423235,0.00005462268,0.0003253937,0.000102309015,0.00008593554,0.000033387467,0.0002996633,0.00003110662],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0059476737,0.0007111982,0.3553401,0.0001049923,0.00003444984,0.000046539943,0.0024918385,0.00029458883,0.62887347,0.00026499285,0.00007863828,0.005811508],"study_design_scores_gemma":[0.0019216214,0.00043225507,0.9871573,0.00009378009,0.000010253271,0.000021482687,0.000309741,0.000015262414,0.0071561756,0.00010257562,0.0026608182,0.00011875968],"about_ca_topic_score_codex":0.0014442464,"about_ca_topic_score_gemma":0.0016298719,"teacher_disagreement_score":0.63181716,"about_ca_system_score_codex":0.00024423588,"about_ca_system_score_gemma":0.00016945209,"threshold_uncertainty_score":0.465826},"labels":[],"label_agreement":null},{"id":"W2128907894","doi":"10.1086/605931","title":"Impaired Interferon‐γ Responses, Increased Interleukin‐17 Expression, and a Tumor Necrosis Factor–α Transcriptional Program in Invasive Aspergillosis","year":2009,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Thomas Hospital","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; CGD Research Trust","keywords":"Immunology; Aspergillosis; Neutropenia; Calcineurin; Immunity; Tumor necrosis factor alpha; Biology; Interferon; Interleukin; Interferon gamma; Cytokine; Immune system; Medicine; Transplantation; Internal medicine; Chemotherapy","score_opus":0.01448201874376508,"score_gpt":0.2811929272682626,"score_spread":0.2667109085244975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128907894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99700016,0.0017306795,0.000039068353,0.0005879594,0.00005962578,0.000412946,0.00003200198,0.000040743143,0.000096836826],"genre_scores_gemma":[0.9985467,0.0004795799,0.000056045184,0.00074605894,0.0000937687,0.000009417735,0.0000045353786,0.000012834188,0.000051033516],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99836314,0.00032276742,0.00056874653,0.00016147326,0.00034475263,0.00023913088],"domain_scores_gemma":[0.99862665,0.0003779796,0.00025351727,0.00021472981,0.0002490477,0.0002780823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035922602,0.0002037473,0.00044927816,0.00022952678,0.00011534876,0.000046957128,0.0001302366,0.000058174606,0.00012936219],"category_scores_gemma":[0.000926708,0.00012477304,0.00022559793,0.00022504955,0.00019197875,0.00024950455,0.000021650292,0.00034926762,0.0000019143263],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013448393,0.001707714,0.8569531,0.00008405731,0.00009665045,0.00015570085,0.0010910168,0.000003876223,0.1213049,0.000015558358,0.00094912405,0.004189907],"study_design_scores_gemma":[0.0026864063,0.0035464973,0.9875822,0.0007634451,0.00020011338,0.00030671663,0.00048755857,0.000014655295,0.0036057727,0.00060662196,0.00007386078,0.00012616295],"about_ca_topic_score_codex":0.000074998716,"about_ca_topic_score_gemma":0.00016159171,"teacher_disagreement_score":0.13062909,"about_ca_system_score_codex":0.00019704147,"about_ca_system_score_gemma":0.00033421005,"threshold_uncertainty_score":0.5088097},"labels":[],"label_agreement":null},{"id":"W2128941915","doi":"10.1128/ec.5.1.192-202.2006","title":"<i>SST2</i>, a Regulator of G-Protein Signaling for the<i>Candida albicans</i>Mating Response Pathway","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"National Research Council Canada; Canadian Institutes of Health Research; Genomic Health","keywords":"Biology; Candida albicans; Saccharomyces cerevisiae; Fungal protein; Cell biology; Corpus albicans; Heterotrimeric G protein; Signal transduction; Regulation of gene expression; Response regulator; Gene expression; Mutant; Gene; G protein; Genetics","score_opus":0.010035143067640877,"score_gpt":0.2312163932459155,"score_spread":0.2211812501782746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128941915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990852,0.0012029473,0.0041746297,0.0005684128,0.000077661636,0.0010234958,0.000030831998,0.000046311405,0.0020237288],"genre_scores_gemma":[0.9863961,0.0000038640424,0.0031789076,0.00017293499,0.00018996847,0.00004280415,0.000013429082,0.000031598513,0.009970389],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984085,0.00009680827,0.0005156799,0.00030293158,0.00034026415,0.00033582893],"domain_scores_gemma":[0.99816304,0.0008809813,0.000197899,0.0005261375,0.00015377936,0.000078179546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011462297,0.00017490148,0.00036569952,0.00005226097,0.00015598047,0.000016160446,0.00013830958,0.00008564419,0.00017105747],"category_scores_gemma":[0.00033665897,0.00012471942,0.00024126204,0.00020481992,0.00015230277,0.000047209414,0.000031291624,0.00015485876,0.0000118032385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005066872,0.0003490513,0.045175888,0.0007336627,0.0000409643,0.000026965074,0.0003069263,0.00014356796,0.94459826,0.0005188385,0.0014770636,0.0015619501],"study_design_scores_gemma":[0.0033968869,0.0007749191,0.24864732,0.0005187763,0.0002045663,0.000011133712,0.00092933985,0.0016000285,0.73869646,0.0010465607,0.0038455215,0.00032847238],"about_ca_topic_score_codex":0.00019253975,"about_ca_topic_score_gemma":0.000048190665,"teacher_disagreement_score":0.20590177,"about_ca_system_score_codex":0.00006719533,"about_ca_system_score_gemma":0.00024813937,"threshold_uncertainty_score":0.508591},"labels":[],"label_agreement":null},{"id":"W2129113026","doi":"10.1093/infdis/jiq102","title":"The Y238X Stop Codon Polymorphism in the Human β-Glucan Receptor Dectin-1 and Susceptibility to Invasive Aspergillosis","year":2011,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Radboud Universitair Medisch Centrum; Leids Universitair Medisch Centrum","keywords":"Biology; Aspergillosis; Immunology; Hematopoietic stem cell transplantation; Loss of heterozygosity; Genotype; Immune system; Allele; Aspergillus; Odds ratio; Myeloid; Stem cell; Internal medicine; Genetics; Medicine; Gene","score_opus":0.024470305616878265,"score_gpt":0.27781921096823364,"score_spread":0.2533489053513554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129113026","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948852,0.0017644444,0.000017034687,0.0013614685,0.00016357868,0.00046804707,0.0000102281965,0.00001527037,0.0013146942],"genre_scores_gemma":[0.99777895,0.0008918359,0.000011454868,0.0009718668,0.00019875202,0.000008595077,0.0000010705344,0.00001539261,0.00012210743],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99803877,0.0005870843,0.0005089542,0.00016406532,0.0004158754,0.00028522353],"domain_scores_gemma":[0.9977962,0.000932624,0.00027029795,0.00050718174,0.00027414723,0.00021957283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001691291,0.00018251903,0.0003300814,0.000095929456,0.000553038,0.00004403925,0.0003057418,0.00005554839,0.00014934046],"category_scores_gemma":[0.0016172198,0.000081267055,0.00018038036,0.0003043983,0.0003997041,0.00011819199,0.00006634902,0.00041687072,0.000011416982],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001063344,0.00045000622,0.98443955,0.00003782858,0.00009590023,0.00002410744,0.004842617,0.0000013581747,0.0049989335,0.00023063745,0.0020005684,0.0018151355],"study_design_scores_gemma":[0.00080414384,0.0012408736,0.9890166,0.00012877196,0.00025378974,0.00011859436,0.005468158,7.096349e-7,0.0012217377,0.0013578228,0.00028686388,0.00010192738],"about_ca_topic_score_codex":0.00077660056,"about_ca_topic_score_gemma":0.004740551,"teacher_disagreement_score":0.004577044,"about_ca_system_score_codex":0.00016167203,"about_ca_system_score_gemma":0.00020533252,"threshold_uncertainty_score":0.4253577},"labels":[],"label_agreement":null},{"id":"W2129669660","doi":"10.2334/josnusd.52.177","title":"Candida spp. in periodontal disease: a brief review","year":2010,"lang":"en","type":"review","venue":"Journal of Oral Science","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Virulence; Microbiology; Immune system; Biofilm; Biology; Colonization; Candida albicans; Immunology; Disease; Periodontal disease; Bacteria; Medicine; Pathology; Dentistry","score_opus":0.048855110026813434,"score_gpt":0.4079531952544176,"score_spread":0.35909808522760417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129669660","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007055772,0.99758524,0.000003575934,0.0003751959,0.00033574962,0.00042039415,0.0000074667973,0.0000037744603,0.00056304596],"genre_scores_gemma":[0.0005478202,0.99825466,0.00030601062,0.00028765868,0.00015045084,0.0000031677127,0.000002012125,0.000011433524,0.0004367991],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972672,0.00007174718,0.000986743,0.00029788527,0.001032933,0.00034352354],"domain_scores_gemma":[0.99803406,0.00004396186,0.0006651362,0.00038273964,0.0002870061,0.000587088],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025985544,0.0002257061,0.0018686941,0.00023209385,0.00007648513,0.000047136742,0.00051752914,0.0000997431,0.00023855672],"category_scores_gemma":[0.0016037851,0.00013465113,0.0006153658,0.0010704388,0.0005622094,0.00028766555,0.00007154328,0.0011279483,0.000026649972],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042318083,0.00011838899,0.0065651583,0.023719374,0.000010273188,0.000894114,0.000013091491,1.3541394e-8,0.000009704146,0.000021204478,0.0016042223,0.96700215],"study_design_scores_gemma":[0.00016578569,0.00010476776,0.012223784,0.091269836,0.00038158012,0.00046595262,0.0000045734027,4.942987e-7,2.9072712e-7,0.000007705881,0.8952507,0.00012455652],"about_ca_topic_score_codex":0.000035744044,"about_ca_topic_score_gemma":0.00019276429,"teacher_disagreement_score":0.9668776,"about_ca_system_score_codex":0.00042032823,"about_ca_system_score_gemma":0.0057081277,"threshold_uncertainty_score":0.9999286},"labels":[],"label_agreement":null},{"id":"W2130568079","doi":"10.1128/iai.73.9.5493-5503.2005","title":"The <i>Aspergillus fumigatus</i> Siderophore Biosynthetic Gene <i>sidA</i> , Encoding <scp>l</scp> -Ornithine <i>N</i> <sup>5</sup> -Oxygenase, Is Required for Virulence","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":246,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Simon Fraser University; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; University of British Columbia; Wellcome Trust; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Aspergillus fumigatus; Siderophore; Biology; Microbiology; Virulence; Virology; Gene; Biochemistry","score_opus":0.019463490985077544,"score_gpt":0.2656907500786018,"score_spread":0.24622725909352428,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130568079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910252,0.0028353787,0.00047712243,0.00093259435,0.00018987017,0.00075296883,0.00007780869,0.00016236419,0.0035466629],"genre_scores_gemma":[0.9895784,0.0052059814,0.0003607949,0.0024862415,0.00030406684,0.00006065804,0.000043167227,0.000040315907,0.0019203387],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979904,0.00016357997,0.0005468217,0.00044373446,0.0003131673,0.0005422566],"domain_scores_gemma":[0.99769735,0.0008234216,0.00017165605,0.00074062584,0.00032955213,0.00023741537],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00096792384,0.0003300481,0.00041336383,0.000088385445,0.0013791131,0.00011935259,0.00014921681,0.00022173727,0.000042877622],"category_scores_gemma":[0.0013207308,0.00024225927,0.00025372588,0.00035765988,0.0004240111,0.00028895648,0.00010246037,0.00052123284,0.0000618275],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001098328,0.0012743177,0.08681853,0.0007410348,0.00051545596,0.00002220485,0.0068430323,0.00020947943,0.7823021,0.00073097623,0.03388424,0.08556032],"study_design_scores_gemma":[0.0038316576,0.0013006097,0.049844336,0.00033724922,0.00034025437,0.00025291,0.0025221638,0.0031107077,0.44127974,0.00072335196,0.49606928,0.00038772795],"about_ca_topic_score_codex":0.0002478474,"about_ca_topic_score_gemma":0.00014363228,"teacher_disagreement_score":0.46218506,"about_ca_system_score_codex":0.0001394817,"about_ca_system_score_gemma":0.00012653724,"threshold_uncertainty_score":0.99992096},"labels":[],"label_agreement":null},{"id":"W2131467671","doi":"10.1080/13693780500220415","title":"Emergence of disseminated candidiasis caused by<i>Candida krusei</i>during treatment with caspofungin: Case report and review of literature","year":2005,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôtel-Dieu de Québec; Hôpital Fleurimont; Centre Hospitalier Universitaire de Sherbrooke; Centre hospitalier universitaire de Québec","funders":"","keywords":"Caspofungin; Candida krusei; Flucytosine; Voriconazole; Amphotericin B; Internal medicine; Medicine; Biology; Microbiology; Antifungal; Fluconazole","score_opus":0.006903782364512709,"score_gpt":0.29010519496120374,"score_spread":0.283201412596691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131467671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9458744,0.05156207,0.000016978589,0.0017493477,0.000037453272,0.00037988898,0.000041488973,0.000015344283,0.0003230416],"genre_scores_gemma":[0.96682876,0.03192423,0.00014416593,0.00025737734,0.000047082147,0.000028587681,0.000053530435,0.000011599868,0.0007046951],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99845964,0.00007758155,0.0005647898,0.00032788652,0.00033029137,0.00023981353],"domain_scores_gemma":[0.99888325,0.00012836153,0.0001891055,0.00033575093,0.00016383729,0.00029972076],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00034006924,0.00016940606,0.0007344438,0.000055889694,0.00004145119,0.000001960463,0.00004951556,0.00016913936,0.0011228842],"category_scores_gemma":[0.0005462906,0.000107776934,0.00007155829,0.00029115766,0.0002821203,0.00004254053,0.000023805782,0.00017466406,0.0000010931157],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024675315,0.0024277621,0.49334309,0.027464993,0.0010068984,0.3647057,0.0031211604,3.8674935e-7,0.043660678,0.00006186693,0.01881795,0.04292198],"study_design_scores_gemma":[0.020350678,0.016767696,0.29745817,0.06975555,0.0045966674,0.38444227,0.0028149236,0.00019416791,0.1633573,0.000028376377,0.03856841,0.0016657762],"about_ca_topic_score_codex":0.00026184294,"about_ca_topic_score_gemma":0.0007271281,"teacher_disagreement_score":0.19588491,"about_ca_system_score_codex":0.00005628525,"about_ca_system_score_gemma":0.0002573826,"threshold_uncertainty_score":0.99979025},"labels":[],"label_agreement":null},{"id":"W2131508520","doi":"10.1091/mbc.02-05-0076","title":"Depletion of a Polo-like Kinase in<i>Candida albicans</i>Activates Cyclase-dependent Hyphal-like Growth","year":2003,"lang":"en","type":"article","venue":"Molecular Biology of the Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Stanford Bio-X","keywords":"Biology; Cell biology; Polo-like kinase; Cell cycle; Cell division; Hypha; Morphogenesis; Cell; Microbiology; Biochemistry; Gene","score_opus":0.006512088604795972,"score_gpt":0.24248187502391044,"score_spread":0.23596978641911448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131508520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99469185,0.00094567565,0.0007119205,0.00026790702,0.00013884113,0.00031867178,0.000013473191,0.000010415411,0.0029012721],"genre_scores_gemma":[0.9987855,0.0000776267,0.00032520486,0.00043285833,0.0000073663045,0.000008277716,0.000010688955,0.000015106012,0.00033735955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998687,0.00028553736,0.00033502255,0.0002909281,0.00015090962,0.00025057967],"domain_scores_gemma":[0.9991447,0.00007011586,0.00016510146,0.0004692864,0.00008908863,0.00006172769],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032178094,0.00015145371,0.00037265857,0.00008267707,0.000032226508,0.0000017454053,0.00015990464,0.00016878055,0.0000721695],"category_scores_gemma":[0.00020180347,0.00010679068,0.00018670752,0.00020250188,0.00032267676,0.000017156925,0.000047717665,0.00019611498,0.000005069168],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019481369,0.0002538078,0.23664036,0.00008868325,0.00002757748,0.000017939388,0.00005178782,0.0000042080624,0.7621835,0.00043264913,0.00005102291,0.00005365357],"study_design_scores_gemma":[0.0011967287,0.00025323295,0.048448794,0.00005302489,0.000054788517,0.000010849157,0.000113526046,0.0000062596955,0.9479617,0.0013810599,0.00042252638,0.00009751467],"about_ca_topic_score_codex":0.00036689642,"about_ca_topic_score_gemma":0.00011316423,"teacher_disagreement_score":0.18819158,"about_ca_system_score_codex":0.000054850036,"about_ca_system_score_gemma":0.00011376114,"threshold_uncertainty_score":0.43547973},"labels":[],"label_agreement":null},{"id":"W2131829756","doi":"10.1128/jcm.39.3.949-953.2001","title":"Prevalence and Antifungal Susceptibility of 442 <i>Candida</i> Isolates from Blood and Other Normally Sterile Sites: Results of a 2-Year (1996 to 1998) Multicenter Surveillance Study in Quebec, Canada","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":132,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Montreal General Hospital; Centre Hospitalier de l’Université de Montréal; Hôtel-Dieu de Québec; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Corpus albicans; Microbiology; Fluconazole; Candida tropicalis; Itraconazole; Biology; Candida parapsilosis; Amphotericin B; Candida albicans; Fungemia; Candida glabrata; Antifungal","score_opus":0.02477740161239752,"score_gpt":0.32225078082899883,"score_spread":0.29747337921660133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131829756","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978216,0.0010932207,0.000004211044,0.0002667874,0.00016029541,0.00037376583,0.00025708583,0.0000024807755,0.000020523876],"genre_scores_gemma":[0.99858725,0.0004927707,0.0003318975,0.00037963016,0.000087751636,7.5241473e-7,0.0000041417347,0.0000094634315,0.00010635218],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965512,0.0005388604,0.0021962724,0.00037572515,0.000104980594,0.00023293092],"domain_scores_gemma":[0.99676,0.0016332606,0.00080016884,0.00032081892,0.00030857397,0.0001771543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020727625,0.00016707926,0.0012314601,0.00007075903,0.000017925016,0.0000060118323,0.0001502612,0.00015200645,0.000032503984],"category_scores_gemma":[0.002246799,0.000121767676,0.0001086158,0.00012596846,0.00032142998,0.00006621157,0.00009238656,0.00037339312,7.140915e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012566829,0.00085817254,0.89501345,0.00013944783,0.00016941925,0.000052983025,0.00045511578,0.0000013458289,0.09025617,2.0240599e-7,0.0002437285,0.0002431514],"study_design_scores_gemma":[0.007071294,0.002320845,0.9878614,0.00034919797,0.000095969845,0.000028150394,0.0007015769,0.0000053978806,0.0010290939,0.000004432997,0.00043226496,0.0001003855],"about_ca_topic_score_codex":0.11249651,"about_ca_topic_score_gemma":0.9088144,"teacher_disagreement_score":0.7963179,"about_ca_system_score_codex":0.000039220784,"about_ca_system_score_gemma":0.00037969515,"threshold_uncertainty_score":0.8934134},"labels":[],"label_agreement":null},{"id":"W2132453639","doi":"10.1128/jcm.38.12.4569-4576.2000","title":"<i>Acrophialophora fusispora</i>Brain Abscess in a Child with Acute Lymphoblastic Leukemia: Review of Cases and Taxonomy","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Brain abscess; Itraconazole; Neutropenia; Abscess; Surgery; Amphotericin B; Radiology; Chemotherapy; Gastroenterology; Internal medicine; Antifungal; Dermatology","score_opus":0.029343330532863445,"score_gpt":0.33575667121182534,"score_spread":0.3064133406789619,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132453639","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981141,0.016020784,0.000014791145,0.002010193,0.000076073644,0.0002681808,0.000022912076,0.000003141728,0.00044297543],"genre_scores_gemma":[0.9500955,0.045401383,0.00069170794,0.0034938387,0.0001576658,0.000002511384,0.0000069501807,0.000010342292,0.00014013427],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975329,0.0002272751,0.0017323641,0.00023045365,0.00007121338,0.00020579853],"domain_scores_gemma":[0.99774957,0.0010077598,0.0006741847,0.00021370868,0.00020479658,0.00015001114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013199196,0.0001553834,0.0014734053,0.0000757372,0.000023819675,0.0000037301247,0.0001201494,0.00019862242,0.00037335922],"category_scores_gemma":[0.0009668741,0.000097341996,0.0002284151,0.00019306377,0.0005125113,0.000059694776,0.000021966825,0.00053577404,0.000007160392],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.05925426,0.0033497147,0.70335776,0.012380306,0.0020692379,0.02274433,0.00017679566,0.000012497592,0.032159925,0.000074713666,0.027726982,0.13669349],"study_design_scores_gemma":[0.025168318,0.015140957,0.6606525,0.049342524,0.0018683492,0.081694975,0.00019047633,0.000008209899,0.0012180546,0.00008265387,0.16394307,0.0006898779],"about_ca_topic_score_codex":0.000022588443,"about_ca_topic_score_gemma":0.0000585231,"teacher_disagreement_score":0.13621609,"about_ca_system_score_codex":0.000053286843,"about_ca_system_score_gemma":0.0006078224,"threshold_uncertainty_score":0.40880215},"labels":[],"label_agreement":null},{"id":"W2132524583","doi":"10.1086/340035","title":"Evidence for Differential Expression of<i>Candida albicans</i>Virulence Genes during Oral Infection in Intact and Human Immunodeficiency Virus Type 1–Transgenic Mice","year":2002,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Medical Research Council; Canadian Institutes of Health Research; Medical Research Council Canada; Pfizer","keywords":"Candida albicans; Biology; Virulence; Transgene; Genetically modified mouse; Gene; Gene expression; Microbiology; Corpus albicans; In vivo; Immunodeficiency; Virus; Virology; Mycosis; Immunology; Immune system; Genetics","score_opus":0.039142107005406,"score_gpt":0.3139259585357289,"score_spread":0.2747838515303229,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132524583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99057835,0.0087094335,0.0002730801,0.000027920709,0.00014040116,0.00023397653,0.0000061319206,0.000010544303,0.000020132507],"genre_scores_gemma":[0.9904089,0.00942992,0.000010604835,0.000017634473,0.00009188171,0.0000035533678,7.6172745e-7,0.000010325642,0.000026437381],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99898416,0.00009866117,0.0004245769,0.00011520708,0.00021781324,0.00015960954],"domain_scores_gemma":[0.99911195,0.00022527362,0.00025719177,0.00015617097,0.00017687932,0.000072541974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002367148,0.00012205374,0.00030370906,0.00012675808,0.00015998742,0.0000151340155,0.00008203914,0.000046042278,0.00011675837],"category_scores_gemma":[0.00029614402,0.0000796996,0.00013221828,0.00018362195,0.00013553757,0.00022920495,0.000023237737,0.0001690128,8.3195016e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010198121,0.00026751205,0.52134365,0.00019956283,0.00002133089,0.0000021301253,0.00019549922,0.00002700949,0.47615528,0.000004360015,0.000014371955,0.00074950117],"study_design_scores_gemma":[0.0014181843,0.0009408084,0.95373034,0.00085980305,0.00027876135,0.000052152533,0.0000575306,0.00004813866,0.04242002,0.00009670884,0.000010586972,0.00008697384],"about_ca_topic_score_codex":0.0003193694,"about_ca_topic_score_gemma":0.00023117992,"teacher_disagreement_score":0.43373525,"about_ca_system_score_codex":0.00007666182,"about_ca_system_score_gemma":0.000045444853,"threshold_uncertainty_score":0.32500553},"labels":[],"label_agreement":null},{"id":"W2133043140","doi":"10.1345/aph.1a015","title":"Amphotericin B Disposition after Aerosol Inhalation in Lung Transplant Recipients","year":2002,"lang":"en","type":"article","venue":"Annals of Pharmacotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; Vancouver Hospital and Health Sciences Centre; University of British Columbia","funders":"","keywords":"Amphotericin B; Medicine; Bronchoalveolar lavage; Inhalation; Lung; Adverse effect; Pharmacokinetics; Gastroenterology; Fluconazole; Internal medicine; Pharmacology; Anesthesia; Antifungal; Dermatology","score_opus":0.05251576809772192,"score_gpt":0.3541771552780223,"score_spread":0.3016613871803004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133043140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996341,0.0015211649,0.00022489607,0.0009421481,0.00007098428,0.00030196112,0.000022307237,0.000018233308,0.0005573349],"genre_scores_gemma":[0.99370456,0.004052223,0.00006129136,0.0017419152,0.000056754514,0.00002068194,0.000015201858,0.00001416944,0.0003332286],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990408,0.000054691438,0.00030672085,0.00019056191,0.00021487329,0.00019236469],"domain_scores_gemma":[0.999636,0.000023983152,0.000065124965,0.00014026636,0.00006491945,0.000069727124],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017080038,0.000111430665,0.00022138393,0.00009819585,0.000018717907,0.0000053734243,0.000044563076,0.000056913013,0.0014351526],"category_scores_gemma":[0.000005369451,0.000097793636,0.0001011389,0.00019375511,0.000042008618,0.00014288402,0.0000028755928,0.00010949867,0.000017085898],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019726004,0.0005175077,0.42301437,0.00009071729,0.000036518155,0.00003635739,0.0013537369,0.000005386989,0.5634494,0.000004787706,0.00095423695,0.008564399],"study_design_scores_gemma":[0.0019836442,0.00020315354,0.57372904,0.00031308524,0.000023549901,0.000004242127,0.000016598357,0.0019453394,0.42136666,0.000020070413,0.00026943974,0.00012518745],"about_ca_topic_score_codex":0.000034085417,"about_ca_topic_score_gemma":0.000018380879,"teacher_disagreement_score":0.15071467,"about_ca_system_score_codex":0.000022487835,"about_ca_system_score_gemma":0.000008201673,"threshold_uncertainty_score":0.9994777},"labels":[],"label_agreement":null},{"id":"W2133083377","doi":"10.1046/j.1365-2958.2002.03263.x","title":"Many of the genes required for mating in <i>Saccharomyces cerevisiae</i> are also required for mating in <i>Candida albicans</i>","year":2002,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":115,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; Biotechnology Research Institute","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Medical Research Council Canada","keywords":"Biology; Candida albicans; Saccharomyces cerevisiae; Mating type; Mating; Genetics; Gene; Mating of yeast; Corpus albicans; Microbiology","score_opus":0.023632933736240185,"score_gpt":0.26839659922404824,"score_spread":0.24476366548780806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133083377","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911214,0.0038939537,0.0013615061,0.0015633933,0.00010413911,0.0015420772,0.00011921115,0.000018966299,0.0002753513],"genre_scores_gemma":[0.99486023,0.00007702897,0.0034084395,0.0010956727,0.00004040323,0.00012764473,0.000042414682,0.00003394438,0.00031424122],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99809426,0.00015275182,0.00074345834,0.0004583911,0.00006929499,0.0004818252],"domain_scores_gemma":[0.99885124,0.00020453446,0.00033305224,0.0004632187,0.000105834995,0.000042112188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050356984,0.00021611262,0.0006775488,0.000094799,0.00007156668,0.00000957527,0.00023561338,0.00021094576,0.000049858812],"category_scores_gemma":[0.00037983753,0.00016747517,0.00025434417,0.00025572497,0.00017373398,0.000045837558,0.00007590165,0.00015145018,0.0000032257542],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018178919,0.00010166595,0.034472737,0.0006290461,0.000034436514,0.000013318732,0.0002400975,0.000012621853,0.96202624,0.00016465044,0.0005006251,0.0016227833],"study_design_scores_gemma":[0.00875009,0.0006450924,0.017725829,0.002381794,0.00019957124,0.00011503541,0.0020244087,0.0014239072,0.9530835,0.0008522133,0.012112491,0.000686067],"about_ca_topic_score_codex":0.000065253196,"about_ca_topic_score_gemma":0.00026356152,"teacher_disagreement_score":0.016746908,"about_ca_system_score_codex":0.00009276689,"about_ca_system_score_gemma":0.000041794447,"threshold_uncertainty_score":0.68294394},"labels":[],"label_agreement":null},{"id":"W2133225333","doi":"10.3324/haematol.2013.100263","title":"Understanding antifungal prophylaxis with posaconazole in hematology patients: an evolving bedside to bench story","year":2014,"lang":"en","type":"editorial","venue":"Haematologica","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Posaconazole; Hematology; Bench to bedside; Medicine; Antifungal; Intensive care medicine; Internal medicine; Medical physics; Voriconazole; Dermatology","score_opus":0.03588883364448356,"score_gpt":0.28773611860322,"score_spread":0.25184728495873643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133225333","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75153565,0.0007518324,0.0028340702,0.00052759104,0.2348383,0.003690782,0.00017089614,0.00042814927,0.005222695],"genre_scores_gemma":[0.9665237,0.000028302384,0.0011995265,0.00021864807,0.031062596,0.000097001684,0.0004904053,0.00009007034,0.00028974732],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9952341,0.00043352944,0.00078911247,0.0014277697,0.0011796965,0.0009358353],"domain_scores_gemma":[0.9966011,0.0009358756,0.00037051222,0.0010375769,0.000617137,0.00043778826],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00089723733,0.00067760964,0.002082247,0.0004922318,0.00025157398,0.00006961806,0.00040666942,0.0014823023,0.00023639906],"category_scores_gemma":[0.0030986792,0.00050810195,0.00016938508,0.00047288497,0.00031669685,0.00021730352,0.00015375594,0.0019187636,0.00008731352],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026817843,0.000971064,0.29597095,0.0017562783,0.00011712503,0.0011294706,0.0005881157,0.0000061868077,0.0000790736,0.00086219003,0.69558364,0.000254101],"study_design_scores_gemma":[0.034126148,0.079331614,0.46591055,0.022498237,0.0019086715,0.00069495913,0.011320611,0.00059822126,0.0014624535,0.005298511,0.36530298,0.011547036],"about_ca_topic_score_codex":0.00010305495,"about_ca_topic_score_gemma":0.0013730042,"teacher_disagreement_score":0.3302807,"about_ca_system_score_codex":0.0008737302,"about_ca_system_score_gemma":0.00068919087,"threshold_uncertainty_score":0.999814},"labels":[],"label_agreement":null},{"id":"W2133304104","doi":"10.1002/ccr3.372","title":"Imaging characteristics of disseminated<i>Geosmithia argillacea</i>causing severe diskospondylitis and meningoencephalomyelitis in a dog","year":2015,"lang":"en","type":"article","venue":"Clinical Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Magnetic resonance imaging; Differential diagnosis; Microbiology; Radiology; Pathology; Biology","score_opus":0.039764650774035404,"score_gpt":0.3697913171663114,"score_spread":0.330026666392276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133304104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996795,0.0007353063,0.0000703255,0.00027650103,0.00025051992,0.0002784438,0.000022216536,0.000033695662,0.0015379633],"genre_scores_gemma":[0.9986867,0.00015780005,0.00053339364,0.000113180744,0.0001206489,0.000005594362,0.000026651775,0.000021027232,0.00033503777],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99720055,0.00012451655,0.0015200635,0.00054034224,0.00031382983,0.00030067549],"domain_scores_gemma":[0.9979286,0.0003702728,0.00045288017,0.00050204573,0.00030759643,0.00043858693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002156753,0.00018293447,0.0007770414,0.00007571032,0.000043787753,0.000020760006,0.00002188074,0.00013748319,0.000034499175],"category_scores_gemma":[0.0038230086,0.00016048874,0.00013213673,0.00021985237,0.0003786518,0.00013410352,0.00009271436,0.00036859952,0.0000016565111],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016876643,0.00013120797,0.80546963,0.00013087766,0.000015188525,0.18120268,0.0002832097,1.4577988e-7,0.00010157946,0.000021034262,0.00017036556,0.012305329],"study_design_scores_gemma":[0.00088929234,0.00018072892,0.91152745,0.0006680259,0.00010503601,0.08404729,0.0008678806,0.00014278849,0.00009489691,0.00031700075,0.00096598663,0.00019363407],"about_ca_topic_score_codex":0.0002785185,"about_ca_topic_score_gemma":0.00005828262,"teacher_disagreement_score":0.106057815,"about_ca_system_score_codex":0.00008716641,"about_ca_system_score_gemma":0.00028052615,"threshold_uncertainty_score":0.6544541},"labels":[],"label_agreement":null},{"id":"W2133378648","doi":"10.1093/glycob/cwl085","title":"Structure and role of sialic acids on the surface of Aspergillus fumigatus conidiospores","year":2007,"lang":"en","type":"article","venue":"Glycobiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Aspergillus fumigatus; Sialic acid; Conidium; Biochemistry; Microbiology; Chemistry; Neuraminic acid; Lectin; Biology; Botany","score_opus":0.00838865084755587,"score_gpt":0.2519323339000403,"score_spread":0.24354368305248442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133378648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99629235,0.0010889219,0.000008963844,0.00021895074,0.000078228535,0.0001572177,0.0000361691,0.000008302049,0.0021108792],"genre_scores_gemma":[0.999503,0.00005452519,0.00009143443,0.00018527995,0.00004250331,2.9576788e-7,0.000010759821,0.0000055022565,0.00010667234],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993238,0.00004399621,0.00022077576,0.0001585131,0.00008206535,0.00017084871],"domain_scores_gemma":[0.99929285,0.00023983348,0.00008647577,0.00025930742,0.00007728012,0.00004425918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028328015,0.00008792065,0.0002979181,0.00002252701,0.000029833398,0.0000010753631,0.00006500302,0.00014718261,0.00015288644],"category_scores_gemma":[0.00017145682,0.00005137492,0.00005106628,0.00008113066,0.00046180544,0.000010196908,0.000025315141,0.0001462339,0.000002229324],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001151382,0.00003412993,0.37028483,0.00003865328,0.00004683027,0.00000585546,0.00025669346,0.0000014788268,0.6156181,0.011082541,0.00009308619,0.0013863734],"study_design_scores_gemma":[0.00045709804,0.0006181675,0.6565383,0.000025469913,0.00003014601,0.00001645454,0.0006068153,0.0000041284707,0.3385129,0.0014069962,0.0017311192,0.00005241112],"about_ca_topic_score_codex":0.000064071966,"about_ca_topic_score_gemma":0.000106946914,"teacher_disagreement_score":0.28625348,"about_ca_system_score_codex":0.000012965217,"about_ca_system_score_gemma":0.000040688647,"threshold_uncertainty_score":0.20950083},"labels":[],"label_agreement":null},{"id":"W2133519987","doi":"10.1128/aac.49.9.3646-3651.2005","title":"Inactivation of Sterol Δ <sup>5,6</sup> -Desaturase Attenuates Virulence in <i>Candida albicans</i>","year":2005,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Virulence; Ergosterol; Mutant; Biology; Candida albicans; Microbiology; Sterol; Wild type; Mutation; Corpus albicans; Gene; Genetics; Biochemistry; Cholesterol","score_opus":0.01074817854719228,"score_gpt":0.26170645873661796,"score_spread":0.2509582801894257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133519987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99600613,0.000048968413,0.000067889116,0.0031412411,0.000015729049,0.0002739791,0.00001433326,0.00001586358,0.0004158688],"genre_scores_gemma":[0.99054515,0.0009865172,0.00041811293,0.007471816,0.000075067124,0.0000031493698,0.00001819845,0.00001635415,0.00046562342],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990563,0.000025120102,0.0003007102,0.00027227952,0.00013666354,0.00020896358],"domain_scores_gemma":[0.999576,0.000028188935,0.0000862325,0.00019064444,0.00005472831,0.00006420989],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012886497,0.00015023546,0.00030975693,0.000072615156,0.0000419671,0.000014145462,0.000066881956,0.00009061419,0.00018350694],"category_scores_gemma":[0.000015752927,0.000125865,0.000064808475,0.00015914404,0.00012134538,0.00014914837,0.000016253396,0.0001321578,0.0000066877415],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001535461,0.0007473573,0.6611085,0.00022069205,0.000070751186,0.000012390258,0.0018426657,0.00003186281,0.26508692,0.00003412794,0.0070074294,0.06230184],"study_design_scores_gemma":[0.0054712794,0.00027017618,0.77679294,0.0004490691,0.000039176743,0.000016334017,0.0002970894,0.0010188535,0.19462383,0.000039957467,0.020693509,0.0002877773],"about_ca_topic_score_codex":0.00017557197,"about_ca_topic_score_gemma":0.00006048109,"teacher_disagreement_score":0.11568444,"about_ca_system_score_codex":0.00004802768,"about_ca_system_score_gemma":0.00003905517,"threshold_uncertainty_score":0.51326257},"labels":[],"label_agreement":null},{"id":"W2133768317","doi":"10.1139/w06-040","title":"In vitro susceptibility of isolates of<i>Sporothrix schenckii</i>to amphotericin B, itraconazole, and terbinafine: comparison of yeast and mycelial forms","year":2006,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Terbinafine; Sporothrix schenckii; Itraconazole; Amphotericin B; Microbiology; Mycelium; Sporothrix; Biology; Yeast; Sporotrichosis; Serial dilution; Dimorphic fungus; Antifungal; Medicine; Botany; Immunology; Biochemistry; Pathology","score_opus":0.00884802802260994,"score_gpt":0.2541795503982528,"score_spread":0.24533152237564285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133768317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99663126,0.0026045556,0.000040714644,0.00028209895,0.0000731563,0.00017066517,0.00013485203,9.4355653e-7,0.00006174036],"genre_scores_gemma":[0.99909055,0.000026996044,0.0007155049,0.00007837599,0.00003279917,4.429329e-7,0.000009576764,0.0000073521505,0.00003838857],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99866736,0.000049201448,0.00084182556,0.0001567719,0.00004195045,0.00024288094],"domain_scores_gemma":[0.9990305,0.000059086968,0.0003446596,0.00014394813,0.0002191904,0.00020263212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040429778,0.00012372856,0.00080177287,0.000276528,0.000021253523,0.0000030942467,0.00008774582,0.0001385702,0.000049859605],"category_scores_gemma":[0.00011124814,0.00010181305,0.00008148895,0.00014839575,0.0004725766,0.00005813269,0.000015523077,0.00020617589,6.082779e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005283068,0.000048069032,0.40414727,0.000112327936,0.000013933603,0.000011632215,0.00026805748,0.0000021784456,0.59426105,0.000016488253,0.00021453445,0.00037613983],"study_design_scores_gemma":[0.0013161318,0.0007532962,0.6726262,0.00017088345,0.00003819183,0.00014603867,0.00047511456,0.0000062104014,0.3236863,0.000092443246,0.000604685,0.000084536165],"about_ca_topic_score_codex":0.009543334,"about_ca_topic_score_gemma":0.05978182,"teacher_disagreement_score":0.27057475,"about_ca_system_score_codex":0.000068813744,"about_ca_system_score_gemma":0.00047422206,"threshold_uncertainty_score":0.9970522},"labels":[],"label_agreement":null},{"id":"W2134082256","doi":"10.1016/j.oooo.2014.07.050","title":"Mucormycosis in Hematopoietic Stem Cell Transplant Patients; A Case Report and Review of Literature","year":2015,"lang":"en","type":"article","venue":"Oral Surgery Oral Medicine Oral Pathology and Oral Radiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Mucormycosis; Medicine; Incidence (geometry); Malignancy; Hematopoietic stem cell transplantation; Hematologic malignancy; Myeloid leukemia; Dermatology; Surgery; Aspergillosis; Transplantation; Pathology; Internal medicine; Immunology","score_opus":0.03278489060611174,"score_gpt":0.2908534814040509,"score_spread":0.25806859079793915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134082256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9292971,0.06749411,0.000029228186,0.002019304,0.00037277088,0.0005554668,0.000038912283,0.000034429428,0.00015868107],"genre_scores_gemma":[0.9818424,0.015156254,0.00027218193,0.002180472,0.00006144642,0.000026778876,0.00024296797,0.000026569409,0.00019091187],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99623054,0.00078510196,0.0013793949,0.00076026324,0.00027402738,0.0005706952],"domain_scores_gemma":[0.99798286,0.00040094362,0.00036605418,0.00046276973,0.00030685027,0.00048053163],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0030523252,0.00042735582,0.0024139907,0.00031154873,0.00006417823,0.0000054047932,0.00008126443,0.00047208,0.00007327926],"category_scores_gemma":[0.00062115013,0.00029681125,0.0001562783,0.0005519928,0.0010256813,0.0001594595,0.00005712532,0.0005984471,0.0000041534877],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011680687,0.0002567483,0.84588164,0.003746517,0.000030498924,0.13332596,0.00096691324,1.1444093e-7,0.0002351943,0.000055735076,0.005157885,0.009174734],"study_design_scores_gemma":[0.010751654,0.0067711105,0.49538866,0.017349778,0.0012933707,0.45753807,0.0017560303,0.00004599922,0.00044032396,0.0009929347,0.0063927034,0.0012793734],"about_ca_topic_score_codex":0.00025370947,"about_ca_topic_score_gemma":0.00024432509,"teacher_disagreement_score":0.35049295,"about_ca_system_score_codex":0.000064577995,"about_ca_system_score_gemma":0.00018373567,"threshold_uncertainty_score":0.9999484},"labels":[],"label_agreement":null},{"id":"W2134298953","doi":"10.1091/mbc.e08-11-1093","title":"Genome-wide Mapping of the Coactivator Ada2p Yields Insight into the Functional Roles of SAGA/ADA Complex in<i>Candida albicans</i>","year":2009,"lang":"en","type":"article","venue":"Molecular Biology of the Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Promoter; Coactivator; Genetics; Chromatin immunoprecipitation; Gene; Histone; Genome; Chromatin; Candida albicans; Acetyltransferase; Acetylation; Transcription factor; Gene expression","score_opus":0.015488189880045767,"score_gpt":0.2368156338059572,"score_spread":0.22132744392591142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134298953","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99145293,0.0013180871,0.0007751613,0.0030171485,0.0000701694,0.00031355408,0.000009095483,0.000004235934,0.0030396061],"genre_scores_gemma":[0.99800724,0.00004412887,0.00012898918,0.0015739292,0.000019861292,0.0000032101948,0.000009567705,0.000006540317,0.00020652646],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988751,0.00021179361,0.00037165647,0.00019332654,0.00018202628,0.0001661069],"domain_scores_gemma":[0.99892926,0.00013674435,0.00022870014,0.0005841367,0.00009162614,0.0000295184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002754432,0.00012627216,0.00033989034,0.0000432456,0.00006827835,0.0000016375167,0.0003262703,0.00012337742,0.00006139129],"category_scores_gemma":[0.00014203708,0.00006303478,0.00022043534,0.00025277922,0.00055822154,0.000013000691,0.00009903939,0.00024292838,9.4799987e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018795488,0.0001140684,0.15143025,0.00004727053,0.00004106281,0.0000012790526,0.00048610583,0.00003986852,0.8471094,0.00021616033,0.000096949465,0.00022966122],"study_design_scores_gemma":[0.00046082036,0.00012660089,0.6300788,0.00006173594,0.00003567917,0.0000016826632,0.00027742982,0.000016506467,0.36495548,0.0010867498,0.0028434694,0.00005504088],"about_ca_topic_score_codex":0.00014973026,"about_ca_topic_score_gemma":0.00018064467,"teacher_disagreement_score":0.4821539,"about_ca_system_score_codex":0.000039780727,"about_ca_system_score_gemma":0.00014100304,"threshold_uncertainty_score":0.25704837},"labels":[],"label_agreement":null},{"id":"W2134442883","doi":"10.1177/0748233709348394","title":"Mold remediation in a hospital","year":2009,"lang":"en","type":"article","venue":"Toxicology and Industrial Health","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"U.S. Environmental Protection Agency","keywords":"Medicine; Infection control; Infectious disease (medical specialty); Disease; Medical emergency; Intensive care medicine; Guideline; Compromise; Environmental health; Emergency medicine; Pathology","score_opus":0.04554526567996726,"score_gpt":0.33843953725114867,"score_spread":0.2928942715711814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134442883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96825475,0.00027407246,0.000009194288,0.029881952,0.00016329442,0.00039383429,0.000002040763,0.000019303128,0.00100158],"genre_scores_gemma":[0.9962679,0.00019539769,0.00006007749,0.0029780343,0.00025542753,0.0000032249948,0.000010271181,0.000002469157,0.00022717984],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99923503,0.00007230982,0.00023515901,0.00017332818,0.00006449198,0.00021967725],"domain_scores_gemma":[0.9996639,0.00004181318,0.000055721597,0.00009432544,0.000016318576,0.00012792322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044936076,0.000064526386,0.00024186776,0.00006517876,0.000050081828,0.000003226765,0.000021241754,0.00022498907,0.000048933463],"category_scores_gemma":[0.00024094974,0.000056846606,0.000020491581,0.00013087601,0.000049704136,0.000048367096,0.0000057091274,0.0003316329,0.0000062987424],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019978557,0.0013092614,0.6792695,0.000043789532,0.00001164972,0.000059889888,0.0010218704,9.2463756e-7,0.0010244267,0.005242102,0.019100176,0.29091856],"study_design_scores_gemma":[0.0027946027,0.0052302317,0.98832315,0.00004918087,0.0000054191637,0.000006834006,0.00015784889,0.000031946365,0.00014460177,0.0008498478,0.0023400246,0.00006628687],"about_ca_topic_score_codex":0.000055276327,"about_ca_topic_score_gemma":0.00013899099,"teacher_disagreement_score":0.3090537,"about_ca_system_score_codex":0.00010730418,"about_ca_system_score_gemma":0.00031951765,"threshold_uncertainty_score":0.23181373},"labels":[],"label_agreement":null},{"id":"W2135005927","doi":"10.2217/fmb.10.73","title":"Report from the 4th Advances Against Aspergillosis Conference","year":2010,"lang":"en","type":"article","venue":"Future Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Medicine; Intensive care medicine; Aspergillosis; Hematopoietic stem cell transplantation; Incidence (geometry); Neutropenia; Transplantation; Disease; Malignancy; Lung transplantation; Intensive care unit; Population; Immunology; Chemotherapy; Internal medicine; Environmental health","score_opus":0.008226604176828403,"score_gpt":0.25667170492830177,"score_spread":0.24844510075147336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135005927","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97969925,0.0019790854,0.00006223418,0.007385974,0.0018627477,0.00021049776,0.00009969004,0.00005379661,0.008646739],"genre_scores_gemma":[0.9918879,0.00029030253,0.0008595183,0.003563508,0.0014933714,0.000007868078,0.0004122056,0.000010894691,0.0014744278],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99902976,0.000049844253,0.00024759653,0.00038157962,0.00005178826,0.00023942575],"domain_scores_gemma":[0.99895006,0.00011208856,0.00010142228,0.00062802545,0.00014155648,0.00006683927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019087677,0.00014973238,0.0002893841,0.000016046153,0.00012204925,0.00001150436,0.00017928619,0.00024047469,0.00080671604],"category_scores_gemma":[0.00017696636,0.00008392068,0.00011399312,0.000080327285,0.0003566117,0.000043261593,0.000048930477,0.00055820163,0.00011326857],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010901119,0.000042275264,0.17717643,0.000008542838,0.000039030987,0.000099277844,0.0001210085,5.1918843e-8,0.7991146,0.0002702942,0.018505286,0.004514221],"study_design_scores_gemma":[0.00033854923,0.000051185987,0.15486696,0.00001871758,0.000041268282,0.00018271222,0.00032808498,0.000001036408,0.018277561,0.00015231219,0.8256257,0.00011588038],"about_ca_topic_score_codex":0.000050920906,"about_ca_topic_score_gemma":0.0018792107,"teacher_disagreement_score":0.80712044,"about_ca_system_score_codex":0.000016019578,"about_ca_system_score_gemma":0.00012160534,"threshold_uncertainty_score":0.8832975},"labels":[],"label_agreement":null},{"id":"W2135123460","doi":"10.1086/589298","title":"Molecular Epidemiology of Candidemia: Evidence of Clusters of Smoldering Nosocomial Infections","year":2008,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":120,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Háskóli Íslands; Landspítali Háskólasjúkrahús; McMaster University; Genome Canada","keywords":"Candida parapsilosis; Candida tropicalis; Epidemiology; Molecular epidemiology; Genotype; Candida dubliniensis; Microbiology; Candida albicans; Candida glabrata; Medicine; Population; Corpus albicans; Polymerase chain reaction; Biology; Internal medicine; Genetics; Gene","score_opus":0.11609455166792701,"score_gpt":0.4276985012183881,"score_spread":0.3116039495504611,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135123460","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948924,0.0022273108,0.0019472232,0.00012552027,0.00020288338,0.00029981695,0.000018956855,0.00003541595,0.00025045194],"genre_scores_gemma":[0.99818426,0.0013704061,0.00006167276,0.00025445837,0.00007904633,0.000011497948,0.0000051781253,0.000011897705,0.000021551308],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975932,0.00038437996,0.0013629087,0.00029316096,0.00016471936,0.00020158206],"domain_scores_gemma":[0.9945646,0.0039208466,0.00052183395,0.00045689463,0.00031750876,0.0002183503],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.000631239,0.00013369639,0.0010781146,0.00008991137,0.00005225966,5.1543293e-7,0.00008407767,0.00019375043,0.000059138216],"category_scores_gemma":[0.017442008,0.000116476986,0.0006451727,0.00024348768,0.0012517992,0.00006605913,0.00006736307,0.00026058656,0.0000031677314],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029460993,0.00090711616,0.99617106,0.0005207746,0.00014647817,0.00001832206,0.000035125962,0.00021511575,0.0009083028,0.000120954835,0.0002391936,0.00042293267],"study_design_scores_gemma":[0.000940486,0.0014426234,0.9952724,0.00048723814,0.0002987921,0.000011513708,0.000024829373,0.00010305325,0.0009463225,0.0003708758,0.000017014689,0.00008483503],"about_ca_topic_score_codex":0.00028796913,"about_ca_topic_score_gemma":0.000082663406,"teacher_disagreement_score":0.01681077,"about_ca_system_score_codex":0.000044234133,"about_ca_system_score_gemma":0.0003919939,"threshold_uncertainty_score":0.9908345},"labels":[],"label_agreement":null},{"id":"W2135315031","doi":"10.1128/aac.00606-10","title":"Impact of <i>cyp51A</i> Mutations on the Pharmacokinetic and Pharmacodynamic Properties of Voriconazole in a Murine Model of Disseminated Aspergillosis","year":2010,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Voriconazole; Pharmacokinetics; Aspergillus fumigatus; Aspergillosis; Pharmacodynamics; Liter; Pharmacology; Medicine; Posaconazole; Microbiology; Area under the curve; Biology; Internal medicine; Immunology; Antifungal","score_opus":0.018572738580217976,"score_gpt":0.2968357802960426,"score_spread":0.2782630417158246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135315031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989179,0.000037046175,0.000007274816,0.00052918936,0.000017027458,0.00029614833,0.00004437132,0.000004646859,0.0001463944],"genre_scores_gemma":[0.99875104,0.0007977064,0.00005070837,0.0002530267,0.000008904077,0.0000034106508,0.0000056215404,0.000012181868,0.00011740466],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993595,0.000016639242,0.0002670453,0.00014541087,0.00009641921,0.00011499465],"domain_scores_gemma":[0.9996227,0.000026071251,0.00010438567,0.00013075887,0.000078820405,0.000037277678],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010773431,0.00011780518,0.00027789685,0.00006408551,0.00002697597,0.0000035177318,0.00005858143,0.000044792174,0.00007084135],"category_scores_gemma":[0.000015637423,0.00007007234,0.00008138786,0.00013023453,0.0002499292,0.000036679387,0.000014692945,0.00013193571,2.1559819e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005976741,0.00048125078,0.14267232,0.00014172462,0.00007299745,7.394211e-7,0.0005650386,0.00003824472,0.8536013,0.000017186103,0.00015070039,0.0016608422],"study_design_scores_gemma":[0.0019225066,0.00016306297,0.3562849,0.00016878964,0.00005371709,0.0000032609923,0.000049946168,0.010186938,0.6310599,0.00002104628,0.000009532984,0.00007645713],"about_ca_topic_score_codex":0.0001547683,"about_ca_topic_score_gemma":0.000020560376,"teacher_disagreement_score":0.22254142,"about_ca_system_score_codex":0.000008830457,"about_ca_system_score_gemma":0.00004055363,"threshold_uncertainty_score":0.28574672},"labels":[],"label_agreement":null},{"id":"W2135466185","doi":"10.1128/aac.49.1.241-248.2005","title":"Desketoneoenactin-Siderophore Conjugates for <i>Candida</i> : Evidence of Iron Transport-Dependent Species Selectivity","year":2004,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Siderophore; Ferrichrome; Conjugate; Biology; Biochemistry; Microbiology; Candida albicans; ATP-binding cassette transporter; Transporter; Chemistry; Escherichia coli; Bacterial outer membrane","score_opus":0.027483888396751265,"score_gpt":0.2877943674132011,"score_spread":0.2603104790164498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135466185","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99517995,0.0002043129,0.0011574687,0.0025641075,0.00006436518,0.00060901,0.00003154111,0.000027745858,0.0001614897],"genre_scores_gemma":[0.9929356,0.0032057117,0.0007423136,0.002415448,0.0000775402,0.0000068860136,0.00001133077,0.000024935665,0.0005802572],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99890244,0.0000135272885,0.00029583383,0.00035521563,0.00016591468,0.00026706213],"domain_scores_gemma":[0.9994188,0.00005545204,0.00011359111,0.00020166537,0.00011802192,0.00009245142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017334927,0.00019249595,0.00042924113,0.000039843922,0.00010973138,0.0000142733115,0.00007163332,0.0000996716,0.00008092138],"category_scores_gemma":[0.000025146675,0.00015812718,0.0001581387,0.000095181415,0.00019834132,0.00011079197,0.0000092941755,0.00010876966,0.0000017898631],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029900623,0.0005037318,0.30690116,0.0007834916,0.00010287339,0.000013991655,0.00086056057,0.000007182372,0.68432075,0.00007605591,0.0014576326,0.0019824875],"study_design_scores_gemma":[0.0036014186,0.00065519405,0.36782703,0.00050317904,0.00009704652,0.000023580928,0.00014543293,0.0000044611834,0.6253026,0.0001636035,0.0014800486,0.00019638598],"about_ca_topic_score_codex":0.00020013498,"about_ca_topic_score_gemma":0.0001886862,"teacher_disagreement_score":0.06092586,"about_ca_system_score_codex":0.000059169757,"about_ca_system_score_gemma":0.00011954943,"threshold_uncertainty_score":0.6448239},"labels":[],"label_agreement":null},{"id":"W2135733303","doi":"10.1086/509116","title":"Clinical Research in the Lay Press: Irresponsible Journalism Raises a Huge Dose of Doubt","year":2006,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Hamilton Health Sciences; Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"","keywords":"Medicine; Journalism; Library science; Media studies; Sociology; Computer science","score_opus":0.18205720825894323,"score_gpt":0.5052778986156435,"score_spread":0.3232206903567003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135733303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843061,0.0035703268,0.000022593435,0.0012711516,0.00030155655,0.0006976915,0.000036638718,0.000053744698,0.009740206],"genre_scores_gemma":[0.99607134,0.0015680239,0.00001916468,0.0006035613,0.0010057125,0.000040230378,0.000016180631,0.000020256322,0.0006555038],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9938997,0.0026205915,0.0017032797,0.0005127624,0.0007946252,0.00046904274],"domain_scores_gemma":[0.9890066,0.009116132,0.00024884773,0.0008988927,0.00046493442,0.0002646111],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0072500035,0.00017646668,0.00080856826,0.00016133256,0.00016343617,0.000054813652,0.00029338463,0.0002564303,0.00015546168],"category_scores_gemma":[0.007087677,0.00011216139,0.000670237,0.0004968807,0.0014313249,0.000120137025,0.00010613718,0.0011906542,0.000048654503],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014267253,0.0053169937,0.9656379,0.00013756331,0.00005034128,0.00018450695,0.00003293071,0.000006725381,0.000033472286,0.0011807203,0.022669446,0.0033226807],"study_design_scores_gemma":[0.0030701205,0.0010533947,0.97311056,0.00024903662,0.00012793334,0.000009563524,0.000108684675,0.000023786315,0.00001797896,0.005671688,0.016446091,0.00011117529],"about_ca_topic_score_codex":0.00041867822,"about_ca_topic_score_gemma":0.0005442971,"teacher_disagreement_score":0.011765276,"about_ca_system_score_codex":0.00004895322,"about_ca_system_score_gemma":0.0005576789,"threshold_uncertainty_score":0.84851235},"labels":[],"label_agreement":null},{"id":"W2135952845","doi":"10.3129/i09-026","title":"Successful treatment of choroidal blastomycosis with oral administration of voriconazole","year":2009,"lang":"en","type":"letter","venue":"Canadian Journal of Ophthalmology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Voriconazole; Medicine; Blastomycosis; Administration (probate law); Dermatology; Oral administration; Antifungal; Pharmacology","score_opus":0.02741581509533315,"score_gpt":0.2902191669274164,"score_spread":0.26280335183208325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135952845","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95984167,0.0010495505,0.000010728683,0.03359036,0.00020978993,0.00023298078,0.00010881488,0.0000015127922,0.004954589],"genre_scores_gemma":[0.9951414,0.000022878638,0.00033372745,0.0021322423,0.0005886847,0.0000020483947,0.000066231216,0.00002319802,0.001689631],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982837,0.000106052525,0.0007593594,0.0002091941,0.0002842782,0.00035743765],"domain_scores_gemma":[0.99783325,0.0000855465,0.000820244,0.00031430201,0.00060948904,0.00033717242],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014721499,0.00026263538,0.0011852531,0.0004236108,0.000036537884,0.000008115479,0.00016682532,0.00053089147,0.0009308278],"category_scores_gemma":[0.00006646145,0.00019570474,0.0002893901,0.00018016335,0.00033536842,0.0000634998,0.000002623101,0.0005295548,0.0000027948497],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028233265,0.00040900204,0.69798636,0.0005680482,0.0010570403,0.22634642,0.0003118331,0.000009769058,0.00040967905,0.00002022066,0.06810644,0.0019518536],"study_design_scores_gemma":[0.004708081,0.056004632,0.6056847,0.0008959437,0.0017569315,0.27170974,0.0002931527,0.0000046195014,0.0057074213,0.00018909211,0.052489888,0.00055579183],"about_ca_topic_score_codex":0.0027070795,"about_ca_topic_score_gemma":0.0012985629,"teacher_disagreement_score":0.09230165,"about_ca_system_score_codex":0.0003898556,"about_ca_system_score_gemma":0.005173126,"threshold_uncertainty_score":0.9999825},"labels":[],"label_agreement":null},{"id":"W2136386785","doi":"10.1148/radiol.2361031772","title":"Pulmonary Candidiasis after Hematopoietic Stem Cell Transplantation: Thin-Section CT Findings","year":2005,"lang":"en","type":"article","venue":"Radiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Hospital and Health Sciences Centre; University of British Columbia","funders":"","keywords":"Medicine; Hematopoietic stem cell transplantation; Lung; Institutional review board; Pleural effusion; Biopsy; Radiology; Transplantation; Pathology; Surgery; Internal medicine","score_opus":0.010329231130775593,"score_gpt":0.24104435821481385,"score_spread":0.23071512708403824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136386785","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908661,0.0014307691,0.0003645883,0.00079290743,0.00020372329,0.00019727925,0.000009244695,0.00006135005,0.006073996],"genre_scores_gemma":[0.9956714,0.00048122433,0.00016668643,0.0006320115,0.00034011566,0.000027100292,0.00002731098,0.000014251019,0.002639909],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990436,0.00006409293,0.00023725796,0.00028950395,0.000115962706,0.00024961148],"domain_scores_gemma":[0.9995528,0.00007489149,0.000034883305,0.0002101272,0.000030038242,0.000097245844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016699199,0.00012833228,0.00027449484,0.000066900786,0.000066877896,0.000007252816,0.000051195955,0.00010347939,0.00054938626],"category_scores_gemma":[0.0000052156406,0.00010901773,0.00011074277,0.000102193786,0.00008338466,0.000097035336,0.0000061014543,0.00020165453,0.00014287586],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027805187,0.00040229605,0.94325143,0.0009798236,0.00009431437,0.0021589424,0.004030381,0.000041702082,0.031323515,0.00021098931,0.003474926,0.011251186],"study_design_scores_gemma":[0.0013422169,0.0003510884,0.9653837,0.00008973092,0.00023279623,0.005647508,0.00065780676,0.00026063307,0.015930556,0.000082216284,0.009717444,0.00030431515],"about_ca_topic_score_codex":0.000027552227,"about_ca_topic_score_gemma":0.00006224302,"teacher_disagreement_score":0.022132283,"about_ca_system_score_codex":0.000114486145,"about_ca_system_score_gemma":0.000060408733,"threshold_uncertainty_score":0.60153943},"labels":[],"label_agreement":null},{"id":"W2136601028","doi":"10.1128/ec.00109-10","title":"Spitzenkörper, Exocyst, and Polarisome Components in Candida albicans Hyphae Show Different Patterns of Localization and Have Distinct Dynamic Properties","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; University of Sheffield; Wellcome Trust","keywords":"Exocyst; Fluorescence recovery after photobleaching; Cell biology; Biology; Vesicle; Candida albicans; Secretory Vesicle; Exocytosis; Biophysics; Secretion; Microbiology; Biochemistry; Membrane","score_opus":0.01468724940605614,"score_gpt":0.23028329703519096,"score_spread":0.2155960476291348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136601028","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983079,0.00043674512,0.00043532992,0.00011949036,0.00008984095,0.0003832828,0.00002644005,0.000014327854,0.00018665768],"genre_scores_gemma":[0.99899507,0.00011103654,0.00003702973,0.0000477288,0.00002129668,0.0000056717595,0.00004754309,0.000017177303,0.0007174243],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99895674,0.000039577844,0.00030053564,0.00029068213,0.00020583048,0.00020662119],"domain_scores_gemma":[0.99947244,0.00004174349,0.00007294668,0.0002439392,0.000041363273,0.00012755148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011566379,0.00016526575,0.00036047128,0.00007908218,0.000047264697,0.000015184076,0.000055315697,0.00008884019,0.000079531485],"category_scores_gemma":[0.000051485164,0.00012331434,0.000035425284,0.00005014431,0.00017524371,0.000057215857,0.000060669467,0.0002364273,0.0000014782787],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016667448,0.000278401,0.952474,0.0005423807,0.000009447445,0.000016727581,0.0004926416,0.0000011294196,0.045198258,0.0000075827807,0.0000058640744,0.00080691377],"study_design_scores_gemma":[0.0012925118,0.00016431243,0.9893398,0.00017652399,0.00004659841,0.000011001654,0.00033780394,0.0053624082,0.0031050777,0.00002400161,0.000016499589,0.00012342822],"about_ca_topic_score_codex":0.0015283757,"about_ca_topic_score_gemma":0.009447101,"teacher_disagreement_score":0.04209318,"about_ca_system_score_codex":0.0000457612,"about_ca_system_score_gemma":0.000032580152,"threshold_uncertainty_score":0.52717036},"labels":[],"label_agreement":null},{"id":"W2136677555","doi":"10.1101/cshperspect.a019752","title":"Mechanisms of Antifungal Drug Resistance","year":2014,"lang":"en","type":"review","venue":"Cold Spring Harbor Perspectives in Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":622,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Antifungal; Antifungal drug; Drug resistance; Drug; Efflux; Antifungal drugs; Fluconazole; Biology; Multiple drug resistance; Resistance (ecology); Intensive care medicine; Pharmacology; Medicine; Microbiology; Genetics; Ecology","score_opus":0.03660985135455397,"score_gpt":0.3465387099850441,"score_spread":0.30992885863049013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136677555","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016187642,0.99229586,0.0012390355,0.00025230736,0.00036380973,0.0013628657,0.000013106243,0.00008342418,0.0042277058],"genre_scores_gemma":[0.024711972,0.970468,0.001617962,0.000054432934,0.0003678638,0.00006869201,0.000004407186,0.000111366775,0.0025953373],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99575305,0.00030194613,0.001434576,0.001122202,0.0008341415,0.0005540967],"domain_scores_gemma":[0.99680686,0.0005707691,0.0006748961,0.0013929505,0.0003160995,0.00023842543],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018463602,0.0006651905,0.0047518825,0.00067979,0.000071644215,0.000009172354,0.0004554286,0.00036997415,0.00025158856],"category_scores_gemma":[0.0018615809,0.0005172861,0.0005797604,0.00092993194,0.00073273387,0.000066773915,0.0001132293,0.0011700626,0.000027029088],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008847549,0.0015018791,0.001089612,0.25077298,0.0012912375,0.0009173961,0.0023913095,6.63364e-7,0.002891089,0.7112319,0.00475536,0.022271818],"study_design_scores_gemma":[0.0021375646,0.00030874443,0.0032218301,0.15641825,0.0018526686,0.0000055609576,0.00096005946,0.000009071541,0.00013807444,0.00040300665,0.8337621,0.0007830709],"about_ca_topic_score_codex":0.00006623965,"about_ca_topic_score_gemma":0.00008415384,"teacher_disagreement_score":0.82900673,"about_ca_system_score_codex":0.00066171685,"about_ca_system_score_gemma":0.0005037203,"threshold_uncertainty_score":0.99972785},"labels":[],"label_agreement":null},{"id":"W2137351193","doi":"10.1093/jac/dkm212","title":"Adequacy of empirical antifungal therapy and effect on outcome among patients with invasive Candida species infections","year":2007,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":230,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Odds ratio; Medicine; Internal medicine; Intensive care unit; Confidence interval; Candida glabrata; Population; Fungemia; Logistic regression; Candida albicans; Mortality rate; Mycosis; Intensive care medicine; Surgery; Antifungal; Biology; Microbiology","score_opus":0.01903725633358398,"score_gpt":0.29661186552572405,"score_spread":0.27757460919214005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137351193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99860525,0.00005661276,0.0001461611,0.0003178767,0.00013605146,0.00034988005,0.000009419661,0.000010059378,0.0003686865],"genre_scores_gemma":[0.99832696,0.0002534796,0.00025018113,0.00086000795,0.0001575112,3.5141545e-7,0.0000039799165,0.000027070395,0.00012046258],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99850184,0.000057434052,0.0006296594,0.00018688545,0.0003762038,0.00024796257],"domain_scores_gemma":[0.99848944,0.00031946867,0.00047748163,0.00018836663,0.00036879955,0.00015642484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057030487,0.00022301776,0.00069505983,0.00023812547,0.00008315286,0.00002149557,0.00008294622,0.00012604061,0.000081423714],"category_scores_gemma":[0.0001395482,0.00013940128,0.00022097034,0.00024783835,0.00032101345,0.00014567467,0.000010113118,0.0003936904,0.0000013319284],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007283914,0.00072953,0.9316629,0.00007637968,0.00019616696,0.000031671232,0.00030458736,0.0000015444185,0.057565093,0.0000043480522,0.0008029253,0.00134095],"study_design_scores_gemma":[0.0066242027,0.0053378087,0.8569351,0.0002500436,0.00004737597,0.000031922325,0.00003925904,4.264641e-7,0.13026392,0.0000033747956,0.00035091527,0.00011567229],"about_ca_topic_score_codex":0.00002505882,"about_ca_topic_score_gemma":0.000065835084,"teacher_disagreement_score":0.07472782,"about_ca_system_score_codex":0.000085222724,"about_ca_system_score_gemma":0.00012339375,"threshold_uncertainty_score":0.5684619},"labels":[],"label_agreement":null},{"id":"W2137723347","doi":"10.1128/ec.00021-12","title":"Motor Protein Myo5p Is Required To Maintain the Regulatory Circuit Controlling <i>WOR1</i> Expression in Candida albicans","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; McGill University; Royal Victoria Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Cell biology; Ectopic expression; Mating type; Gene expression; Phenotype; Mutant; Fungal protein; Phenotypic switching; Gene; Genetics","score_opus":0.017972540574087106,"score_gpt":0.2497343727542642,"score_spread":0.2317618321801771,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137723347","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98838407,0.0011003856,0.0011752255,0.0013699704,0.00017100059,0.0017947959,0.000013406343,0.00004759244,0.005943566],"genre_scores_gemma":[0.987651,0.000013626684,0.00039376057,0.0022450387,0.00033007443,0.00009439154,0.0000075756598,0.000035014255,0.009229552],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99787956,0.0001568339,0.00044139058,0.0003744033,0.00046477435,0.0006830365],"domain_scores_gemma":[0.99857384,0.00014377639,0.000096541495,0.00077286694,0.000060296523,0.00035266887],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010546837,0.00022388955,0.00040488582,0.00008546725,0.00013046847,0.000020808673,0.00018933401,0.00012641754,0.00057161256],"category_scores_gemma":[0.00019206319,0.000155869,0.0001399597,0.00026188637,0.000099901124,0.00012449865,0.00006714215,0.00032932888,0.00015929036],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012832585,0.0005508584,0.58169186,0.00027258645,0.00002609294,0.000055645716,0.0037645919,0.000013808911,0.4056095,0.00041025985,0.0048712674,0.0014502493],"study_design_scores_gemma":[0.0029659923,0.00030659398,0.8996654,0.0006348403,0.00007521696,0.000008515745,0.0020308634,0.00015022264,0.08861848,0.0003898126,0.004767703,0.00038632407],"about_ca_topic_score_codex":0.00018408081,"about_ca_topic_score_gemma":0.00009731846,"teacher_disagreement_score":0.31797355,"about_ca_system_score_codex":0.0002876032,"about_ca_system_score_gemma":0.00015999758,"threshold_uncertainty_score":0.63561535},"labels":[],"label_agreement":null},{"id":"W2137988051","doi":"10.1128/aac.00686-11","title":"Wild-Type MIC Distributions and Epidemiological Cutoff Values for Amphotericin B and Aspergillus spp. for the CLSI Broth Microdilution Method (M38-A2 Document)","year":2011,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":160,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Broth microdilution; Microbiology; Caspofungin; Aspergillus terreus; Biology; Amphotericin B; Aspergillus flavus; Population; Veterinary medicine; Minimum inhibitory concentration; Medicine; Antifungal; Antimicrobial","score_opus":0.04928389976467626,"score_gpt":0.3331014180114307,"score_spread":0.2838175182467545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137988051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9517568,0.00059083785,0.04191487,0.004234782,0.00010742292,0.001227037,0.00009687025,0.000030624487,0.000040778923],"genre_scores_gemma":[0.96703416,0.006183627,0.018012686,0.007832133,0.00013758891,0.00002819337,0.00008886064,0.000023046849,0.00065972353],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988395,0.000051692154,0.00029702153,0.00043600495,0.00006206295,0.0003136916],"domain_scores_gemma":[0.9992655,0.00023483623,0.00010240529,0.00020294779,0.00009374207,0.00010054894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005341678,0.00021796624,0.00041408004,0.000026337506,0.00037004155,0.00003499947,0.00007294481,0.00014383934,0.00007169044],"category_scores_gemma":[0.000099603894,0.00013536931,0.00012442474,0.00007376705,0.00031070673,0.00007536425,0.0000313861,0.00010513516,0.000001419951],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013056739,0.0011122501,0.30729508,0.00097169704,0.0012977488,0.000012317829,0.0030325754,0.0000012309447,0.40239117,0.002838912,0.18979295,0.07819733],"study_design_scores_gemma":[0.0061793146,0.0013655344,0.82722765,0.00015959762,0.0005137645,0.00009919325,0.00024982952,0.00055081776,0.053236883,0.0042751417,0.10567372,0.00046854423],"about_ca_topic_score_codex":0.00017549681,"about_ca_topic_score_gemma":0.000019445795,"teacher_disagreement_score":0.51993257,"about_ca_system_score_codex":0.000031624597,"about_ca_system_score_gemma":0.000030884374,"threshold_uncertainty_score":0.55202},"labels":[],"label_agreement":null},{"id":"W2138120954","doi":"10.1128/jcm.39.9.3254-3259.2001","title":"International Surveillance of Bloodstream Infections Due to <i>Candida</i> Species: Frequency of Occurrence and In Vitro Susceptibilities to Fluconazole, Ravuconazole, and Voriconazole of Isolates Collected from 1997 through 1999 in the SENTRY Antimicrobial Surveillance Program","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":523,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Voriconazole; Fluconazole; Candida parapsilosis; Corpus albicans; Microbiology; Candida albicans; Candida glabrata; Candida tropicalis; Fungemia; Biology; Amphotericin B; Itraconazole; Antifungal","score_opus":0.02334154867666142,"score_gpt":0.33557037852402455,"score_spread":0.3122288298473631,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138120954","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99641395,0.00058779377,0.00007036458,0.0011510248,0.00032963825,0.00047472384,0.0008433053,0.000005036776,0.00012414447],"genre_scores_gemma":[0.9966615,0.0014700611,0.0013555895,0.00031086168,0.00012239248,0.0000041001554,0.00005457943,0.000006774342,0.00001418025],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968459,0.00042381938,0.002051876,0.0003130444,0.00011137751,0.00025400348],"domain_scores_gemma":[0.99638045,0.002076764,0.0007310497,0.00023962528,0.00048130742,0.00009081818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012912267,0.00018606032,0.0012764347,0.0001819764,0.000026895314,0.00001079118,0.00023980075,0.00019671484,0.000045952722],"category_scores_gemma":[0.0018897915,0.00013661369,0.00017384504,0.0005205668,0.0006039934,0.00008673105,0.0000888594,0.00046220573,7.245552e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002084856,0.0010217895,0.7690648,0.000058400947,0.00008650819,0.000019493202,0.00043877045,0.0000049103264,0.22598149,0.000009432998,0.0004120739,0.00081750995],"study_design_scores_gemma":[0.0031022984,0.0012246816,0.98450625,0.00024777374,0.00002633042,0.00018189618,0.00056270853,0.000008525751,0.008238393,0.000092766866,0.0016868839,0.00012147564],"about_ca_topic_score_codex":0.0008940151,"about_ca_topic_score_gemma":0.005498466,"teacher_disagreement_score":0.2177431,"about_ca_system_score_codex":0.000038066653,"about_ca_system_score_gemma":0.00024251643,"threshold_uncertainty_score":0.55709445},"labels":[],"label_agreement":null},{"id":"W2138585071","doi":"10.9778/cmajo.20130062","title":"Incidence of invasive aspergillosis following remission-induction chemotherapy for acute leukemia: a retrospective cohort study in a single Canadian tertiary care centre","year":2014,"lang":"en","type":"article","venue":"CMAJ Open","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"","keywords":"Medicine; Induction chemotherapy; Aspergillosis; Retrospective cohort study; Acute leukemia; Incidence (geometry); Leukemia; Cohort; Chemotherapy; Internal medicine; Medical record; Surgery; Immunology","score_opus":0.014735758186838076,"score_gpt":0.3004679123724566,"score_spread":0.28573215418561854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138585071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99399555,0.00004923056,0.000029820356,0.00047100257,0.00010850289,0.0033300654,0.000015738255,0.000011693959,0.0019884103],"genre_scores_gemma":[0.9985572,0.000012476124,0.00044101878,0.0002992248,0.000049877417,0.000085388965,0.000033766908,0.00002359049,0.0004974307],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99862224,0.000072588016,0.00031738624,0.0004716788,0.00024254393,0.00027357883],"domain_scores_gemma":[0.9989759,0.00006290878,0.00010454124,0.0004379447,0.00024019559,0.00017852469],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004962348,0.00015328197,0.0005286521,0.00011017529,0.00011752107,0.000028112618,0.00022251999,0.0001225554,0.000050670227],"category_scores_gemma":[0.00062190124,0.0001349718,0.000115637755,0.000245439,0.000038564438,0.00020636026,0.000060501396,0.0001647727,0.0000026965627],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023759781,0.00010661812,0.98027897,0.000045097768,0.00013800053,0.000023800842,0.004246976,0.0000012880288,0.012929228,0.0000073305655,0.00040289655,0.0015822047],"study_design_scores_gemma":[0.0020236815,0.00040730802,0.9776651,0.00036905255,0.00015509741,0.000002247694,0.006377791,0.000022488943,0.012668533,0.00007352032,0.00010042333,0.00013475165],"about_ca_topic_score_codex":0.11995769,"about_ca_topic_score_gemma":0.45988405,"teacher_disagreement_score":0.33992636,"about_ca_system_score_codex":0.0019219964,"about_ca_system_score_gemma":0.0008036582,"threshold_uncertainty_score":0.8859026},"labels":[],"label_agreement":null},{"id":"W2138620668","doi":"10.1128/jcm.40.3.852-856.2002","title":"Trends in Antifungal Susceptibility of <i>Candida</i> spp. Isolated from Pediatric and Adult Patients with Bloodstream Infections: SENTRY Antimicrobial Surveillance Program, 1997 to 2000","year":2002,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":322,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Pfizer Pharmaceuticals; Pfizer; Bristol-Myers Squibb","keywords":"Fluconazole; Posaconazole; Itraconazole; Voriconazole; Candida glabrata; Candida tropicalis; Candida parapsilosis; Amphotericin B; Fungemia; Microbiology; Medicine; Flucytosine; Biology; Internal medicine; Candida albicans; Antifungal","score_opus":0.014742871524709288,"score_gpt":0.3037921256094469,"score_spread":0.28904925408473764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138620668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99828005,0.0003401823,0.00001745599,0.00040835133,0.0002815329,0.00033219843,0.00026915467,0.000015732932,0.000055343608],"genre_scores_gemma":[0.9976241,0.00054659176,0.0010803512,0.0003144953,0.00027210932,0.0000015812726,0.00007639503,0.000016769289,0.00006762328],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968167,0.0003050641,0.0019565213,0.00044655974,0.00011711341,0.0003580352],"domain_scores_gemma":[0.997462,0.0005196002,0.0008237562,0.00031093063,0.00062909623,0.0002546278],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070000504,0.0002385005,0.0013200876,0.00027122392,0.000039740753,0.000012591967,0.00012951047,0.0003548569,0.00032520315],"category_scores_gemma":[0.0008674405,0.00017111233,0.00026868723,0.0006309506,0.00032432313,0.000094572904,0.000053005482,0.0007418966,0.0000108976255],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029788306,0.0042255744,0.9761453,0.000053988588,0.00012157075,0.00002876197,0.00006519582,0.0000022661097,0.0031474303,4.4965782e-7,0.004253756,0.008976821],"study_design_scores_gemma":[0.007193771,0.0056796316,0.9856367,0.00011772018,0.00014349476,0.000050630162,0.000023761691,0.000014045153,0.00018896935,0.000003994709,0.00078228593,0.00016496704],"about_ca_topic_score_codex":0.00013805526,"about_ca_topic_score_gemma":0.0012670328,"teacher_disagreement_score":0.009491373,"about_ca_system_score_codex":0.00005518088,"about_ca_system_score_gemma":0.0001273287,"threshold_uncertainty_score":0.69777584},"labels":[],"label_agreement":null},{"id":"W2138874841","doi":"10.1128/ec.00334-13","title":"Using Aspergillus nidulans To Identify Antifungal Drug Resistance Mutations","year":2013,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Aspergillus nidulans; Biology; Antifungal drug; Antifungal; Drug resistance; Echinocandins; Aspergillus; Drug; Mutation; Fungal protein; Genetics; Microbiology; Computational biology; Saccharomyces cerevisiae; Gene; Amphotericin B; Pharmacology; Mutant","score_opus":0.029371114975714485,"score_gpt":0.31971670346358505,"score_spread":0.29034558848787057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138874841","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9660242,0.00035412487,0.0027589377,0.0011133079,0.0003228733,0.00078462076,0.000013352495,0.00010340042,0.028525138],"genre_scores_gemma":[0.9406991,0.00001347496,0.008775056,0.00066023413,0.0001575891,0.000016812679,0.000027968132,0.000037687314,0.04961209],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980813,0.00006605898,0.0004238458,0.0005036674,0.00044810685,0.0004770022],"domain_scores_gemma":[0.998567,0.00010383937,0.00007964497,0.00063173065,0.00025356567,0.00036425662],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002355245,0.00022225472,0.00035894435,0.00013368778,0.00021374393,0.00007487202,0.00016228527,0.00007979182,0.002023124],"category_scores_gemma":[0.00015939982,0.00020541468,0.00016094522,0.00044305588,0.00010601489,0.00019853495,0.00006391943,0.0002396732,0.0019113293],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020282005,0.0006668664,0.7820402,0.0005977808,0.00007807669,0.00023878264,0.0015273807,0.00016339858,0.15210806,0.00033749794,0.06141172,0.00062743685],"study_design_scores_gemma":[0.000710037,0.00004470375,0.9861599,0.00017013549,0.000113616705,0.0000118925445,0.0007286384,0.0005135974,0.009840893,0.0003669942,0.0010520434,0.00028752533],"about_ca_topic_score_codex":0.0002886065,"about_ca_topic_score_gemma":0.00024361591,"teacher_disagreement_score":0.20411974,"about_ca_system_score_codex":0.00017501679,"about_ca_system_score_gemma":0.00016542243,"threshold_uncertainty_score":0.99888915},"labels":[],"label_agreement":null},{"id":"W2139043187","doi":"10.1086/520980","title":"Micafungin versus Caspofungin for Treatment of Candidemia and Other Forms of Invasive Candidiasis","year":2007,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":632,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Health Sciences","funders":"Astellas Pharma","keywords":"Micafungin; Caspofungin; Echinocandin; Medicine; Internal medicine; Echinocandins; Gastroenterology; Amphotericin B; Antifungal","score_opus":0.06995268327528775,"score_gpt":0.4145226930788549,"score_spread":0.34457000980356717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139043187","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965152,0.0016532878,0.00021412478,0.0000373763,0.00015330667,0.0006476172,0.00022474294,0.000024122706,0.0005302285],"genre_scores_gemma":[0.99900824,0.0005677966,0.00004713838,0.00011228124,0.00011850336,0.000021408452,0.00002176364,0.00001560916,0.00008727775],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987934,0.000028237797,0.0006020041,0.00025071675,0.00011228085,0.00021331936],"domain_scores_gemma":[0.9965389,0.0026217499,0.00019132439,0.00024826222,0.00013607767,0.00026370172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026429084,0.0001363099,0.0006259319,0.00006754659,0.0000392226,0.0000038573176,0.00003094344,0.0001226433,0.00004667592],"category_scores_gemma":[0.0015549979,0.00009916105,0.00034599402,0.000107019776,0.0003069389,0.000038309918,0.000012478322,0.000039561128,0.0000016998251],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034678502,0.0009584211,0.9835566,0.00023339472,0.00027963278,0.000008456741,0.000074100164,8.2949595e-7,0.00033224953,0.00026965802,0.00017269806,0.010646089],"study_design_scores_gemma":[0.0071669095,0.0052488884,0.9813541,0.000087984496,0.00071846164,0.0000018997292,0.00025885095,0.000010990324,0.0036574656,0.0003813294,0.001001169,0.00011194968],"about_ca_topic_score_codex":0.00030015456,"about_ca_topic_score_gemma":0.0025404056,"teacher_disagreement_score":0.010534139,"about_ca_system_score_codex":0.00009587049,"about_ca_system_score_gemma":0.00023343097,"threshold_uncertainty_score":0.40436703},"labels":[],"label_agreement":null},{"id":"W2139659621","doi":"10.1139/w09-009","title":"Subinhibitory concentrations of fluconazole increase the intracellular sodium content in both fluconazole-resistant and -sensitive <i>Candida albicans</i> strains","year":2009,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"European Commission","keywords":"Fluconazole; Candida albicans; Microbiology; Intracellular; Chemistry; Biology; Sodium; Antifungal; Biochemistry","score_opus":0.013448318553153057,"score_gpt":0.22113226368133468,"score_spread":0.2076839451281816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139659621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99223405,0.0033627483,0.000036085166,0.0034197357,0.000114522954,0.00023531953,0.00012742239,0.0000020985183,0.0004680013],"genre_scores_gemma":[0.9978287,0.00010769876,0.000060238803,0.0017383428,0.000082951025,6.7083283e-7,0.000020751484,0.000006528179,0.00015408067],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986971,0.00016801186,0.00058266876,0.00015571967,0.000059568916,0.0003369128],"domain_scores_gemma":[0.9988749,0.000106083804,0.00023204109,0.00016390138,0.00024746792,0.0003755959],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005060211,0.00013994605,0.00045123973,0.00013844832,0.00008863457,0.000011708285,0.000101048645,0.00012343228,0.00007809192],"category_scores_gemma":[0.00018531622,0.000101603175,0.000106474596,0.000102187296,0.0006770852,0.00004625976,0.000006291999,0.00037762464,0.0000012860226],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004225538,0.00005882468,0.031586893,0.000017176195,0.000058649006,0.00048189837,0.00079091755,0.0000027088186,0.96357274,0.0009893207,0.0014526644,0.00056563667],"study_design_scores_gemma":[0.0056635705,0.0017824698,0.84338,0.00048653202,0.00024630924,0.0015508262,0.00762391,0.0000225945,0.12501414,0.00025642366,0.013644171,0.00032906324],"about_ca_topic_score_codex":0.0048001437,"about_ca_topic_score_gemma":0.06738501,"teacher_disagreement_score":0.8385586,"about_ca_system_score_codex":0.00019297564,"about_ca_system_score_gemma":0.0018885924,"threshold_uncertainty_score":0.94963276},"labels":[],"label_agreement":null},{"id":"W2139990552","doi":"10.1128/jcm.01907-06","title":"<i>Mucor circinelloides</i> Was Identified by Molecular Methods as a Cause of Primary Cutaneous Zygomycosis","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Zygomycosis; Mucor circinelloides; Mucormycosis; Mucor; Mucorales; Mycosis; Phycomycetes; Microbiology; Medicine; Biology; Pathology; Immunology; Amphotericin B; Antifungal; Aspergillus; Inoculation","score_opus":0.03397129101957202,"score_gpt":0.4041329529072851,"score_spread":0.3701616618877131,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139990552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98931074,0.0032615003,0.0041856356,0.0009536509,0.0005894653,0.00020459836,0.000031629515,0.00001206311,0.0014506908],"genre_scores_gemma":[0.9827241,0.00061251177,0.012485776,0.0021859864,0.00027336512,0.0000011565575,0.000032767304,0.000026377664,0.0016579941],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99562156,0.0007391553,0.0028392666,0.0003333419,0.00014058693,0.00032611677],"domain_scores_gemma":[0.9958121,0.0015819455,0.0013883647,0.00041494772,0.00060519227,0.00019741381],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024899922,0.00021184665,0.0017542263,0.000114134076,0.00003369774,0.000009284977,0.0002551757,0.0004540346,0.00019830313],"category_scores_gemma":[0.0021948249,0.0001596775,0.000895423,0.0001875374,0.00048347432,0.000058579557,0.000068568894,0.0007814007,0.000025670082],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019973188,0.00081064826,0.050056852,0.00010503457,0.00030179246,0.00050256954,0.000010866319,0.000002195867,0.9228938,0.00005341887,0.02026178,0.0030036923],"study_design_scores_gemma":[0.010950303,0.0077434755,0.07135476,0.0006456915,0.0025713358,0.013035426,0.00014715768,0.0000111447935,0.797514,0.0044635306,0.090873934,0.0006891885],"about_ca_topic_score_codex":0.000056154116,"about_ca_topic_score_gemma":0.000010778486,"teacher_disagreement_score":0.12537979,"about_ca_system_score_codex":0.00007231015,"about_ca_system_score_gemma":0.00042947853,"threshold_uncertainty_score":0.65114594},"labels":[],"label_agreement":null},{"id":"W2140336790","doi":"10.1128/jcm.01135-11","title":"Evaluation of Luminex xTAG Fungal Analyte-Specific Reagents for Rapid Identification of Clinically Relevant Fungi","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Candida parapsilosis; Candida tropicalis; Microbiology; Candida krusei; Biology; Candida glabrata; Candida albicans; Aspergillus fumigatus; Aspergillus","score_opus":0.23517269876739974,"score_gpt":0.44053602445298673,"score_spread":0.205363325685587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140336790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937461,0.001681608,0.0024826664,0.00015971171,0.0010066273,0.0005246002,0.000056244655,0.0000048515426,0.0003376118],"genre_scores_gemma":[0.9937688,0.0015375166,0.004077045,0.00009377895,0.0003504115,0.0000033839774,0.000025565876,0.000015322605,0.00012817558],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9923364,0.00083012163,0.0059910617,0.00031915584,0.0003069886,0.00021629357],"domain_scores_gemma":[0.98955274,0.0013188564,0.004223388,0.00049744814,0.0042617144,0.00014588554],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.023376126,0.00014815458,0.0013167374,0.0001679883,0.00002892014,0.0000030677093,0.00025991435,0.00039895583,0.00036179298],"category_scores_gemma":[0.009700805,0.000110764755,0.0009860244,0.00016730769,0.00046277494,0.00008321258,0.000035416095,0.00041258128,0.00001136357],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012577763,0.0021188736,0.2532795,0.00016627769,0.000737774,0.000007173072,0.0001806585,0.0000029375776,0.65852886,0.000113582784,0.003481467,0.06880516],"study_design_scores_gemma":[0.008357391,0.0076451274,0.9279228,0.00029328285,0.0021605918,0.00011371798,0.00026800096,0.00018186594,0.048196148,0.0013501575,0.0033379805,0.00017294823],"about_ca_topic_score_codex":0.0000031301063,"about_ca_topic_score_gemma":0.0000071011045,"teacher_disagreement_score":0.6746433,"about_ca_system_score_codex":0.000053840122,"about_ca_system_score_gemma":0.0006099346,"threshold_uncertainty_score":0.9986409},"labels":[],"label_agreement":null},{"id":"W2140877137","doi":"10.1086/605601","title":"Empirical versus Preemptive Antifungal Therapy for Fever during Neutropenia","year":2009,"lang":"en","type":"letter","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Astellas Pharma; Pfizer; Amgen","keywords":"Medicine; Neutropenia; Antifungal; Intensive care medicine; Fever of unknown origin; Dermatology; Internal medicine; Chemotherapy","score_opus":0.10325116626384517,"score_gpt":0.4291927508387514,"score_spread":0.32594158457490624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140877137","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87832665,0.0026536963,0.000078073266,0.10934722,0.0027847595,0.003537174,0.00058121915,0.0006335858,0.0020575947],"genre_scores_gemma":[0.55458355,0.0020566438,0.000045285597,0.4176753,0.01821907,0.00023466068,0.0010734838,0.00018342983,0.0059286063],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99576557,0.00035491723,0.0011299315,0.0013910244,0.00054523535,0.0008133229],"domain_scores_gemma":[0.99541414,0.0022800842,0.0003807711,0.001047611,0.0004494701,0.0004279408],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00029747857,0.0006596141,0.0016751504,0.0001388467,0.00028813755,0.00009750153,0.0002633219,0.0014067503,0.00043593044],"category_scores_gemma":[0.002029474,0.00053479074,0.0019390829,0.00021672095,0.0005255348,0.00014273348,0.000076215445,0.0022453305,0.00015289872],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038053633,0.00090325356,0.40540743,0.00025766838,0.00046802248,0.00035217477,0.000008905961,5.9681076e-7,0.000012304088,0.000002192003,0.58668154,0.002100524],"study_design_scores_gemma":[0.009071075,0.0028841007,0.73506373,0.00018672485,0.00073109346,0.000006995892,0.000006150225,0.000006876572,0.000022010698,0.00018465942,0.25135452,0.00048208467],"about_ca_topic_score_codex":0.000009154466,"about_ca_topic_score_gemma":0.00001409308,"teacher_disagreement_score":0.33532706,"about_ca_system_score_codex":0.00024305667,"about_ca_system_score_gemma":0.00066449307,"threshold_uncertainty_score":0.9998896},"labels":[],"label_agreement":null},{"id":"W2141091298","doi":"10.1128/ec.00077-08","title":"Heterotrimeric G-Protein Subunit Function in <i>Candida albicans</i> : both the α and β Subunits of the Pheromone Response G Protein Are Required for Mating","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"National Research Council Canada; Canadian Institutes of Health Research","keywords":"Heterotrimeric G protein; Biology; Protein subunit; G protein; Pheromone; Candida albicans; Fungal protein; Function (biology); Gs alpha subunit; Genetics; Cell biology; Saccharomyces cerevisiae; Yeast; Gene; Signal transduction","score_opus":0.025255600274749202,"score_gpt":0.23813713622841134,"score_spread":0.21288153595366213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141091298","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99569976,0.0006270013,0.00028272741,0.0008182394,0.0000481746,0.0021738599,0.0000122467145,0.000021143553,0.00031684292],"genre_scores_gemma":[0.9943452,0.000017224986,0.00024520405,0.00020297982,0.00004361566,0.000100958234,0.0000043983423,0.000024759907,0.0050156675],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99844724,0.00031377538,0.0004021401,0.00027793978,0.0002825492,0.00027637606],"domain_scores_gemma":[0.9988421,0.00025511807,0.00023155194,0.0005133166,0.00009121903,0.0000666682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008215883,0.00016724918,0.00032621925,0.000054946264,0.00021728649,0.000009270939,0.0001301847,0.00008233467,0.000039801704],"category_scores_gemma":[0.00045194605,0.000102862796,0.00010268475,0.0004125929,0.00028597127,0.000071625866,0.000052603038,0.00023650104,0.0000032782627],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013746813,0.0004885956,0.45859712,0.00093229424,0.000044861667,0.00003648302,0.001931936,0.000016312912,0.5223522,0.000044090848,0.00051492645,0.0012943186],"study_design_scores_gemma":[0.0022410594,0.00061011076,0.94132847,0.00043954074,0.000052329113,0.00001490941,0.0009758885,0.00020153889,0.05371155,0.0001372957,0.00015517265,0.00013213829],"about_ca_topic_score_codex":0.00024800777,"about_ca_topic_score_gemma":0.00022013411,"teacher_disagreement_score":0.48273134,"about_ca_system_score_codex":0.000069088244,"about_ca_system_score_gemma":0.00017835779,"threshold_uncertainty_score":0.4194623},"labels":[],"label_agreement":null},{"id":"W2141147090","doi":"10.1111/ajt.12114","title":"Candida Infections in Solid Organ Transplantation","year":2013,"lang":"en","type":"article","venue":"American Journal of Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Society of Transplantation; American Society of Transplantation","keywords":"Medicine; Incidence (geometry); Organ transplantation; Transplantation; Epidemiology; Internal medicine; Liver transplantation; Intensive care medicine","score_opus":0.006219534789919271,"score_gpt":0.2727279539716805,"score_spread":0.2665084191817612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141147090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98962873,0.0000391765,0.008922345,0.000606746,0.000080849175,0.00016387373,0.0000066421503,0.0000105150275,0.000541101],"genre_scores_gemma":[0.9975083,0.0012908462,0.0008725324,0.00019628581,0.00006157264,0.000004828207,0.000019449832,0.000010462176,0.000035741286],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989776,0.0000678368,0.00045606773,0.00010111962,0.00022533225,0.00017202125],"domain_scores_gemma":[0.9993331,0.00008593301,0.00020403112,0.000077917495,0.00018937454,0.000109663815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019984439,0.00009369715,0.00028419957,0.00025009312,0.000041417687,0.000014958973,0.000046150828,0.00003230191,0.00015366625],"category_scores_gemma":[0.000024054643,0.00007796688,0.00009092622,0.0003783038,0.00009936788,0.00029548784,9.1836466e-7,0.00021648959,0.000020385738],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009642436,0.00029401237,0.9101165,0.00019289134,0.0000668447,0.00019694246,0.003859339,0.00015080978,0.055038653,0.000046627927,0.000080543716,0.028992614],"study_design_scores_gemma":[0.0015108881,0.0009998874,0.9899234,0.00023354302,0.00014602617,0.0008656174,0.001030071,0.00006156093,0.00500451,0.00011114356,0.000024071274,0.00008926368],"about_ca_topic_score_codex":0.0007646425,"about_ca_topic_score_gemma":0.0006493164,"teacher_disagreement_score":0.07980694,"about_ca_system_score_codex":0.00007630972,"about_ca_system_score_gemma":0.00014070446,"threshold_uncertainty_score":0.3179397},"labels":[],"label_agreement":null},{"id":"W2141158025","doi":"10.1101/cshperspect.a019687","title":"Host Cell Invasion by Medically Important Fungi","year":2014,"lang":"en","type":"review","venue":"Cold Spring Harbor Perspectives in Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Endocytosis; Biology; Cryptococcus neoformans; Candida albicans; Cell biology; Cell; Host (biology); Microbiology; Intracellular","score_opus":0.03152522471027936,"score_gpt":0.33118294202209514,"score_spread":0.2996577173118158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141158025","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00036470473,0.99314463,0.00034830385,0.00044981414,0.0004335941,0.001693666,0.000022479742,0.00013383335,0.0034089617],"genre_scores_gemma":[0.009205293,0.98777443,0.00031240488,0.00027882252,0.0010367832,0.00011174763,0.00002254324,0.00015177304,0.0011062259],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99441916,0.00029175892,0.0018016087,0.0015138746,0.0011694004,0.00080418534],"domain_scores_gemma":[0.99643636,0.00061698427,0.0006810372,0.0014191231,0.00022710382,0.0006193758],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0022436702,0.00088597037,0.0044330955,0.000542439,0.000114772425,0.000020753117,0.0005342418,0.00073540246,0.00063946925],"category_scores_gemma":[0.0017268168,0.00064426026,0.00055991736,0.00081958185,0.00077343296,0.00007808998,0.00016698541,0.001985806,0.000093943716],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001938162,0.009780563,0.033670492,0.46100467,0.00313117,0.008412773,0.0073484746,4.897197e-7,0.028319737,0.05340452,0.11998535,0.27300358],"study_design_scores_gemma":[0.001703081,0.00063715404,0.0017888405,0.043364387,0.0010851137,0.000008598236,0.00043843914,0.000011376678,0.000043959702,0.000008328299,0.95031446,0.00059624],"about_ca_topic_score_codex":0.00015905859,"about_ca_topic_score_gemma":0.000042147003,"teacher_disagreement_score":0.8303291,"about_ca_system_score_codex":0.0011037665,"about_ca_system_score_gemma":0.00080649083,"threshold_uncertainty_score":0.9996009},"labels":[],"label_agreement":null},{"id":"W2141374001","doi":"10.1128/jcm.00248-12","title":"Wild-Type MIC Distributions and Epidemiological Cutoff Values for Amphotericin B, Flucytosine, and Itraconazole and Candida spp. as Determined by CLSI Broth Microdilution","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":168,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Flucytosine; Amphotericin B; Itraconazole; Broth microdilution; Candida parapsilosis; Candida glabrata; Candida krusei; Microbiology; Candida tropicalis; Biology; Candida albicans; Medicine; Veterinary medicine; Internal medicine; Antifungal; Minimum inhibitory concentration; Antibiotics","score_opus":0.04555728301403828,"score_gpt":0.39583623387550226,"score_spread":0.350278950861464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141374001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98653305,0.009987539,0.00090384006,0.0018364193,0.0003278063,0.00026751705,0.000121393256,0.000008112885,0.000014297214],"genre_scores_gemma":[0.99280447,0.002916312,0.0024656057,0.0011616887,0.0003847574,0.000002090093,0.000064534135,0.000009332718,0.00019122468],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99795103,0.00024853926,0.0011455911,0.00025788302,0.000038808208,0.00035817144],"domain_scores_gemma":[0.9971939,0.00165276,0.0004808205,0.00012676335,0.00020078437,0.00034501165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019835446,0.00018014279,0.0009917032,0.000043259675,0.000111124595,0.0000120746245,0.00006214199,0.0003730589,0.000035414825],"category_scores_gemma":[0.0037033828,0.00012088721,0.00017332424,0.000058007758,0.00070846477,0.00010684915,0.00004910715,0.0004117207,0.0000041028698],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002330806,0.0002378339,0.5167335,0.00005636006,0.000091558504,0.000004777093,0.00002519256,3.5618438e-8,0.46554473,0.00004374446,0.012417661,0.00251379],"study_design_scores_gemma":[0.0045950534,0.0040794886,0.9247562,0.00014629042,0.00046739972,0.0021072018,0.000089886154,0.000023819613,0.00778333,0.0007077435,0.05500983,0.00023374187],"about_ca_topic_score_codex":0.00002340732,"about_ca_topic_score_gemma":0.000011221624,"teacher_disagreement_score":0.4577614,"about_ca_system_score_codex":0.000036641948,"about_ca_system_score_gemma":0.00010457456,"threshold_uncertainty_score":0.49296373},"labels":[],"label_agreement":null},{"id":"W2141612732","doi":"10.1002/pbc.23415","title":"Antifungal prophylaxis in pediatric hematology/oncology: New choices &amp; new data","year":2011,"lang":"en","type":"review","venue":"Pediatric Blood & Cancer","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Cancer Institute; National Institutes of Health; Canadian Institutes of Health Research; Astellas Pharma; Children’s Oncology Group","keywords":"Posaconazole; Medicine; Voriconazole; Fluconazole; Dosing; Hematology; Intensive care medicine; Antifungal; Echinocandins; Internal medicine; Oncology; Anidulafungin; Drug; Pediatric oncology; Pharmacology; Caspofungin; Cancer","score_opus":0.16860158301131883,"score_gpt":0.41349102363808254,"score_spread":0.2448894406267637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141612732","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011465445,0.9923061,0.000023996183,0.00009964409,0.0014113302,0.00233379,0.0003024783,0.00016938768,0.002206728],"genre_scores_gemma":[0.00020761814,0.9773078,0.0012446638,0.00013682636,0.01059751,0.000143511,0.00062421104,0.00017325832,0.009564611],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9932242,0.00033974423,0.0020736689,0.002404879,0.0006750486,0.0012824729],"domain_scores_gemma":[0.9941567,0.0005112582,0.0012346007,0.003010268,0.00016382406,0.00092332193],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00093970844,0.0011466424,0.00482,0.0009820783,0.00011349975,0.000050990227,0.0016823414,0.00171519,0.0020417317],"category_scores_gemma":[0.00085545133,0.0009170315,0.00068419403,0.002631592,0.00013239474,0.00034792584,0.0007584423,0.0024639438,0.00074734533],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020262474,0.0010182568,0.25585705,0.0579114,0.00040583164,0.0003217864,0.00016797056,1.07943684e-7,2.825318e-7,0.000046591813,0.09363367,0.59043443],"study_design_scores_gemma":[0.001910552,0.00036789456,0.0061474615,0.0018404899,0.013472793,0.00014673328,0.000008653816,4.221127e-7,4.5448138e-7,0.000050701212,0.9751816,0.0008722707],"about_ca_topic_score_codex":0.0035497162,"about_ca_topic_score_gemma":0.0057253973,"teacher_disagreement_score":0.8815479,"about_ca_system_score_codex":0.00031862344,"about_ca_system_score_gemma":0.015881542,"threshold_uncertainty_score":0.9998374},"labels":[],"label_agreement":null},{"id":"W2142031285","doi":"10.1186/1476-511x-12-158","title":"Efficacy of an oral and tropically stable lipid-based formulation of Amphotericin B (iCo-010) in an experimental mouse model of systemic candidiasis","year":2013,"lang":"en","type":"article","venue":"Lipids in Health and Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; British Columbia Institute of Technology; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Lipidology; Clinical chemistry; Clinical nutrition; Amphotericin B; Systemic candidiasis; Medicine; Biology; Microbiology; Internal medicine; Antifungal","score_opus":0.03114300133809445,"score_gpt":0.3198268237586272,"score_spread":0.28868382242053275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142031285","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99847585,0.000514467,0.00014152093,0.00005814305,0.000015652115,0.0007343656,0.000047633028,0.0000075844787,0.000004810195],"genre_scores_gemma":[0.99885064,0.00005453534,0.000804872,0.00019129885,0.000014559275,0.000023729339,0.00004212109,0.000009015991,0.0000092323935],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99872404,0.0001180839,0.0005791448,0.00021579572,0.00016813505,0.00019480001],"domain_scores_gemma":[0.99893665,0.00005379079,0.00014126321,0.00024240182,0.000058819467,0.00056705525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020149656,0.00010356017,0.0004226517,0.00011912151,0.000024650171,0.0000057248003,0.000038495902,0.000052479332,0.000012801813],"category_scores_gemma":[0.00013188612,0.00008921182,0.000031561834,0.00010353398,0.0000811674,0.00019588569,0.000013117862,0.0000715603,1.1573202e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005099213,0.0012682745,0.9326593,0.002979647,0.0000032218866,7.8807864e-7,0.0015946305,0.0006378845,0.054215282,0.00008685126,0.0000059936897,0.0014488709],"study_design_scores_gemma":[0.0065928423,0.001696443,0.80820763,0.0006205035,0.000016660608,3.3876427e-7,0.0021319527,0.17551035,0.005032146,0.00006876055,6.5089125e-7,0.00012173868],"about_ca_topic_score_codex":0.0041437293,"about_ca_topic_score_gemma":0.000410353,"teacher_disagreement_score":0.17487247,"about_ca_system_score_codex":0.000072763054,"about_ca_system_score_gemma":0.00049990346,"threshold_uncertainty_score":0.6264107},"labels":[],"label_agreement":null},{"id":"W2142482664","doi":"10.1086/590566","title":"Defining Responses to Therapy and Study Outcomes in Clinical Trials of Invasive Fungal Diseases: Mycoses Study Group and European Organization for Research and Treatment of Cancer Consensus Criteria","year":2008,"lang":"en","type":"review","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":460,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; CancerCare Manitoba","funders":"National Institutes of Health; Astellas Pharma; Gilead Sciences; Steadman Philippon Research Institute; Eisai; Pfizer; Amgen","keywords":"Medicine; Clinical trial; Coccidioides; Coccidioides immitis; Intensive care medicine; Antifungal; Cryptococcus neoformans; Aspergillosis; Cryptococcosis; Cancer; Histoplasma; Disease; Histoplasmosis; Pathology; Immunology; Internal medicine; Histoplasma capsulatum; Dermatology; Biology; Microbiology","score_opus":0.4496080110103085,"score_gpt":0.5926173956961437,"score_spread":0.14300938468583518,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142482664","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5407014,0.45392394,6.15263e-7,0.000015263136,0.00008748285,0.00468344,0.00056722946,0.000017669727,0.0000029446974],"genre_scores_gemma":[0.452328,0.5473138,0.000006495752,0.00002168599,0.00009184673,0.00013965099,0.000038614562,0.000041058916,0.000018845594],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9861532,0.008750338,0.003496709,0.0009961302,0.00032355505,0.00028007658],"domain_scores_gemma":[0.9613888,0.03622419,0.0008388713,0.0005393875,0.00053839735,0.0004703484],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0045099487,0.00042889634,0.0052261828,0.0003813509,0.0001738774,0.000045890763,0.00009878769,0.00018378544,0.000018926856],"category_scores_gemma":[0.050474916,0.00028746587,0.00047338396,0.00045955635,0.00081865035,0.000042652286,0.00015390484,0.00024562638,0.0000010174097],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023529164,0.011712994,0.73116374,0.0014021136,0.0008861869,0.00007891458,0.0002505144,2.8833222e-8,4.585451e-7,0.000006541936,0.00006194998,0.25208363],"study_design_scores_gemma":[0.008300564,0.024737282,0.9602406,0.0021304595,0.0020276776,0.0000056195267,0.0009018839,3.271059e-7,3.6901594e-7,0.000024341369,0.001417393,0.0002135068],"about_ca_topic_score_codex":0.00019142774,"about_ca_topic_score_gemma":0.0005576237,"teacher_disagreement_score":0.25187013,"about_ca_system_score_codex":0.000095907846,"about_ca_system_score_gemma":0.00077950914,"threshold_uncertainty_score":0.99995774},"labels":[],"label_agreement":null},{"id":"W2142724371","doi":"10.1128/aac.45.7.2060-2063.2001","title":"Heat Treatment of Amphotericin B Modifies Its Serum Pharmacokinetics, Tissue Distribution, and Renal Toxicity following Administration of a Single Intravenous Dose to Rabbits","year":2001,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Pharmacokinetics; Creatinine; Toxicity; Kidney; Medicine; Distribution (mathematics); Amphotericin B; Area under the curve; Spleen; Volume of distribution; Oral administration; Pharmacology; Internal medicine","score_opus":0.02411525134461101,"score_gpt":0.2989361208085957,"score_spread":0.2748208694639847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142724371","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974578,0.000112264555,0.00045889788,0.001350358,0.000051374893,0.00041166958,0.00009657295,0.000011695793,0.000049344366],"genre_scores_gemma":[0.9972446,0.001674661,0.00016789611,0.0005315828,0.000051831747,0.0000024033636,0.000053138647,0.000011063554,0.000262817],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991827,0.000020380408,0.0002843615,0.00023178836,0.00011134578,0.00016940996],"domain_scores_gemma":[0.99964917,0.000014207205,0.000045981764,0.000119605305,0.00007194572,0.00009911045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006118664,0.0001509253,0.00035925332,0.000032451775,0.000059076894,0.000013889042,0.0000313595,0.00006224435,0.00005053884],"category_scores_gemma":[0.0000099203635,0.00012577107,0.00006398849,0.00011389593,0.00006285261,0.000048313566,0.000010624735,0.00003058872,7.606024e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014717357,0.0009077614,0.01989677,0.00008679967,0.000091153255,0.00002699179,0.00072521187,0.0000026309633,0.9600949,0.0000025582615,0.00043677306,0.016256662],"study_design_scores_gemma":[0.0022083765,0.0017537897,0.14540763,0.00011101898,0.000070648246,0.000026066578,0.00005257811,0.00004463606,0.8469679,0.0000045824895,0.003251642,0.00010113563],"about_ca_topic_score_codex":0.00007166574,"about_ca_topic_score_gemma":0.000038334005,"teacher_disagreement_score":0.12551087,"about_ca_system_score_codex":0.00004351844,"about_ca_system_score_gemma":0.000035111832,"threshold_uncertainty_score":0.51287955},"labels":[],"label_agreement":null},{"id":"W2143015319","doi":"10.1091/mbc.e08-02-0191","title":"Regulation of the<i>Candida albicans</i>Cell Wall Damage Response by Transcription Factor Sko1 and PAS Kinase Psk1","year":2008,"lang":"en","type":"article","venue":"Molecular Biology of the Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Caspofungin; Biology; Mutant; Transcription factor; Signal transduction; Kinase; Candida albicans; Protein kinase A; Cell biology; Biochemistry; Gene; Microbiology","score_opus":0.010285294751617458,"score_gpt":0.23228995166858746,"score_spread":0.22200465691697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143015319","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996467,0.00093481207,0.0004391857,0.001326106,0.00006034352,0.000327193,0.00004899002,0.000007905127,0.00038846253],"genre_scores_gemma":[0.9971144,0.00008430233,0.0001098006,0.00044721452,0.0000060701523,0.0000029635323,0.000014857154,0.00001055124,0.0022098308],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99888057,0.00037220068,0.00024747866,0.00021839247,0.0001337522,0.00014762468],"domain_scores_gemma":[0.99919254,0.000059650545,0.00014205424,0.0004920803,0.00006564281,0.000048060003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002160404,0.00012043228,0.00023868847,0.000030033892,0.000079544654,0.000001489618,0.00014026996,0.00014797247,0.00004549088],"category_scores_gemma":[0.00007571368,0.000073321666,0.00015831152,0.000113021066,0.00056651706,0.000018105853,0.000033643122,0.00014143952,0.0000012834413],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009452107,0.00011092713,0.039419737,0.000059985345,0.000013439531,0.0000025948934,0.00029135594,0.0000023566138,0.95868266,0.000019575022,0.00037427383,0.00007785957],"study_design_scores_gemma":[0.00071711466,0.00019173151,0.25106484,0.000021941853,0.000041581436,0.0000035748149,0.00003135833,0.000023176011,0.74595207,0.00011023221,0.0017879847,0.000054404834],"about_ca_topic_score_codex":0.00008767738,"about_ca_topic_score_gemma":0.00001870841,"teacher_disagreement_score":0.21273062,"about_ca_system_score_codex":0.00002632306,"about_ca_system_score_gemma":0.00007095635,"threshold_uncertainty_score":0.29899707},"labels":[],"label_agreement":null},{"id":"W2143274363","doi":"10.1139/w08-062","title":"Comparative study of the activity and kinetic properties of malate dehydrogenase and pyruvate decarboxylase from<i>Candida albicans</i>,<i>Malassezia pachydermatis</i>, and<i>Saccharomyces cerevisiae</i>","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Candida albicans; Pyruvate decarboxylase; Corpus albicans; Biology; Anaerobic exercise; Saccharomyces cerevisiae; Microbiology; Malate dehydrogenase; Malassezia; Biochemistry; Enzyme; Yeast; Alcohol dehydrogenase","score_opus":0.023827536175998587,"score_gpt":0.22901120665273428,"score_spread":0.2051836704767357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143274363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930609,0.0061488044,0.0000020010605,0.0002843559,0.00005176193,0.00034066456,0.00008295399,0.0000016769345,0.000026866373],"genre_scores_gemma":[0.9994657,0.00032220242,0.000040205647,0.00011236936,0.000021628797,0.0000016099729,0.0000014222085,0.0000082320685,0.000026641597],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988629,0.00023635387,0.00044303565,0.00018326883,0.00006566213,0.0002087353],"domain_scores_gemma":[0.9989029,0.00008512558,0.00037230967,0.00018928177,0.00017165339,0.00027874074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017865917,0.0001660144,0.00073337904,0.00010101965,0.00012195031,0.0000072006387,0.000103758866,0.000082066785,0.00002536883],"category_scores_gemma":[0.00007186765,0.000104784456,0.000062153296,0.0001083319,0.00096105743,0.00007164294,0.00003329116,0.00025062216,2.6965512e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022339955,0.000059897702,0.448515,0.000062826985,0.00014606601,0.000058282458,0.002863399,0.0000013507359,0.5478614,0.0000020472603,0.00009842387,0.00010789183],"study_design_scores_gemma":[0.002533678,0.0010444652,0.80860966,0.00036504582,0.00029397092,0.0012184986,0.0022189554,0.000016697146,0.18326464,0.000020075693,0.00026433484,0.00014997835],"about_ca_topic_score_codex":0.007094107,"about_ca_topic_score_gemma":0.041125204,"teacher_disagreement_score":0.36459678,"about_ca_system_score_codex":0.00003674283,"about_ca_system_score_gemma":0.00049441645,"threshold_uncertainty_score":0.99951774},"labels":[],"label_agreement":null},{"id":"W2143443625","doi":"10.1093/jac/dki258","title":"Invasive Candida species infections: a 5 year population-based assessment","year":2005,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":131,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary; Alberta Health Services","funders":"Bristol-Myers Squibb Canada; Bristol-Myers Squibb","keywords":"Fluconazole; Voriconazole; Caspofungin; Population; Biology; Amphotericin B; Incidence (geometry); Candida infections; Internal medicine; Microbiology; Medicine; Antifungal; Environmental health","score_opus":0.011706638012689796,"score_gpt":0.2890417784421316,"score_spread":0.2773351404294418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143443625","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99120086,0.00004981382,0.0010798529,0.0062358617,0.00014685087,0.00015091785,0.0000061260293,0.000014872628,0.0011148273],"genre_scores_gemma":[0.9886083,0.00026323498,0.0068331636,0.0030881632,0.00061757385,5.7977036e-7,0.000008538621,0.000017669441,0.00056276185],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990082,0.000032547483,0.00043661744,0.00011619204,0.00024988077,0.00015660636],"domain_scores_gemma":[0.99912703,0.00006986713,0.00027983368,0.00015394992,0.0002737112,0.0000956248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024824264,0.00012231142,0.00034237737,0.00014710757,0.00007590282,0.00003315698,0.00007030815,0.000077448305,0.0006743551],"category_scores_gemma":[0.000072803625,0.00009761029,0.000249826,0.00016098993,0.00004875875,0.00014146688,0.0000053015656,0.00025348374,0.0000114715895],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005633512,0.0006470961,0.8089715,0.00006358831,0.000119028206,0.000019458681,0.00012009007,0.00014212342,0.17386335,0.000055092874,0.014275237,0.001160045],"study_design_scores_gemma":[0.0044854884,0.00054235244,0.9050092,0.00030551612,0.0000752383,0.00009096545,0.0000918536,0.000045802233,0.072960295,0.000032773914,0.016194426,0.00016606148],"about_ca_topic_score_codex":0.000040957155,"about_ca_topic_score_gemma":0.00016179611,"teacher_disagreement_score":0.10090305,"about_ca_system_score_codex":0.00030238053,"about_ca_system_score_gemma":0.000525349,"threshold_uncertainty_score":0.7383715},"labels":[],"label_agreement":null},{"id":"W2143596010","doi":"10.1128/iai.00813-09","title":"Role of Trehalose Biosynthesis in <i>Aspergillus fumigatus</i> Development, Stress Response, and Virulence","year":2010,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":165,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; McGill University Health Centre; McGill University","keywords":"Virulence; Aspergillus fumigatus; Biology; Microbiology; Biosynthesis; Biochemistry; Enzyme; Gene","score_opus":0.00720453056989934,"score_gpt":0.24954665174582835,"score_spread":0.24234212117592902,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143596010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99857974,0.00016565596,0.0000056675362,0.00004886047,0.00004032201,0.00011484095,0.000006274069,0.000018664663,0.0010199589],"genre_scores_gemma":[0.9994484,0.00026014145,0.00013198853,0.000037074493,0.0000085571655,0.000004263217,0.0000033055248,0.0000053655294,0.00010088073],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999377,0.00009753111,0.00019882948,0.00013277508,0.000084069594,0.00010976055],"domain_scores_gemma":[0.99948967,0.00014671651,0.00004969569,0.0001858734,0.000061493774,0.00006657581],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048631628,0.00008642451,0.00018073697,0.00011163141,0.000088361456,0.000009081261,0.000026716678,0.00009638712,0.00005904468],"category_scores_gemma":[0.00044094058,0.00007534855,0.000023703238,0.00015472286,0.00017763156,0.00009377534,0.00003641711,0.000281079,0.0000027155106],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005190373,0.00012396091,0.57765687,0.000040829127,0.0000067193632,9.1874625e-7,0.00035888355,5.0629517e-8,0.40326703,0.000025783025,0.0000021131873,0.017997805],"study_design_scores_gemma":[0.00037995653,0.000078885714,0.81830305,0.00007072985,0.000008418577,0.0000081217595,0.00024245649,0.000013342979,0.17956974,0.0000377947,0.001228372,0.00005916092],"about_ca_topic_score_codex":0.00071860163,"about_ca_topic_score_gemma":0.0032269275,"teacher_disagreement_score":0.24064614,"about_ca_system_score_codex":0.000017755518,"about_ca_system_score_gemma":0.00007288273,"threshold_uncertainty_score":0.30726248},"labels":[],"label_agreement":null},{"id":"W2143687882","doi":"10.1056/nejmoa065733","title":"A Multicenter, Randomized Trial of Prophylactic Fluconazole in Preterm Neonates","year":2007,"lang":"en","type":"article","venue":"New England Journal of Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":359,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"","keywords":"Medicine; Fluconazole; Randomized controlled trial; Multicenter trial; Low birth weight; Placebo; Chemoprophylaxis; Multicenter study; Pediatrics; Intensive care medicine; Pregnancy; Internal medicine; Antifungal; Dermatology","score_opus":0.016432397666748387,"score_gpt":0.31101976975842,"score_spread":0.29458737209167163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143687882","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927271,0.0020828876,0.00088166265,0.0016093733,0.00055864255,0.0007307056,5.3332695e-7,0.0000049621012,0.0014041224],"genre_scores_gemma":[0.996965,0.000319576,0.0006345713,0.00016747357,0.001572032,0.0000011228551,0.000001713645,0.000010167768,0.00032836496],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.997584,0.00016179332,0.0013245764,0.00012065364,0.00059483305,0.0002141824],"domain_scores_gemma":[0.9976699,0.001080673,0.00057256455,0.0001682689,0.00026848415,0.0002401284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0051285126,0.00013719157,0.0012161026,0.00028427382,0.000014626972,0.0000029167302,0.0000974889,0.00007853749,0.0001488231],"category_scores_gemma":[0.004147321,0.00007847829,0.0001865094,0.00018464249,0.0002465411,0.000082132654,0.00001166707,0.00040150827,0.0000012068357],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.92448235,0.00028557226,0.013436854,0.00015394106,0.00007902781,0.00031575,0.0013280903,0.0000016092263,0.010676539,0.000037649526,0.00009333973,0.04910929],"study_design_scores_gemma":[0.9780758,0.0028087809,0.013875197,0.0007463296,0.0002458586,0.0001391999,0.00029403757,0.000051108243,0.0026871797,0.00035045476,0.00066436676,0.000061692364],"about_ca_topic_score_codex":0.00013910398,"about_ca_topic_score_gemma":0.00010028067,"teacher_disagreement_score":0.05359346,"about_ca_system_score_codex":0.00005951188,"about_ca_system_score_gemma":0.00022862965,"threshold_uncertainty_score":0.49650303},"labels":[],"label_agreement":null},{"id":"W2143699484","doi":"10.1080/003655401750064077","title":"Comparison of PCR to Histology for the Diagnosis of Invasive Candidiasis in a Murine Model","year":2001,"lang":"en","type":"article","venue":"Scandinavian Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre","funders":"","keywords":"Histology; Fluconazole; Systemic candidiasis; Candida albicans; Biology; Corpus albicans; Pathology; Medicine; Antifungal; Microbiology","score_opus":0.042123059232323935,"score_gpt":0.35499737258549896,"score_spread":0.312874313353175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143699484","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941827,0.0029375188,0.0015930214,0.00057388155,0.00010659518,0.00043345988,0.00004285151,0.000004349833,0.0001256238],"genre_scores_gemma":[0.99892175,0.0007036544,0.00009913979,0.0001245703,0.00006195174,0.000033892586,0.000002521636,0.000010990452,0.000041509873],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998762,0.000050212195,0.0006608447,0.000120935634,0.00021594732,0.00019004504],"domain_scores_gemma":[0.99824023,0.0005619615,0.00041463668,0.00019495266,0.00040790727,0.00018028048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021051039,0.00011700763,0.0006715524,0.00025716974,0.00005218735,0.0000053291615,0.00011666904,0.000050246155,0.00006015169],"category_scores_gemma":[0.0012803542,0.000079976504,0.00028621452,0.00030922564,0.00015087513,0.00007377125,0.00002063315,0.00012861741,6.2642914e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001984462,0.00086989463,0.9895597,0.00020156508,0.0001098507,0.000024914869,0.0006312743,0.0015990392,0.00035819347,0.000049309267,0.0013298227,0.0032819647],"study_design_scores_gemma":[0.002372201,0.0020960555,0.99031425,0.00056443654,0.00042512955,0.000052601434,0.00095169747,0.00034619347,0.0020656576,0.00062803493,0.00009496758,0.00008880309],"about_ca_topic_score_codex":0.00021258222,"about_ca_topic_score_gemma":0.0015003477,"teacher_disagreement_score":0.0047390712,"about_ca_system_score_codex":0.00018861811,"about_ca_system_score_gemma":0.00030284128,"threshold_uncertainty_score":0.32613474},"labels":[],"label_agreement":null},{"id":"W2143712580","doi":"10.1128/ec.3.1.190-199.2004","title":"<i>Candida albicans</i> Lacking the Gene Encoding the Regulatory Subunit of Protein Kinase A Displays a Defect in Hyphal Formation and an Altered Localization of the Catalytic Subunit","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Medical Research Council Canada; Medical Research Council; Universidad de Buenos Aires; Agencia Nacional de Promoción Científica y Tecnológica; Consejo Nacional de Investigaciones Científicas y Técnicas","keywords":"Biology; Protein kinase A; Protein subunit; Candida albicans; Fusion protein; Mutant; Cyclin-dependent kinase complex; Molecular biology; Mitogen-activated protein kinase kinase; Cell biology; Biochemistry; Kinase; Gene; Genetics; Recombinant DNA","score_opus":0.013948206708435296,"score_gpt":0.24035294852488046,"score_spread":0.22640474181644515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143712580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967665,0.00044035105,0.0011785774,0.00018510895,0.000032801974,0.0008893764,0.000008152286,0.0000082439965,0.00049091],"genre_scores_gemma":[0.9996746,0.000026727892,0.00003870772,0.00010914743,0.00003646777,0.000013701732,0.000019021474,0.000012316733,0.00006930454],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99886477,0.00015149634,0.0003609451,0.00016487943,0.000283453,0.00017443163],"domain_scores_gemma":[0.9991094,0.00008712167,0.00018957825,0.0004947643,0.00007338038,0.000045764293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006488315,0.00011972646,0.00020407361,0.00004917663,0.00013166037,0.000012769771,0.00014822137,0.000052482985,0.000009856209],"category_scores_gemma":[0.000104936305,0.00006401101,0.000078263976,0.0003374698,0.0002662784,0.00013618775,0.000050148115,0.0001722084,9.2195603e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009489119,0.00073930173,0.81019986,0.0018274639,0.000054693788,0.000022651875,0.014637705,0.0044189403,0.16302516,0.00140636,0.000031942207,0.002687006],"study_design_scores_gemma":[0.0025153304,0.00032110262,0.76561177,0.0007148448,0.00019489821,0.000029087632,0.0024304267,0.0058766226,0.22143574,0.0006738491,0.000035293397,0.00016103085],"about_ca_topic_score_codex":0.0005812573,"about_ca_topic_score_gemma":0.0017172869,"teacher_disagreement_score":0.05841058,"about_ca_system_score_codex":0.000098490884,"about_ca_system_score_gemma":0.00014838942,"threshold_uncertainty_score":0.2610293},"labels":[],"label_agreement":null},{"id":"W2143989967","doi":"10.1046/j.1365-2958.2000.01953.x","title":"Signature‐tagged and directed mutagenesis identify PABA synthetase as essential for <i>Aspergillus fumigatus</i> pathogenicity","year":2000,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":145,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nexen (Canada)","funders":"Medical Research Council; Wellcome Trust","keywords":"Biology; Aspergillus fumigatus; In vivo; Pathogen; Mutagenesis; Gene; Microbiology; Mutant; Aspergillus; Human pathogen; Genetics","score_opus":0.004626007937703585,"score_gpt":0.25883540430094,"score_spread":0.2542093963632364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143989967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99345684,0.0037550873,0.00056133483,0.0003739475,0.00012942815,0.0008047173,0.0002984187,0.00012817586,0.00049203227],"genre_scores_gemma":[0.99527645,0.00023833006,0.0008181394,0.0016492681,0.00006931628,0.00004135671,0.0005287405,0.0000423637,0.0013360552],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99815404,0.00018725787,0.0003570985,0.00072980486,0.000081376464,0.00049039314],"domain_scores_gemma":[0.9990691,0.000100702135,0.000071371986,0.00044854244,0.00013559833,0.00017469327],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002643349,0.0002900331,0.0005505465,0.00007163849,0.00016111751,0.000022724194,0.00012336316,0.0003861268,0.0007828395],"category_scores_gemma":[0.00020613188,0.0002571828,0.00029250045,0.0001628252,0.00030171935,0.000040253017,0.000047316924,0.00022861917,0.00007038435],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011054812,0.00016810997,0.0008711633,0.00009350438,0.00017298649,0.000275485,0.00006254056,0.0000019759914,0.99184906,0.00006469889,0.0007270047,0.004607994],"study_design_scores_gemma":[0.0025237477,0.00041509792,0.0069294604,0.00006747163,0.00048339771,0.00045719804,0.00004502625,0.000050413215,0.9654933,0.00020581426,0.022907985,0.00042109232],"about_ca_topic_score_codex":0.000052229116,"about_ca_topic_score_gemma":0.00004116378,"teacher_disagreement_score":0.02635576,"about_ca_system_score_codex":0.000045971738,"about_ca_system_score_gemma":0.00009038683,"threshold_uncertainty_score":0.999988},"labels":[],"label_agreement":null},{"id":"W2144518381","doi":"10.1186/1471-2164-11-358","title":"Functional genomics of human bronchial epithelial cells directly interacting with conidia of Aspergillus fumigatus","year":2010,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; University of British Columbia; St. Paul's Hospital","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Michael Smith Health Research BC; Canadian Lung Association; National Sanitarium Association","keywords":"Aspergillus fumigatus; Biology; Microbiology; Conidium; Allergic bronchopulmonary aspergillosis; Cell sorting; Cell biology; Molecular biology; Immunology; Flow cytometry; Antibody; Genetics; Immunoglobulin E","score_opus":0.020286348607221547,"score_gpt":0.2567544042879455,"score_spread":0.23646805568072393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144518381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995816,0.00004903162,0.00058400293,0.000018618892,0.0005801622,0.00028384343,0.00007231797,0.000020410775,0.0025755991],"genre_scores_gemma":[0.9923995,0.000013974623,0.0064805457,0.00003321603,0.00039767264,0.0000036610634,0.000037344813,0.00003372954,0.0006003527],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987101,0.000030473406,0.0004958027,0.00029783594,0.00022428326,0.00024149677],"domain_scores_gemma":[0.9987425,0.00018089457,0.0003013555,0.0004234017,0.00022751342,0.00012433616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028672934,0.00017873646,0.0004563425,0.00007257591,0.000082901715,0.000010232488,0.00011655048,0.0001338713,0.00026245406],"category_scores_gemma":[0.00011475614,0.00015238975,0.00016458401,0.00008421183,0.0002846279,0.000057329657,0.000054837332,0.0003772338,0.000017247003],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013462338,0.00016728778,0.062652275,0.00014527643,0.000064768035,0.0000038014555,0.00040723372,0.000050915492,0.934008,0.0004295124,0.00008133085,0.0006433378],"study_design_scores_gemma":[0.0018249234,0.00048992614,0.16537885,0.000048374102,0.00014144983,0.000019697984,0.0005435334,0.00013738491,0.82949287,0.00008896914,0.0016455184,0.00018849304],"about_ca_topic_score_codex":0.00016918691,"about_ca_topic_score_gemma":0.0017868787,"teacher_disagreement_score":0.10451516,"about_ca_system_score_codex":0.00009277413,"about_ca_system_score_gemma":0.0005192868,"threshold_uncertainty_score":0.6214274},"labels":[],"label_agreement":null},{"id":"W2144610551","doi":"10.4103/0976-3147.158790","title":"Bilateral optic nerve infarction in rhino-cerebral mucormycosis: A rare magnetic resonance imaging finding","year":2015,"lang":"en","type":"article","venue":"Journal of Neurosciences in Rural Practice","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital","funders":"","keywords":"Mucormycosis; Medicine; Magnetic resonance imaging; Optic nerve; Optic neuropathy; Complication; Cerebral infarction; Cranial nerve disease; Radiology; Pathology; Surgery; Ischemia; Cardiology; Anatomy","score_opus":0.03556848692751479,"score_gpt":0.3352659074600861,"score_spread":0.2996974205325713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144610551","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904904,0.0029386156,0.000021180655,0.004440112,0.0011475685,0.00016814316,9.701124e-7,0.000009418194,0.000783596],"genre_scores_gemma":[0.99744487,0.0001696081,0.0012870299,0.00071645004,0.00013540157,0.000002293209,3.4875916e-7,0.000009422169,0.00023457537],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99755967,0.0003083739,0.0007469175,0.0002341107,0.0007858647,0.00036503992],"domain_scores_gemma":[0.9985589,0.00034618354,0.00044562644,0.00018091883,0.00026679755,0.00020160234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00211362,0.0001469674,0.0003264549,0.00038356625,0.000067610854,0.0001171322,0.00023941298,0.000051266285,0.000019273739],"category_scores_gemma":[0.0063252905,0.00011365944,0.00010438368,0.00091739255,0.00018089719,0.0027624678,0.00006356924,0.0007747953,0.000006470345],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019436041,0.00038634636,0.97567314,0.000043499596,0.0000024791427,0.003048436,0.0011444408,0.00018285813,0.010860325,0.00004899378,0.00035159578,0.0063143014],"study_design_scores_gemma":[0.0026596077,0.0014014583,0.9724451,0.0006582837,0.000051350384,0.006127285,0.0069528767,0.0070130094,0.0002952211,0.00025393043,0.0019507236,0.00019116096],"about_ca_topic_score_codex":0.0001843719,"about_ca_topic_score_gemma":0.000035748682,"teacher_disagreement_score":0.010565104,"about_ca_system_score_codex":0.00026982074,"about_ca_system_score_gemma":0.00038340696,"threshold_uncertainty_score":0.757242},"labels":[],"label_agreement":null},{"id":"W2144728717","doi":"10.1128/iai.70.6.3156-3163.2002","title":"Uptake of<i>Aspergillus fumigatus</i>Conidia by Phagocytic and Nonphagocytic Cells In Vitro: Quantitation Using Strains Expressing Green Fluorescent Protein","year":2002,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":187,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada; Simon Fraser University","keywords":"Biology; Aspergillus fumigatus; Microbiology; Conidium; In vitro; Green fluorescent protein; Fluorescence; Fungi imperfecti; Aspergillus; Aspergillosis; Fluorescent protein; Immunology; Biochemistry; Botany; Gene","score_opus":0.03426539306173962,"score_gpt":0.27403459609191044,"score_spread":0.23976920303017082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144728717","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99770784,0.0011065622,0.00038067964,0.000029061464,0.000056693178,0.0004158731,0.000016363321,0.000025744199,0.00026117216],"genre_scores_gemma":[0.99909514,0.00029380867,0.00042076726,0.00003233057,0.00001699999,0.0000053946883,0.00001228236,0.000012858419,0.000110423054],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989676,0.00012335756,0.00035736652,0.0002042745,0.00015299708,0.00019443182],"domain_scores_gemma":[0.99949026,0.0000337772,0.00011030433,0.00019054482,0.000085133404,0.00008996382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028318775,0.0001470708,0.0002911563,0.000119599164,0.00013930723,0.000028950382,0.000027853417,0.000107664004,0.000044918284],"category_scores_gemma":[0.00009871254,0.00014027042,0.00005134812,0.00020316041,0.00018045056,0.00023350967,0.00002797948,0.0002761912,0.0000026780249],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001434026,0.00027465733,0.010046255,0.00034281905,0.000018323326,0.000004683061,0.0007400098,0.000004591027,0.97609186,0.000013749506,0.00001199687,0.012307674],"study_design_scores_gemma":[0.0036623653,0.0004847168,0.24180177,0.0006285219,0.00010066615,0.000031573712,0.00072422606,0.016741714,0.7351202,0.00006239577,0.00033968617,0.0003021658],"about_ca_topic_score_codex":0.002430993,"about_ca_topic_score_gemma":0.00012380423,"teacher_disagreement_score":0.24097164,"about_ca_system_score_codex":0.000120311706,"about_ca_system_score_gemma":0.00004008398,"threshold_uncertainty_score":0.57200617},"labels":[],"label_agreement":null},{"id":"W2144737284","doi":"10.1091/mbc.e11-08-0729","title":"Cdc28 provides a molecular link between Hsp90, morphogenesis, and cell cycle progression in<i>Candida albicans</i>","year":2011,"lang":"en","type":"article","venue":"Molecular Biology of the Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Cell biology; Hsp90; Cell Cycle Protein; Cyclin-dependent kinase 1; Cytokinesis; Cell cycle; Morphogenesis; Mitosis; Regulator; Heat shock protein; Corpus albicans; Cell division; Cell; Microbiology; Biochemistry","score_opus":0.01185972820800632,"score_gpt":0.261482268007423,"score_spread":0.2496225397994167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144737284","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913683,0.0038188302,0.00059058896,0.00040872014,0.000044546767,0.00063228694,0.000013526174,0.000018616105,0.0031045917],"genre_scores_gemma":[0.9973115,0.0000946892,0.0020620152,0.00027981217,0.000023996523,0.000020320544,0.000014329208,0.00002344856,0.0001699337],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99857014,0.0002015512,0.00034514992,0.00041902336,0.00014378813,0.00032033963],"domain_scores_gemma":[0.9990645,0.0000365752,0.00015684539,0.00056926935,0.00006298968,0.00010978979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002987762,0.0002013751,0.0004171972,0.00007325435,0.000050856448,0.0000040519913,0.00022916605,0.00023834666,0.000032460626],"category_scores_gemma":[0.000060142112,0.00013579281,0.00015550514,0.00018308613,0.0004430729,0.000022272348,0.0001679555,0.00022955987,0.0000051983557],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013445517,0.00009811452,0.3394851,0.00015239678,0.000020172554,0.00003350767,0.0001337029,6.0381876e-7,0.65765893,0.000037467005,0.000012467478,0.0022330333],"study_design_scores_gemma":[0.0008662942,0.00035249925,0.119484976,0.00009611395,0.00010626602,0.000004506633,0.000051721385,0.000013058608,0.8774405,0.0011264753,0.00032444682,0.00013311031],"about_ca_topic_score_codex":0.00017221631,"about_ca_topic_score_gemma":0.00002083759,"teacher_disagreement_score":0.22000015,"about_ca_system_score_codex":0.000027192913,"about_ca_system_score_gemma":0.00010442614,"threshold_uncertainty_score":0.553747},"labels":[],"label_agreement":null},{"id":"W2145028525","doi":"10.1128/iai.00685-10","title":"Interaction of <i>Candida albicans</i> Cell Wall Als3 Protein with <i>Streptococcus gordonii</i> SspB Adhesin Promotes Development of Mixed-Species Communities","year":2010,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":215,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Dental and Craniofacial Research; National Institutes of Health","keywords":"Streptococcus gordonii; Candida albicans; Bacterial adhesin; Microbiology; Corpus albicans; Biofilm; Hypha; Mutant; Biology; Cell biology; Chemistry; Bacteria; Biochemistry; Virulence; Gene; Genetics","score_opus":0.015756316037548148,"score_gpt":0.24985445931227906,"score_spread":0.2340981432747309,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145028525","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947041,0.000044992015,0.00016662177,0.00005177858,0.00006941403,0.0005818686,0.0000070946353,0.000036383408,0.0043377266],"genre_scores_gemma":[0.99855775,0.000043264175,0.0006785855,0.00002819089,0.000015423846,0.000039709375,0.000032401687,0.00001246798,0.000592212],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990657,0.00008674648,0.00039537612,0.000119639466,0.00018586183,0.00014666753],"domain_scores_gemma":[0.99894404,0.00008652129,0.00024009081,0.00035845477,0.00030439263,0.00006650112],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037661564,0.00016111723,0.00033604723,0.00009987436,0.00019038942,0.000017125683,0.00006280821,0.000099258235,0.00020358416],"category_scores_gemma":[0.00005413333,0.0001245412,0.00005979682,0.00015668945,0.00035921496,0.00016473474,0.000048779908,0.00050854293,0.0000026417592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045271555,0.00062144233,0.3624979,0.0004788765,0.000050822757,6.287897e-7,0.001912711,3.9964755e-7,0.6294885,0.000054685854,0.00003641747,0.004404863],"study_design_scores_gemma":[0.0006424437,0.00045509095,0.41016477,0.00021059798,0.00003113217,0.0000066633143,0.0013958046,0.0000070177266,0.5814412,0.000014869439,0.0055343355,0.00009604881],"about_ca_topic_score_codex":0.0022547666,"about_ca_topic_score_gemma":0.009050351,"teacher_disagreement_score":0.048047297,"about_ca_system_score_codex":0.000037244445,"about_ca_system_score_gemma":0.0001840986,"threshold_uncertainty_score":0.50786424},"labels":[],"label_agreement":null},{"id":"W2145050746","doi":"10.1128/aem.02711-06","title":"Metal Ions May Suppress or Enhance Cellular Differentiation in <i>Candida albicans</i> and <i>Candida tropicalis</i> Biofilms","year":2007,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"Adobe Systems","keywords":"Biofilm; Candida tropicalis; Candida albicans; Microbiology; Hypha; Yeast; Biology; Metal ions in aqueous solution; Corpus albicans; Metal; Cell wall; Chemistry; Bacteria; Biochemistry; Genetics","score_opus":0.005648766019734745,"score_gpt":0.2231924261214635,"score_spread":0.21754366010172876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145050746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979351,0.0006538429,0.00026758105,0.00014076062,0.00005470541,0.00035736623,0.00008153547,0.000015857313,0.00049325643],"genre_scores_gemma":[0.9977507,0.0005933018,0.00021108406,0.00054708455,0.00004566609,0.000015265634,0.00032569584,0.000015276797,0.0004958966],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987827,0.000029381152,0.00030634602,0.00046060455,0.00005648039,0.00036449227],"domain_scores_gemma":[0.99954855,0.000081293794,0.000059569094,0.00018240079,0.0000021987569,0.00012597028],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013787654,0.00020135235,0.00036818514,0.000062214756,0.00008357964,0.00000858484,0.000052910786,0.0001853196,0.00026863205],"category_scores_gemma":[0.0000058176033,0.0001532366,0.000042752978,0.00006520751,0.00044422265,0.000035598103,0.00007400901,0.00020422132,0.000011839713],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005393025,0.00017135039,0.1132293,0.000033383792,0.000026863956,0.00002170358,0.0001420658,1.554246e-7,0.88374203,0.00010822569,0.000054539098,0.0019310571],"study_design_scores_gemma":[0.0024365985,0.00029054028,0.45974433,0.000027559465,0.000101930425,0.00007641362,0.0010074108,0.000005578523,0.52886945,0.00006733584,0.007074543,0.0002983095],"about_ca_topic_score_codex":0.000058537975,"about_ca_topic_score_gemma":0.00023449973,"teacher_disagreement_score":0.35487258,"about_ca_system_score_codex":0.00006142109,"about_ca_system_score_gemma":0.000011468874,"threshold_uncertainty_score":0.62488073},"labels":[],"label_agreement":null},{"id":"W2145373085","doi":"10.1139/w05-050","title":"The effect of farnesol on amino acid incorporation by a wild-type and cell-wall variant strain of<i>Candida albicans</i>","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Farnesol; Candida albicans; Quorum sensing; Yeast; Strain (injury); Corpus albicans; Morphogenesis; Biology; Amino acid; Microbiology; Biochemistry; Cell wall; Chemistry; Virulence; Gene; Anatomy","score_opus":0.0051138788794904974,"score_gpt":0.21367005141172662,"score_spread":0.20855617253223613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145373085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958072,0.0024272413,0.000031096508,0.0011339542,0.000096260505,0.00015378953,0.0000865775,0.0000011482481,0.00026273273],"genre_scores_gemma":[0.9991966,0.00011340428,0.000075674274,0.0003261569,0.00005623453,5.1697833e-7,0.000022509563,0.0000072258035,0.00020170957],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913824,0.00012803424,0.00038717475,0.000107104184,0.00004628377,0.00019319194],"domain_scores_gemma":[0.99902356,0.00016717934,0.00030651494,0.00014662789,0.00015295636,0.00020315037],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058922276,0.00010508373,0.00035336267,0.00008398187,0.00006520251,0.0000058901146,0.00009955192,0.00011569482,0.000049566854],"category_scores_gemma":[0.00018057748,0.00006598637,0.0000617326,0.00010306336,0.00031124032,0.000029083767,0.0000050252415,0.00022265958,0.0000022268623],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006815212,0.000019045172,0.03091523,0.000047046084,0.00006531943,0.000037708764,0.00017598404,0.0000043615582,0.95543617,0.000049078775,0.0067506824,0.00581784],"study_design_scores_gemma":[0.0077822725,0.020069595,0.062472116,0.00047364144,0.0005435627,0.0015600066,0.00048429958,0.000036496625,0.7300247,0.00010690903,0.17603837,0.00040801615],"about_ca_topic_score_codex":0.00080718583,"about_ca_topic_score_gemma":0.015590635,"teacher_disagreement_score":0.22541147,"about_ca_system_score_codex":0.00009041806,"about_ca_system_score_gemma":0.00064713415,"threshold_uncertainty_score":0.86999404},"labels":[],"label_agreement":null},{"id":"W2145804339","doi":"10.1186/gb-2007-8-4-r52","title":"Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes","year":2007,"lang":"en","type":"article","venue":"Genome biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":173,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Biology; Human genetics; Candida albicans; Genome Biology; Genome; Genetics; Computational biology; Personal genomics; Evolutionary biology; Genomics; Gene","score_opus":0.015804406806813148,"score_gpt":0.27448831840964966,"score_spread":0.2586839116028365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145804339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880761,0.0010519915,0.00010082633,0.0034324834,0.000177063,0.0004920564,0.0000447997,0.00001911622,0.006605582],"genre_scores_gemma":[0.9962973,0.00011072388,0.00006218445,0.0017753084,0.00024110857,0.000010162226,0.00003801029,0.000015785756,0.0014494227],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985561,0.00013851751,0.00038430412,0.0003351609,0.00017001411,0.000415936],"domain_scores_gemma":[0.99859416,0.00032631593,0.00010414688,0.00076545397,0.00011183075,0.00009810784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081602496,0.0001805314,0.00040261535,0.0000633596,0.00016511355,0.0000056048975,0.0003490266,0.00018584012,0.0005835418],"category_scores_gemma":[0.00022203826,0.00008857384,0.0001945446,0.0002480783,0.0004997769,0.000022069682,0.00008840486,0.00017164156,0.000056906076],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027270315,0.00009617488,0.1061573,0.000035625962,0.00011972863,0.000009831109,0.00086696795,4.414575e-7,0.88819236,0.0033975428,0.00016214873,0.0006891573],"study_design_scores_gemma":[0.000515743,0.0005812516,0.92686915,0.00002266194,0.00006200508,0.00000968959,0.0006033606,0.0000014071716,0.026237758,0.00055932906,0.044397973,0.0001396432],"about_ca_topic_score_codex":0.0004925524,"about_ca_topic_score_gemma":0.0013473408,"teacher_disagreement_score":0.8619546,"about_ca_system_score_codex":0.00013577641,"about_ca_system_score_gemma":0.00016430633,"threshold_uncertainty_score":0.63893735},"labels":[],"label_agreement":null},{"id":"W2146648542","doi":"10.1111/myc.12036","title":"Pharmacoeconomic assessment of therapy for invasive aspergillosis","year":2013,"lang":"en","type":"review","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Voriconazole; Caspofungin; Posaconazole; Aspergillosis; Intensive care medicine; Medicine; Antifungal; Empiric therapy; Amphotericin B; Cost effectiveness; Immunology; Dermatology; Pathology","score_opus":0.13006731915203928,"score_gpt":0.45290353677761275,"score_spread":0.32283621762557346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146648542","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0019948843,0.9925708,0.000026433685,0.000030150288,0.00017492434,0.0029498828,0.00017696292,0.000023235832,0.002052684],"genre_scores_gemma":[0.0019578582,0.99456877,0.00093569624,0.00013726662,0.0001910732,0.0005663204,0.0001767634,0.000049916744,0.0014163535],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99857956,0.00006316701,0.00063406763,0.00037293456,0.00013267146,0.0002175896],"domain_scores_gemma":[0.9984184,0.0005577749,0.00037213802,0.00041667683,0.00014210911,0.000092895665],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021951985,0.0003058748,0.0020008471,0.000108034175,0.000040464536,0.0000133831545,0.00015947103,0.00018099572,0.0010320967],"category_scores_gemma":[0.00008850072,0.00020930142,0.0008914768,0.000082268685,0.00007351702,0.00005674212,0.000029119039,0.00017743702,0.00005044081],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030327777,0.00021696264,0.0010917779,0.02638077,0.0006495826,0.0000022454954,0.000013205159,6.102676e-8,0.00013791119,0.00011006652,0.006918879,0.9644482],"study_design_scores_gemma":[0.00065643474,0.00033834364,0.00091737614,0.0047395825,0.0008451142,0.0000041253047,0.000023183447,0.000002995008,0.0002706342,0.000034112953,0.99196494,0.00020316754],"about_ca_topic_score_codex":0.000023193761,"about_ca_topic_score_gemma":0.0000057923753,"teacher_disagreement_score":0.985046,"about_ca_system_score_codex":0.00016824681,"about_ca_system_score_gemma":0.0008517013,"threshold_uncertainty_score":0.9998811},"labels":[],"label_agreement":null},{"id":"W2146788195","doi":"10.1007/s00134-008-1339-6","title":"Management of invasive candidiasis and candidemia in adult non-neutropenic intensive care unit patients: Part II. Treatment","year":2008,"lang":"en","type":"review","venue":"Intensive Care Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":115,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University Health Network","funders":"","keywords":"Fluconazole; Medicine; Intensive care medicine; Intensive care unit; Invasive candidiasis; Anesthesiology; Fungemia; Azole; Antifungal; Empiric therapy; Intensive care; Neutropenia; Internal medicine; Chemotherapy; Anesthesia; Dermatology; Pathology","score_opus":0.04429612571815758,"score_gpt":0.3371978511101961,"score_spread":0.2929017253920385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146788195","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08095056,0.912572,0.0000010223152,0.00021813613,0.00051072397,0.0039625275,0.0002966048,0.000025675892,0.001462729],"genre_scores_gemma":[0.070823506,0.9248046,0.000021982058,0.001359302,0.00017660421,0.00029966654,0.0019461584,0.000089905836,0.00047825696],"study_design_codex":"design_other","study_design_gemma":"qualitative","domain_scores_codex":[0.99578124,0.00017541146,0.0016409917,0.0011345119,0.0006511879,0.0006166835],"domain_scores_gemma":[0.983432,0.0003548444,0.0007182072,0.000979858,0.014122885,0.00039221218],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000081504884,0.0010175768,0.0049266294,0.000603239,0.00012969057,0.0000066003067,0.00023209219,0.0004724185,0.000069973896],"category_scores_gemma":[0.0020039398,0.0006754628,0.0005481555,0.0006842454,0.0008395158,0.000076813056,0.0002503081,0.0006720504,0.000015197434],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00097043725,0.00016856335,0.06388856,0.075071484,0.0025431197,0.005206894,0.03521042,4.8669745e-7,0.0000016926791,0.00004986038,0.009277459,0.80761105],"study_design_scores_gemma":[0.011100167,0.0077887904,0.021037493,0.24098015,0.007974273,0.00020920046,0.37579873,7.297542e-7,0.00004668013,0.000006030344,0.33402693,0.0010308102],"about_ca_topic_score_codex":0.0030001637,"about_ca_topic_score_gemma":0.0027273525,"teacher_disagreement_score":0.80658025,"about_ca_system_score_codex":0.0017151113,"about_ca_system_score_gemma":0.000812177,"threshold_uncertainty_score":0.99956965},"labels":[],"label_agreement":null},{"id":"W2147038676","doi":"10.1148/rg.292075143","title":"Invasive Aspergillosis of the Brain: Radiologic-Pathologic Correlation","year":2009,"lang":"en","type":"review","venue":"Radiographics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Medicine; Aspergillosis; Radiology; Pathology; Immunology","score_opus":0.051636245007542034,"score_gpt":0.3290840486482283,"score_spread":0.2774478036406863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147038676","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00058524305,0.99540627,0.00007265028,0.0002309031,0.00027424973,0.0012875535,0.000047158097,0.00005283751,0.0020431376],"genre_scores_gemma":[0.0047775833,0.9938727,0.00023196921,0.00038726281,0.00013898381,0.000023160512,0.00010548598,0.000028791816,0.00043404242],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99753445,0.00043693365,0.0008168768,0.0005037669,0.00041232494,0.00029563898],"domain_scores_gemma":[0.9972853,0.0007333865,0.0006646011,0.0010579416,0.00015984746,0.00009889898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064218725,0.00041582252,0.0020679478,0.00032009586,0.0001281326,0.000010540687,0.00036420312,0.0008040979,0.00003485332],"category_scores_gemma":[0.0013054117,0.00022958024,0.002194534,0.0016991212,0.00049354957,0.000043073982,0.000053075804,0.00088606915,0.000009542787],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008714858,0.0004464302,0.05241489,0.023869894,0.0007656087,0.00018041818,0.00017648625,0.0000049159744,0.000018547124,0.003695853,0.009778076,0.9085617],"study_design_scores_gemma":[0.0005891027,0.0007517228,0.047371972,0.020666612,0.00434776,0.0005409152,0.000060035243,0.000009652416,0.000006162134,0.00093422504,0.92413676,0.0005850693],"about_ca_topic_score_codex":0.000006201814,"about_ca_topic_score_gemma":0.000014977517,"teacher_disagreement_score":0.9143587,"about_ca_system_score_codex":0.00010101731,"about_ca_system_score_gemma":0.0004146922,"threshold_uncertainty_score":0.93620104},"labels":[],"label_agreement":null},{"id":"W2147549735","doi":"10.1128/iai.00359-15","title":"Evolution of the Immune Response to Chronic Airway Colonization with Aspergillus fumigatus Hyphae","year":2015,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Christie (Canada); McGill University Health Centre; McGill University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Aspergillus fumigatus; Biology; Immune system; Microbiology; Immunology; Proinflammatory cytokine; Chemokine; Lung; Cytokine; Inflammation; Medicine","score_opus":0.014746727876513717,"score_gpt":0.26264492948956564,"score_spread":0.24789820161305193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147549735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966502,0.0004697263,0.00094723975,0.00041613143,0.00014056954,0.00033556117,0.0000027694612,0.000029504292,0.0010082556],"genre_scores_gemma":[0.9990983,0.000029715233,0.000031247622,0.000051479365,0.000028242786,0.0000075138546,0.0000036478207,0.0000070930982,0.00074274593],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99922425,0.00022408232,0.00016086921,0.00010450057,0.00018107673,0.00010522492],"domain_scores_gemma":[0.99922097,0.000041705684,0.00006805652,0.00031495493,0.00027295123,0.00008138757],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063199474,0.00007840753,0.00014901017,0.00005906846,0.00014123647,0.000008849021,0.00003922496,0.00006296265,0.000026793468],"category_scores_gemma":[0.00048183525,0.000050739854,0.00003774911,0.00034928232,0.000138571,0.00008560868,0.000045376655,0.00016397315,0.000010103851],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009899412,0.00031569292,0.79402244,0.000105616,0.00005423729,0.0000018385523,0.0011542854,0.00023040983,0.19016093,0.00038193553,0.00025652465,0.0034167084],"study_design_scores_gemma":[0.0011134937,0.0013861802,0.9764808,0.00008908558,0.000035333745,0.000022950024,0.00020851396,0.00010589109,0.017929206,0.00003076344,0.0025384813,0.00005929784],"about_ca_topic_score_codex":0.0010323543,"about_ca_topic_score_gemma":0.00057935365,"teacher_disagreement_score":0.18245839,"about_ca_system_score_codex":0.0003989676,"about_ca_system_score_gemma":0.00036818194,"threshold_uncertainty_score":0.20691113},"labels":[],"label_agreement":null},{"id":"W2147683631","doi":"10.1128/jcm.01677-09","title":"Caspofungin Etest Endpoint for <i>Aspergillus</i> Isolates Shows Poor Agreement with the Reference Minimum Effective Concentration","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; Alberta Hospital Edmonton","funders":"","keywords":"Etest; Caspofungin; Broth microdilution; Agar dilution; Agar; Microbiology; Aspergillus fumigatus; Aspergillus flavus; Serial dilution; Aspergillus niger; Echinocandin; Aspergillus; Aspergillus terreus; Biology; Medicine; Antifungal; Minimum inhibitory concentration; Amphotericin B; Food science; Bacteria; Antimicrobial; Pathology","score_opus":0.03357997742727065,"score_gpt":0.35489107994646224,"score_spread":0.3213111025191916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147683631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.985431,0.0006625918,0.0019846272,0.010507818,0.00024797543,0.00074749306,0.000036123158,0.0000071064537,0.0003752614],"genre_scores_gemma":[0.9932247,0.00015356726,0.0009981184,0.0049271877,0.00038849952,0.0000044315175,0.000017958893,0.0000067861183,0.0002787549],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99821866,0.00024802066,0.0009670297,0.00023056481,0.000068750116,0.00026698076],"domain_scores_gemma":[0.9968557,0.0016607081,0.0006317839,0.00019694654,0.0005299828,0.00012491761],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016350853,0.00015641956,0.0007060835,0.000024891628,0.00007729557,0.000012295636,0.00014587396,0.0001937272,0.00006989189],"category_scores_gemma":[0.00085585733,0.00007740364,0.00028807574,0.000071343566,0.00026217735,0.00006051428,0.000013440558,0.00053362054,0.000008475627],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.028702943,0.0011898978,0.056366626,0.000076127035,0.0005212969,0.00007651231,0.00028173634,0.000013548583,0.8614002,0.0005614039,0.018927023,0.031882696],"study_design_scores_gemma":[0.022324497,0.07855498,0.63727367,0.000752012,0.0015178274,0.0012711046,0.0011778933,0.00019661876,0.06471208,0.0009525395,0.19059713,0.0006696549],"about_ca_topic_score_codex":0.0000023306768,"about_ca_topic_score_gemma":0.00005749332,"teacher_disagreement_score":0.79668814,"about_ca_system_score_codex":0.00005863972,"about_ca_system_score_gemma":0.00022595719,"threshold_uncertainty_score":0.31564286},"labels":[],"label_agreement":null},{"id":"W2148196105","doi":"10.1099/00221287-147-4-869","title":"Differences in sialic acid density in pathogenic and non-pathogenic Aspergillus species","year":2001,"lang":"en","type":"article","venue":"Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Aspergillus fumigatus; Conidium; Sialic acid; Microbiology; Biochemistry; Agglutinin; Chemistry; Lectin; Peanut agglutinin; Biology; Botany","score_opus":0.01810759523233182,"score_gpt":0.24095350983613154,"score_spread":0.2228459146037997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148196105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971247,0.0016719433,0.000028858243,0.00031173517,0.00009709605,0.00022852045,0.0000143108045,0.000015314648,0.00050752464],"genre_scores_gemma":[0.9977914,0.0009485099,0.0001027675,0.00032648564,0.00005269179,0.0000062920226,0.000029357208,0.000008096038,0.00073436997],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99881387,0.0001003842,0.00029203616,0.00039753408,0.00003768249,0.0003584988],"domain_scores_gemma":[0.9995819,0.000054362954,0.000043361782,0.00022802081,0.000030116382,0.00006228195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025091504,0.00015765635,0.00048077642,0.0001320721,0.000038108028,0.0000070270567,0.000078586854,0.00019462063,0.00016777574],"category_scores_gemma":[0.00009422885,0.00012771688,0.0000645631,0.00020838913,0.00024514037,0.00003378525,0.00006637999,0.0002327626,0.00003631379],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001603924,0.00005710203,0.5011222,0.000013800214,0.000005550938,0.00014998316,0.00014687912,2.9299436e-8,0.4977637,0.00001537307,0.000019361878,0.0005456723],"study_design_scores_gemma":[0.0011283258,0.00019706166,0.98966044,0.000044544937,0.000014037374,0.00021768331,0.0002459322,0.0000081395165,0.0077221226,0.00006986789,0.00056419853,0.00012766226],"about_ca_topic_score_codex":0.000120017234,"about_ca_topic_score_gemma":0.0066576023,"teacher_disagreement_score":0.49004155,"about_ca_system_score_codex":0.00008528054,"about_ca_system_score_gemma":0.00006197129,"threshold_uncertainty_score":0.5208143},"labels":[],"label_agreement":null},{"id":"W2148832775","doi":"10.1128/jcm.01556-09","title":"<i>Neosartorya udagawae</i> ( <i>Aspergillus udagawae</i> ), an Emerging Agent of Aspergillosis: How Different Is It from <i>Aspergillus fumigatus</i> ?","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Aspergillus fumigatus; Gliotoxin; Virulence; Aspergillosis; Microbiology; Biology; Aspergillus; Pathogen; Conidium; Incubation; Immunology; Gene; Genetics; Biochemistry","score_opus":0.0744101158253094,"score_gpt":0.385098373834652,"score_spread":0.31068825800934263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148832775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9777306,0.0035495474,0.00027217274,0.015414268,0.0017786729,0.00033349654,0.00019943339,0.0000344333,0.0006873987],"genre_scores_gemma":[0.9795581,0.0033531713,0.001268462,0.01361407,0.0014717914,0.0000017470182,0.00008101011,0.00004678533,0.00060487294],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9934631,0.0007572113,0.0037055132,0.0008451204,0.00043425724,0.0007948186],"domain_scores_gemma":[0.9942765,0.00072369626,0.0021500336,0.0010724338,0.0009411302,0.0008362066],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013815523,0.0006177394,0.0031702837,0.00020898247,0.00013209309,0.00003629154,0.0007012624,0.0008426797,0.0007716247],"category_scores_gemma":[0.0010099463,0.00044446476,0.0018186228,0.00029405206,0.0006445827,0.00029439654,0.00011842069,0.0016300186,0.00003774411],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00564293,0.0037633046,0.2350536,0.00009602505,0.0009807799,0.0003647486,0.000550691,0.000008692265,0.6868404,0.000110528104,0.043217365,0.023370916],"study_design_scores_gemma":[0.024255436,0.027768316,0.50164795,0.0022872295,0.003186919,0.0013361571,0.0050097834,0.00015736891,0.14288965,0.0016209452,0.2878276,0.002012624],"about_ca_topic_score_codex":0.000034979697,"about_ca_topic_score_gemma":0.00011206311,"teacher_disagreement_score":0.54395074,"about_ca_system_score_codex":0.0001455138,"about_ca_system_score_gemma":0.0004158633,"threshold_uncertainty_score":0.9998007},"labels":[],"label_agreement":null},{"id":"W2148847026","doi":"10.1128/aac.49.11.4608-4615.2005","title":"Mechanisms of Azole Resistance in a Clinical Isolate of <i>Candida tropicalis</i>","year":2005,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":141,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministère des Transports","funders":"","keywords":"Biology; Efflux; Candida tropicalis; Rhodamine 123; Microbiology; Azole; Major facilitator superfamily; Gene; Yeast; Molecular biology; Drug resistance; Candida albicans; Mutant; Genetics; Multiple drug resistance; Antifungal","score_opus":0.015570669340384286,"score_gpt":0.30404208660567694,"score_spread":0.2884714172652927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148847026","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99607176,0.00008277032,0.00043297405,0.0023630417,0.000036988014,0.0001989544,0.00001439472,0.000008566006,0.0007905281],"genre_scores_gemma":[0.99032825,0.001446884,0.003219763,0.00429282,0.000041231757,0.0000011439129,0.0000037854968,0.000013010678,0.0006531281],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99884367,0.000025867454,0.00059663574,0.00023908689,0.00012209661,0.00017265894],"domain_scores_gemma":[0.99948394,0.000030368785,0.00014730716,0.00021880746,0.0000548901,0.00006467898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022721944,0.000114787224,0.00048246267,0.000046009056,0.000020522037,0.00000440349,0.00007084554,0.00011172019,0.00012430649],"category_scores_gemma":[0.000019387115,0.00009507986,0.00013294432,0.0001227214,0.00015803082,0.00004965158,0.000017373048,0.00012719053,0.00000242986],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005130148,0.001992989,0.70506275,0.0005239084,0.00015189436,0.000019645213,0.00074270135,0.0000012297302,0.2610028,0.00204114,0.01101479,0.012316032],"study_design_scores_gemma":[0.0047679762,0.00023253112,0.9389029,0.00030662294,0.000033131393,0.0000032007356,0.0000460562,0.00004132993,0.042887483,0.00045852058,0.012184192,0.00013606755],"about_ca_topic_score_codex":0.000038815506,"about_ca_topic_score_gemma":0.00021737238,"teacher_disagreement_score":0.23384017,"about_ca_system_score_codex":0.00001583813,"about_ca_system_score_gemma":0.000047531066,"threshold_uncertainty_score":0.3877244},"labels":[],"label_agreement":null},{"id":"W2149000422","doi":"10.1128/aac.01343-10","title":"Regulation of Efflux Pump Expression and Drug Resistance by the Transcription Factors Mrr1, Upc2, and Cap1 in Candida albicans","year":2011,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":138,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Deutsche Forschungsgemeinschaft","keywords":"Efflux; Candida albicans; Drug resistance; Drug; Transcription (linguistics); Microbiology; Transcription factor; Biology; Pharmacology; Chemistry; Biochemistry; Gene","score_opus":0.016473281475092052,"score_gpt":0.2362067818781674,"score_spread":0.21973350040307535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149000422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99825823,0.00024459907,0.000049533413,0.00075723015,0.000030935607,0.00029151674,0.000018733417,0.000008835477,0.00034039284],"genre_scores_gemma":[0.995699,0.0019584897,0.00010198932,0.00055609277,0.000014024429,0.0000023603914,0.000016615608,0.000012670509,0.0016387736],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99924535,0.000041645377,0.00022219862,0.00024441376,0.00010246129,0.00014395283],"domain_scores_gemma":[0.9996721,0.000022779139,0.00007341708,0.00014748874,0.00002869371,0.000055495995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001475002,0.00013242777,0.00023222172,0.000035212925,0.0000850443,0.000011776164,0.00004126319,0.00007489406,0.0000929424],"category_scores_gemma":[0.0000074665063,0.00008784154,0.00003420101,0.00007514271,0.00021188718,0.000090343405,0.000009316059,0.00009383205,1.9491807e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006259545,0.00012194643,0.52485204,0.00013898038,0.000020587815,9.840703e-7,0.007038,3.813089e-8,0.46002334,0.000025866697,0.006012049,0.0011402376],"study_design_scores_gemma":[0.0014688895,0.000040797877,0.86570626,0.00018365828,0.000021590295,0.0000020093912,0.00042624815,0.000008289634,0.12876731,0.00007322627,0.0032076382,0.00009405784],"about_ca_topic_score_codex":0.0006673723,"about_ca_topic_score_gemma":0.0005738286,"teacher_disagreement_score":0.34085426,"about_ca_system_score_codex":0.000017060514,"about_ca_system_score_gemma":0.000016535432,"threshold_uncertainty_score":0.3582074},"labels":[],"label_agreement":null},{"id":"W2149095341","doi":"10.1128/ec.00219-06","title":"Production of Tyrosol by <i>Candida albicans</i> Biofilms and Its Role in Quorum Sensing and Biofilm Development","year":2006,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":245,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Tyrosol; Farnesol; Biofilm; Quorum sensing; Microbiology; Candida albicans; Hypha; Biology; Yeast; Biochemistry; Corpus albicans; Chemistry; Bacteria; Genetics","score_opus":0.005823519772646664,"score_gpt":0.20858141696742083,"score_spread":0.20275789719477416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149095341","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944324,0.0029494087,0.000021086815,0.00029682132,0.00006249932,0.00028806104,0.000004201729,0.000016378006,0.0019291831],"genre_scores_gemma":[0.99594325,0.00011977797,0.00067727745,0.00005825402,0.000035271103,0.0000015507866,0.000023348637,0.0000112692305,0.0031299843],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990112,0.000025744965,0.00028901693,0.00030417967,0.00015966473,0.00021016726],"domain_scores_gemma":[0.9996706,0.000025665402,0.00006654762,0.0001290926,0.00004439148,0.000063684376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020130145,0.00012255956,0.00024334296,0.000064724976,0.000046397046,0.000007905509,0.000022093065,0.000065525404,0.000018464865],"category_scores_gemma":[0.000029182374,0.000109353074,0.000019460545,0.00015210111,0.00007678911,0.0000498289,0.000025932022,0.00010385724,0.0000039919714],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011234941,0.000158725,0.55342627,0.00024856292,0.0000061301316,0.000009449525,0.00021831298,0.0000016973545,0.44210654,0.000008916262,0.0008983004,0.0028047562],"study_design_scores_gemma":[0.0006573034,0.000077004006,0.5753758,0.00011121828,0.000021384803,0.0000129484815,0.00027229916,0.00015505015,0.42263293,0.000022326905,0.0005455039,0.00011620419],"about_ca_topic_score_codex":0.00034313928,"about_ca_topic_score_gemma":0.0003804382,"teacher_disagreement_score":0.021949563,"about_ca_system_score_codex":0.000044126158,"about_ca_system_score_gemma":0.00007878757,"threshold_uncertainty_score":0.4459289},"labels":[],"label_agreement":null},{"id":"W2149546447","doi":"10.1086/341401","title":"A Double‐Blind, Randomized, Controlled Trial of Amphotericin B Colloidal Dispersion versus Amphotericin B for Treatment of Invasive Aspergillosis in Immunocompromised Patients","year":2002,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":332,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"Claude Pepper Older Americans Independence Center, Wake Forest School of Medicine; University of Arkansas for Medical Sciences; East Carolina University; City of Hope; University of Arkansas; Case Western Reserve University; University of Nebraska Medical Center","keywords":"Medicine; Chills; Aspergillosis; Amphotericin B; Toxicity; Nephrotoxicity; Internal medicine; Gastroenterology; Discontinuation; Surgery; Immunology","score_opus":0.06492221653561432,"score_gpt":0.36330207330038317,"score_spread":0.29837985676476886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149546447","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9854559,0.00075259147,0.000024201032,0.000050401184,0.00070336426,0.012524416,0.00008440266,0.000030228859,0.00037451158],"genre_scores_gemma":[0.9957042,0.0026608973,0.000024216488,0.000050921368,0.0001317328,0.0011545137,0.00008031768,0.000024416264,0.00016879653],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99646515,0.0004093869,0.0020562683,0.000464733,0.0003222498,0.0002822369],"domain_scores_gemma":[0.9932011,0.00503528,0.00074772915,0.00043618405,0.00037372112,0.00020602375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047304842,0.00030278342,0.0034974378,0.00017898522,0.000061523344,0.000011854748,0.00009073298,0.00020244178,0.00016287573],"category_scores_gemma":[0.0038156528,0.00020905984,0.0020801486,0.00027284824,0.0004934335,0.000073348885,0.000028160306,0.00008047761,0.0000064955643],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.8263398,0.016082423,0.1544292,0.00013445632,0.0007027123,0.000004385621,0.00012012272,0.000007177673,0.00027022162,0.000014918048,0.000043500335,0.0018511191],"study_design_scores_gemma":[0.9466331,0.015319439,0.03531695,0.00015248095,0.0015123865,1.811021e-7,0.00007148974,0.00028067868,0.00048754775,0.00003540277,0.000026832296,0.00016353678],"about_ca_topic_score_codex":0.00019877253,"about_ca_topic_score_gemma":0.00014587192,"teacher_disagreement_score":0.120293304,"about_ca_system_score_codex":0.00023423212,"about_ca_system_score_gemma":0.00016555157,"threshold_uncertainty_score":0.8525213},"labels":[],"label_agreement":null},{"id":"W2149924150","doi":"10.1128/jcm.43.8.4288-4292.2005","title":"Peritonitis Due to<i>Curvularia inaequalis</i>in an Elderly Patient Undergoing Peritoneal Dialysis and a Review of Six Cases of Peritonitis Associated with Other<i>Curvularia</i>spp","year":2005,"lang":"en","type":"review","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Peritonitis; Curvularia; Peritoneal dialysis; Continuous ambulatory peritoneal dialysis; Medicine; Surgery; Microbiology; Internal medicine; Biology","score_opus":0.07542404217463887,"score_gpt":0.4129495257850946,"score_spread":0.3375254836104557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149924150","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10979145,0.88821167,0.00003461309,0.00022478995,0.00025324515,0.00092140405,0.00050233654,0.000007734754,0.00005279208],"genre_scores_gemma":[0.039649457,0.9575803,0.0016070136,0.0006203721,0.00033818095,0.0000136554845,0.00010291665,0.00006155387,0.000026499787],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9896627,0.0028252057,0.00607444,0.0006568291,0.00029273852,0.00048809568],"domain_scores_gemma":[0.98876905,0.004623012,0.004497467,0.0006033038,0.0011027647,0.00040439586],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0034649398,0.0005979143,0.009012816,0.0003865679,0.00005805197,0.000019695379,0.00034632688,0.00093955884,0.00021632177],"category_scores_gemma":[0.008109705,0.00041758383,0.0014417811,0.00059066113,0.0006539185,0.00014086247,0.00011552413,0.0015188352,0.0000030437784],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019659926,0.0033960338,0.01469277,0.06248515,0.0025976223,0.0019219151,0.0004277143,0.000003618784,0.00037383143,0.000039456438,0.00034923712,0.9117467],"study_design_scores_gemma":[0.003719563,0.025721628,0.0044892016,0.37163016,0.007649669,0.0051142033,0.00035246112,0.0000023466057,0.000025218225,0.000013132906,0.58034354,0.0009388917],"about_ca_topic_score_codex":0.00011785992,"about_ca_topic_score_gemma":0.0019342758,"teacher_disagreement_score":0.9108078,"about_ca_system_score_codex":0.00021153559,"about_ca_system_score_gemma":0.002057635,"threshold_uncertainty_score":0.9998276},"labels":[],"label_agreement":null},{"id":"W2149987266","doi":"10.1128/ec.4.7.1203-1210.2005","title":"Release from Quorum-Sensing Molecules Triggers Hyphal Formation during <i>Candida albicans</i> Resumption of Growth","year":2005,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":147,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Farnesol; Quorum sensing; Biology; Candida albicans; Cell biology; Hypha; Schizosaccharomyces pombe; Morphogenesis; Microbiology; Corpus albicans; Psychological repression; Gene; Gene expression; Mutant; Genetics; Biochemistry; Virulence","score_opus":0.008982315350419049,"score_gpt":0.22460892825059767,"score_spread":0.21562661290017862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149987266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908068,0.000602043,0.0017559052,0.0004092496,0.000075226926,0.00025057033,0.000020039151,0.0000547525,0.0060253907],"genre_scores_gemma":[0.9958268,0.00020967402,0.0027859106,0.0001910796,0.00018680484,0.0000013978373,0.00007866226,0.000020138825,0.0006995665],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99859065,0.000060865903,0.00046951804,0.00026863505,0.00035232218,0.0002579826],"domain_scores_gemma":[0.9991836,0.00008423433,0.00016910062,0.00031778213,0.00010939235,0.00013590664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016479394,0.00015648262,0.00030491425,0.0000928429,0.000085511514,0.0000125285305,0.00006539629,0.00009229301,0.00015056146],"category_scores_gemma":[0.00011098008,0.00014585878,0.00014517596,0.00015384915,0.00008301435,0.00020748026,0.000024247227,0.00018204591,0.00006721215],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0051513873,0.0009785417,0.24522339,0.0012358503,0.00011856733,0.00019957473,0.0025576805,0.00022944149,0.7244969,0.00013997522,0.0039447346,0.015723977],"study_design_scores_gemma":[0.0030795538,0.00014256978,0.54329425,0.00025483547,0.00017820927,0.00001647184,0.0004993828,0.0032661927,0.44871005,0.0001636486,0.00016882225,0.00022600472],"about_ca_topic_score_codex":0.00031404026,"about_ca_topic_score_gemma":0.00013310961,"teacher_disagreement_score":0.29807088,"about_ca_system_score_codex":0.0001682363,"about_ca_system_score_gemma":0.00007064869,"threshold_uncertainty_score":0.59479487},"labels":[],"label_agreement":null},{"id":"W2150296897","doi":"10.1146/annurev.micro.56.012302.160907","title":"Evolution of Drug Resistance in <i>Candida Albicans</i>","year":2002,"lang":"en","type":"review","venue":"Annual Review of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Candida albicans; Drug resistance; Pathogen; Biology; Antifungal drug; Population; Human pathogen; Antifungal drugs; Resistance (ecology); Drug; Antibiotic resistance; Microbiology; Genetics; Antibiotics; Ecology; Medicine; Pharmacology; Environmental health; Bacteria","score_opus":0.016185068896093977,"score_gpt":0.3137845854582928,"score_spread":0.2975995165621988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150296897","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000031235155,0.9947823,0.000006383467,0.0001116471,0.00010726475,0.0013163096,0.00055570994,0.000010555588,0.0030785622],"genre_scores_gemma":[0.00012143764,0.9955744,0.00024053564,0.0002029896,0.00004850696,0.00003781734,0.00026880146,0.000029278523,0.003476223],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99647856,0.0005233277,0.0019680152,0.0005532433,0.00012014842,0.00035669684],"domain_scores_gemma":[0.99754155,0.00028484865,0.0010211235,0.00077761535,0.00030281354,0.00007206513],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009452782,0.0003965956,0.004726456,0.000206966,0.000017442411,9.805535e-7,0.00030506504,0.00036001552,0.0003879827],"category_scores_gemma":[0.00056994223,0.0002937103,0.00089542056,0.00067638827,0.0004001075,0.00004026276,0.0000762454,0.00050178636,0.00005552602],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006639291,0.00030770528,0.00017220926,0.76676005,0.00014274173,0.000030765856,0.000084282525,6.0780967e-9,0.00012693887,0.00039464494,0.044243116,0.18767117],"study_design_scores_gemma":[0.00019216981,0.00006070883,0.000032832166,0.2515895,0.00052383286,0.00003247325,0.000017343047,1.0370809e-8,0.0000070886,0.000013971167,0.74738246,0.00014760553],"about_ca_topic_score_codex":0.00005799904,"about_ca_topic_score_gemma":0.0002885756,"teacher_disagreement_score":0.7031393,"about_ca_system_score_codex":0.00028242508,"about_ca_system_score_gemma":0.00057291077,"threshold_uncertainty_score":0.9999515},"labels":[],"label_agreement":null},{"id":"W2150328671","doi":"10.1186/1471-2180-9-25","title":"A Candida albicans early stage biofilm detachment event in rich medium","year":2009,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of General Medical Sciences; National Institutes of Health","keywords":"Biology; Candida albicans; Biofilm; Microbiology; Parasitology; Event (particle physics); Zoology; Bacteria; Genetics","score_opus":0.01612765873335166,"score_gpt":0.2934012863035282,"score_spread":0.27727362757017654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150328671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965814,0.00053668366,0.00029912413,0.0008372052,0.00012666883,0.00042340904,0.000038803704,0.000036029738,0.0011207279],"genre_scores_gemma":[0.99396074,0.000061024948,0.0005896792,0.00110294,0.00006665657,0.00001023289,0.000069421745,0.000008574805,0.0041307257],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998601,0.0001077096,0.00036910502,0.00040130608,0.00006558912,0.00045526205],"domain_scores_gemma":[0.999353,0.000060027356,0.000070069495,0.000354804,0.000047804962,0.00011430023],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031594152,0.00017030432,0.0004012598,0.0001161202,0.000037771926,0.000006141973,0.00011573616,0.00017932523,0.0004909504],"category_scores_gemma":[0.00008588611,0.00013628213,0.00009976848,0.00018853006,0.0001045474,0.000029029572,0.000027651711,0.00023296564,0.00010671018],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041380242,0.0002499155,0.6167351,0.00003535057,0.000015222681,0.0000551251,0.0002501262,0.000002027255,0.38089678,0.00012555261,0.00086719263,0.0003538225],"study_design_scores_gemma":[0.001574197,0.0007253288,0.97376424,0.000050925475,0.000027004626,0.000032556396,0.00016863532,0.000007928674,0.013142561,0.000051924715,0.010292786,0.00016193592],"about_ca_topic_score_codex":0.00037233523,"about_ca_topic_score_gemma":0.0040620137,"teacher_disagreement_score":0.36775422,"about_ca_system_score_codex":0.00019688177,"about_ca_system_score_gemma":0.0002767425,"threshold_uncertainty_score":0.55574244},"labels":[],"label_agreement":null},{"id":"W2150895069","doi":"10.1111/j.1365-2958.2010.07504.x","title":"The zinc cluster transcription factor Ahr1p directs Mcm1p regulation of <i>Candida albicans</i> adhesion","year":2010,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Regulon; Biology; Transcription factor; Chromatin immunoprecipitation; Candida albicans; Promoter; Cell biology; Transcription preinitiation complex; Biofilm; Zinc finger transcription factor; Zinc finger; Microbiology; Gene; Genetics; Gene expression","score_opus":0.006251891389045463,"score_gpt":0.23856773955748087,"score_spread":0.2323158481684354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150895069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958132,0.00035571973,0.0010378596,0.0011086512,0.00032864034,0.0003764934,0.000024456394,0.000027459299,0.0009275369],"genre_scores_gemma":[0.9981494,0.000041091633,0.0003886406,0.00047397253,0.000045428507,0.000007976215,0.00008293602,0.000016097605,0.0007944365],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990235,0.00008908847,0.00030091158,0.00027011274,0.00007812004,0.00023828051],"domain_scores_gemma":[0.9992149,0.00006592817,0.00010240228,0.00042608392,0.00013077757,0.00005992804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023033899,0.00013634354,0.0002528159,0.000042235897,0.00010011521,0.000007916506,0.000105013256,0.00022549467,0.0001432925],"category_scores_gemma":[0.00010771289,0.00009087419,0.00016131232,0.000103538216,0.00028784166,0.00003186284,0.00002143205,0.00026081232,0.000018569703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039911782,0.000054460605,0.0045257066,0.00003488307,0.000030714586,0.0000040402483,0.000082474915,4.4684447e-7,0.99113256,0.000434841,0.00042204058,0.0028786864],"study_design_scores_gemma":[0.00085131737,0.00021574162,0.06958798,0.000029908995,0.000056274137,0.00003962636,0.000029111434,0.000015658565,0.89049435,0.00018129572,0.038389385,0.000109364715],"about_ca_topic_score_codex":0.000039210914,"about_ca_topic_score_gemma":0.0002891195,"teacher_disagreement_score":0.100638255,"about_ca_system_score_codex":0.000027278824,"about_ca_system_score_gemma":0.00006348912,"threshold_uncertainty_score":0.3705742},"labels":[],"label_agreement":null},{"id":"W2151082945","doi":"10.1086/429921","title":"Antifungal Therapy Decreases Sensitivity of theAspergillus Galactomannan Enzyme Immunoassay","year":2005,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":467,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Institutes of Health","keywords":"Galactomannan; Medicine; Cutoff; Internal medicine; Immunoassay; Aspergillosis; Gastroenterology; Immunology; Antibody","score_opus":0.03511773815214957,"score_gpt":0.3596905477872771,"score_spread":0.3245728096351275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151082945","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920035,0.0036065534,0.00023244084,0.00031511637,0.00024148166,0.00043187063,0.00006466036,0.00023045378,0.0028739143],"genre_scores_gemma":[0.99562,0.0022603401,0.000034220273,0.001019207,0.0006344375,0.00001132595,0.000040131108,0.000034802713,0.00034554504],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972883,0.00056590885,0.0008722113,0.000517527,0.0003814548,0.000374621],"domain_scores_gemma":[0.9966942,0.0014959086,0.00024844302,0.0007587554,0.00034906878,0.00045364085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00094625034,0.00027649448,0.0008800618,0.00008639965,0.00013292278,0.000022447417,0.00008871735,0.0002011295,0.00066051574],"category_scores_gemma":[0.0026898878,0.00021429647,0.0008224871,0.00023686793,0.0006711489,0.00017288185,0.00005740904,0.00032780942,0.00010095117],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00087314384,0.0039210226,0.9473253,0.00006033962,0.0002247169,0.000053464795,0.000021806807,0.0000070761616,0.0033373346,0.00016920989,0.0016838366,0.04232277],"study_design_scores_gemma":[0.0023677158,0.0008280953,0.98944044,0.000114744755,0.00018849412,0.000019825979,0.0000370775,0.00025658964,0.0031428325,0.00014985168,0.0032345832,0.00021976266],"about_ca_topic_score_codex":0.00009456406,"about_ca_topic_score_gemma":0.0001237653,"teacher_disagreement_score":0.04211515,"about_ca_system_score_codex":0.00006858997,"about_ca_system_score_gemma":0.00034662388,"threshold_uncertainty_score":0.8738756},"labels":[],"label_agreement":null},{"id":"W2152045008","doi":"10.1111/jvp.12208","title":"Pharmacokinetics and distribution of voriconazole in body fluids of dogs after repeated oral dosing","year":2015,"lang":"en","type":"article","venue":"Journal of Veterinary Pharmacology and Therapeutics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"North Carolina State University; Pfizer","keywords":"Pharmacokinetics; Dosing; Voriconazole; Synovial fluid; Cerebrospinal fluid; Pharmacology; Distribution (mathematics); Plasma concentration; Chemistry; Volume of distribution; Oral administration; Medicine; Anesthesia; Internal medicine; Pathology","score_opus":0.053266833979576045,"score_gpt":0.36989669194967423,"score_spread":0.3166298579700982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152045008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99421066,0.0050293207,0.00017076472,0.00023453822,0.00020746588,0.000099140554,0.000012006808,0.0000026704367,0.00003341163],"genre_scores_gemma":[0.997308,0.0021972645,0.00021078356,0.00019798997,0.00005756223,9.571999e-7,0.00000331689,0.0000064815995,0.000017646751],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990115,0.00013566257,0.0004934819,0.00009289313,0.0001399109,0.00012651412],"domain_scores_gemma":[0.9993158,0.00006325213,0.00022005057,0.00006149394,0.00024112739,0.00009827602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059564185,0.00009844403,0.00037184416,0.0000808532,0.000014711187,0.000003067121,0.00004302181,0.00008573472,0.00001987947],"category_scores_gemma":[0.00001558186,0.00007927498,0.00005039633,0.00011359763,0.00022286826,0.00009140227,0.000034841618,0.00021024063,1.3317131e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011550801,0.000416232,0.34824815,0.00015835861,0.00017566665,0.00025539522,0.00044248055,0.0000043585255,0.6353392,0.0000097132215,0.00006927537,0.0033303245],"study_design_scores_gemma":[0.011435941,0.007816325,0.8862468,0.00021953664,0.0009302901,0.0011539347,0.0003044423,0.001251306,0.08510577,0.00027509278,0.005093034,0.0001675081],"about_ca_topic_score_codex":0.0000046704054,"about_ca_topic_score_gemma":7.406901e-7,"teacher_disagreement_score":0.5502335,"about_ca_system_score_codex":0.00003959095,"about_ca_system_score_gemma":0.00008443252,"threshold_uncertainty_score":0.323274},"labels":[],"label_agreement":null},{"id":"W2152128067","doi":"","title":"Vaginal yeast infections during pregnancy.","year":2009,"lang":"en","type":"article","venue":"PubMed","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Pregnancy; Medicine; Candida glabrata; Candida albicans; Candida tropicalis; Vulvovaginal Candidiasis; Vaginitis; Vaginal disease; Dermatology; Obstetrics; Internal medicine; Vagina; Gynecology; Antifungal; Biology; Microbiology; Surgery","score_opus":0.018411717047859787,"score_gpt":0.2489660471343431,"score_spread":0.2305543300864833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152128067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9534217,0.00032459,0.00008399788,0.0008547456,0.00008555807,0.0004242935,0.0000023850314,0.000106872794,0.044695843],"genre_scores_gemma":[0.9922097,0.00003946128,0.00003969503,0.00010990209,0.00011448789,0.00010868022,0.0000029108687,0.0000051244656,0.0073700896],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99934095,0.000010692534,0.00011005622,0.00015924229,0.00012930091,0.000249753],"domain_scores_gemma":[0.999603,0.0000064999767,0.000021607371,0.00020146405,0.000039701234,0.0001277526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000051745337,0.00006790255,0.000116560375,0.000044875862,0.000070362024,0.000011571161,0.000032520864,0.000038652397,0.00005040614],"category_scores_gemma":[0.00009564174,0.0000589068,0.00006250492,0.00013495733,0.00002961382,0.000075177086,0.0000075552866,0.00011768367,0.000031677977],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016862436,0.0005553544,0.79897976,0.00010079234,0.000037086153,0.00012595647,0.00010505431,0.0000015509893,0.0017567214,0.0005603849,0.0006472299,0.1969615],"study_design_scores_gemma":[0.00046998658,0.00003601354,0.9969794,0.000038222126,0.000025481224,0.000036880432,0.000014301202,0.0000020019684,0.0011672175,0.00016027363,0.0010118921,0.00005829321],"about_ca_topic_score_codex":0.00000606911,"about_ca_topic_score_gemma":0.000015493828,"teacher_disagreement_score":0.1979997,"about_ca_system_score_codex":0.000062199746,"about_ca_system_score_gemma":0.000020848725,"threshold_uncertainty_score":0.24021497},"labels":[],"label_agreement":null},{"id":"W2152275986","doi":"10.1128/ec.4.1.95-102.2005","title":"Cyclin Cln3p Links G <sub>1</sub> Progression to Hyphal and Pseudohyphal Development in <i>Candida albicans</i>","year":2005,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Stanford Bio-X; Natural Sciences and Engineering Research Council of Canada; Burroughs Wellcome Fund","keywords":"Biology; Hypha; Candida albicans; Cell cycle; Cell biology; Cyclin; Yeast; Corpus albicans; Cell growth; Cell Cycle Protein; Cell; Microbiology; Genetics","score_opus":0.009521632120324603,"score_gpt":0.26138974599344694,"score_spread":0.25186811387312236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152275986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929389,0.0007234425,0.00036930168,0.0013266738,0.000102240694,0.00069632754,0.0000030376582,0.000058347912,0.0037817457],"genre_scores_gemma":[0.9907477,0.000108288055,0.006466782,0.001396406,0.00020646695,0.000033020635,0.0000195048,0.000029564686,0.0009922793],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979722,0.000052780415,0.0005068977,0.0005579282,0.00040643942,0.0005037372],"domain_scores_gemma":[0.99908566,0.00007716335,0.00006497966,0.00031241553,0.00006021334,0.00039955124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044063828,0.00024979436,0.0004030952,0.00013750042,0.000093431474,0.000025232666,0.000101148464,0.00021578859,0.00009375755],"category_scores_gemma":[0.00007901413,0.00021469228,0.00006257386,0.00026365262,0.000083261904,0.000091861984,0.00009785506,0.00048429708,0.0002396203],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006784881,0.00080057175,0.7385073,0.000215266,0.000015596026,0.00013735582,0.0011492241,0.000017639528,0.055811558,0.000014519303,0.0018625938,0.2007899],"study_design_scores_gemma":[0.0020558746,0.0002627393,0.82780224,0.00030688973,0.000030631818,0.000026753893,0.00012757607,0.00016235736,0.16328949,0.000014263171,0.005640298,0.00028086713],"about_ca_topic_score_codex":0.000016875169,"about_ca_topic_score_gemma":0.00047665887,"teacher_disagreement_score":0.20050903,"about_ca_system_score_codex":0.00020831115,"about_ca_system_score_gemma":0.0002692692,"threshold_uncertainty_score":0.8754897},"labels":[],"label_agreement":null},{"id":"W2152277109","doi":"10.1128/iai.01510-07","title":"<i>Aspergillus fumigatus</i> Stimulates Leukocyte Adhesion Molecules and Cytokine Production by Endothelial Cells In Vitro and during Invasive Pulmonary Disease","year":2008,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; National Institutes of Health; American Heart Association","keywords":"Aspergillus fumigatus; Biology; Endothelial stem cell; Cell adhesion molecule; Immunology; Cytokine; Tumor necrosis factor alpha; Microbiology; Cell biology; In vitro; Biochemistry","score_opus":0.010750056761416986,"score_gpt":0.22737073947107084,"score_spread":0.21662068270965384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152277109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980325,0.001293341,0.000009730798,0.00010272833,0.000072769704,0.00030860933,0.00002608061,0.000041733107,0.00011250394],"genre_scores_gemma":[0.9921717,0.0073515573,0.000024356583,0.000067968234,0.000046721318,0.000009412755,0.00003794169,0.000011938326,0.00027837305],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99916804,0.00009935144,0.00019033327,0.00027243674,0.0001118658,0.00015795192],"domain_scores_gemma":[0.99953926,0.000049601487,0.000049876457,0.00016311702,0.00005527283,0.00014288454],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012577667,0.00014824556,0.0002104328,0.00009075688,0.00028996475,0.0000144145515,0.00001693017,0.00006870769,0.000009745914],"category_scores_gemma":[0.00018207259,0.0001335597,0.000032284457,0.00011857426,0.00022868377,0.0002060962,0.000051377956,0.00024756338,0.0000019978925],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001600741,0.0001640315,0.21195959,0.0001835671,0.000008251438,0.000039436483,0.00016360832,0.0000040643413,0.7850635,0.0000012538187,0.000020180589,0.000791783],"study_design_scores_gemma":[0.00069046015,0.00007454693,0.5563213,0.000058801303,0.000020349325,0.00007224213,0.000052576168,0.000064752516,0.44240877,0.000023384096,0.00012532195,0.00008748966],"about_ca_topic_score_codex":0.00070690096,"about_ca_topic_score_gemma":0.000057337205,"teacher_disagreement_score":0.34436172,"about_ca_system_score_codex":0.00005763777,"about_ca_system_score_gemma":0.000045017503,"threshold_uncertainty_score":0.5446407},"labels":[],"label_agreement":null},{"id":"W2152394730","doi":"10.1091/mbc.e02-05-0272","title":"Transcription Profiling of<i>Candida albicans</i>Cells Undergoing the Yeast-to-Hyphal Transition","year":2002,"lang":"en","type":"article","venue":"Molecular Biology of the Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":374,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Marine Biosciences; Biotechnology Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Germ tube; Hypha; Transcription (linguistics); Fungal protein; Virulence; Cell biology; Gene; Yeast; Microarray analysis techniques; Transcription factor; Saccharomyces cerevisiae; Microbiology; Molecular biology; Genetics; Gene expression","score_opus":0.012379071199783593,"score_gpt":0.24023522070284345,"score_spread":0.22785614950305985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152394730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98154116,0.0007104804,0.014096989,0.0015356059,0.000118749245,0.0004221438,0.000016078438,0.0000099774,0.0015488007],"genre_scores_gemma":[0.998395,0.00005111177,0.00066355744,0.00062666327,0.000022531745,0.0000057887783,0.0000057717575,0.000010108695,0.00021942361],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991783,0.000112411966,0.000236157,0.00018472366,0.00012359023,0.00016480465],"domain_scores_gemma":[0.9994469,0.000037762893,0.000076297656,0.00034149323,0.000057127872,0.00004040748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002071754,0.000100528916,0.00021132844,0.000033397417,0.000058173242,0.0000022705733,0.00014434278,0.00009349791,0.000075033975],"category_scores_gemma":[0.000025311643,0.000059199992,0.00020754024,0.0001568332,0.00021285914,0.000013122443,0.000014624492,0.00014034027,0.000008280489],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000099396,0.000092898714,0.0012676329,0.00010021208,0.000028249753,0.000002084612,0.00039153275,0.000082007304,0.9971762,0.0001594139,0.00006809643,0.0005323131],"study_design_scores_gemma":[0.00050106394,0.00022955364,0.00150631,0.000059113685,0.00010761054,0.0000041425633,0.00018285653,0.00021627848,0.9966174,0.0003183858,0.00019716697,0.00006011714],"about_ca_topic_score_codex":0.000027221346,"about_ca_topic_score_gemma":0.000020485246,"teacher_disagreement_score":0.016853867,"about_ca_system_score_codex":0.000021811822,"about_ca_system_score_gemma":0.000031091404,"threshold_uncertainty_score":0.24141057},"labels":[],"label_agreement":null},{"id":"W2152951316","doi":"10.4021/jocmr536w","title":"Septic Shock Due to Candidemia: Outcomes and Predictors of Shock Development","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Medicine Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Fungemia; Septic shock; Medicine; Fluconazole; Bacteremia; Shock (circulatory); Internal medicine; Intensive care medicine; Intensive care unit; Blood culture; Concomitant; Antibiotics; Sepsis; Mycosis; Surgery; Antifungal; Microbiology; Biology","score_opus":0.2922933836319103,"score_gpt":0.516135098815702,"score_spread":0.22384171518379165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152951316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906013,0.0006508158,0.00020956346,0.0038325246,0.00035532005,0.00034178063,0.0000013954237,0.0000063364523,0.004000974],"genre_scores_gemma":[0.9948622,0.00041638807,0.0024619482,0.00039474224,0.0005380911,0.000003295137,7.374494e-7,0.000016736874,0.001305836],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9945967,0.00041345795,0.0024960395,0.00027232885,0.0017989861,0.0004224651],"domain_scores_gemma":[0.9939278,0.002703445,0.00038719387,0.0003606685,0.0014974584,0.0011234287],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.013708807,0.00015547735,0.001515979,0.00041573896,0.000071103386,0.000004362534,0.00025889787,0.00021182474,0.00045048437],"category_scores_gemma":[0.021718163,0.00008967111,0.00018459556,0.00040078445,0.00072936155,0.00007700259,0.00013828844,0.001413838,0.0000146779075],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002043561,0.00035902168,0.9744818,0.00023450333,0.00024813597,0.0003179631,0.0013623862,1.1649966e-7,0.00027708503,0.00004896529,0.0074778497,0.0131485965],"study_design_scores_gemma":[0.0024496366,0.0046568816,0.9862021,0.0010106442,0.00010110615,0.000088615285,0.0011672305,0.000004910009,0.0006356098,0.00024303213,0.0033681868,0.00007203647],"about_ca_topic_score_codex":0.00007689232,"about_ca_topic_score_gemma":0.00009062953,"teacher_disagreement_score":0.01307656,"about_ca_system_score_codex":0.000092580165,"about_ca_system_score_gemma":0.0011325325,"threshold_uncertainty_score":0.9865223},"labels":[],"label_agreement":null},{"id":"W2153482254","doi":"10.1093/jpids/piu074","title":"A Prospective, International Cohort Study of Invasive Mold Infections in Children","year":2014,"lang":"en","type":"article","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Institute of General Medical Sciences","keywords":"Medicine; Prospective cohort study; Cohort; Cohort study; Intensive care medicine; Internal medicine","score_opus":0.003876282180253029,"score_gpt":0.24371606200471838,"score_spread":0.23983977982446536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153482254","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99825746,0.00011599683,0.00006565401,0.00006710635,0.00035006742,0.0006714211,0.000010214177,0.000013116412,0.00044894966],"genre_scores_gemma":[0.99889004,0.0003175928,0.000017008128,0.00008864145,0.00060706795,0.000012859147,0.0000013899994,0.000011340749,0.000054075008],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99853724,0.00012170297,0.00052213576,0.0001554528,0.0005241069,0.00013938766],"domain_scores_gemma":[0.9985226,0.0001672651,0.00051858096,0.00023942403,0.00046009847,0.00009202351],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044005382,0.00012225314,0.0003630691,0.00011048995,0.00009767335,0.000014821518,0.00015884511,0.00006384767,0.000037753358],"category_scores_gemma":[0.0010270765,0.000083025625,0.0005276846,0.0005569234,0.000071119495,0.00013034389,0.00007539821,0.00038523073,0.0000017145858],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006808381,0.0031664523,0.9949589,0.000035370813,0.0003403682,0.00000139444,0.0004030939,0.00022844624,0.000032567274,0.000017638396,0.00069879135,0.000048926213],"study_design_scores_gemma":[0.002763497,0.00066904025,0.9949893,0.000023467403,0.00067592476,0.00015944512,0.0003122322,0.000036802347,0.000007031335,0.00028653615,0.0000056120803,0.00007115442],"about_ca_topic_score_codex":0.00012553623,"about_ca_topic_score_gemma":0.00009282865,"teacher_disagreement_score":0.002695413,"about_ca_system_score_codex":0.00029376766,"about_ca_system_score_gemma":0.0003183569,"threshold_uncertainty_score":0.33856866},"labels":[],"label_agreement":null},{"id":"W2153623185","doi":"10.1111/j.1399-3062.2005.00107.x","title":"<i>Candida dubliniensis</i> bloodstream infection: a fatal case in a lung transplant recipient","year":2005,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Manitoba","funders":"","keywords":"Candida dubliniensis; Medicine; Candida albicans; Bloodstream infection; Opportunistic infection; Epidemiology; Human immunodeficiency virus (HIV); Immunology; Microbiology; Intensive care medicine; Corpus albicans; Viral disease; Pathology; Biology","score_opus":0.010811670793766744,"score_gpt":0.264753132914418,"score_spread":0.2539414621206512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153623185","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99351877,0.0006535669,0.00064133795,0.00046592572,0.00021875458,0.0008914527,0.00042118752,0.00029177841,0.0028972123],"genre_scores_gemma":[0.99745303,0.00094022346,0.000047724756,0.0006796078,0.00029112256,0.000105833285,0.00021586921,0.00004140677,0.00022518057],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99755883,0.0001114686,0.0006377302,0.0006737129,0.0003932584,0.00062500907],"domain_scores_gemma":[0.9984712,0.00011072736,0.000080295664,0.00050096685,0.00008631613,0.0007505082],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030057217,0.00039394008,0.000525886,0.0003077288,0.00019405808,0.0000411448,0.000067143934,0.00016220158,0.00043297088],"category_scores_gemma":[0.0000422455,0.00035740738,0.00036241056,0.0005117966,0.00013406527,0.00026399887,0.000010292094,0.000493648,0.000082427585],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026808,0.0022218213,0.9713428,0.0006242138,0.0001166005,0.018901965,0.0009388894,0.00022086148,0.00043673455,0.00017664155,0.0002987237,0.0020399261],"study_design_scores_gemma":[0.013856386,0.0007040951,0.9584226,0.0013965402,0.0018201726,0.013535917,0.000081852115,0.003670449,0.0013843297,0.00009670269,0.0039254245,0.001105538],"about_ca_topic_score_codex":0.0010355762,"about_ca_topic_score_gemma":0.009301053,"teacher_disagreement_score":0.01292023,"about_ca_system_score_codex":0.0002729462,"about_ca_system_score_gemma":0.00034349752,"threshold_uncertainty_score":0.99988776},"labels":[],"label_agreement":null},{"id":"W2153708939","doi":"10.1128/ec.3.6.1423-1432.2004","title":"<i>KRE5</i>Gene Null Mutant Strains of<i>Candida albicans</i>Are Avirulent and Have Altered Cell Wall Composition and Hypha Formation Properties","year":2004,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Candida albicans; Biology; Saccharomyces cerevisiae; Mutant; Biochemistry; Corpus albicans; Cell wall; Spheroplast; Glucan; Molecular biology; Endoplasmic reticulum; Gene; Microbiology; Escherichia coli","score_opus":0.017677399839176,"score_gpt":0.22451350888350155,"score_spread":0.20683610904432556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153708939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954709,0.0015456522,0.0006278489,0.00042799473,0.000059211405,0.0006277745,0.000045893517,0.00003351306,0.0011612105],"genre_scores_gemma":[0.9980049,0.000500116,0.00070322596,0.00032651355,0.000053920452,0.000008436534,0.00006050281,0.000019980163,0.00032241154],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986985,0.0000343613,0.00041106797,0.00030914284,0.0002872587,0.00025968472],"domain_scores_gemma":[0.9992824,0.000022481185,0.00016815768,0.00026105184,0.000104072846,0.00016182492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016623427,0.00020716377,0.0003794859,0.000068962974,0.00010529821,0.000026413174,0.00005689742,0.00008870556,0.000033368055],"category_scores_gemma":[0.0000115037465,0.00016825802,0.00007194243,0.00007266475,0.00019188816,0.00017305292,0.00003989055,0.00016206487,0.00000932578],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007577375,0.00085894647,0.0642961,0.0020817427,0.000036961665,0.00005966714,0.0048150662,0.00006179202,0.9258868,0.00003085419,0.00011549944,0.0009987956],"study_design_scores_gemma":[0.004611948,0.0007654087,0.34358,0.00049668655,0.00022163922,0.00007701911,0.0017041152,0.000699229,0.6473084,0.00014271481,0.00009779191,0.00029501074],"about_ca_topic_score_codex":0.00020737246,"about_ca_topic_score_gemma":0.00015060598,"teacher_disagreement_score":0.2792839,"about_ca_system_score_codex":0.00010884471,"about_ca_system_score_gemma":0.000084269595,"threshold_uncertainty_score":0.68613625},"labels":[],"label_agreement":null},{"id":"W2153830782","doi":"10.1007/s00247-003-1095-2","title":"Reply to Hoffer: The radiological spectrum of invasive aspergillosis in children: a 10-year review","year":2004,"lang":"en","type":"review","venue":"Pediatric Radiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Neuroradiology; Aspergillosis; Radiological weapon; Pediatrics; Radiology; Neurology; Psychiatry; Immunology","score_opus":0.02756540660063152,"score_gpt":0.316262815254651,"score_spread":0.2886974086540195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153830782","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021614882,0.99221236,0.000005907272,0.0012923265,0.00014637188,0.0034512666,0.000068435234,0.00003493505,0.00062692707],"genre_scores_gemma":[0.001149666,0.99554855,0.00013771758,0.0016014354,0.0008890393,0.0002058333,0.00014681435,0.00004580068,0.0002751759],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9955818,0.00081220927,0.001653552,0.0010085771,0.00031027783,0.00063356286],"domain_scores_gemma":[0.9968669,0.00093291735,0.0005947634,0.0013024668,0.00008440051,0.00021859093],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014002916,0.00057330786,0.004617134,0.00036697165,0.000056361692,0.0000054085895,0.0006318848,0.0005533179,0.00063842535],"category_scores_gemma":[0.0037113277,0.00032544203,0.0011072843,0.001501849,0.00025801628,0.000027104601,0.00015924608,0.0010046005,0.00029271826],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071088807,0.0012335053,0.43720335,0.25701827,0.001527585,0.0006785205,0.00023703936,0.000006115368,0.0000015162408,0.001544945,0.13417733,0.16566096],"study_design_scores_gemma":[0.0019842018,0.0033150248,0.1462252,0.036974758,0.008838741,0.002938129,0.00002849947,1.9285886e-7,0.0000013639302,0.00038786881,0.79800117,0.0013048389],"about_ca_topic_score_codex":0.00008354245,"about_ca_topic_score_gemma":0.000013962897,"teacher_disagreement_score":0.66382384,"about_ca_system_score_codex":0.00041972104,"about_ca_system_score_gemma":0.0013018922,"threshold_uncertainty_score":0.9999198},"labels":[],"label_agreement":null},{"id":"W2154769022","doi":"10.1111/j.1365-2710.2010.01166.x","title":"Invasive fungal infections: epidemiology and analysis of antifungal prescriptions in onco-haematology","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Pharmacy and Therapeutics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Aspergillosis; Internal medicine; Medicine; Fluconazole; Hematology; Incidence (geometry); Voriconazole; Cryptococcosis; Epidemiology; Mycosis; Caspofungin; Surgery; Antifungal; Immunology; Dermatology","score_opus":0.1604591265566883,"score_gpt":0.49452988184000674,"score_spread":0.3340707552833184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154769022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99582666,0.0017672515,0.0002986031,0.0013831009,0.000377215,0.00011413126,0.000010666736,0.000004040462,0.00021834216],"genre_scores_gemma":[0.9880862,0.009783753,0.0007338532,0.0012183056,0.0001384238,0.0000010224225,0.0000023066,0.0000061543574,0.000029963967],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99732673,0.0004548741,0.0017455166,0.00017825811,0.00012254978,0.00017209633],"domain_scores_gemma":[0.99480206,0.0038334918,0.0007194269,0.00017176205,0.00028524693,0.00018803222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031963692,0.00011343606,0.0013179769,0.00031858362,0.000044767265,0.000005019975,0.000071565104,0.0001685474,0.0000936885],"category_scores_gemma":[0.002596369,0.00008302463,0.00033671042,0.00034061537,0.0005914431,0.00011236773,0.000031565305,0.0011404114,6.705883e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009963935,0.00064335833,0.98171145,0.000057830235,0.0012749906,0.000048494676,0.00011770953,0.000005365661,0.0048469724,0.0007695091,0.000038756836,0.009489169],"study_design_scores_gemma":[0.0024519432,0.0005319726,0.987659,0.000043608296,0.0023523052,0.00022396189,0.0000904324,0.0008946407,0.00035716133,0.0018577593,0.003466858,0.00007035786],"about_ca_topic_score_codex":0.000024913496,"about_ca_topic_score_gemma":0.00031754776,"teacher_disagreement_score":0.009418812,"about_ca_system_score_codex":0.000007933015,"about_ca_system_score_gemma":0.00022340845,"threshold_uncertainty_score":0.4954583},"labels":[],"label_agreement":null},{"id":"W2154986933","doi":"10.2174/1874285801105010119","title":"Farnesol, a Fungal Quorum-Sensing Molecule Triggers Candida Albicans Morphological Changes by Downregulating the Expression of Different Secreted Aspartyl Proteinase Genes","year":2011,"lang":"en","type":"article","venue":"The Open Microbiology Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Farnesol; Candida albicans; Hypha; Biology; Microbiology; Morphogenesis; Cell biology; Gene expression; Yeast; Gene; Molecular biology; Biochemistry","score_opus":0.04142236187882776,"score_gpt":0.2748006145793109,"score_spread":0.23337825270048312,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154986933","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953616,0.0013404499,0.00031911378,0.0013136498,0.00009763251,0.0008768277,0.000044144334,0.000011293319,0.0006352333],"genre_scores_gemma":[0.9980694,0.00014702533,0.00049580313,0.00046862295,0.000078040604,0.0000116691635,0.000024573272,0.000017409482,0.0006874235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979913,0.000707528,0.00045271547,0.00028806768,0.00011770635,0.0004426844],"domain_scores_gemma":[0.9987492,0.00014356595,0.0004169633,0.0004292052,0.0001404879,0.000120551966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010356467,0.00023400987,0.0005265408,0.000042717555,0.00052482635,0.00003883141,0.0005379473,0.00017560375,0.00073444383],"category_scores_gemma":[0.00013511741,0.00010149555,0.00013948264,0.000111455425,0.00063896633,0.00005457698,0.00027556275,0.0006213327,0.000005146214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015929064,0.000110552166,0.0062325806,0.000014525205,0.0000860844,0.000072848496,0.00092562556,5.9425406e-7,0.9870411,0.000012119816,0.0012925992,0.0026184702],"study_design_scores_gemma":[0.0017293702,0.0009351129,0.009509443,0.00023292055,0.0001685021,0.0023895155,0.0022494593,0.00003668922,0.9817143,0.00009248538,0.0007470838,0.00019513359],"about_ca_topic_score_codex":0.00022390927,"about_ca_topic_score_gemma":0.00017793447,"teacher_disagreement_score":0.0053268094,"about_ca_system_score_codex":0.000058718917,"about_ca_system_score_gemma":0.00010495853,"threshold_uncertainty_score":0.80416447},"labels":[],"label_agreement":null},{"id":"W2155106517","doi":"10.1128/mbio.02489-14","title":"Correction for Sandai et al., The Evolutionary Rewiring of Ubiquitination Targets Has Reprogrammed the Regulation of Carbon Assimilation in the Pathogenic Yeast Candida albicans","year":2015,"lang":"en","type":"erratum","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Candida albicans; Yeast; Ubiquitin; Assimilation (phonology); Microbiology; Biology; Computational biology; Gene; Genetics","score_opus":0.037056598425809474,"score_gpt":0.3034628413268007,"score_spread":0.2664062429009912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155106517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.551123,0.03536265,0.0063981116,0.14706106,0.052874517,0.034885652,0.001617894,0.0003717702,0.17030534],"genre_scores_gemma":[0.9899839,0.00014607803,0.000066551096,0.00035374623,0.000330791,0.00014718492,0.0013413832,0.00002520033,0.007605122],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9978955,0.00035573033,0.00057223707,0.0003208833,0.0006597038,0.00019599545],"domain_scores_gemma":[0.9979249,0.00027900853,0.00058016676,0.0006299846,0.00055799726,0.000027895421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002856959,0.00017742127,0.00035431297,0.00009743124,0.00014468834,0.000018878045,0.00016468336,0.00024548353,0.000012514079],"category_scores_gemma":[0.0013183373,0.00009892494,0.00018042227,0.00035083367,0.00024781542,0.000060149723,0.00002860672,0.0005217151,3.9964473e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000944162,0.00021322454,0.013968918,0.00028852493,0.000080780635,0.0000013247995,0.004366291,0.000081271006,0.0038765993,0.00014889224,0.96783245,0.008197556],"study_design_scores_gemma":[0.00092854054,0.0004045509,0.818458,0.00067951385,0.0002739349,0.000012181151,0.0021446608,0.012377555,0.0003749137,0.000750837,0.16343352,0.00016174382],"about_ca_topic_score_codex":0.00089029846,"about_ca_topic_score_gemma":0.0036610398,"teacher_disagreement_score":0.80448914,"about_ca_system_score_codex":0.00028854518,"about_ca_system_score_gemma":0.00067848206,"threshold_uncertainty_score":0.4034042},"labels":[],"label_agreement":null},{"id":"W2155178263","doi":"10.1002/1520-6017(200102)90:2<124::aid-jps3>3.0.co;2-x","title":"Heat‐Induced Superaggregation of Amphotericin B Modifies Its Interaction with Serum Proteins and Lipoproteins and Stimulation of TNF‐α","year":2001,"lang":"en","type":"article","venue":"Journal of Pharmaceutical Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Medical Research Council; Bristol-Myers Squibb","keywords":"Lipoprotein; Albumin; Chemistry; Stimulation; Triglyceride; Serum albumin; Circular dichroism; High-density lipoprotein; Cytokine; Absorption (acoustics); Low-density lipoprotein; Endocrinology; Pharmacology; Internal medicine; Cholesterol; Biochemistry; Biology; Medicine","score_opus":0.08164555296381491,"score_gpt":0.38130396045000087,"score_spread":0.29965840748618594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155178263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976786,0.00037126135,0.0005797525,0.0009689748,0.000041436186,0.00023261148,0.0000014065431,0.0000030162212,0.0001229403],"genre_scores_gemma":[0.99885195,0.00033941568,0.000703417,0.000040248327,0.00004520844,8.925272e-7,2.132195e-7,0.000002691609,0.000015978347],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897707,0.000052279003,0.00033917106,0.00011335891,0.0004091948,0.00010892881],"domain_scores_gemma":[0.99938756,0.0000774407,0.00013077878,0.000044501547,0.0002545355,0.00010517478],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060990144,0.000073002586,0.00023498948,0.00010800355,0.00006249783,0.000016026255,0.00004224841,0.000035933437,0.000045689696],"category_scores_gemma":[0.00015815819,0.000044841498,0.000031027128,0.00024738905,0.0002568654,0.00040549264,0.000014096456,0.00013957286,1.7761914e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014303079,0.00016531338,0.1775984,0.0001743089,0.000026108039,0.000010703834,0.00046724195,0.00009446906,0.79535335,0.000048955615,0.0000020015739,0.024628853],"study_design_scores_gemma":[0.0015749143,0.003025688,0.42543483,0.0005857815,0.00010089837,0.000243709,0.0008807092,0.015428999,0.5524674,0.000106775056,0.00007129287,0.000078972684],"about_ca_topic_score_codex":0.00004074818,"about_ca_topic_score_gemma":0.000023615114,"teacher_disagreement_score":0.24783643,"about_ca_system_score_codex":0.000025590662,"about_ca_system_score_gemma":0.000080536985,"threshold_uncertainty_score":0.18285832},"labels":[],"label_agreement":null},{"id":"W2155458286","doi":"10.1128/ec.2.6.1350-1360.2003","title":"<i>MFα1</i> , the Gene Encoding the α Mating Pheromone of <i>Candida albicans</i>","year":2003,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Candida albicans; Mating; Gene; Genetics; Pheromone; Encoding (memory); Fungal protein; Saccharomyces cerevisiae; Neuroscience","score_opus":0.013866452977527885,"score_gpt":0.2365875376361326,"score_spread":0.2227210846586047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155458286","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9030044,0.0014879754,0.0004988626,0.0006041907,0.0001531638,0.0003597223,0.0000047330705,0.000023735767,0.09386321],"genre_scores_gemma":[0.9937642,0.00012784234,0.0007208789,0.0009213936,0.00008721401,0.000007951324,0.000003643809,0.000019050198,0.0043477863],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998669,0.000101275094,0.00035797112,0.00022499955,0.00035461306,0.00029210304],"domain_scores_gemma":[0.9987272,0.0003522368,0.00013784757,0.00063421094,0.00007302688,0.00007545246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079364114,0.00014744714,0.0002712022,0.000018365588,0.00019433384,0.000015688187,0.00017579642,0.000053294134,0.0005202779],"category_scores_gemma":[0.00021216655,0.0000781107,0.00014911918,0.00025426986,0.00021056691,0.000039205243,0.00003337695,0.0002614539,0.00004429751],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002027524,0.0005468856,0.7314286,0.00048446306,0.00011921879,0.00005902304,0.002935308,0.00007141044,0.2521566,0.0021940486,0.00739712,0.0024045638],"study_design_scores_gemma":[0.0028198306,0.0005034409,0.42162812,0.00030311267,0.000535008,0.00011440188,0.0062134787,0.00035759134,0.56037134,0.00097023963,0.0057244063,0.0004590718],"about_ca_topic_score_codex":0.00008989955,"about_ca_topic_score_gemma":0.000038612612,"teacher_disagreement_score":0.3098005,"about_ca_system_score_codex":0.000041048545,"about_ca_system_score_gemma":0.00012735453,"threshold_uncertainty_score":0.5696678},"labels":[],"label_agreement":null},{"id":"W2156183823","doi":"10.1128/jcm.39.7.2708-2712.2001","title":"Novel Fluorescent Broth Microdilution Method for Fluconazole Susceptibility Testing of <i>Candida albicans</i>","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Alberta Hospital; University of Alberta","funders":"","keywords":"Broth microdilution; Candida albicans; Candida parapsilosis; Candida glabrata; Candida tropicalis; Fluconazole; Microbiology; Serial dilution; Biology; Corpus albicans; Minimum inhibitory concentration; Antifungal; Medicine; Antibiotics","score_opus":0.09230479870234821,"score_gpt":0.41953949801524093,"score_spread":0.32723469931289273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156183823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93878007,0.00039289964,0.0584946,0.0010683727,0.0005461049,0.0004286257,0.00007175658,0.000010885866,0.00020666295],"genre_scores_gemma":[0.84319586,0.00012933975,0.15493208,0.0009098766,0.0005938772,0.0000022402949,0.000016964234,0.000017090662,0.00020268759],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99642026,0.00020334174,0.002561092,0.00034949058,0.000101318816,0.00036451293],"domain_scores_gemma":[0.994188,0.0026179957,0.0013695863,0.0003474647,0.0012573275,0.00021962254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0045632124,0.000187472,0.0013622581,0.000093666255,0.00005930733,0.000006083379,0.00020721482,0.00034513604,0.000112516],"category_scores_gemma":[0.0067239525,0.00013840094,0.00075385324,0.00020212274,0.00039782605,0.000066925204,0.000049889204,0.0005803889,0.000004112995],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038389803,0.0008596704,0.25314984,0.00010893189,0.00012183546,0.000007711053,0.00001971737,0.0000049924847,0.725765,0.000037695816,0.0013973115,0.014688296],"study_design_scores_gemma":[0.019976972,0.010449505,0.7337926,0.00081553694,0.0009752594,0.0025886996,0.0002719203,0.00037891688,0.14388083,0.0008419868,0.0855385,0.0004892979],"about_ca_topic_score_codex":0.000049606922,"about_ca_topic_score_gemma":0.00009078329,"teacher_disagreement_score":0.5818842,"about_ca_system_score_codex":0.00008625039,"about_ca_system_score_gemma":0.0005819678,"threshold_uncertainty_score":0.8049685},"labels":[],"label_agreement":null},{"id":"W2156916681","doi":"10.1186/1472-6882-12-6","title":"Cranberry proanthocyanidins inhibit the adherence properties of Candida albicans and cytokine secretion by oral epithelial cells","year":2012,"lang":"en","type":"article","venue":"BMC Complementary and Alternative Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"University of North Carolina at Chapel Hill; Cranberry Institute; University of Pennsylvania","keywords":"Candida albicans; Corpus albicans; Microbiology; Secretion; Cytokine; Saliva; Medicine; Chemistry; Biology; Immunology; Internal medicine","score_opus":0.06810757594541444,"score_gpt":0.30767192726006,"score_spread":0.23956435131464554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156916681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947555,0.0025357632,0.00048693886,0.00092869793,0.00014252306,0.00067830266,0.00014502,0.000012357681,0.0003148953],"genre_scores_gemma":[0.99813175,0.00051368284,0.00014548487,0.0004271031,0.00030743593,0.000021232518,0.000060598843,0.000010932158,0.00038175416],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868923,0.000104349776,0.00036795388,0.00023329484,0.00033932878,0.00026581757],"domain_scores_gemma":[0.99933976,0.00010620701,0.00014127293,0.00017372172,0.00008265551,0.00015638264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005847013,0.0001841648,0.0003785856,0.000043447926,0.00014045658,0.0000057661723,0.00007871,0.000024938437,0.00051456835],"category_scores_gemma":[0.00006150357,0.000101106016,0.000035685072,0.000094496456,0.00079482165,0.00013228564,0.00007866956,0.00016146053,0.0000015460687],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009963462,0.00017447837,0.3615266,0.0003637277,0.00009424255,0.0000027614908,0.0033783787,2.931192e-7,0.62951446,0.0003380665,0.0013929126,0.0022177373],"study_design_scores_gemma":[0.010165089,0.0040866523,0.41860008,0.0014280512,0.0006602374,0.00007285796,0.013694565,0.00077000883,0.53290594,0.0003229589,0.016812636,0.0004809179],"about_ca_topic_score_codex":0.0025155714,"about_ca_topic_score_gemma":0.0006907278,"teacher_disagreement_score":0.096608475,"about_ca_system_score_codex":0.00003531051,"about_ca_system_score_gemma":0.00003782328,"threshold_uncertainty_score":0.56341624},"labels":[],"label_agreement":null},{"id":"W2157149808","doi":"10.1128/ec.00070-08","title":"Genomewide Location Analysis of <i>Candida albicans</i> Upc2p, a Regulator of Sterol Metabolism and Azole Drug Resistance","year":2008,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Gene; Promoter; Candida albicans; Repressor; Transcription factor; Genetics; Biochemistry; Gene expression","score_opus":0.009105583424874336,"score_gpt":0.22248342958026796,"score_spread":0.21337784615539362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157149808","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99068403,0.0054457877,0.00050647196,0.00014780078,0.00003769346,0.00023989461,0.000024716232,0.000015987038,0.0028976146],"genre_scores_gemma":[0.9890888,0.00044874946,0.0010821145,0.00013166487,0.000029706804,0.0000046022474,0.000032648844,0.000014195175,0.0091675315],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99852324,0.000046867146,0.0005323356,0.00032580533,0.00037519872,0.0001965419],"domain_scores_gemma":[0.9987183,0.000102062455,0.000245905,0.0005667289,0.00023578048,0.00013120956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027960152,0.0001507755,0.00072325766,0.00021569728,0.000058970287,0.0000036697134,0.00009202922,0.00006100432,0.00013701846],"category_scores_gemma":[0.000054692762,0.00013381304,0.0001709913,0.0009117353,0.00028196909,0.000071034476,0.000031420448,0.0001052415,0.000004078524],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008325647,0.00041295445,0.9674717,0.0008990447,0.00061910547,0.000024020288,0.0020649612,0.000070110575,0.025677254,0.00018242671,0.0014665999,0.0002792417],"study_design_scores_gemma":[0.00087412755,0.00003198421,0.9793179,0.000060095623,0.0014161173,0.0000022674965,0.00020490377,0.0002306873,0.01719035,0.00003695252,0.0005257508,0.00010885028],"about_ca_topic_score_codex":0.00018419379,"about_ca_topic_score_gemma":0.00037183988,"teacher_disagreement_score":0.011846198,"about_ca_system_score_codex":0.00003918848,"about_ca_system_score_gemma":0.00014886649,"threshold_uncertainty_score":0.5456737},"labels":[],"label_agreement":null},{"id":"W2157339501","doi":"10.1016/j.jss.2014.03.024","title":"Lipopolysaccharide-mediated enhancement of zymosan phagocytosis by RAW 264.7 macrophages is independent of opsonins, laminarin, mannan, and complement receptor 3","year":2014,"lang":"en","type":"article","venue":"Journal of Surgical Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Douglas College; Royal Columbian Hospital","funders":"","keywords":"Laminarin; Zymosan; Phagocytosis; Mannan; Microbiology; Opsonin; Lipopolysaccharide; Antibody opsonization; Biology; Innate immune system; Immune system; Chemistry; Polysaccharide; Biochemistry; Immunology; In vitro","score_opus":0.044659675713357154,"score_gpt":0.3749769904370506,"score_spread":0.3303173147236934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157339501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932612,0.0027281698,0.00018538082,0.002717429,0.000074895775,0.00031781243,0.000040809202,0.0000040997033,0.00067018473],"genre_scores_gemma":[0.9911568,0.007019708,0.00032488827,0.00006081187,0.000113281014,0.0000054687875,0.000011635586,0.00001742797,0.0012899744],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9951754,0.00042321955,0.001211201,0.0002971691,0.0023977,0.0004952596],"domain_scores_gemma":[0.99659395,0.0008569218,0.00046257145,0.00033512985,0.0013032478,0.000448172],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.004930602,0.00018033411,0.0008856007,0.0002775577,0.00009748428,0.00002462762,0.0002727622,0.00014310828,0.0019758816],"category_scores_gemma":[0.0006454405,0.0001314888,0.00021132952,0.00031319205,0.0005116216,0.00011220895,0.00019602216,0.00075500156,0.000014980125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006838358,0.0021841305,0.13809162,0.0009865605,0.000439278,0.00014458645,0.0007027314,5.90845e-7,0.78757733,0.00042785157,0.035978105,0.026628854],"study_design_scores_gemma":[0.006555051,0.005816181,0.027312364,0.0008296218,0.000089463785,0.000058700174,0.0012584521,0.00012145071,0.9079114,0.00015644905,0.049699217,0.00019165303],"about_ca_topic_score_codex":0.00012146235,"about_ca_topic_score_gemma":0.000011700252,"teacher_disagreement_score":0.12033407,"about_ca_system_score_codex":0.00014655465,"about_ca_system_score_gemma":0.00022554907,"threshold_uncertainty_score":0.9989365},"labels":[],"label_agreement":null},{"id":"W2157609678","doi":"10.1093/jpids/piv014","title":"(1→3)-β-d-Glucan in Cerebrospinal Fluid as a Biomarker for<i>Candida</i>and<i>Aspergillus</i>Infections of the Central Nervous System in Pediatric Patients","year":2015,"lang":"en","type":"article","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Astellas Pharma; National Center for Research Resources; Sick Kids Foundation; Pfizer","keywords":"Medicine; Cerebrospinal fluid; Aspergillus; Central nervous system; Biomarker; Intensive care medicine; Immunology; Pathology; Microbiology; Internal medicine; Biology","score_opus":0.009251643102620848,"score_gpt":0.24576551828879234,"score_spread":0.23651387518617148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157609678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963598,0.0014733813,0.00005703725,0.00018893156,0.00096745294,0.0007128675,0.000047251615,0.000015079209,0.0001781563],"genre_scores_gemma":[0.9986777,0.0004889839,0.00001915371,0.00017474385,0.00055144535,0.000015126467,0.0000024682274,0.000021777158,0.000048638547],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99782455,0.00018233375,0.00080996816,0.00020849821,0.00058846315,0.00038619677],"domain_scores_gemma":[0.99814534,0.00016511827,0.00062751357,0.00029072817,0.00049313635,0.00027813937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005477867,0.00020856316,0.0004849138,0.00013423084,0.0001652051,0.000023952023,0.0001920997,0.00013898735,0.000005668172],"category_scores_gemma":[0.0007446263,0.00012614422,0.000818164,0.0010957341,0.00012173686,0.0001477556,0.00009907079,0.000362005,9.0214525e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031651204,0.0008280743,0.9942796,0.0004973919,0.00005198433,0.0000031171355,0.00054125994,0.00015752498,0.000017068125,0.000027922923,0.0031857332,0.00009378178],"study_design_scores_gemma":[0.0045669316,0.0005092422,0.99283004,0.00008237954,0.0007436078,0.000106942476,0.0005401365,0.00024119538,0.0000060049806,0.00015565466,0.00009413018,0.00012372239],"about_ca_topic_score_codex":0.0003413925,"about_ca_topic_score_gemma":0.00016462177,"teacher_disagreement_score":0.00425042,"about_ca_system_score_codex":0.00085482874,"about_ca_system_score_gemma":0.00119372,"threshold_uncertainty_score":0.5144012},"labels":[],"label_agreement":null},{"id":"W2157846113","doi":"10.1128/aac.00118-10","title":"Correlation between Azole Susceptibilities, Genotypes, and <i>ERG11</i> Mutations in <i>Candida albicans</i> Isolates Associated with Vulvovaginal Candidiasis in China","year":2010,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Natural Science Foundation of China","keywords":"Fluconazole; Genotype; Itraconazole; Biology; Azole; Microbiology; Candida albicans; Corpus albicans; Gene; Genetics; Antifungal","score_opus":0.006810376688565151,"score_gpt":0.2389288057105611,"score_spread":0.23211842902199595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157846113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975459,0.000042485673,0.000052466738,0.0014751311,0.000045514847,0.0003922064,0.00004743076,0.000025523783,0.0003733222],"genre_scores_gemma":[0.99770486,0.00031525982,0.00016362184,0.001213058,0.00005148925,0.0000060894904,0.00016556698,0.000026397844,0.00035366687],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988516,0.000037513644,0.00030220608,0.00037733087,0.00012118151,0.00031014395],"domain_scores_gemma":[0.99952185,0.00006701492,0.000088421766,0.00016651806,0.000047837304,0.00010836855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022793576,0.00020500683,0.00038104548,0.0001189671,0.000106977386,0.000048459147,0.000046438552,0.0001635644,0.00013661962],"category_scores_gemma":[0.000034021847,0.00017300349,0.000034215547,0.0002797236,0.00023120694,0.0001660869,0.00001562589,0.00039054264,0.0000017024112],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002743739,0.00018003053,0.9859333,0.000037964066,0.000044534314,0.000015581354,0.0013663187,0.0000035375845,0.008705598,0.000019501438,0.000400857,0.0030184272],"study_design_scores_gemma":[0.0033252854,0.00017769627,0.9939079,0.00013745706,0.000043183827,0.000012554249,0.0001547892,0.00015611983,0.0010113129,0.000089998815,0.0007865004,0.00019719811],"about_ca_topic_score_codex":0.0021118198,"about_ca_topic_score_gemma":0.012031379,"teacher_disagreement_score":0.00991956,"about_ca_system_score_codex":0.000057513298,"about_ca_system_score_gemma":0.000113156384,"threshold_uncertainty_score":0.7054877},"labels":[],"label_agreement":null},{"id":"W2158436147","doi":"10.1080/13693780802238834","title":"The characteristics of<i>Aspergillus fumigatus</i>mycetoma development: is this a biofilm?","year":2008,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":135,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York Central Hospital","funders":"","keywords":"Biofilm; Aspergillus fumigatus; Microbiology; Fungus; Biology; Pathogenic fungus; Population; Bacteria; Botany","score_opus":0.035197297525472564,"score_gpt":0.33636543410725206,"score_spread":0.3011681365817795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158436147","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005502544,0.9932088,0.000017186805,0.00048278697,0.00078452873,0.0007945981,0.000053011852,0.000055100907,0.004053721],"genre_scores_gemma":[0.00037184593,0.9933822,0.00020764479,0.0009467316,0.00042096,0.00009670433,0.0001352971,0.000054391356,0.004384188],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99566436,0.00031974178,0.0016907887,0.0006103168,0.0010237462,0.0006910511],"domain_scores_gemma":[0.9965101,0.0013977042,0.00055302086,0.00082249293,0.00022485577,0.0004918659],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007452883,0.0005032719,0.0031408675,0.00014078258,0.0002852917,0.0000089134855,0.000595532,0.0014051435,0.0029613788],"category_scores_gemma":[0.0029852923,0.00028416954,0.00068046636,0.00045985956,0.0013159215,0.000020250041,0.00024157367,0.0013689908,0.00061566423],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000806266,0.00017095337,0.0003906154,0.0061070393,0.00038195154,0.00052909955,0.00015612588,1.2077285e-10,0.0000013813097,0.00015371937,0.02054387,0.9714846],"study_design_scores_gemma":[0.00035913195,0.00020757361,0.0014979953,0.004480715,0.00038982724,0.000782043,0.000012265451,0.0000011326799,0.0000060598654,0.000009789057,0.9920146,0.00023889342],"about_ca_topic_score_codex":0.00001279234,"about_ca_topic_score_gemma":0.000018493649,"teacher_disagreement_score":0.9714707,"about_ca_system_score_codex":0.00021200247,"about_ca_system_score_gemma":0.004373851,"threshold_uncertainty_score":0.999961},"labels":[],"label_agreement":null},{"id":"W2158584837","doi":"10.1139/w07-095","title":"Antifungal susceptibility of bloodstream yeasts isolated at a public children’s hospital in Brazil: comparison of the Etest<sup>®</sup> and the AFST–EUCAST microdilution method","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Etest; Voriconazole; Fluconazole; Itraconazole; Candida glabrata; Microbiology; Amphotericin B; Candida tropicalis; Biology; Minimum inhibitory concentration; Candida albicans; Broth microdilution; Candida krusei; Fungemia; Flucytosine; Caspofungin; Antifungal; Antibiotics","score_opus":0.010681702923143323,"score_gpt":0.27264733508073097,"score_spread":0.26196563215758767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158584837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99516326,0.002419636,0.00012288801,0.001544283,0.00013890593,0.00043073605,0.00010038118,0.0000027376068,0.00007719772],"genre_scores_gemma":[0.99938476,0.000026049252,0.00029994175,0.00015333435,0.00005788902,6.0279706e-7,0.000016254458,0.000012485953,0.000048697926],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976743,0.00048189363,0.0010340927,0.00024846068,0.000096325035,0.00046491472],"domain_scores_gemma":[0.99800956,0.00032257912,0.0006248349,0.0003792293,0.0003913385,0.00027243193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024868774,0.00018874167,0.00079800846,0.00025777228,0.0001226136,0.000010572802,0.00029021906,0.00026007715,0.00009176639],"category_scores_gemma":[0.00082823035,0.00011580542,0.00025933652,0.00037050323,0.0014531161,0.000065960245,0.000053939097,0.0006150538,0.0000016237066],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006679017,0.00014170955,0.92600816,0.000042727836,0.000119546734,0.000016512126,0.0016361983,0.000007792993,0.069673784,0.00005670133,0.00056437094,0.0010646097],"study_design_scores_gemma":[0.0032711918,0.00053348206,0.98013914,0.00014722056,0.00012747571,0.0008509713,0.0009546743,0.000050320923,0.013536598,0.000040182324,0.00024002285,0.000108708424],"about_ca_topic_score_codex":0.004162701,"about_ca_topic_score_gemma":0.13437277,"teacher_disagreement_score":0.13021007,"about_ca_system_score_codex":0.00027420427,"about_ca_system_score_gemma":0.0009073856,"threshold_uncertainty_score":0.88142264},"labels":[],"label_agreement":null},{"id":"W2158592372","doi":"10.1128/ec.00325-09","title":"Role of Transcription Factor CaNdt80p in Cell Separation, Hyphal Growth, and Virulence in Candida albicans","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Biotechnology Research Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Transcription factor; Gene; Cell biology; Regulator; Saccharomyces cerevisiae; Fungal protein; Genetics","score_opus":0.006868243709482025,"score_gpt":0.24415635826335044,"score_spread":0.23728811455386842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158592372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934524,0.00035972064,0.00003577697,0.00009375987,0.000078775585,0.0002825187,0.000017887322,0.000009933726,0.005669173],"genre_scores_gemma":[0.9991343,0.00012483145,0.0001653716,0.000058820508,0.00003175781,0.000006012057,0.000012222882,0.000009902921,0.0004567814],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99900925,0.000035395555,0.00031529122,0.00025732437,0.00017890928,0.00020380624],"domain_scores_gemma":[0.99956065,0.00005797426,0.000054746844,0.00018359837,0.000042246058,0.000100787285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014586507,0.00012019303,0.00026385544,0.000105296815,0.000022195429,0.000007115426,0.000059602422,0.00010702068,0.00021635104],"category_scores_gemma":[0.000041928804,0.00011059526,0.000041758372,0.0001812926,0.000099801095,0.000102199934,0.000009772355,0.00029585292,0.0000063670864],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011114093,0.00015876845,0.57949626,0.00012618369,0.0000013413197,0.000007673907,0.0011315556,0.0000014790212,0.4187058,0.000027439457,0.000012245635,0.00022010977],"study_design_scores_gemma":[0.0011709577,0.00011801633,0.8857716,0.00003705251,0.00001426733,0.0000029837242,0.00042286373,0.00023794398,0.11197688,0.00012064844,0.000035309706,0.000091509646],"about_ca_topic_score_codex":0.003387262,"about_ca_topic_score_gemma":0.01985659,"teacher_disagreement_score":0.30672893,"about_ca_system_score_codex":0.00003515295,"about_ca_system_score_gemma":0.00014553938,"threshold_uncertainty_score":0.99802846},"labels":[],"label_agreement":null},{"id":"W2159038482","doi":"10.1128/jcm.00124-09","title":"Interlaboratory Reproducibility of a Single-Locus Sequence-Based Method for Strain Typing of <i>Aspergillus fumigatus</i>","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Health and Long Term Care","funders":"National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention","keywords":"Aspergillus fumigatus; Typing; Reproducibility; Biology; Locus (genetics); Microbiology; Genetics; Chemistry; Gene; Chromatography","score_opus":0.11522474522991173,"score_gpt":0.43744465177990266,"score_spread":0.32221990654999094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159038482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97791904,0.0007965079,0.018126236,0.0021334612,0.00042949192,0.00032625158,0.00015087773,0.0000083048035,0.00010985229],"genre_scores_gemma":[0.93907076,0.000034791363,0.05911632,0.0014797276,0.00024376201,6.1524764e-7,0.000011563704,0.000009018069,0.0000334313],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.995771,0.0005782104,0.002833368,0.0005029591,0.000077668046,0.00023679154],"domain_scores_gemma":[0.99457145,0.0013829635,0.0016882189,0.0007694667,0.0014458434,0.00014205194],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.009822716,0.00015303555,0.0015527826,0.000101670645,0.000022087523,0.0000029554376,0.0002054443,0.00033059684,0.00004430436],"category_scores_gemma":[0.013918263,0.00011151746,0.00076248165,0.00019375641,0.00044650096,0.000053287757,0.000019217752,0.00050594466,7.8302656e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006238831,0.0010002003,0.01298565,0.00018667027,0.00011469606,0.000010649634,0.00005287797,0.0000092238015,0.94593817,0.00008526934,0.0005362194,0.032841526],"study_design_scores_gemma":[0.012615257,0.03328657,0.06364427,0.0017490564,0.0008383761,0.00027121883,0.00046620853,0.00012360113,0.8684823,0.00313684,0.014963108,0.00042320605],"about_ca_topic_score_codex":0.000003724358,"about_ca_topic_score_gemma":0.000011884639,"teacher_disagreement_score":0.07745589,"about_ca_system_score_codex":0.000065376684,"about_ca_system_score_gemma":0.0008617112,"threshold_uncertainty_score":0.9943879},"labels":[],"label_agreement":null},{"id":"W2159660941","doi":"10.3899/jrheum.120707","title":"Another Consequence of Severe Lupus: Invasive Fungal Disease","year":2012,"lang":"en","type":"letter","venue":"The Journal of Rheumatology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Alberta Innovates","keywords":"Medicine; Immunology; Neutropenia; Disease; Hypogammaglobulinemia; Risk factor; Internal medicine; Antibody; Chemotherapy","score_opus":0.024855936272569736,"score_gpt":0.2675259987715933,"score_spread":0.24267006249902354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159660941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7047623,0.008129846,0.000106178144,0.28516394,0.0009908017,0.00029004528,0.00005577174,0.000009770209,0.0004913407],"genre_scores_gemma":[0.8877269,0.0028241698,0.00010490959,0.10708253,0.00020501847,0.0000017241224,0.000011211974,0.000041063886,0.0020024742],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976184,0.0004872251,0.0008812153,0.00013893902,0.0004957773,0.00037848786],"domain_scores_gemma":[0.99632055,0.0012041304,0.0012940966,0.0005754212,0.00047570487,0.00013008133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007213023,0.00026005748,0.0011416635,0.00013766199,0.00005486063,0.000005046991,0.00039543211,0.00043705938,0.0007324026],"category_scores_gemma":[0.0009167311,0.00015004048,0.00035970972,0.000101593316,0.00083058386,0.000088652414,0.00005866146,0.0017888603,0.00004822604],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001478327,0.000064021,0.4093358,0.0010661779,0.00035488696,0.0009530173,0.00030577744,0.0000011117046,0.0002751115,0.000028297054,0.5860536,0.00008388948],"study_design_scores_gemma":[0.007729242,0.0021331855,0.15753198,0.011572719,0.0069930907,0.35132614,0.0016635995,0.0000082517745,0.00095559435,0.004608858,0.4540803,0.0013970232],"about_ca_topic_score_codex":0.00006400067,"about_ca_topic_score_gemma":0.000029259872,"teacher_disagreement_score":0.35037315,"about_ca_system_score_codex":0.00008509062,"about_ca_system_score_gemma":0.001091757,"threshold_uncertainty_score":0.8019295},"labels":[],"label_agreement":null},{"id":"W2159940514","doi":"10.1371/journal.pgen.1000705","title":"Acquisition of Aneuploidy Provides Increased Fitness during the Evolution of Antifungal Drug Resistance","year":2009,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":336,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Aneuploidy; Biology; Isochromosome; Fluconazole; Antifungal drug; Genetics; Candida albicans; Drug resistance; Chromosome; Karyotype; Microbiology; Gene; Antifungal","score_opus":0.009809965417842195,"score_gpt":0.24154487727135787,"score_spread":0.2317349118535157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159940514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962254,0.002222154,0.000083062216,0.00033323056,0.000025882322,0.000419339,0.000021864318,0.00002616908,0.00064285414],"genre_scores_gemma":[0.998805,0.0000946666,0.00043291168,0.000043462645,0.000072977164,0.0000043718937,0.000009537912,0.00001039652,0.0005266697],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99873024,0.00007994106,0.00038451792,0.00020900452,0.0004154188,0.000180867],"domain_scores_gemma":[0.99890965,0.00006999332,0.00018474716,0.00048322655,0.00029663526,0.000055754503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022818022,0.00011794537,0.0002789275,0.000057788377,0.000081195314,0.000005857867,0.00012343413,0.00006336118,0.000029335622],"category_scores_gemma":[0.00013919486,0.00008789843,0.00009272283,0.00024173474,0.00018716491,0.00004724203,0.00002042,0.00011449906,0.0000023360626],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072118046,0.0003317462,0.20759979,0.0006320848,0.000027933927,0.000005235272,0.00025375932,0.000014206865,0.7900169,0.00020800154,0.00010128053,0.0000878813],"study_design_scores_gemma":[0.0004503165,0.00009328787,0.5890278,0.00022147603,0.00008601159,0.0000020541652,0.00020306981,0.00026671353,0.40921175,0.00035973632,0.0000150547985,0.00006272833],"about_ca_topic_score_codex":0.000016387026,"about_ca_topic_score_gemma":0.00006340798,"teacher_disagreement_score":0.381428,"about_ca_system_score_codex":0.00010021339,"about_ca_system_score_gemma":0.00013534208,"threshold_uncertainty_score":0.3584394},"labels":[],"label_agreement":null},{"id":"W2160179793","doi":"10.1128/aac.02020-13","title":"Multicenter Study of Anidulafungin and Micafungin MIC Distributions and Epidemiological Cutoff Values for Eight Candida Species and the CLSI M27-A3 Broth Microdilution Method","year":2013,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; University of Alberta","funders":"Centers for Disease Control and Prevention; Astellas Pharma; Gilead Sciences","keywords":"Anidulafungin; Micafungin; Broth microdilution; Candida dubliniensis; Microbiology; Candida glabrata; Candida parapsilosis; Biology; Candida albicans; Corpus albicans; Medicine; Minimum inhibitory concentration; Antimicrobial; Fluconazole; Antifungal","score_opus":0.020047262334250936,"score_gpt":0.3042022268768635,"score_spread":0.2841549645426126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160179793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919007,0.00057703623,0.0019299292,0.0036668018,0.000039046576,0.0017386376,0.00011681427,0.000012085193,0.000018959556],"genre_scores_gemma":[0.99273646,0.0027943277,0.002413268,0.0015367495,0.00006137649,0.00002752585,0.00004127962,0.00001358157,0.00037543717],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99878013,0.0001246891,0.00036274604,0.00039971498,0.00008296906,0.000249726],"domain_scores_gemma":[0.9991915,0.0003098631,0.00012185747,0.00018568581,0.00009569051,0.0000953927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045548938,0.00021326555,0.00056393316,0.000037867783,0.00022819967,0.000047532176,0.000057453617,0.00010277137,0.00004916802],"category_scores_gemma":[0.00008987196,0.00012564445,0.0000797616,0.00006753581,0.000496298,0.000079548634,0.00004943191,0.00012146493,6.49543e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018664496,0.0007940762,0.83206856,0.00026460638,0.00034566844,0.0000021595938,0.0021876986,4.1968576e-7,0.14368366,0.00025895305,0.013138466,0.0053892583],"study_design_scores_gemma":[0.008181837,0.0004328303,0.9798701,0.00008503014,0.00019773662,0.000016311895,0.0007295233,0.0007181822,0.007157105,0.0003517166,0.0020899782,0.00016967882],"about_ca_topic_score_codex":0.0003894361,"about_ca_topic_score_gemma":0.000059582366,"teacher_disagreement_score":0.14780149,"about_ca_system_score_codex":0.0000188316,"about_ca_system_score_gemma":0.000014163352,"threshold_uncertainty_score":0.5123632},"labels":[],"label_agreement":null},{"id":"W2160349292","doi":"10.1128/aac.48.12.4808-4812.2004","title":"Liposomal Nystatin in Patients with Invasive Aspergillosis Refractory to or Intolerant of Amphotericin B","year":2004,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Aspergillosis; Medicine; Nystatin; Amphotericin B; Refractory (planetary science); Internal medicine; Echinocandin; Surgery; Gastroenterology; Discontinuation; Chills; Transplantation; Fluconazole; Immunology; Antifungal; Biology; Dermatology","score_opus":0.008955482981208856,"score_gpt":0.24360540227471747,"score_spread":0.23464991929350862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160349292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984337,0.0000067685996,0.00006140563,0.00085043244,0.000030094727,0.00047622755,0.000020826152,0.000011141683,0.00010938841],"genre_scores_gemma":[0.9925754,0.00021600362,0.0011840636,0.005841469,0.000020626434,0.0000036902418,0.000018340925,0.000022411556,0.00011799637],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990254,0.000015946936,0.0002862725,0.00029032337,0.00017027382,0.00021179605],"domain_scores_gemma":[0.9995177,0.000017722736,0.00008082202,0.00018900834,0.0000939296,0.00010081282],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000059651655,0.00016655409,0.00037771187,0.00009234522,0.000035504654,0.000010701672,0.00006186738,0.0000695283,0.00011323586],"category_scores_gemma":[0.00002222661,0.000111518064,0.000044658453,0.00022299027,0.00008516883,0.000071034825,0.000019346102,0.00009626122,0.0000047977464],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0070553604,0.0011808651,0.9576712,0.00016962939,0.00006584924,0.000028664692,0.0019966017,0.000006833625,0.025285222,0.000006158959,0.00046611237,0.006067497],"study_design_scores_gemma":[0.006892505,0.0014733784,0.9659181,0.0005011625,0.000018535962,0.0000026399994,0.00009743052,6.341157e-7,0.024467688,0.000008714545,0.00047432142,0.00014485324],"about_ca_topic_score_codex":0.00034031068,"about_ca_topic_score_gemma":0.0004634257,"teacher_disagreement_score":0.008246929,"about_ca_system_score_codex":0.00007349432,"about_ca_system_score_gemma":0.000113199916,"threshold_uncertainty_score":0.45475745},"labels":[],"label_agreement":null},{"id":"W2160521739","doi":"10.1093/mmy/myu025","title":"Performance of MycAssay Aspergillus DNA real-time PCR assay compared with the galactomannan detection assay for the diagnosis of invasive aspergillosis from serum samples","year":2014,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Hôtel-Dieu de Québec; Université Laval","funders":"Pfizer","keywords":"Galactomannan; Aspergillosis; Aspergillus; Polymerase chain reaction; Gold standard (test); Biology; Real-time polymerase chain reaction; Confidence interval; Medicine; Microbiology; Gastroenterology; Internal medicine; Immunology; Gene; Biochemistry","score_opus":0.020195137273179026,"score_gpt":0.2590445015565602,"score_spread":0.2388493642833812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160521739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99215364,0.00010395854,0.0014452486,0.0042985636,0.00018101088,0.0008284944,0.00006838918,0.000038640854,0.0008820676],"genre_scores_gemma":[0.9981291,0.00044340434,0.00019534642,0.00055592816,0.00023279886,0.00021355959,0.00004056693,0.000028505752,0.00016074516],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972547,0.0005951003,0.00058053964,0.0004099757,0.00075146894,0.00040817334],"domain_scores_gemma":[0.98760533,0.010823335,0.00034222577,0.0006711892,0.00037429287,0.00018364443],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0023841476,0.00024190295,0.0008430335,0.00007156195,0.00022368444,0.0000071899526,0.00038158573,0.0003178466,0.0011046324],"category_scores_gemma":[0.00459129,0.00012140757,0.00020411798,0.00027432293,0.0010451641,0.000058435646,0.00008630587,0.00035336553,0.000017483104],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003373136,0.00054819166,0.92396677,0.00043089627,0.0006741057,0.000008787876,0.0007351638,0.00002548525,0.045516904,0.00024207938,0.0034030431,0.021075452],"study_design_scores_gemma":[0.0019628413,0.0019704727,0.9315664,0.0002298001,0.0004476093,0.000011809681,0.00035351777,0.0061442764,0.055069976,0.0000715318,0.0020212724,0.00015049649],"about_ca_topic_score_codex":0.0006101014,"about_ca_topic_score_gemma":0.0030999978,"teacher_disagreement_score":0.020924956,"about_ca_system_score_codex":0.000083580686,"about_ca_system_score_gemma":0.00026444247,"threshold_uncertainty_score":0.9998085},"labels":[],"label_agreement":null},{"id":"W2160687935","doi":"10.1093/jac/dkf074","title":"In vitro activity of three new triazoles and one echinocandin against Candida bloodstream isolates from cancer patients","year":2002,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"Pfizer Pharmaceuticals; Bristol-Myers Squibb","keywords":"Echinocandin; Microbiology; Bloodstream infection; Cancer; Echinocandins; Fungemia; In vitro; Biology; Medicine; Fluconazole; Antifungal; Caspofungin; Genetics","score_opus":0.018686069871738518,"score_gpt":0.25446689423396396,"score_spread":0.23578082436222544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160687935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99672645,0.0008603025,0.00005511256,0.0019276793,0.00011944791,0.00018293032,0.000048618196,0.0000045550046,0.000074895084],"genre_scores_gemma":[0.99387735,0.004184706,0.00088916044,0.00067406363,0.00026002832,3.0651492e-7,0.0000029136675,0.000018905526,0.00009258444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989069,0.00003265589,0.0004993473,0.00017248571,0.00019359592,0.00019503113],"domain_scores_gemma":[0.99910873,0.00006746701,0.00043660926,0.00013958743,0.000114553986,0.00013306527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013354108,0.00016901591,0.0006925595,0.00013175067,0.000030837673,0.000015961597,0.00009199897,0.00012123147,0.00019605746],"category_scores_gemma":[0.000042751748,0.00013728446,0.00015591152,0.00015354186,0.000089263245,0.00018706603,0.000013460119,0.00030099365,9.1152486e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004219318,0.00089822005,0.2164337,0.00004176237,0.00015774173,0.000008731965,0.00043262137,0.0000016573841,0.7479575,3.4056723e-7,0.0016237813,0.028224604],"study_design_scores_gemma":[0.010633833,0.00034448307,0.2220906,0.00039433787,0.000081871,0.0000044351245,0.000017619708,0.00007898424,0.76595634,0.00005985159,0.00020254789,0.00013510251],"about_ca_topic_score_codex":0.0012764928,"about_ca_topic_score_gemma":0.0007001552,"teacher_disagreement_score":0.028089501,"about_ca_system_score_codex":0.00009776162,"about_ca_system_score_gemma":0.00014041943,"threshold_uncertainty_score":0.5598298},"labels":[],"label_agreement":null},{"id":"W2161275088","doi":"10.1093/jac/dkt329","title":"Mixed treatment comparison of prophylaxis against invasive fungal infections in neutropenic patients receiving therapy for haematological malignancies: a systematic review","year":2013,"lang":"en","type":"review","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto Public Health","funders":"Rijksuniversiteit Groningen","keywords":"Medicine; Neutropenia; Hematologic Neoplasms; Intensive care medicine; Internal medicine; Chemotherapy; Cancer","score_opus":0.07594723077538267,"score_gpt":0.35537509593561617,"score_spread":0.2794278651602335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161275088","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0811644,0.9094396,0.000035459354,0.00009818658,0.00022681996,0.008963429,0.000038505972,0.0000112415855,0.000022316859],"genre_scores_gemma":[0.014321816,0.9843687,0.00058227015,0.0002799307,0.000085972424,0.00017396349,0.000046981757,0.00007030565,0.00007007245],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9947652,0.0005043094,0.0036007043,0.00038639328,0.00036099754,0.00038238298],"domain_scores_gemma":[0.9941089,0.0006701366,0.0037110911,0.0004891583,0.0008796735,0.00014101953],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000730352,0.00063321483,0.008267564,0.00036948643,0.00007340638,0.000035396675,0.00031273055,0.00042922221,0.000036767033],"category_scores_gemma":[0.00071228325,0.0003696435,0.0022092813,0.00051493244,0.00013299772,0.00013982956,0.000022578999,0.0005194177,0.000007852718],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043844726,0.0045733396,0.0048151603,0.9085821,0.0013020241,0.000025670488,0.0002568481,7.4910906e-7,0.00054298155,0.0000034925117,0.0022357686,0.0772234],"study_design_scores_gemma":[0.006019872,0.0073933187,0.00042710712,0.9653615,0.0020395638,0.00022107463,0.00007648619,0.0000019136667,0.0011351249,0.00000404536,0.016801037,0.0005189976],"about_ca_topic_score_codex":0.000010238109,"about_ca_topic_score_gemma":0.000031517637,"teacher_disagreement_score":0.076704405,"about_ca_system_score_codex":0.0006126971,"about_ca_system_score_gemma":0.0010212205,"threshold_uncertainty_score":0.99987555},"labels":[],"label_agreement":null},{"id":"W2161359562","doi":"10.1128/ec.00236-12","title":"Normal Adaptation of Candida albicans to the Murine Gastrointestinal Tract Requires Efg1p-Dependent Regulation of Metabolic and Host Defense Genes","year":2012,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Microbiology; Cecum; Mutant; Corpus albicans; Gene expression; Gastrointestinal tract; Gene; Genetics; Biochemistry","score_opus":0.01966054700669537,"score_gpt":0.250923265812894,"score_spread":0.2312627188061986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161359562","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946848,0.0018357763,0.0017840406,0.00019511813,0.000057246143,0.000307584,0.000015514432,0.000008467675,0.001111439],"genre_scores_gemma":[0.9967955,0.000052367723,0.0018965342,0.000043517633,0.000119850425,0.000004518895,0.000011346027,0.0000100158895,0.0010664013],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990009,0.00004769696,0.00031866654,0.00014183708,0.00028566382,0.00020523951],"domain_scores_gemma":[0.99924976,0.000111363355,0.00013830447,0.0002532872,0.00011854414,0.00012876837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042859215,0.00010793268,0.00024450183,0.00005822963,0.00004568171,0.0000045229144,0.00005336685,0.000026530133,0.00021009981],"category_scores_gemma":[0.00012956733,0.00007552436,0.00006209215,0.00012340897,0.000087018496,0.0000929782,0.000028794486,0.000081058446,0.000010221263],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037829322,0.00023089541,0.96171564,0.00013959917,0.000010905263,0.0000028883435,0.00097225764,0.000121089215,0.034370508,0.0001513239,0.00006410246,0.0018425279],"study_design_scores_gemma":[0.00047905894,0.00026641347,0.9765207,0.00006659443,0.00013968296,0.00005293706,0.0008401887,0.00036146323,0.021097321,0.0000059451895,0.000108178596,0.000061517254],"about_ca_topic_score_codex":0.00072463055,"about_ca_topic_score_gemma":0.0004557727,"teacher_disagreement_score":0.014805088,"about_ca_system_score_codex":0.000017707076,"about_ca_system_score_gemma":0.0000664403,"threshold_uncertainty_score":0.30797938},"labels":[],"label_agreement":null},{"id":"W2161793112","doi":"10.4049/jimmunol.1202937","title":"Enhanced Immunogenicity of a Tricomponent Mannan Tetanus Toxoid Conjugate Vaccine Targeted to Dendritic Cells via Dectin-1 by Incorporating β-Glucan","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Mannan; Toxoid; Immunogenicity; Laminarin; Microbiology; Biology; Immune system; Dendritic cell; Conjugate vaccine; Immunology; Immunization; Polysaccharide; Biochemistry","score_opus":0.008311808716103328,"score_gpt":0.24140244500715366,"score_spread":0.23309063629105034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161793112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9894035,0.0037182732,0.0046475516,0.0012254983,0.00032618525,0.00050750864,0.000006032781,0.000013283041,0.00015220515],"genre_scores_gemma":[0.9982015,0.0002869737,0.00077335467,0.00036390108,0.00006230122,0.000005989862,0.0000035532655,0.0000218495,0.0002805758],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976172,0.00037013655,0.0011821305,0.00016145779,0.00029297415,0.00037609984],"domain_scores_gemma":[0.9975912,0.00031578066,0.0008397348,0.00046962724,0.00065108767,0.00013254996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000929051,0.00021701863,0.00082455867,0.00016258357,0.00012146198,0.00001125192,0.00038347192,0.0001229802,0.0003023887],"category_scores_gemma":[0.0003256252,0.00014081685,0.00020415404,0.0003177357,0.0001490063,0.00012083258,0.00010140233,0.0005731234,0.000056477416],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002300434,0.0002704395,0.0013946856,0.000035966492,0.00032743518,0.000013497683,0.00048486624,0.000009772187,0.9914461,0.000010094237,0.0005871483,0.0031196007],"study_design_scores_gemma":[0.0022533205,0.002384402,0.063640244,0.00013262103,0.0001868356,0.00027804298,0.0010216327,0.00003232976,0.9295769,0.000244466,0.00011145244,0.00013777456],"about_ca_topic_score_codex":0.0004631344,"about_ca_topic_score_gemma":0.000050356564,"teacher_disagreement_score":0.062245555,"about_ca_system_score_codex":0.00015721309,"about_ca_system_score_gemma":0.00016300286,"threshold_uncertainty_score":0.5742344},"labels":[],"label_agreement":null},{"id":"W2161820324","doi":"10.1091/mbc.e12-06-0477","title":"Reduced TOR signaling sustains hyphal development in<i>Candida albicans</i>by lowering Hog1 basal activity","year":2012,"lang":"en","type":"article","venue":"Molecular Biology of the Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Biology; Cell biology; Transcription factor; Mutant; Repressor; Candida albicans; Signal transduction; Genetics; Gene","score_opus":0.009168654756012666,"score_gpt":0.2648023409059775,"score_spread":0.25563368614996484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161820324","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960622,0.0007049191,0.0016106905,0.00026550103,0.00014900406,0.00025817595,0.0000047727035,0.00001139421,0.0009333136],"genre_scores_gemma":[0.9987711,0.000009018658,0.00048586002,0.00023596872,0.000029217963,0.000008503594,0.000008191688,0.00001367558,0.00043848818],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988965,0.00014321411,0.00022215904,0.0002165668,0.00012324465,0.00039835167],"domain_scores_gemma":[0.99941117,0.00005718492,0.000092870345,0.00029969998,0.00004275367,0.00009631895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004943254,0.00014119394,0.00029192338,0.000041077034,0.00006448463,0.000002694321,0.00014631802,0.0001352231,0.000050641083],"category_scores_gemma":[0.00012269987,0.00010304059,0.00011150483,0.00012626448,0.00015302477,0.000030162772,0.00009692737,0.0002491114,0.0000043862497],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001717996,0.0002112716,0.1016176,0.000058486967,0.000025415467,0.000004666023,0.00021872035,0.0000023468735,0.8969776,0.0000111863,0.000068136316,0.00063276204],"study_design_scores_gemma":[0.0005153463,0.00006148493,0.047478378,0.000034492834,0.000023742614,0.0000017994541,0.000103711034,0.0000048123457,0.9506262,0.00002532447,0.0010223201,0.00010236941],"about_ca_topic_score_codex":0.000067062225,"about_ca_topic_score_gemma":0.000016791284,"teacher_disagreement_score":0.05413922,"about_ca_system_score_codex":0.00013409324,"about_ca_system_score_gemma":0.00016228181,"threshold_uncertainty_score":0.42018732},"labels":[],"label_agreement":null},{"id":"W2161872635","doi":"10.1093/cid/cis305","title":"Septic Shock Attributed to Candida Infection: Importance of Empiric Therapy and Source Control","year":2012,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":462,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Medicine; Septic shock; Odds ratio; Internal medicine; Mortality rate; Population; Retrospective cohort study; Logistic regression; Confidence interval; Blood culture; Intensive care medicine; Sepsis; Microbiology; Antibiotics; Biology","score_opus":0.054611955384846984,"score_gpt":0.37953111277278234,"score_spread":0.32491915738793536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161872635","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99480146,0.002708427,0.0010099413,0.00025767065,0.00024452838,0.00057298597,0.000036886333,0.00011134682,0.00025674707],"genre_scores_gemma":[0.99609315,0.0005488716,0.00001120622,0.0027086944,0.00037395433,0.00003217504,0.000013640276,0.000020071937,0.00019825583],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984398,0.00015530518,0.00059160445,0.00029734697,0.00019496249,0.00032098245],"domain_scores_gemma":[0.9980371,0.0005947016,0.00015128145,0.0003658974,0.0001869786,0.00066403666],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046435808,0.00017333066,0.0006311039,0.00006446763,0.00008936646,0.000012743352,0.000040635725,0.00012802167,0.00024416205],"category_scores_gemma":[0.0016197194,0.00013738846,0.00025997727,0.00027324035,0.00023482957,0.00010435155,0.000029463952,0.00018869585,0.000034238146],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039465202,0.001014643,0.98941004,0.000073556046,0.00015372307,0.0000031940176,0.000037073092,0.0000043705495,0.00010809934,0.000026790804,0.0019482394,0.0068255933],"study_design_scores_gemma":[0.0024712435,0.0009303518,0.99138486,0.000049313305,0.00020836476,0.000006696363,0.0000177886,0.000028241422,0.00003783428,0.00006479943,0.004661519,0.0001389861],"about_ca_topic_score_codex":0.00006909033,"about_ca_topic_score_gemma":0.000118732474,"teacher_disagreement_score":0.0066866074,"about_ca_system_score_codex":0.000052364,"about_ca_system_score_gemma":0.0001205714,"threshold_uncertainty_score":0.56025386},"labels":[],"label_agreement":null},{"id":"W2161908501","doi":"10.1128/aac.03050-14","title":"Phase 1b Study of New Posaconazole Tablet for Prevention of Invasive Fungal Infections in High-Risk Patients with Neutropenia","year":2014,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":108,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juravinski Hospital; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Posaconazole; Neutropenia; Medicine; Mucositis; Pharmacokinetics; Dosing; Internal medicine; Nausea; Pharmacology; Gastroenterology; Chemotherapy; Antifungal; Voriconazole; Dermatology","score_opus":0.01148178279930801,"score_gpt":0.276525693902587,"score_spread":0.265043911103279,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161908501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99820215,0.0000068744866,0.00044678207,0.00008121263,0.000036584923,0.0011528492,0.000038631508,0.0000068659815,0.000028078455],"genre_scores_gemma":[0.99908715,0.00011407728,0.00029041196,0.00023393356,0.00003287799,0.000007555278,0.00004408754,0.000015979138,0.0001739019],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991898,0.000039067403,0.0003020314,0.00022252092,0.00010685082,0.0001397166],"domain_scores_gemma":[0.9994176,0.000037067763,0.0001974647,0.000168803,0.00012403054,0.000055027707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011211936,0.00012316603,0.00036873648,0.00007166799,0.00004932066,0.000007663994,0.000046165253,0.000052378564,0.000037275444],"category_scores_gemma":[0.00002666362,0.00009572498,0.000053165575,0.00013502456,0.000048397018,0.00008270163,0.000012545514,0.000075470496,4.9862956e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027120332,0.010814976,0.96765816,0.00011810885,0.00011929206,5.008307e-7,0.00065369863,0.000005633331,0.0052258163,0.000011522506,0.0011881626,0.011492064],"study_design_scores_gemma":[0.0544594,0.008772567,0.9247821,0.00014718085,0.00013062567,7.6145244e-7,0.00014167614,0.000020875606,0.01099528,0.000047258607,0.00039301018,0.00010929236],"about_ca_topic_score_codex":0.00070395146,"about_ca_topic_score_gemma":0.0009866405,"teacher_disagreement_score":0.051747367,"about_ca_system_score_codex":0.000015855872,"about_ca_system_score_gemma":0.00005707591,"threshold_uncertainty_score":0.39035514},"labels":[],"label_agreement":null},{"id":"W2161970873","doi":"10.1128/ec.00090-07","title":"Barrier Activity in <i>Candida albicans</i> Mediates Pheromone Degradation and Promotes Mating","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Rhode Island Foundation","keywords":"Candida albicans; Biology; Pheromone; Mating type; Cell biology; Mating; Saccharomyces cerevisiae; Mutant; Corpus albicans; Microbiology; Biochemistry; Yeast; Gene; Genetics","score_opus":0.011271801236115174,"score_gpt":0.25540425018147994,"score_spread":0.24413244894536476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161970873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917292,0.00037494703,0.0006214158,0.00020180197,0.000058053083,0.00032281622,0.0000035033117,0.000035153804,0.0066531384],"genre_scores_gemma":[0.99714446,0.00004882292,0.0012015565,0.0001245198,0.00006864494,0.0000037846532,0.000011640101,0.000015074281,0.0013815183],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989176,0.000038203452,0.00024108261,0.0002819375,0.00022749319,0.00029373143],"domain_scores_gemma":[0.9993261,0.00022510612,0.00006867743,0.00019164948,0.00003687678,0.00015155078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007093854,0.00013362055,0.0002493945,0.00006973334,0.000057273694,0.0000146757975,0.000041478375,0.000084538675,0.0001654102],"category_scores_gemma":[0.0001974791,0.000115675124,0.000038102382,0.00019216204,0.00009649544,0.00011960263,0.000027350652,0.00021509806,0.000014033492],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018161097,0.0001813563,0.9122036,0.00019081158,0.000006851926,0.000054658343,0.0004200125,4.896304e-7,0.07630077,0.000011539329,0.000055845692,0.010392422],"study_design_scores_gemma":[0.0008497153,0.00011682737,0.9052411,0.000078951176,0.00002558507,0.000006523586,0.00032900812,0.00026014782,0.092868805,0.00009099267,0.000022873088,0.00010950128],"about_ca_topic_score_codex":0.00026862192,"about_ca_topic_score_gemma":0.0009542077,"teacher_disagreement_score":0.01656804,"about_ca_system_score_codex":0.000077512006,"about_ca_system_score_gemma":0.00006578283,"threshold_uncertainty_score":0.47170946},"labels":[],"label_agreement":null},{"id":"W2162462125","doi":"10.1073/pnas.102291099","title":"Population genomics of drug resistance in <i>Candida albicans</i>","year":2002,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":140,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"","keywords":"Biology; Gene expression; Major facilitator superfamily; Genetics; Drug resistance; Fluconazole; Candida albicans; Population; Gene expression profiling; Multiple drug resistance; Gene; Antifungal drug; Microbiology; Transporter; Medicine; Antifungal","score_opus":0.03668311200074365,"score_gpt":0.2965431813729065,"score_spread":0.2598600693721628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162462125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98241484,0.00040661686,2.913497e-7,0.0028607245,0.000007360418,0.00014901553,0.00000695587,0.000003504086,0.014150712],"genre_scores_gemma":[0.99760485,0.00008768364,0.0011802585,0.0001659515,0.00002390566,0.0000023537284,1.1774279e-7,0.0000023796088,0.00093247736],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985537,0.000004636691,0.0003782269,0.00016706923,0.0007938313,0.00010254933],"domain_scores_gemma":[0.99939597,0.000070093854,0.00032370182,0.000009556488,0.00017733718,0.000023339939],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009024779,0.000058272202,0.00019055953,0.00011543404,0.000054777625,0.000003962162,0.00025015845,0.000047417052,0.00002827706],"category_scores_gemma":[0.00046981362,0.000040345432,0.00006200975,0.000652,0.0004827886,0.00018769501,0.000033101438,0.00011481984,4.857141e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001037012,0.00013027762,0.77897424,0.00030964945,0.000009053691,1.1897531e-8,0.00065775315,0.000017506432,0.19112945,0.027028881,0.001351851,0.00028762902],"study_design_scores_gemma":[0.00027004053,0.000018893392,0.9248767,0.00021952348,0.000010196259,0.0000010215255,0.00017700532,0.00033495284,0.05439528,0.019424757,0.0002246744,0.000046971065],"about_ca_topic_score_codex":0.000022048682,"about_ca_topic_score_gemma":0.0000040976233,"teacher_disagreement_score":0.14590244,"about_ca_system_score_codex":0.000063078565,"about_ca_system_score_gemma":0.000019058534,"threshold_uncertainty_score":0.17788547},"labels":[],"label_agreement":null},{"id":"W2162566576","doi":"10.1091/mbc.12.11.3631","title":"Signaling through Adenylyl Cyclase Is Essential for Hyphal Growth and Virulence in the Pathogenic Fungus<i>Candida albicans</i>","year":2001,"lang":"en","type":"article","venue":"Molecular Biology of the Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":345,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Biology; Adenylyl cyclase; Candida albicans; cAMP-dependent pathway; Corpus albicans; ADCY10; Mutant; Fungal protein; Saccharomyces cerevisiae; Microbiology; Cell biology; Signal transduction; Gene; Gs alpha subunit; Genetics","score_opus":0.010334640297991474,"score_gpt":0.27537381160606,"score_spread":0.26503917130806853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162566576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899415,0.0026911101,0.0046035666,0.001605056,0.00006480451,0.00047437384,0.000029075169,0.0000061457176,0.0005843785],"genre_scores_gemma":[0.9967236,0.00025248984,0.00050531153,0.0023373892,0.000042639233,0.00001832664,0.000010290438,0.000010270003,0.00009967853],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897057,0.000150566,0.00023288465,0.00028860033,0.000112360154,0.00024500568],"domain_scores_gemma":[0.9993671,0.00013230497,0.00008760308,0.00033804946,0.000042963016,0.000031967313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002915946,0.0001298238,0.00024201894,0.000023337292,0.00008090249,0.0000058828864,0.00021606246,0.00012184585,0.000026853877],"category_scores_gemma":[0.00010175326,0.000076098906,0.0001641474,0.00014367157,0.00034159533,0.000022215334,0.000055252247,0.0001641311,0.0000014926205],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032290953,0.00010695558,0.037265413,0.00008269524,0.000022762953,0.000027100901,0.0004208655,0.0000017091126,0.9611657,0.00031045487,0.00008685678,0.00018653659],"study_design_scores_gemma":[0.0016922583,0.00034411054,0.009972451,0.00006408567,0.00017048996,0.000045352608,0.0004054463,0.00006386977,0.9809665,0.0052167466,0.0009143089,0.0001443442],"about_ca_topic_score_codex":0.00009833419,"about_ca_topic_score_gemma":0.000030072048,"teacher_disagreement_score":0.027292961,"about_ca_system_score_codex":0.000012444735,"about_ca_system_score_gemma":0.000055217493,"threshold_uncertainty_score":0.31032234},"labels":[],"label_agreement":null},{"id":"W2163811015","doi":"10.1016/s0966-842x(02)00002-1","title":"Candida biofilms and their role in infection","year":2003,"lang":"en","type":"review","venue":"Trends in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1141,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Biofilm; Microbiology; Candida albicans; Biology; Fluconazole; Hypha; Amphotericin B; Antifungal; Candida infections; Bacteria","score_opus":0.03407321368086098,"score_gpt":0.33991562421736576,"score_spread":0.3058424105365048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163811015","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012275083,0.98471177,9.919979e-7,0.00001365169,0.00012891435,0.00020644709,0.000048830912,0.00001431399,0.0026000056],"genre_scores_gemma":[0.005259823,0.9929379,0.000028092976,0.000057893798,0.000032954802,0.000025421412,0.00035578688,0.00001997593,0.0012821174],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985462,0.0002382847,0.0004560805,0.0004453782,0.00001613988,0.00029795818],"domain_scores_gemma":[0.99950165,0.000074469215,0.00010594413,0.00026066866,0.000013275819,0.00004398908],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028807425,0.00028790793,0.0014633933,0.0005563322,0.000019216825,0.0000047513927,0.00005037838,0.0005692647,0.00021096165],"category_scores_gemma":[0.000032130152,0.00019654368,0.00016765586,0.0004800368,0.00014411806,0.000018051083,0.00003135445,0.00053959235,0.000019539753],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025443987,0.000090265006,0.01726131,0.0017945956,0.000036638266,0.000019942641,0.00007037831,3.0048785e-8,0.00042228645,0.000025466612,0.00028376863,0.97996986],"study_design_scores_gemma":[0.0004741787,0.00012608504,0.003443543,0.0021319606,0.000075525575,0.00023054628,0.00001973013,3.6660742e-7,0.00001715768,0.000020981593,0.99326843,0.00019150348],"about_ca_topic_score_codex":0.0003070125,"about_ca_topic_score_gemma":0.004043225,"teacher_disagreement_score":0.99298465,"about_ca_system_score_codex":0.00018540944,"about_ca_system_score_gemma":0.00011248699,"threshold_uncertainty_score":0.8014819},"labels":[],"label_agreement":null},{"id":"W2163859998","doi":"10.1067/mtc.2000.105749","title":"Successful local excision and long-term survival for invasive pulmonary aspergillosis during neutropenia after bone marrow transplantation","year":2000,"lang":"en","type":"article","venue":"Journal of Thoracic and Cardiovascular Surgery","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Medicine; Neutropenia; Aspergillosis; Wedge resection; Surgery; Pneumonectomy; Lung; Transplantation; Internal medicine; Resection; Chemotherapy; Immunology","score_opus":0.013420624412721655,"score_gpt":0.2630469467620937,"score_spread":0.24962632234937207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2163859998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9662853,0.031082073,0.0020884355,0.00010518661,0.00013634065,0.00022043583,0.00001286311,0.000009008432,0.000060369926],"genre_scores_gemma":[0.96804965,0.03135254,0.00009371766,0.00004426157,0.0002752703,0.000008912745,0.000010901311,0.000024902769,0.00013986096],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982314,0.00017754096,0.0005454395,0.0002847013,0.00051492394,0.0002459892],"domain_scores_gemma":[0.99899626,0.0002406161,0.0001118834,0.00023231223,0.00019842495,0.00022049656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013574752,0.00019569979,0.00091037253,0.00015162006,0.00011903437,0.000043314194,0.000045163168,0.00013038646,0.00009880166],"category_scores_gemma":[0.000057021378,0.0001541116,0.0010282362,0.0001235728,0.00012824408,0.00036025685,0.000013445792,0.00020753997,0.0000019964998],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011644917,0.0001121143,0.7491105,0.0019416601,0.00088953035,0.0042381915,0.00012342099,0.000033240463,0.0019972406,4.935719e-7,0.000017787457,0.22989088],"study_design_scores_gemma":[0.0006355173,0.00009539873,0.99086547,0.00080213795,0.0012640555,0.0030591069,0.00014053687,0.000012572488,0.002827654,0.000018108729,0.000099167926,0.00018029002],"about_ca_topic_score_codex":0.000011219106,"about_ca_topic_score_gemma":0.000015395703,"teacher_disagreement_score":0.24175492,"about_ca_system_score_codex":0.000040134873,"about_ca_system_score_gemma":0.00009006055,"threshold_uncertainty_score":0.6284489},"labels":[],"label_agreement":null},{"id":"W2164048622","doi":"10.1128/ec.00387-06","title":"Identification and Characterization of <i>MFA1</i> , the Gene Encoding <i>Candida albicans</i> <b>a</b> -Factor Pheromone","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Canadian Institutes of Health Research; Science Foundation Ireland","keywords":"Biology; Candida albicans; Gene; Corpus albicans; Genetics; Open reading frame; Saccharomyces cerevisiae; Mating type; Fungal protein; Schizosaccharomyces pombe; Peptide sequence","score_opus":0.011383092395033897,"score_gpt":0.24247211690257006,"score_spread":0.23108902450753616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164048622","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921096,0.00024576005,0.0051135877,0.00025632873,0.00013445925,0.00032586552,0.000015274753,0.000023917988,0.0017752236],"genre_scores_gemma":[0.9972171,0.00023210685,0.00010351213,0.0002344172,0.00011193211,0.0000026481225,0.00003921198,0.000014179643,0.0020448444],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99893135,0.00003070639,0.00037371722,0.00022471324,0.00025194313,0.00018759177],"domain_scores_gemma":[0.9992376,0.00009971508,0.00016526332,0.00032051333,0.00009119018,0.000085692416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047591032,0.00010989952,0.00020031443,0.000041586427,0.00007783893,0.00001579293,0.000073187024,0.000062457155,0.00011654397],"category_scores_gemma":[0.00004614154,0.00007983841,0.00005629528,0.00018783726,0.00012911085,0.0000850533,0.000025165067,0.00011912466,0.0000133212325],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000099492674,0.00008392952,0.21986343,0.000091048765,0.000009240761,0.000005517403,0.0003760894,1.5671482e-7,0.7773715,0.000031538617,0.000031085685,0.0020369443],"study_design_scores_gemma":[0.00029380576,0.00004883942,0.62012166,0.000023098497,0.000040404346,0.0000058128385,0.00010686166,0.000035571597,0.37916344,0.000012475273,0.00009591707,0.000052121195],"about_ca_topic_score_codex":0.000029110004,"about_ca_topic_score_gemma":0.000024437513,"teacher_disagreement_score":0.4002582,"about_ca_system_score_codex":0.000038015263,"about_ca_system_score_gemma":0.000044427627,"threshold_uncertainty_score":0.32557163},"labels":[],"label_agreement":null},{"id":"W2164149772","doi":"10.1128/aac.01519-13","title":"Interlaboratory Variability of Caspofungin MICs for Candida spp. Using CLSI and EUCAST Methods: Should the Clinical Laboratory Be Testing This Agent?","year":2013,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":208,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; University of Alberta","funders":"Centers for Disease Control and Prevention","keywords":"Caspofungin; Microbiology; Candida glabrata; Corpus albicans; Micafungin; Biology; Broth microdilution; Candida albicans; Veterinary medicine; Antifungal; Amphotericin B; Medicine; Antimicrobial; Minimum inhibitory concentration","score_opus":0.11303683381118237,"score_gpt":0.40665123065962666,"score_spread":0.29361439684844426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164149772","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947539,0.00014849524,0.002053062,0.0017436276,0.00018308898,0.0009071133,0.00009527806,0.000021714986,0.00009374835],"genre_scores_gemma":[0.95080906,0.00046307035,0.038068663,0.010256063,0.00018577586,0.000010481481,0.000011220146,0.000038154492,0.00015750447],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99832207,0.00022786303,0.000604662,0.0004357551,0.000121703655,0.00028794384],"domain_scores_gemma":[0.998248,0.0005919866,0.00022355448,0.00037065038,0.00042796956,0.00013785886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016537397,0.00022453208,0.0005454609,0.000037733684,0.00017673371,0.000049527724,0.00011031854,0.00019069393,0.0001601089],"category_scores_gemma":[0.00045997906,0.0001550521,0.00012056615,0.0002087434,0.00047170336,0.000115929186,0.000054557113,0.00025421652,0.0000012086742],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040727694,0.00034542743,0.821013,0.0004666775,0.0002290977,0.0000035285645,0.0008566718,6.6596306e-7,0.13368586,0.000026815609,0.019864438,0.023100572],"study_design_scores_gemma":[0.006191878,0.00086281105,0.89414525,0.0005616937,0.00058447337,0.00003874536,0.0013251082,0.0047895033,0.03787082,0.00031186992,0.052556466,0.00076135254],"about_ca_topic_score_codex":0.00037242798,"about_ca_topic_score_gemma":0.000031674714,"teacher_disagreement_score":0.09581503,"about_ca_system_score_codex":0.000041993615,"about_ca_system_score_gemma":0.00020132354,"threshold_uncertainty_score":0.6322841},"labels":[],"label_agreement":null},{"id":"W2164181596","doi":"10.1080/13693780600930186","title":"Successful treatment of invasive<i>Rhizopus</i>infection in a child with thalassemia","year":2006,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; McGill University Health Centre; Montreal Children's Hospital","funders":"","keywords":"Rhizopus; Amphotericin B; Thalassemia; Treatment modality; Medicine; Modalities; Mucormycosis; Surgery; Biology; Internal medicine; Dermatology; Antifungal","score_opus":0.006694850665059145,"score_gpt":0.2609317496478939,"score_spread":0.25423689898283475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164181596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863694,0.00024142413,0.000083004416,0.0014657826,0.00007185009,0.00031293728,0.0000026518553,0.00002592107,0.011427065],"genre_scores_gemma":[0.99892974,0.0003543757,0.000075504795,0.00014899211,0.00013641772,0.000036969435,0.00002774476,0.000009590352,0.00028066442],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988186,0.00007739276,0.00030745633,0.00025270815,0.00030128786,0.00024256903],"domain_scores_gemma":[0.99935913,0.000213778,0.0000708658,0.00019248614,0.000053944103,0.00010978319],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001602416,0.00012213438,0.00044830277,0.000108066575,0.000028306797,0.0000020318869,0.000043884625,0.00021014082,0.00072282495],"category_scores_gemma":[0.00021758943,0.00007986581,0.0000662576,0.00025177095,0.00024370603,0.000032975913,0.000011990443,0.00015387611,0.00001575397],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063284364,0.001152663,0.99426246,0.000082871484,0.000026334083,0.0005978923,0.000051109528,0.00000219849,0.00095218397,0.0003779078,0.00030902794,0.0015525327],"study_design_scores_gemma":[0.0031308266,0.0021704892,0.98786753,0.00014853627,0.0000511787,0.00023684824,0.00003935722,0.000019612726,0.004729752,0.0001620225,0.0013741426,0.00006967536],"about_ca_topic_score_codex":0.003463646,"about_ca_topic_score_gemma":0.024314024,"teacher_disagreement_score":0.020850377,"about_ca_system_score_codex":0.00016648076,"about_ca_system_score_gemma":0.0003269756,"threshold_uncertainty_score":0.9934897},"labels":[],"label_agreement":null},{"id":"W2164268896","doi":"10.1128/jcm.01447-10","title":"<i>Candida bracarensis</i> Bloodstream Infection in an Immunocompromised Patient","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Candida glabrata; Bloodstream infection; Biology; Opportunistic pathogen; Microbiology; Candida infections; Pathogen; Organism; Opportunistic infection; Internal transcribed spacer; Mycosis; Human pathogen; Virology; Immunology; Candida albicans; Genetics; Viral disease; Gene; Human immunodeficiency virus (HIV); Ribosomal RNA; Virulence","score_opus":0.02664079489891057,"score_gpt":0.37611104690846026,"score_spread":0.3494702520095497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164268896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99794155,0.00008099199,0.00001578825,0.00034028103,0.0012452898,0.00014948154,0.000004683937,0.000007865886,0.00021403733],"genre_scores_gemma":[0.9978685,0.00012655715,0.0008187136,0.00076212065,0.00037681474,9.768629e-7,0.000009788218,0.000008870654,0.00002767667],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99785316,0.0002403884,0.0014682184,0.00018945363,0.000054898534,0.00019388492],"domain_scores_gemma":[0.99838406,0.00031132207,0.00056637597,0.00025250408,0.00032347348,0.0001622499],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011274749,0.00011172892,0.0007056525,0.00010176999,0.00002724437,0.000008320567,0.00008794536,0.0003497421,0.00014940048],"category_scores_gemma":[0.00101475,0.000079785605,0.00030876673,0.00010369722,0.0002201388,0.000092031696,0.000026287864,0.0013586275,0.000013084924],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013049445,0.0007569813,0.63782465,0.000009629958,0.000030231515,0.00003982467,0.0000316109,5.853512e-7,0.34677038,0.000007791576,0.00022072409,0.01300264],"study_design_scores_gemma":[0.003632261,0.0033638803,0.97603226,0.00006397834,0.00006158353,0.00045935513,0.00003175494,0.0000052699243,0.00816036,0.000111564324,0.007989475,0.000088270346],"about_ca_topic_score_codex":0.000044782235,"about_ca_topic_score_gemma":0.00074653886,"teacher_disagreement_score":0.33861,"about_ca_system_score_codex":0.000022644806,"about_ca_system_score_gemma":0.00028583576,"threshold_uncertainty_score":0.5902636},"labels":[],"label_agreement":null},{"id":"W2164315014","doi":"10.1128/ec.00002-09","title":"Identification of the <i>Candida albicans</i> Cap1p Regulon","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Regulon; Chromatin immunoprecipitation; Transcription factor; Gene; Candida albicans; Genetics; Chromatin; Transcriptional regulation; Leucine zipper; Cell biology; Computational biology; Promoter; Gene expression","score_opus":0.006425154217999275,"score_gpt":0.23452998827589353,"score_spread":0.22810483405789425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164315014","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97488016,0.00034820614,0.0002860676,0.002316254,0.00012970384,0.0002654543,0.000004113765,0.000021701644,0.021748358],"genre_scores_gemma":[0.9853548,0.000029980365,0.00005473309,0.0005330152,0.000052212115,0.0000013805462,0.0000047761437,0.0000059670565,0.013963145],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991221,0.000036753547,0.0002822428,0.00017757219,0.0002460005,0.00013533312],"domain_scores_gemma":[0.9991835,0.000028308968,0.00011229001,0.00054925797,0.00007288536,0.000053810763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021468656,0.00007900195,0.00016493046,0.000023093287,0.00006243005,0.000006492268,0.00011798889,0.000048430393,0.00008234681],"category_scores_gemma":[0.00006708681,0.000053965032,0.000117883435,0.0001886162,0.000090439775,0.000038627928,0.000013295303,0.000111836634,0.000024448986],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031218826,0.0009945184,0.47452766,0.00026603346,0.000023560799,0.000012928728,0.0006607439,0.000018503913,0.49938908,0.0016559826,0.015367614,0.006771192],"study_design_scores_gemma":[0.00040146956,0.000073582756,0.8823432,0.000037182523,0.000041389558,0.0000035752025,0.00010666229,0.000055713757,0.11607653,0.0004434645,0.0003670707,0.000050160754],"about_ca_topic_score_codex":0.000056504847,"about_ca_topic_score_gemma":0.000028465058,"teacher_disagreement_score":0.40781555,"about_ca_system_score_codex":0.00003634495,"about_ca_system_score_gemma":0.00013612003,"threshold_uncertainty_score":0.220063},"labels":[],"label_agreement":null},{"id":"W2164379895","doi":"10.1128/jcm.02012-14","title":"First Report of Westerdykella dispersa as a Cause of an Angioinvasive Fungal Infection in a Neutropenic Host","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Johns Hopkins University","keywords":"Host (biology); Neutropenia; Leukopenia; Intensive care medicine; Immunology; Biology; Medicine; Microbiology; Internal medicine; Ecology; Chemotherapy","score_opus":0.038720472128674875,"score_gpt":0.3802868910774003,"score_spread":0.34156641894872547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164379895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99848926,0.00011535889,0.00009160751,0.0004935645,0.00036909134,0.0001522731,0.000005895688,0.000003350812,0.00027960847],"genre_scores_gemma":[0.9987975,0.00025305327,0.00034166317,0.00021317272,0.0002526431,6.460429e-7,0.0000064173564,0.000010268982,0.00012464901],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969025,0.00033548032,0.0022718303,0.00022510358,0.00008222534,0.00018283507],"domain_scores_gemma":[0.9967651,0.00079348724,0.0015222327,0.00034613156,0.00042586046,0.00014722148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023467275,0.00012309794,0.0011663734,0.00014612767,0.00001811126,0.0000032013706,0.00011479604,0.0002886761,0.00007486394],"category_scores_gemma":[0.0034665489,0.00008921921,0.00045571325,0.00014965216,0.00036053752,0.00009114308,0.000034843702,0.0005168752,0.0000069339508],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002625503,0.00082915655,0.91490364,0.000108356,0.000118606986,0.0003475727,0.000101083904,0.000006908784,0.08035149,0.000036460347,0.00012478985,0.00044642517],"study_design_scores_gemma":[0.0027641559,0.0059407214,0.9808965,0.00033360053,0.00016940209,0.0031249262,0.00006637536,0.000011232957,0.0049624234,0.00007634117,0.0015743336,0.0000800411],"about_ca_topic_score_codex":0.00015228102,"about_ca_topic_score_gemma":0.0016724133,"teacher_disagreement_score":0.07538906,"about_ca_system_score_codex":0.000040810337,"about_ca_system_score_gemma":0.00028455522,"threshold_uncertainty_score":0.41500333},"labels":[],"label_agreement":null},{"id":"W2164382691","doi":"10.1086/343743","title":"An Unusual Case of Pulmonary Invasive Aspergillosis and Aspergilloma Cured with Voriconazole in a Patient with Cystic Fibrosis","year":2002,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Voriconazole; Itraconazole; Medicine; Cystic fibrosis; Aspergilloma; Aspergillosis; Amphotericin B; Complication; Antifungal; Allergic bronchopulmonary aspergillosis; Mycosis; Surgery; Internal medicine; Dermatology; Immunology","score_opus":0.02012976729735794,"score_gpt":0.30384573351643185,"score_spread":0.2837159662190739,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164382691","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764216,0.0010703398,0.00002476396,0.000058976377,0.000036293422,0.0004684772,0.00007629847,0.000056907687,0.00056577387],"genre_scores_gemma":[0.9992249,0.00032467578,0.000058612506,0.00022358472,0.000055465676,0.00003844309,0.000020379934,0.000025934602,0.000027975057],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982405,0.00019026831,0.0005646956,0.0005267225,0.00022152692,0.0002563445],"domain_scores_gemma":[0.99813944,0.0006615983,0.00016734049,0.00041314142,0.00018547861,0.00043302868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011984146,0.00022238719,0.0006234355,0.00011011492,0.00008325592,0.000016576241,0.000047131434,0.00011930179,0.00011354332],"category_scores_gemma":[0.00056856597,0.00015463468,0.00011220444,0.00036116093,0.0005308896,0.00016848266,0.000032064974,0.00022237668,0.000005602129],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011531487,0.0039244746,0.9781677,0.00022568411,0.0000991087,0.0062561384,0.00014050811,0.000026597352,0.00013996323,0.000032831267,0.00004537527,0.009788457],"study_design_scores_gemma":[0.0022661956,0.0066889087,0.98762596,0.00033700268,0.00037160784,0.00084216835,0.0005350287,0.0008962446,0.00012806006,0.000065539025,0.000017951123,0.00022534771],"about_ca_topic_score_codex":0.00020643638,"about_ca_topic_score_gemma":0.0009493854,"teacher_disagreement_score":0.00956311,"about_ca_system_score_codex":0.00005621556,"about_ca_system_score_gemma":0.0000993045,"threshold_uncertainty_score":0.6305819},"labels":[],"label_agreement":null},{"id":"W2164641098","doi":"10.1016/j.urology.2004.04.071","title":"Successful treatment of primary bilateral renal mucormycosis with bilateral nephrectomy","year":2004,"lang":"en","type":"article","venue":"Urology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; London Health Sciences Centre","funders":"","keywords":"Medicine; Mucormycosis; Nephrectomy; Bilateral Nephrectomy; Surgery; Amphotericin B; Kidney; Internal medicine; Antifungal","score_opus":0.01335604724421966,"score_gpt":0.24690994575250017,"score_spread":0.2335538985082805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164641098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957208,0.00027596613,0.0003180021,0.0010604954,0.000056430043,0.00028240067,0.000011814139,0.000044185497,0.0022299094],"genre_scores_gemma":[0.9979551,0.00008051091,0.0008224177,0.00056289264,0.00008138965,0.00001484628,0.000045261844,0.00001599145,0.00042160554],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989681,0.000031909727,0.0002525846,0.00030230076,0.00015229396,0.00029277912],"domain_scores_gemma":[0.99937546,0.000046282905,0.00007674363,0.00032585068,0.000072450086,0.000103194245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000056583838,0.00016627312,0.00046130922,0.00009663673,0.00003908222,0.0000047341987,0.00005907476,0.00011467328,0.00020108723],"category_scores_gemma":[0.000012267187,0.00010465338,0.00010452956,0.00014752579,0.00021517708,0.00006118802,0.000015079208,0.00008889473,0.00002503347],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0071364874,0.0010291832,0.95352167,0.00006798053,0.00022017643,0.00044214292,0.0005426973,0.00015860515,0.032352682,0.00021117396,0.00004928829,0.0042679007],"study_design_scores_gemma":[0.010184789,0.014351435,0.94260275,0.000040916144,0.0003562035,0.00026259347,0.00003441179,0.00003563622,0.024559423,0.0005526982,0.006781641,0.00023750565],"about_ca_topic_score_codex":0.0003280247,"about_ca_topic_score_gemma":0.00029068132,"teacher_disagreement_score":0.013322252,"about_ca_system_score_codex":0.00014966619,"about_ca_system_score_gemma":0.00021876076,"threshold_uncertainty_score":0.4267641},"labels":[],"label_agreement":null},{"id":"W2164701672","doi":"10.1186/cc5271","title":"Fungal infections in the intensive care unit? Another approach for defining a target group of patients who benefit from implementing preemptive antimycotic treatment","year":2007,"lang":"en","type":"article","venue":"Critical Care","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Sepsis; Intensive care medicine; Intensive care unit; Antifungal; Candida infections; Intensive care; Internal medicine","score_opus":0.038570703451311826,"score_gpt":0.33971697130701256,"score_spread":0.30114626785570076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164701672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98997855,0.0009208157,0.0052020815,0.000043591703,0.000051802373,0.000912059,0.0006539735,0.000015224786,0.0022219017],"genre_scores_gemma":[0.9964563,0.0000042996,0.002373712,0.0002934156,0.00004916598,0.0000595912,0.0007333283,0.000019254334,0.000010894855],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99869883,0.00004955218,0.0003355841,0.00030950748,0.00021930481,0.00038722766],"domain_scores_gemma":[0.9978999,0.0006585212,0.00004423024,0.0002486552,0.0010860782,0.00006263468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016524347,0.00016153714,0.0003348589,0.00007847323,0.00014106705,0.000015415093,0.00007026409,0.00009600336,0.000031205054],"category_scores_gemma":[0.00081262644,0.000114046445,0.00016408865,0.00018284227,0.00013613634,0.00006286004,0.000032438744,0.0001526612,0.0000012309741],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033599677,0.00025917863,0.9778346,0.00029202615,0.000035971807,0.0000075636967,0.017210681,0.0000025294491,0.00009256538,0.0015561306,0.000017534716,0.0023552498],"study_design_scores_gemma":[0.0017638281,0.0012650681,0.81388974,0.0001308341,0.00019255257,0.0000011203063,0.18158461,0.00006129797,0.0006561822,0.00017475308,0.00016910903,0.000110893605],"about_ca_topic_score_codex":0.00033137845,"about_ca_topic_score_gemma":0.0009821929,"teacher_disagreement_score":0.16437393,"about_ca_system_score_codex":0.00017448608,"about_ca_system_score_gemma":0.0000496175,"threshold_uncertainty_score":0.46506792},"labels":[],"label_agreement":null},{"id":"W2164864726","doi":"10.1128/aac.45.9.2420-2426.2001","title":"In Vitro and In Vivo Activities of Syn2836, Syn2869, Syn2903, and Syn2921: New Series of Triazole Antifungal Agents","year":2001,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NAEJA-RGM Pharmaceuticals (Canada)","funders":"","keywords":"In vivo; Azole; Microbiology; Itraconazole; Candida albicans; Cryptococcus neoformans; Fluconazole; Candida parapsilosis; Biology; Amphotericin B; In vitro; Trichophyton; Triazole; Cryptococcosis; Chemistry; Antifungal; Biochemistry","score_opus":0.016062459726105364,"score_gpt":0.27039957671096865,"score_spread":0.2543371169848633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164864726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99793106,0.00037225825,0.000014520789,0.00096123706,0.000056161854,0.0003558113,0.000032914526,0.000009578943,0.00026647552],"genre_scores_gemma":[0.9876968,0.009898746,0.00024598045,0.0008635089,0.00004193032,0.000002039441,0.000005486631,0.000022035623,0.0012234336],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99871904,0.000042883534,0.00045589302,0.0003518099,0.00015385271,0.00027653275],"domain_scores_gemma":[0.9994854,0.000051068866,0.00013808861,0.00019292136,0.000029774792,0.00010275257],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018333107,0.00022161662,0.0007033324,0.00017335039,0.000039251165,0.000019083061,0.00006234423,0.00014006278,0.00015583306],"category_scores_gemma":[0.000026348065,0.00019815784,0.00006627261,0.0002141342,0.00028473503,0.0002446505,0.00004244932,0.0001434388,3.858606e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043300358,0.00031786296,0.44490966,0.00038936207,0.000063773856,0.000053555246,0.0009855275,4.852001e-7,0.54222876,0.000015960808,0.002135126,0.0045698676],"study_design_scores_gemma":[0.005817238,0.0002526762,0.57642144,0.00053218135,0.00004264545,0.00008649844,0.0005751589,0.000045179644,0.41338828,0.00008184188,0.002525925,0.0002309463],"about_ca_topic_score_codex":0.00051097316,"about_ca_topic_score_gemma":0.00013499291,"teacher_disagreement_score":0.13151175,"about_ca_system_score_codex":0.000023696668,"about_ca_system_score_gemma":0.0000703522,"threshold_uncertainty_score":0.8080642},"labels":[],"label_agreement":null},{"id":"W2164985688","doi":"10.1111/j.1574-6968.2010.01956.x","title":"Effect of trace iron levels and iron withdrawal by chelation on the growth of Candida albicans and Candida vini","year":2010,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Beef Farmers of Ontario","funders":"","keywords":"Candida albicans; Lactoferrin; Deferiprone; Chelation; Yeast; Chemistry; Microbiology; Food spoilage; Biochemistry; Biology; Bacteria; Inorganic chemistry","score_opus":0.004060770085745794,"score_gpt":0.2266290557387749,"score_spread":0.2225682856530291,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164985688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99605453,0.00013804258,0.00001790274,0.003171258,0.00008449988,0.0003416771,0.00008729823,0.00000790342,0.00009689138],"genre_scores_gemma":[0.99908674,0.000011249831,0.000027820834,0.0007111607,0.000032071046,0.000005265099,0.00003101037,0.000009982647,0.0000846725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992425,0.00009673149,0.00019836881,0.00024057606,0.000050328672,0.00017153674],"domain_scores_gemma":[0.9992309,0.00038384795,0.00011871761,0.0001959196,0.000024366518,0.000046241206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003994489,0.00014256718,0.00031906096,0.000038690257,0.000058939164,0.0000037470668,0.00005859598,0.00014232608,0.000045694644],"category_scores_gemma":[0.000120664125,0.00008768611,0.000043697437,0.000055279095,0.0006873646,0.000027254233,0.000018438923,0.00030110808,0.0000015497152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003597648,0.000019820209,0.22628222,0.000090694935,0.000021327534,0.0000016528621,0.00023061952,1.2407784e-7,0.77121156,0.00002539497,0.0014815133,0.00027531217],"study_design_scores_gemma":[0.0015688065,0.0011103648,0.48070112,0.00007131857,0.00010014871,0.00003619737,0.00004755052,0.0000060368493,0.51590323,0.0000056344475,0.00032825858,0.00012132865],"about_ca_topic_score_codex":0.00048463896,"about_ca_topic_score_gemma":0.00034840117,"teacher_disagreement_score":0.25530833,"about_ca_system_score_codex":0.000019188297,"about_ca_system_score_gemma":0.000022247865,"threshold_uncertainty_score":0.35757357},"labels":[],"label_agreement":null},{"id":"W2165071617","doi":"10.1208/s12248-011-9267-8","title":"Physiologically Based Pharmacokinetic Model of Amphotericin B Disposition in Rats Following Administration of Deoxycholate Formulation (Fungizone®): Pooled Analysis of Published Data","year":2011,"lang":"en","type":"article","venue":"The AAPS Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Physiologically based pharmacokinetic modelling; Pharmacokinetics; Pharmacology; Distribution (mathematics); Kidney; Amphotericin B; Pharmacodynamics; Chemistry; Medicine; Internal medicine; Antifungal; Mathematics","score_opus":0.08115679293382451,"score_gpt":0.3377808755296613,"score_spread":0.2566240825958368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165071617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97093785,0.00006874304,0.02852616,0.00008836605,0.000027296404,0.00016948431,0.000029124365,0.0000042102743,0.00014878406],"genre_scores_gemma":[0.99790996,0.000030676365,0.0018526497,0.00006093499,0.000014960766,0.0000012703886,0.000114192226,0.000005794147,0.000009576676],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985231,0.00014193605,0.00072035316,0.00016377565,0.00032265036,0.00012818923],"domain_scores_gemma":[0.9987145,0.00007186011,0.0005040443,0.00046998853,0.00018905892,0.0000505616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012421875,0.000095089985,0.00043547337,0.00022593772,0.00003812276,0.000009152784,0.00024361191,0.00005533754,0.00009978222],"category_scores_gemma":[0.00019707564,0.000060325317,0.00021164403,0.00059452665,0.00004811313,0.00034830716,0.00003422078,0.0001878802,2.5478403e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003800269,0.0004412664,0.037543133,0.000053049305,0.00047882498,0.000007042623,0.00035502773,0.0043486785,0.95190275,0.000028007078,0.000014319528,0.0010276275],"study_design_scores_gemma":[0.0009139821,0.0002686917,0.584775,0.00009564461,0.0016672031,0.000001457472,0.000065657994,0.37426892,0.037417196,0.0004771856,1.8366387e-7,0.000048939546],"about_ca_topic_score_codex":0.000031886462,"about_ca_topic_score_gemma":0.000037812395,"teacher_disagreement_score":0.9144856,"about_ca_system_score_codex":0.00003208712,"about_ca_system_score_gemma":0.0001232852,"threshold_uncertainty_score":0.24599952},"labels":[],"label_agreement":null},{"id":"W2166116405","doi":"10.1111/j.1365-2958.2006.05196.x","title":"<i>PDR16</i>‐mediated azole resistance in <i>Candida albicans</i>","year":2006,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Ste. Anne's Hospital; Institute for Research in Immunology and Cancer","funders":"Canadian Institutes of Health Research","keywords":"Azole; Biology; Candida albicans; Mutant; Gene; Corpus albicans; Microbiology; Systemic candidiasis; Genetics; Antifungal","score_opus":0.0034047038585662214,"score_gpt":0.21615514191460863,"score_spread":0.2127504380560424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166116405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97343594,0.0030801161,0.00046490837,0.0011401648,0.00008964451,0.0003348594,0.000047798007,0.00006315893,0.021343436],"genre_scores_gemma":[0.99362797,0.000034617784,0.0007485162,0.0023385626,0.000042483975,0.00001774547,0.00034711912,0.000024845624,0.0028181418],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99847,0.00010641571,0.00039150944,0.00047348623,0.000074441254,0.00048415698],"domain_scores_gemma":[0.99931246,0.000054643097,0.00007150961,0.00041952517,0.000071459704,0.000070424256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019781063,0.00019668599,0.00041879062,0.00011267657,0.000040635303,0.000008384195,0.00012221951,0.00021659264,0.00018241288],"category_scores_gemma":[0.00007614592,0.00018162216,0.00012216378,0.00033592051,0.0002281857,0.000028672994,0.000038946888,0.00027070122,0.00012115536],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029705776,0.00015958432,0.06947426,0.000044059016,0.000015009125,0.00045846813,0.000022500422,0.0000025981792,0.9233755,0.0007273395,0.0053736814,0.0000499669],"study_design_scores_gemma":[0.0061816717,0.0002803499,0.25852132,0.00022662902,0.00008841159,0.0001423754,0.00007675054,0.000011373293,0.2935084,0.0016153186,0.43861246,0.0007349243],"about_ca_topic_score_codex":0.0002475821,"about_ca_topic_score_gemma":0.0025789575,"teacher_disagreement_score":0.6298671,"about_ca_system_score_codex":0.0001184377,"about_ca_system_score_gemma":0.0001171461,"threshold_uncertainty_score":0.74063367},"labels":[],"label_agreement":null},{"id":"W2166117618","doi":"10.1128/mbio.00495-12","title":"The Evolutionary Rewiring of Ubiquitination Targets Has Reprogrammed the Regulation of Carbon Assimilation in the Pathogenic Yeast Candida albicans","year":2012,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":117,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Cancer Institute; Biotechnology and Biological Sciences Research Council; European Commission; National Institute of General Medical Sciences; Wellcome Trust","keywords":"Catabolite repression; Glyoxylate cycle; Candida albicans; Corpus albicans; Biology; Saccharomyces cerevisiae; Assimilation (phonology); Yeast; Biochemistry; Ubiquitin; Microbiology; Enzyme; Gene; Mutant","score_opus":0.028833902398188123,"score_gpt":0.274695849900092,"score_spread":0.24586194750190388,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166117618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940582,0.0012329231,0.00007183559,0.0019981628,0.00008159947,0.00045670345,0.00000533953,0.000008719257,0.0020865027],"genre_scores_gemma":[0.9995678,0.000032318003,0.00006504162,0.00003917479,0.00009470026,0.000022881215,0.000027923155,0.000005975062,0.0001441575],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989139,0.00017699535,0.00030112098,0.00010758367,0.0003313723,0.00016906639],"domain_scores_gemma":[0.99914694,0.00016707994,0.00017147652,0.00037550402,0.00011663776,0.000022337535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015106093,0.000065622626,0.00011681702,0.00003061097,0.00012400835,0.0000070960905,0.00008621387,0.000056135737,0.000011882147],"category_scores_gemma":[0.00039405093,0.000033700555,0.000064408865,0.0002341609,0.00018830462,0.00006037382,0.00001763796,0.00012101995,7.3718104e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003103416,0.0001901169,0.9225638,0.00007066916,0.000027247515,6.565267e-7,0.005086271,0.000019224099,0.05703546,0.0017256584,0.00034090038,0.0126296505],"study_design_scores_gemma":[0.00023647126,0.000051207626,0.9938556,0.00004653486,0.000035678542,0.0000031265183,0.0013341539,0.00072828896,0.00235033,0.00030385563,0.0010204635,0.000034276254],"about_ca_topic_score_codex":0.00032467692,"about_ca_topic_score_gemma":0.00068274076,"teacher_disagreement_score":0.07129181,"about_ca_system_score_codex":0.000087930064,"about_ca_system_score_gemma":0.00007715369,"threshold_uncertainty_score":0.13742687},"labels":[],"label_agreement":null},{"id":"W2166329800","doi":"10.2214/ajr.174.1.1740051","title":"Semiinvasive Pulmonary Aspergillosis in Chronic Obstructive Pulmonary Disease","year":2000,"lang":"en","type":"article","venue":"American Journal of Roentgenology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Hospital and Health Sciences Centre","funders":"","keywords":"Medicine; Aspergillosis; Parenchyma; Lung; COPD; Pathology; Autopsy; Radiology; Biopsy; Respiratory disease; Internal medicine","score_opus":0.008903391152943517,"score_gpt":0.2597100631587435,"score_spread":0.2508066720058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166329800","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99220467,0.003221715,0.000020936674,0.0016669391,0.0000863907,0.00014660202,0.000010093825,0.000011328931,0.0026313525],"genre_scores_gemma":[0.99597335,0.0024314069,0.00024065252,0.00047473828,0.00021565596,0.0000047303506,0.0000062504078,0.000021776179,0.0006314162],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99824214,0.00017133821,0.00059473113,0.00027985984,0.0002849715,0.00042696844],"domain_scores_gemma":[0.9988076,0.00009745056,0.00029795576,0.0003052229,0.0001555349,0.00033622058],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017671849,0.00018791646,0.0006715674,0.00023419163,0.000048444414,0.0000050486196,0.0001861461,0.00005621475,0.0011092338],"category_scores_gemma":[0.000109915585,0.00015808523,0.0002514337,0.0004290499,0.0006736861,0.00013599565,0.000026164464,0.0004839002,0.00004712649],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004196939,0.00040945935,0.7431347,0.00004868982,0.00013772996,0.006512652,0.00020710046,0.00018689469,0.0075611197,0.000036898793,0.00009085716,0.237477],"study_design_scores_gemma":[0.00054879306,0.0011839068,0.99294424,0.00012342868,0.0001317032,0.0012268112,0.0010116452,0.00009184546,0.0002998521,0.00040171097,0.0018991025,0.00013695646],"about_ca_topic_score_codex":0.00008803129,"about_ca_topic_score_gemma":0.000036794947,"teacher_disagreement_score":0.24980958,"about_ca_system_score_codex":0.0006048236,"about_ca_system_score_gemma":0.0006026502,"threshold_uncertainty_score":0.9998039},"labels":[],"label_agreement":null},{"id":"W2166734004","doi":"10.1086/588660","title":"Revised Definitions of Invasive Fungal Disease from the European Organization for Research and Treatment of Cancer/Invasive Fungal Infections Cooperative Group and the National Institute of Allergy and Infectious Diseases Mycoses Study Group (EORTC/MSG) Consensus Group","year":2008,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4909,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Janssen Pharmaceuticals; National Institute of Allergy and Infectious Diseases; European Organisation for Research and Treatment of Cancer; Medical Research Council; European Commission; University at Buffalo; National Institutes of Health; Basilea Pharmaceutica; Astellas Pharma; Italfarmaco; Wellcome Trust; University of Texas Health Science Center at San Antonio; GlaxoSmithKline; Centre Hospitalier Universitaire Vaudois; University of Aberdeen; University of Pennsylvania; Wayne State University; National Health and Medical Research Council; Children's Hospital of Philadelphia; Daiichi Sankyo Europe; Gilead Sciences; UCB Pharma; Valeant Pharmaceuticals International; Sanofi; Amgen; Medical School, University of Michigan; Pfizer","keywords":"Medicine; Disease; Epidemiology; Cancer; Intensive care medicine; Family medicine; Pathology; Internal medicine","score_opus":0.13029041313116183,"score_gpt":0.3840048981316957,"score_spread":0.25371448500053384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166734004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98954076,0.005192411,0.00007197857,0.00024986238,0.0001356973,0.0025932048,0.0020208617,0.00004921739,0.0001460196],"genre_scores_gemma":[0.97436374,0.02462745,0.000009065961,0.00013446671,0.00027839918,0.00020805068,0.00032982015,0.000034639754,0.000014343258],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996548,0.0012620962,0.00093694334,0.00058652187,0.000435454,0.00023100726],"domain_scores_gemma":[0.98879576,0.0086153075,0.00041305163,0.00035285423,0.0014821561,0.0003408501],"candidate_categories":["metaresearch","sts"],"consensus_categories":[],"category_scores_codex":[0.00057247764,0.00028173786,0.00079716736,0.00012827682,0.00093297515,0.00003923506,0.00009330122,0.000078897916,0.00002790334],"category_scores_gemma":[0.009935293,0.00018100506,0.00021448282,0.00051485497,0.004464814,0.0001480823,0.00013742242,0.00019946985,8.2274886e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017125603,0.006626449,0.9842986,0.0001562611,0.0012282961,0.000026363505,0.00060555455,0.000024875944,0.000108380475,0.004325422,0.00023837676,0.0006488926],"study_design_scores_gemma":[0.010068242,0.00400543,0.98146373,0.00023111922,0.0010783608,0.000011563881,0.00069938874,0.000026889069,0.000023188271,0.0021658146,0.00006936216,0.00015688315],"about_ca_topic_score_codex":0.0009000862,"about_ca_topic_score_gemma":0.0058108633,"teacher_disagreement_score":0.019435039,"about_ca_system_score_codex":0.00010646839,"about_ca_system_score_gemma":0.000577769,"threshold_uncertainty_score":0.99840444},"labels":[],"label_agreement":null},{"id":"W2167123339","doi":"10.6000/1927-5951.2014.04.04.1","title":"Amphotericin B-Deoxycholate is as Effective and Safe as the Costly Amphotericin B Colloidal Dispersion in the Treatment of Paediatric Invasive Fungal Infections","year":2014,"lang":"en","type":"article","venue":"Journal of Pharmacy and Nutrition Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Universiti Kebangsaan Malaysia","keywords":"Amphotericin B; Adverse effect; Medicine; Amphotericin B deoxycholate; Internal medicine; Antifungal; Dermatology","score_opus":0.021658261727814376,"score_gpt":0.3424047219128879,"score_spread":0.3207464601850735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167123339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934934,0.002617964,0.000025291729,0.0030315027,0.000101267586,0.00044927243,0.000006015122,0.0000020581606,0.0002732733],"genre_scores_gemma":[0.98546576,0.013508852,0.00003555568,0.00082295353,0.000133475,0.000009298841,5.216985e-7,0.0000025224024,0.000021051943],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987791,0.00029336617,0.00031065813,0.0001464978,0.00034349863,0.0001268469],"domain_scores_gemma":[0.99865127,0.00084674184,0.00022693798,0.00007341997,0.0001266447,0.000075014366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011336622,0.00010227565,0.0002513613,0.00016388662,0.00026744217,0.00004758315,0.00008210902,0.000027613542,0.00003137143],"category_scores_gemma":[0.00019133966,0.000049644066,0.000099195255,0.000490899,0.00040901988,0.00023659042,0.000011140856,0.00014424295,0.0000020247628],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004048002,0.00249948,0.8397587,0.00021564719,0.00007729451,0.000048252372,0.012239512,0.000007186567,0.11679433,0.00010499208,0.00061185285,0.02359473],"study_design_scores_gemma":[0.012622377,0.017705645,0.88586235,0.0003967174,0.00039727753,0.0009457323,0.009161881,0.00032011795,0.061607964,0.0014912953,0.009307397,0.00018126487],"about_ca_topic_score_codex":0.00016414578,"about_ca_topic_score_gemma":0.000042500073,"teacher_disagreement_score":0.055186372,"about_ca_system_score_codex":0.00005275681,"about_ca_system_score_gemma":0.000085794025,"threshold_uncertainty_score":0.20569761},"labels":[],"label_agreement":null},{"id":"W2167269636","doi":"10.1128/ec.00316-06","title":"In Vivo and In Vitro Anaerobic Mating in <i>Candida albicans</i>","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Biotechnology Research Institute","funders":"Canadian Institutes of Health Research; National Science Foundation","keywords":"Biology; Candida albicans; Farnesol; Mating; Microbiology; Mating type; Auxotrophy; Genetics; Biochemistry; Gene; Mutant","score_opus":0.008327353808501319,"score_gpt":0.25260329699103234,"score_spread":0.244275943182531,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167269636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9864245,0.00046979115,0.000053589574,0.00021492345,0.00005816799,0.00026138578,0.0000019809247,0.000011626061,0.012504004],"genre_scores_gemma":[0.996901,0.000055093056,0.00089773873,0.0006206659,0.00003935962,0.0000030137253,0.0000031513246,0.000012761234,0.0014672418],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987546,0.00003527509,0.0003916906,0.0002848314,0.00015726547,0.00037631023],"domain_scores_gemma":[0.9995006,0.00015271391,0.000042844375,0.00019207502,0.00001367213,0.00009812662],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007547053,0.00012308732,0.00030528186,0.00019764432,0.000017475659,0.0000080175105,0.000051295956,0.00008239663,0.0001828939],"category_scores_gemma":[0.00007976259,0.000117108284,0.000031198677,0.00039684912,0.00006213367,0.00007844055,0.000029797402,0.000288077,0.000011497511],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049458694,0.00019989202,0.91569775,0.00015891307,0.000001707516,0.00051354774,0.00056058285,0.0000050523013,0.08132753,0.000011182866,0.00014200206,0.0008872407],"study_design_scores_gemma":[0.0018803945,0.00005767375,0.96160823,0.00013505155,0.000006456255,0.000008450113,0.00071862875,0.00019586597,0.035062656,0.00008080587,0.00012820255,0.0001175772],"about_ca_topic_score_codex":0.00092884165,"about_ca_topic_score_gemma":0.0061935866,"teacher_disagreement_score":0.046264872,"about_ca_system_score_codex":0.00015824364,"about_ca_system_score_gemma":0.000060789942,"threshold_uncertainty_score":0.47755373},"labels":[],"label_agreement":null},{"id":"W2167460646","doi":"10.1128/ec.00327-07","title":"Genome-Wide Expression and Location Analyses of the <i>Candida albicans</i> Tac1p Regulon","year":2007,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; Université de Montréal; Institute for Research in Immunology and Cancer","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Promoter; Regulon; Genetics; Gene; Chromatin immunoprecipitation; Candida albicans; ATP-binding cassette transporter; Regulation of gene expression; Gene expression","score_opus":0.01841231944641943,"score_gpt":0.28347786329628466,"score_spread":0.26506554384986525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167460646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98814,0.0013656573,0.0020865018,0.00018179162,0.00006342947,0.0002320778,0.0000020053083,0.000014112377,0.007914432],"genre_scores_gemma":[0.99601394,0.000085980435,0.00030016273,0.00024747854,0.00005432488,0.0000012581559,0.000008116486,0.000009745351,0.003278986],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990567,0.0000359469,0.00027115343,0.00020735839,0.00025820205,0.00017066856],"domain_scores_gemma":[0.99912757,0.00013916018,0.00011248503,0.00041014858,0.0001208506,0.00008979548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035325074,0.00009995732,0.00020261655,0.00004415966,0.00007286509,0.0000058015,0.00007782549,0.000061233004,0.00010365027],"category_scores_gemma":[0.00015458753,0.00006323141,0.00006247763,0.00030082435,0.00015121965,0.000042639906,0.000043296895,0.00011735952,0.0000058033424],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016093165,0.00009725985,0.7494718,0.00018423077,0.0000092991095,0.0000051844963,0.00019919196,0.000008930349,0.24913119,0.000006080475,0.00034051965,0.00038537206],"study_design_scores_gemma":[0.0003774935,0.000062315085,0.8086778,0.000084249805,0.00006416703,0.000002475076,0.00023590362,0.000016752589,0.19014788,0.00003724684,0.00024197181,0.00005174524],"about_ca_topic_score_codex":0.000090856534,"about_ca_topic_score_gemma":0.000086496875,"teacher_disagreement_score":0.059205994,"about_ca_system_score_codex":0.0000438898,"about_ca_system_score_gemma":0.00008195804,"threshold_uncertainty_score":0.2578502},"labels":[],"label_agreement":null},{"id":"W2167525762","doi":"10.1128/ec.00055-10","title":"Role of Aspergillus fumigatus DvrA in Host Cell Interactions and Virulence","year":2010,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Virulence; Aspergillus fumigatus; Microbiology; Candida albicans; Mutant; Virulence factor; Proinflammatory cytokine; Tumor necrosis factor alpha; Fungal protein; Transcription factor; Cell biology; Gene; Immunology; Inflammation; Genetics","score_opus":0.005516631714606671,"score_gpt":0.23847538690154532,"score_spread":0.23295875518693865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167525762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9619314,0.00044454748,0.00001649975,0.0001022949,0.00015790948,0.00017484967,0.0000073236415,0.000015830436,0.03714935],"genre_scores_gemma":[0.9967286,0.00009720285,0.00066445215,0.00007931307,0.000052149604,0.000003438817,0.0000050073295,0.000011538823,0.002358325],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991482,0.000021099053,0.00025046483,0.00024210206,0.0001468583,0.00019129537],"domain_scores_gemma":[0.99933714,0.000106455926,0.00006204126,0.0003197729,0.000055553755,0.00011901978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014972885,0.00011030075,0.00023373969,0.00008077024,0.000033128923,0.000007746398,0.000069123336,0.000072701805,0.0004970496],"category_scores_gemma":[0.000078310564,0.00009827402,0.000056580146,0.00014571902,0.00013624685,0.00008103441,0.00004426617,0.00041626763,0.000057168334],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008449807,0.00027788623,0.50413,0.00010254844,0.000003022234,0.000013971408,0.00032124546,6.77497e-7,0.49419683,0.000059936672,0.00006862764,0.00074076053],"study_design_scores_gemma":[0.00059284596,0.00010127161,0.8900982,0.000050664778,0.000025375413,0.000009204048,0.00060016976,0.00020365104,0.107582524,0.00008708581,0.0005621811,0.00008682561],"about_ca_topic_score_codex":0.00022102824,"about_ca_topic_score_gemma":0.0008948566,"teacher_disagreement_score":0.38661432,"about_ca_system_score_codex":0.00002346738,"about_ca_system_score_gemma":0.000076544835,"threshold_uncertainty_score":0.54423445},"labels":[],"label_agreement":null},{"id":"W2168608639","doi":"10.1371/journal.pgen.1000549","title":"Genomic Analysis of the Basal Lineage Fungus Rhizopus oryzae Reveals a Whole-Genome Duplication","year":2009,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":391,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Human Genome Research Institute; Centers for Disease Control and Prevention; Hokkaido University; University of California, Davis; Joint Genome Institute; National Institute of Allergy and Infectious Diseases; Broad Institute","keywords":"Biology; Gene duplication; Genetics; Gene; Genome; Aspergillus oryzae; Gene family; Biochemistry","score_opus":0.02259244081386962,"score_gpt":0.27177301797190934,"score_spread":0.2491805771580397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168608639","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99624956,0.0014560273,0.00020363185,0.0008099421,0.000030326684,0.00039396042,0.00008195249,0.00002283753,0.0007517408],"genre_scores_gemma":[0.99723166,0.00015542633,0.0005503251,0.0007436767,0.00010855176,0.0000051891843,0.00006696352,0.000012775651,0.0011254103],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986813,0.000057438036,0.0004337837,0.0002906335,0.00032631887,0.00021052029],"domain_scores_gemma":[0.998533,0.000047722162,0.00017654714,0.0009495083,0.00019669128,0.00009651014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020311492,0.00013568759,0.00041670553,0.00011700932,0.00006707554,0.000010620459,0.00020372376,0.000101842576,0.00009011401],"category_scores_gemma":[0.00012896575,0.00009905226,0.00027363273,0.00075292797,0.00008549578,0.00001737182,0.00003591204,0.00014762714,0.000027199281],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008840126,0.00022439126,0.2194368,0.00003878645,0.0003084812,0.0000020691991,0.00019229752,0.00014441814,0.77894783,0.000038125025,0.000101785685,0.00047662776],"study_design_scores_gemma":[0.000292157,0.00016682727,0.9592973,0.0000237914,0.0018801998,8.585939e-7,0.000047513713,0.0028863326,0.03468376,0.000111347435,0.00050910667,0.00010078596],"about_ca_topic_score_codex":0.000003360179,"about_ca_topic_score_gemma":0.000029450586,"teacher_disagreement_score":0.74426407,"about_ca_system_score_codex":0.00007579057,"about_ca_system_score_gemma":0.00009160867,"threshold_uncertainty_score":0.4039234},"labels":[],"label_agreement":null},{"id":"W2168652436","doi":"10.1111/j.1399-3046.2008.01056.x","title":"Invasive mold infections in iatrogenically immunocompromised children: An eight‐yr review","year":2008,"lang":"en","type":"article","venue":"Pediatric Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"","keywords":"Medicine; Incidence (geometry); Internal medicine; Retrospective cohort study; Cancer; Aspergillosis; Transplantation; Leukemia; Pediatrics; Surgery; Immunology","score_opus":0.017839252968045137,"score_gpt":0.2732966118977899,"score_spread":0.2554573589297448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168652436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990801,0.0072254073,0.00033912723,0.00019148995,0.000056696637,0.0008926119,0.000037391892,0.00006949212,0.00038680792],"genre_scores_gemma":[0.78248775,0.2161396,0.00036739968,0.00035786646,0.00015027676,0.000045063054,0.00040245126,0.000013322218,0.000036260415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986075,0.00010103207,0.0004776568,0.00032913915,0.00026111578,0.00022353583],"domain_scores_gemma":[0.999335,0.00009300899,0.000090248635,0.0002666384,0.00009146942,0.00012364755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020763457,0.00015818496,0.00032504756,0.00016077317,0.00011147132,0.0000057995585,0.000077920864,0.00010079623,0.00012558073],"category_scores_gemma":[0.00006884163,0.00014553592,0.00015389294,0.00055396545,0.00004396285,0.00022226124,0.0000042743222,0.00026191774,0.000059634767],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020783982,0.00040674658,0.9970675,0.0009820875,0.00001597088,0.00007630424,0.00022273813,0.0000066844673,0.0006351986,0.00002003634,0.00015224867,0.00020661682],"study_design_scores_gemma":[0.0019298889,0.00025142365,0.996447,0.0001663408,0.0003818274,0.0003152855,0.0000045654406,0.00000815259,0.00030103946,0.000028901077,0.000016300542,0.00014922697],"about_ca_topic_score_codex":0.00015961948,"about_ca_topic_score_gemma":0.00031653908,"teacher_disagreement_score":0.20891419,"about_ca_system_score_codex":0.00005967564,"about_ca_system_score_gemma":0.00028312026,"threshold_uncertainty_score":0.59347826},"labels":[],"label_agreement":null},{"id":"W2168666560","doi":"10.1128/aac.00637-11","title":"Concentration of Antifungal Agents within Host Cell Membranes: a New Paradigm Governing the Efficacy of Prophylaxis","year":2011,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Christie (Canada); Hôpital Maisonneuve-Rosemont; McGill University","funders":"Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie – Hans-Knöll-Institut; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Posaconazole; Itraconazole; Extracellular; Intracellular; Drug; Biology; Microbiology; Pharmacology; Antifungal; Antifungal drug; Cell; Immunology; Biochemistry","score_opus":0.02799945526069135,"score_gpt":0.2567777673120063,"score_spread":0.22877831205131494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168666560","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99780875,0.000115796895,0.00016674778,0.00025003921,0.00009772132,0.0005104391,0.000017885584,0.000013997191,0.0010185929],"genre_scores_gemma":[0.99720234,0.00078206364,0.00032746876,0.0009522304,0.00006079406,0.0000011029188,0.000012954249,0.00002024529,0.0006407763],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988684,0.000042188236,0.00041927534,0.00026457067,0.00020998482,0.00019557444],"domain_scores_gemma":[0.99923724,0.000035453755,0.00028858485,0.00029119704,0.00006136626,0.000086138636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017655097,0.00017253356,0.00036370222,0.000023457209,0.00007748097,0.000012328762,0.00012361153,0.00009930895,0.0002803769],"category_scores_gemma":[0.000025417452,0.00011516739,0.0001323889,0.00014726217,0.00024077408,0.000079194244,0.000020412914,0.00013546881,0.0000056427234],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029959981,0.0010741102,0.5570958,0.0007095135,0.00021727436,0.000013383352,0.012391698,0.0000021410667,0.4181161,0.00014491726,0.0046085273,0.0026305167],"study_design_scores_gemma":[0.0032907908,0.00045116319,0.59936213,0.00018432827,0.0000804116,0.0000070930073,0.0002341839,0.000049168862,0.39504883,0.000023879287,0.0011348199,0.00013318312],"about_ca_topic_score_codex":0.00035246275,"about_ca_topic_score_gemma":0.000014849591,"teacher_disagreement_score":0.04226632,"about_ca_system_score_codex":0.00001595533,"about_ca_system_score_gemma":0.00012643762,"threshold_uncertainty_score":0.469639},"labels":[],"label_agreement":null},{"id":"W2168956077","doi":"10.1093/jac/dkl022","title":"Progressive loss of echinocandin activity following prolonged use for treatment of Candida albicans oesophagitis","year":2006,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":192,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"Astellas Pharma; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Echinocandin; Micafungin; Anidulafungin; Caspofungin; Candida albicans; Biology; Microbiology; Candida glabrata; Daptomycin; Candida dubliniensis; Multilocus sequence typing; Corpus albicans; Medicine; Antifungal; Genotype; Staphylococcus aureus; Amphotericin B; Gene; Fluconazole; Genetics","score_opus":0.01649117425673411,"score_gpt":0.29419257094738305,"score_spread":0.2777013966906489,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168956077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976809,0.00031343498,0.00053188467,0.0005954969,0.00012073393,0.0006488048,0.00006659691,0.000006990558,0.000035128298],"genre_scores_gemma":[0.9959442,0.00016231633,0.0033727284,0.000058821908,0.00017756806,0.0000031351933,0.0000079352985,0.00002686807,0.000246427],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987418,0.000030369834,0.0005928315,0.00016802871,0.00023627566,0.0002307109],"domain_scores_gemma":[0.9985538,0.00011429957,0.00075176865,0.00019341965,0.0003139585,0.00007271266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019579212,0.00018898526,0.0008833905,0.00011988841,0.000050987754,0.000014487864,0.000082217375,0.00011226784,0.000029753766],"category_scores_gemma":[0.000045567373,0.00013799629,0.00068869756,0.00014230135,0.00014749046,0.00016354927,0.000005078316,0.000080439226,1.8320274e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0074844016,0.0016952357,0.33283195,0.00015013826,0.00043861862,0.00011933748,0.00028808322,0.000005553175,0.6532056,0.000008562767,0.0005737948,0.0031987403],"study_design_scores_gemma":[0.008465501,0.0025772532,0.2055294,0.00029524232,0.0002387733,0.00011035637,0.000027842818,0.000012711261,0.7820749,0.00004089109,0.00051546766,0.000111607565],"about_ca_topic_score_codex":0.00028786805,"about_ca_topic_score_gemma":0.00010154083,"teacher_disagreement_score":0.12886937,"about_ca_system_score_codex":0.00017602881,"about_ca_system_score_gemma":0.00033667588,"threshold_uncertainty_score":0.5627326},"labels":[],"label_agreement":null},{"id":"W2169065587","doi":"10.1139/cjm-2014-0526","title":"A role of <i>Candida</i> <i>albicans</i> CDC4 in the negative regulation of biofilm formation","year":2014,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biofilm; Candida albicans; Mutant; Microbiology; Biology; Auxotrophy; Corpus albicans; Plasmid; Strain (injury); Gene; Molecular biology; Bacteria; Biochemistry; Genetics","score_opus":0.007363648987591436,"score_gpt":0.21685880195147403,"score_spread":0.2094951529638826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169065587","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970617,0.0003497272,0.00011686618,0.00073359295,0.000045585468,0.00011507704,0.000024968253,6.579052e-7,0.0015518025],"genre_scores_gemma":[0.99932176,0.000015218168,0.00020190942,0.00037987644,0.000039600724,5.6862655e-7,0.0000109578605,0.0000034434856,0.000026693857],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99920255,0.000120975135,0.0004347932,0.00005859865,0.000043715547,0.00013939121],"domain_scores_gemma":[0.9991384,0.00011595301,0.00032612946,0.00013025728,0.00021182084,0.0000774283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006434526,0.000060276187,0.00027015118,0.00017027119,0.000024911404,0.0000024665826,0.00010750662,0.00008287025,0.000061540064],"category_scores_gemma":[0.00024504078,0.000040454805,0.000080248305,0.00016080077,0.00020456206,0.000058108864,0.0000030991337,0.00015078773,0.0000014924307],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020045727,0.000024566883,0.053325646,0.000048119724,0.00002018573,0.000003370887,0.0021562125,0.00001082885,0.939769,0.00069188286,0.001316609,0.002433074],"study_design_scores_gemma":[0.0030437992,0.0017620607,0.6749703,0.00050831004,0.00012926661,0.00067501405,0.0054186746,0.000095313175,0.2821598,0.0033731959,0.027700631,0.00016360843],"about_ca_topic_score_codex":0.001845663,"about_ca_topic_score_gemma":0.039600473,"teacher_disagreement_score":0.6576092,"about_ca_system_score_codex":0.00006905319,"about_ca_system_score_gemma":0.0004380636,"threshold_uncertainty_score":0.9779243},"labels":[],"label_agreement":null},{"id":"W2169134372","doi":"10.1111/myc.12193","title":"Multilocus sequence typing of <i>Candida africana</i> from patients with vulvovaginal candidiasis in New Delhi, India","year":2014,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Multilocus sequence typing; Biology; Genotype; Molecular epidemiology; Germ tube; Vulvovaginal Candidiasis; Microbiology; Polymerase chain reaction; Typing; Antifungal; DNA sequencing; Gene; Genetics; Candida albicans","score_opus":0.012208407035780643,"score_gpt":0.24341264677558355,"score_spread":0.23120423973980292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169134372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99800795,0.00021235202,0.0002144061,0.000075246935,0.000048156802,0.00020185964,0.00003150171,0.000019207708,0.0011892928],"genre_scores_gemma":[0.99812025,0.000024191135,0.0013945393,0.00022952438,0.000048342547,0.0000038880553,0.000037351605,0.000013928309,0.00012800223],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99896884,0.000033717002,0.00024492986,0.00027081853,0.0002477322,0.00023399081],"domain_scores_gemma":[0.9992343,0.00014179373,0.00009954145,0.00029581136,0.00008783297,0.00014070883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011313357,0.00013572404,0.00034787017,0.00008209154,0.000030504892,0.000010029826,0.00009264943,0.000059122496,0.000098348486],"category_scores_gemma":[0.00023744529,0.000103725906,0.000037478825,0.0002452705,0.00008837528,0.00010325454,0.00002293165,0.00014261919,0.000011825053],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051779806,0.000107630316,0.98415226,0.000038608272,0.000022861492,0.000007977275,0.00044135677,0.0000038235526,0.0019251906,0.000032761247,0.00024144944,0.012508263],"study_design_scores_gemma":[0.0018526017,0.00028645503,0.99295473,0.0002963357,0.00004549957,5.863906e-7,0.00017357979,0.00004373683,0.0033306612,0.000121073084,0.0007731777,0.00012153509],"about_ca_topic_score_codex":0.011143647,"about_ca_topic_score_gemma":0.0054818313,"teacher_disagreement_score":0.012386727,"about_ca_system_score_codex":0.000092536975,"about_ca_system_score_gemma":0.00027070186,"threshold_uncertainty_score":0.99544126},"labels":[],"label_agreement":null},{"id":"W2169288908","doi":"10.1007/978-3-7091-0870-3_5","title":"Designing a Candida albicans Conjugate Vaccine by Reverse Engineering Protective Monoclonal Antibodies","year":2011,"lang":"en","type":"book-chapter","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; University of Alberta","funders":"","keywords":"Monoclonal antibody; Conjugate; Candida albicans; Virology; Antibody; Microbiology; Biology; Immunology; Mathematics","score_opus":0.019606017414728342,"score_gpt":0.23351432473432615,"score_spread":0.2139083073195978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169288908","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0048746397,0.003551012,0.024840241,0.00043109193,0.0003071471,0.0035489893,0.00028031552,0.00054894976,0.9616176],"genre_scores_gemma":[0.09396192,0.0007017919,0.004363776,0.00042017887,0.00023717656,0.000047500544,0.00013155976,0.00015833508,0.89997774],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99812686,0.000012894303,0.00047075056,0.00065220165,0.0003300188,0.00040725715],"domain_scores_gemma":[0.99880445,0.0000765662,0.00017269923,0.00046817493,0.00023142611,0.00024667615],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023069986,0.00053871796,0.0009190784,0.0001409651,0.00009224676,0.000017464765,0.00011835102,0.00040265505,0.0031872985],"category_scores_gemma":[0.00010889808,0.00045049915,0.0002640658,0.00003543124,0.00008140883,0.000090466514,0.000065511886,0.0007484369,0.00013702492],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.018582901,0.001005545,0.039879754,0.010799133,0.0131605,0.005033969,0.0061307456,0.000028641856,0.38110545,0.12446538,0.37660217,0.023205806],"study_design_scores_gemma":[0.012655202,0.005705211,0.017304992,0.013696793,0.0048807207,0.0005490352,0.0007149799,0.00062346144,0.09155813,0.012429406,0.8320734,0.0078086634],"about_ca_topic_score_codex":0.0005299541,"about_ca_topic_score_gemma":0.00020681928,"teacher_disagreement_score":0.45547125,"about_ca_system_score_codex":0.00021298326,"about_ca_system_score_gemma":0.00021904001,"threshold_uncertainty_score":0.99979466},"labels":[],"label_agreement":null},{"id":"W2169494061","doi":"10.1128/ec.05030-11","title":"Modulation of Morphogenesis in Candida albicans by Various Small Molecules","year":2011,"lang":"en","type":"review","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":140,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Candida albicans; Biology; Morphogenesis; Microbiology; Hypha; Corpus albicans; Yeast; Fungal protein; Cell biology; Farnesol; Saccharomyces cerevisiae; Genetics; Gene; Biochemistry","score_opus":0.03925684452116513,"score_gpt":0.28240168296921386,"score_spread":0.24314483844804874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169494061","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027888918,0.9899139,0.00042747203,0.000008478699,0.00009451525,0.0008859107,0.000086425585,0.000021587452,0.0057728267],"genre_scores_gemma":[0.010577875,0.98393744,0.00044107967,0.000028353437,0.000039367205,0.000028287317,0.0003186264,0.00005913167,0.004569855],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99803543,0.00013140505,0.0008206547,0.00049708225,0.00020803305,0.00030741916],"domain_scores_gemma":[0.9987328,0.000108912325,0.0003284013,0.0006279838,0.0000679129,0.00013397785],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025028712,0.00036384515,0.0017127711,0.00018877132,0.000022195698,0.00000556568,0.00018012826,0.00033647762,0.000437124],"category_scores_gemma":[0.00006257288,0.00030294788,0.00041707806,0.00034422483,0.000090198126,0.000023396757,0.00004806328,0.00030272623,0.00005590665],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016059373,0.001974435,0.04809061,0.08990065,0.00032609087,0.00023497855,0.00044440164,0.000010840557,0.00021454174,0.00011253774,0.0031103683,0.85541993],"study_design_scores_gemma":[0.0037230044,0.0015420356,0.14549324,0.03649972,0.007164594,0.000104159655,0.00016802433,0.00046263632,0.0002915557,0.00023178941,0.8018263,0.002492956],"about_ca_topic_score_codex":0.0017765906,"about_ca_topic_score_gemma":0.0004996639,"teacher_disagreement_score":0.85292697,"about_ca_system_score_codex":0.00019701643,"about_ca_system_score_gemma":0.00046300073,"threshold_uncertainty_score":0.99994224},"labels":[],"label_agreement":null},{"id":"W2169748580","doi":"10.3201/eid1507.090043","title":"Frequency and Evolution of Azole Resistance in<i>Aspergillus fumigatus</i>Associated with Treatment Failure1","year":2009,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":749,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"University of Manchester; University of Warwick","keywords":"Posaconazole; Itraconazole; Aspergillus fumigatus; Voriconazole; Azole; Microbiology; Aspergillosis; Drug resistance; Biology; Population; Aspergillus; Medicine; Antifungal; Immunology","score_opus":0.005796453545541764,"score_gpt":0.23932627062465484,"score_spread":0.23352981707911308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169748580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99151915,0.0048709097,0.00007453376,0.00023473533,0.000029141811,0.00029353332,0.00002630692,0.000096051204,0.0028556627],"genre_scores_gemma":[0.9992853,0.00023432553,0.00004927693,0.00005802194,0.000029359475,0.000012767123,0.00002652999,0.000011580963,0.0002928417],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989582,0.00005027178,0.0002536264,0.00029180077,0.00020357363,0.00024253124],"domain_scores_gemma":[0.9993759,0.00005184929,0.000104823695,0.00022786464,0.00011522796,0.00012434216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007053455,0.00017321734,0.0003532641,0.00012697994,0.000089282374,0.0000092569735,0.000030050553,0.000060304796,0.00002793089],"category_scores_gemma":[0.00018727712,0.0001373827,0.00007438096,0.00039180563,0.00011697098,0.00011518234,0.000006146071,0.00008304389,0.0000015437269],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023439387,0.0006844645,0.99534553,0.00005397989,0.00005684152,0.000041154435,0.00020598728,0.000017010563,0.0015918155,0.000947159,0.00006300384,0.0007586439],"study_design_scores_gemma":[0.001959975,0.0006890115,0.9946967,0.00035277553,0.00014777134,0.00000342316,0.00011822679,0.0000237709,0.00025545995,0.0015532576,0.00006431515,0.00013534927],"about_ca_topic_score_codex":0.000257018,"about_ca_topic_score_gemma":0.003043952,"teacher_disagreement_score":0.007766171,"about_ca_system_score_codex":0.0004623979,"about_ca_system_score_gemma":0.00016808216,"threshold_uncertainty_score":0.5602304},"labels":[],"label_agreement":null},{"id":"W2169753995","doi":"10.1128/jcm.38.1.375-381.2000","title":"Pulmonary Infection Caused by <i>Gymnascella hyalinospora</i> in a Patient with Acute Myelogenous Leukemia","year":2000,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Leukemia; Biology; Itraconazole; Fluconazole; Pathology; Biopsy; Amphotericin B; Pancytopenia; Medicine; Microbiology; Immunology; Antifungal; Bone marrow","score_opus":0.016075749142220045,"score_gpt":0.3093610489270375,"score_spread":0.29328529978481743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169753995","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973785,0.0005149983,0.000029495292,0.00041623338,0.00019404973,0.00019566216,0.000017748034,0.000009809238,0.001243464],"genre_scores_gemma":[0.99572146,0.0017617897,0.00022800299,0.001468423,0.00015958885,0.0000013897297,0.000025092386,0.00001502716,0.00061919837],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99760115,0.00026532292,0.0014983369,0.00025972855,0.000087799446,0.00028766357],"domain_scores_gemma":[0.99868995,0.00025381814,0.00048474377,0.00021532911,0.00018126027,0.00017489518],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000788287,0.00016492039,0.000898376,0.000072547715,0.000035735215,0.000005986885,0.00008857111,0.00033993745,0.00035616715],"category_scores_gemma":[0.00012263712,0.0001091311,0.0002671278,0.00016811119,0.0002531303,0.000057463418,0.000014455148,0.0008732039,0.00004193896],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015019278,0.0017922067,0.722247,0.000051215324,0.00039074017,0.0052155564,0.00013681242,0.000031576845,0.17427745,0.0000026600067,0.007227804,0.0736077],"study_design_scores_gemma":[0.01331411,0.023182113,0.7430732,0.0006693283,0.0007515747,0.021437295,0.00012961762,0.000041099534,0.011898934,0.00016684199,0.1846963,0.00063958135],"about_ca_topic_score_codex":0.00007267993,"about_ca_topic_score_gemma":0.0001005506,"teacher_disagreement_score":0.1774685,"about_ca_system_score_codex":0.00014700886,"about_ca_system_score_gemma":0.0005008068,"threshold_uncertainty_score":0.4450237},"labels":[],"label_agreement":null},{"id":"W2169916145","doi":"10.1128/aac.45.7.2018-2022.2001","title":"Influence of Human Serum on Antifungal Pharmacodynamics with <i>Candida albicans</i>","year":2001,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Health Sciences Centre","funders":"Medical Research Council; Canadian Blood Services; Manitoba Medical Service Foundation","keywords":"Ketoconazole; Fluconazole; Itraconazole; Flucytosine; Amphotericin B; Candida albicans; Microbiology; Pharmacodynamics; Corpus albicans; Biology; Pharmacokinetics; Pharmacology; Antifungal","score_opus":0.010068886770891626,"score_gpt":0.2797569626302972,"score_spread":0.2696880758594056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169916145","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99681044,0.00001176264,0.000024648243,0.0010202071,0.000019901894,0.000270002,0.000025642019,0.000030144349,0.0017872327],"genre_scores_gemma":[0.98893386,0.0008933595,0.000077259225,0.008761305,0.000053088002,0.0000018545267,0.000016153685,0.000027123564,0.0012360177],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989725,0.000018122884,0.00023953311,0.0003179362,0.0001940412,0.00025791058],"domain_scores_gemma":[0.9994423,0.000015026619,0.000100768295,0.00024408688,0.00008932042,0.00010851373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008978539,0.0001972407,0.0003467339,0.000056887304,0.000113587135,0.00001597145,0.00008559526,0.000074162635,0.00021553243],"category_scores_gemma":[0.0000038172648,0.00014722205,0.00006936068,0.00017378337,0.00022911906,0.00007857506,0.000014795623,0.00015655244,0.0000047151357],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001427654,0.0004473476,0.7941729,0.00011204757,0.000109482135,0.0000557608,0.00017694532,0.000027498312,0.19898398,0.000058589387,0.0021816343,0.0022461999],"study_design_scores_gemma":[0.0037705153,0.0007723302,0.9451259,0.00028103334,0.000062835825,0.000049034345,0.00004193179,0.000047099737,0.043567736,0.000016473852,0.006052409,0.00021275015],"about_ca_topic_score_codex":0.00009148574,"about_ca_topic_score_gemma":0.000040900843,"teacher_disagreement_score":0.15541625,"about_ca_system_score_codex":0.000024077517,"about_ca_system_score_gemma":0.000045262917,"threshold_uncertainty_score":0.6003541},"labels":[],"label_agreement":null},{"id":"W2170566980","doi":"10.51847/dsupclw","title":"10.51847/DsUPclw","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Council of Scientific and Industrial Research, India","keywords":"Protease; Candida albicans; Microbiology; Secretion; Candida tropicalis; Protease inhibitor (pharmacology); Biology; Enzyme; Chemistry; Biochemistry; Virology; Virus","score_opus":0.00851312421447269,"score_gpt":0.2185852886039045,"score_spread":0.2100721643894318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170566980","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04800034,0.00007612301,7.541524e-7,0.0005199583,0.0000013590587,0.00017996179,0.0000072713424,0.00008748358,0.95112675],"genre_scores_gemma":[0.02369114,7.700628e-7,0.00011620698,0.00024715185,0.000103228704,0.0000060491384,0.00001421501,0.00001347931,0.9758078],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992686,0.000016105054,0.00013434797,0.0001994432,0.00017638286,0.0002051179],"domain_scores_gemma":[0.99941784,0.00002592071,0.000010375437,0.00032502253,0.000044306184,0.0001765587],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001102872,0.00009021557,0.0001784732,0.000031395655,0.000048509854,0.000009998306,0.00006635847,0.000051367508,0.99598265],"category_scores_gemma":[0.000059243026,0.00007685285,0.00006928854,0.00013869598,0.0000368252,0.000039537324,0.000012200066,0.00008469377,0.98304516],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056663103,0.00010008675,0.000050641,0.000019690422,0.000016804343,0.000027255348,0.00001808337,0.0000020143818,0.00065192895,0.0000014074559,0.06387995,0.9346655],"study_design_scores_gemma":[0.00029631323,0.00022170723,0.0067703924,0.000029085391,0.00002368023,0.0000075200774,0.000001615211,0.000029748262,0.000091194124,0.000002242466,0.99244124,0.00008528314],"about_ca_topic_score_codex":0.000012686866,"about_ca_topic_score_gemma":2.9798164e-7,"teacher_disagreement_score":0.9345802,"about_ca_system_score_codex":0.000035434423,"about_ca_system_score_gemma":0.000042503936,"threshold_uncertainty_score":0.3133968},"labels":[],"label_agreement":null},{"id":"W2170688673","doi":"10.1128/aac.00931-09","title":"Efficacy of Posaconazole against Three Clinical <i>Aspergillus fumigatus</i> Isolates with Mutations in the <i>cyp51A</i> Gene","year":2009,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Posaconazole; Aspergillus fumigatus; Pharmacodynamics; Pharmacokinetics; Minimum inhibitory concentration; Liter; Biology; Aspergillosis; Area under the curve; Microbiology; Pharmacology; Confidence interval; Medicine; Internal medicine; Antibiotics; Immunology; Amphotericin B; Antifungal","score_opus":0.019071569214229145,"score_gpt":0.2991975082252959,"score_spread":0.28012593901106675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170688673","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927998,0.00009548413,0.00009924684,0.0057007032,0.000030714447,0.0004332719,0.000014220868,0.000016916098,0.0008096033],"genre_scores_gemma":[0.9759464,0.0011295857,0.0004665991,0.022259448,0.00007794387,0.0000016313157,0.00003875797,0.00001290491,0.000066701075],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989013,0.00004213921,0.00040566793,0.00028625078,0.0001392331,0.00022538165],"domain_scores_gemma":[0.99940103,0.00007751249,0.000102021,0.00028864635,0.000065480206,0.00006529854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025902438,0.00016524793,0.00036823557,0.000039651757,0.00008251955,0.000020857222,0.00012003469,0.00009830767,0.000026596997],"category_scores_gemma":[0.000016733626,0.00010036378,0.00011944589,0.0002102889,0.00022943811,0.00006199739,0.000008875071,0.00020764022,0.000003591128],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036212136,0.003029672,0.8624526,0.00006786793,0.00017980323,0.00007778722,0.0015692364,0.000017284568,0.076326914,0.0001406648,0.006837984,0.04567897],"study_design_scores_gemma":[0.005422631,0.00056348677,0.98383635,0.00011469737,0.000053091622,0.000021456277,0.000100189645,0.00006388775,0.007337366,0.00006609752,0.0022795347,0.00014120346],"about_ca_topic_score_codex":0.000029290828,"about_ca_topic_score_gemma":0.000071016875,"teacher_disagreement_score":0.12138376,"about_ca_system_score_codex":0.000011477171,"about_ca_system_score_gemma":0.0000655865,"threshold_uncertainty_score":0.40927163},"labels":[],"label_agreement":null},{"id":"W2171281278","doi":"10.1139/w08-060","title":"Variation of cell surface hydrophobicity and biofilm formation among genotypes of<i>Candida albicans</i>and<i>Candida dubliniensis</i>under antifungal treatment","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Candida dubliniensis; Biofilm; Candida albicans; Genotype; Corpus albicans; Microbiology; Biology; Fluconazole; Antifungal; Bacteria; Biochemistry; Genetics; Gene","score_opus":0.013484595427680284,"score_gpt":0.2141507776899399,"score_spread":0.2006661822622596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171281278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99737674,0.0017069797,0.00023735582,0.00016192607,0.00011437209,0.00016465518,0.00009782117,0.0000024274407,0.00013770844],"genre_scores_gemma":[0.9982515,0.00075434695,0.0006913349,0.00009836486,0.000036006804,3.73878e-7,0.000022292483,0.000009024909,0.00013678259],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9989428,0.00007579305,0.0005477747,0.0001484002,0.000056915553,0.0002283017],"domain_scores_gemma":[0.99879843,0.000085656386,0.0004211238,0.00013838796,0.00027700953,0.00027936895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002498696,0.00014005524,0.0005233809,0.00018577074,0.00009962001,0.0000051751495,0.00005581757,0.00015675677,0.000071993156],"category_scores_gemma":[0.000047151585,0.00011143023,0.00009932662,0.00012650195,0.00048035782,0.00010753986,0.000008129295,0.00013795984,0.0000010822826],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016554739,0.000045993165,0.28260428,0.00006349424,0.0000749555,0.00004168465,0.0010667389,0.000021361731,0.71565175,0.000018018038,0.00014129204,0.000104895764],"study_design_scores_gemma":[0.002245386,0.001278756,0.84550655,0.00008637839,0.00019476975,0.00084001437,0.0003374727,0.000052145137,0.14861663,0.0000374558,0.00066916284,0.00013526961],"about_ca_topic_score_codex":0.0069738897,"about_ca_topic_score_gemma":0.011725858,"teacher_disagreement_score":0.5670351,"about_ca_system_score_codex":0.00014796427,"about_ca_system_score_gemma":0.00086341717,"threshold_uncertainty_score":0.99963874},"labels":[],"label_agreement":null},{"id":"W2171544341","doi":"10.1111/j.1365-2958.2009.06631.x","title":"The <i>Aspergillus fumigatus</i> transcription factor Ace2 governs pigment production, conidiation and virulence","year":2009,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"NIH Clinical Center; National Center for Research Resources; National Institute of Allergy and Infectious Diseases; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Toyota USA","keywords":"Conidiation; Biology; Aspergillus fumigatus; Virulence; Virulence factor; Transcription factor; Microbiology; Aspergillus nidulans; Fungal protein; Cell biology; Gene; Genetics; Saccharomyces cerevisiae; Mutant","score_opus":0.006306758392146585,"score_gpt":0.23429756918621417,"score_spread":0.22799081079406758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171544341","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98980147,0.0029373434,0.0009851732,0.0054301564,0.00018571685,0.0004094453,0.00002267813,0.000034908757,0.00019311173],"genre_scores_gemma":[0.9972237,0.00075125083,0.00012095003,0.0013305201,0.000045119847,0.0000061169803,0.00004782324,0.000006784183,0.00046773627],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99912626,0.000080300226,0.00019250602,0.00031692846,0.00006312421,0.00022086779],"domain_scores_gemma":[0.99953204,0.000017706157,0.000055263663,0.00025411329,0.00008616523,0.00005471453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015076497,0.00012255498,0.00016449495,0.000018843464,0.00015382016,0.000015178312,0.000055822704,0.00010407338,0.000017027327],"category_scores_gemma":[0.000091739385,0.00008517533,0.00006293463,0.00007702326,0.00016401497,0.00004170542,0.00000979857,0.00014272604,0.0000147378505],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018167032,0.00004933337,0.0022691828,0.000013365972,0.000021171227,0.0000071735935,0.00012555186,0.0000016351328,0.99211615,0.0004228421,0.00045547643,0.0043364596],"study_design_scores_gemma":[0.0009556884,0.0007303159,0.15188588,0.00004842135,0.00008204445,0.00014237575,0.00016097182,0.000018243954,0.7814361,0.0003520123,0.063967414,0.00022054162],"about_ca_topic_score_codex":0.000008311661,"about_ca_topic_score_gemma":0.00002635325,"teacher_disagreement_score":0.21068005,"about_ca_system_score_codex":0.00007839683,"about_ca_system_score_gemma":0.000042565054,"threshold_uncertainty_score":0.3473349},"labels":[],"label_agreement":null},{"id":"W2171556042","doi":"10.1080/15459624.2011.601994","title":"Performance of Two Different Limulus Amebocyte Lysate Assays for the Quantitation of Fungal Glucan","year":2011,"lang":"en","type":"article","venue":"Journal of Occupational and Environmental Hygiene","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Paracel Laboratories; Carleton University","funders":"Health Canada; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Laminarin; Limulus amebocyte lysate; Curdlan; Glucan; Mannan; Pullulan; Microbiology; Beta-glucan; Chemistry; Polysaccharide; Biology; Biochemistry; Immunology","score_opus":0.0549900098644992,"score_gpt":0.29559438984241565,"score_spread":0.24060437997791645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171556042","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982726,0.00033522423,0.0010388191,0.000030236168,0.00007725543,0.00013197753,0.000031187938,0.0000011171409,0.00008160019],"genre_scores_gemma":[0.9984142,0.00038177238,0.0010438284,0.000023132965,0.00005402234,0.0000018237297,0.000008067061,0.0000056086683,0.00006754899],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991112,0.000016743035,0.00042622513,0.000073402174,0.00028142714,0.000091025],"domain_scores_gemma":[0.99931335,0.00013790677,0.00035808966,0.00008939228,0.00004658285,0.000054678312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034630566,0.00007910284,0.00021592093,0.000046660945,0.000053828106,0.0000020634454,0.000058660014,0.000026853426,0.00005242044],"category_scores_gemma":[0.00003261119,0.000047081558,0.00011553429,0.00003138453,0.00016621126,0.00009924547,0.000019200363,0.000076739816,5.3915505e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0053202263,0.0003148719,0.9139752,0.00008686981,0.000085317566,0.0000017301195,0.00037704798,0.000025018411,0.07215664,0.00013953142,0.000015581965,0.0075019663],"study_design_scores_gemma":[0.0012187196,0.001193131,0.95189774,0.000058856647,0.00012832004,0.000023866238,0.00043086684,0.0011918719,0.043722153,0.00006867648,0.00002288889,0.000042885644],"about_ca_topic_score_codex":0.0000096483745,"about_ca_topic_score_gemma":0.000008928368,"teacher_disagreement_score":0.03792256,"about_ca_system_score_codex":0.000044263183,"about_ca_system_score_gemma":0.000029610563,"threshold_uncertainty_score":0.19199303},"labels":[],"label_agreement":null},{"id":"W2173204038","doi":"10.1139/cjm-2015-0457","title":"The correlation of virulence, pathogenicity, and itraconazole resistance with SAP activity in <i>Candida albicans</i> strains","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Itraconazole; Candida albicans; Virulence; Microbiology; Corpus albicans; Biology; Drug resistance; Antifungal; Gene; Genetics","score_opus":0.01294409426259058,"score_gpt":0.23343286208202874,"score_spread":0.22048876781943816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2173204038","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99618244,0.0018251269,0.00012914777,0.00088466104,0.0000735456,0.0001071594,0.00004623888,0.00000101355,0.00075069466],"genre_scores_gemma":[0.9993687,0.000080543316,0.0001323396,0.00012958726,0.000026686383,5.809112e-7,0.000002607535,0.000005116379,0.000253811],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99929005,0.00009983965,0.00025653484,0.000101028476,0.0000519761,0.00020055381],"domain_scores_gemma":[0.99911654,0.00008775224,0.00020071902,0.00012110453,0.00021473675,0.000259155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061365246,0.00007727193,0.00025417967,0.0000867219,0.000054403175,0.0000069973726,0.000082166334,0.00008384111,0.000010861224],"category_scores_gemma":[0.00017112395,0.000049927563,0.000035515026,0.0001226513,0.0004575754,0.00005830066,0.0000055266228,0.00026247062,6.4367697e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014833765,0.00004147344,0.797695,0.00004296526,0.00006150756,0.00022578107,0.00082379713,0.000019041718,0.19550422,0.00037629282,0.0014975056,0.002229072],"study_design_scores_gemma":[0.0025209987,0.0007695175,0.9781715,0.00026526485,0.00006512424,0.00056820683,0.0012437096,0.000012138851,0.004653704,0.000324686,0.011273786,0.00013133197],"about_ca_topic_score_codex":0.0013595163,"about_ca_topic_score_gemma":0.33456573,"teacher_disagreement_score":0.3332062,"about_ca_system_score_codex":0.00013850132,"about_ca_system_score_gemma":0.0019046316,"threshold_uncertainty_score":0.6775767},"labels":[],"label_agreement":null},{"id":"W2173210201","doi":"10.1371/journal.ppat.1005308","title":"Global Analysis of the Fungal Microbiome in Cystic Fibrosis Patients Reveals Loss of Function of the Transcriptional Repressor Nrg1 as a Mechanism of Pathogen Adaptation","year":2015,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; St. Michael's Hospital; University of Toronto","funders":"Canadian Institutes of Health Research; University of Toronto","keywords":"Biology; Microbiology; Microbiome; Candida albicans; Genetics; Host adaptation; Genome; Gene","score_opus":0.025549801155163768,"score_gpt":0.25012527070939844,"score_spread":0.22457546955423469,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2173210201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99644,0.00019734277,0.0004749517,0.000041267114,0.00009405382,0.00055232557,0.0020773592,0.0000053465496,0.000117377356],"genre_scores_gemma":[0.99948376,0.000010063893,0.00031243076,0.000030976164,0.000012018456,0.000015480147,0.00007734839,0.0000087424705,0.000049151156],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99779266,0.0002777234,0.00079619547,0.0002663747,0.0007105153,0.00015652481],"domain_scores_gemma":[0.9980483,0.00006897913,0.0005367023,0.0005706369,0.0007162603,0.000059133166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005047981,0.00013713703,0.0005745089,0.00011034939,0.000027808635,0.0000021519645,0.00016905449,0.0001248585,0.00004210998],"category_scores_gemma":[0.0004715495,0.00008950691,0.0004461101,0.001364613,0.00016845294,0.000057255136,0.000045755518,0.00008379313,0.0000010051193],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007729173,0.00059433223,0.5781874,0.00018118539,0.00030802615,8.2582227e-7,0.000667753,0.00014970142,0.418604,0.00042416048,0.000007963154,0.00010171557],"study_design_scores_gemma":[0.0010200617,0.00034548438,0.9727327,0.00025518826,0.0024128272,0.0000010330483,0.00046563405,0.0004727584,0.021252722,0.00096924254,0.0000030341378,0.00006929758],"about_ca_topic_score_codex":0.00010174785,"about_ca_topic_score_gemma":0.00017186099,"teacher_disagreement_score":0.39735126,"about_ca_system_score_codex":0.00010879759,"about_ca_system_score_gemma":0.0002143843,"threshold_uncertainty_score":0.36499858},"labels":[],"label_agreement":null},{"id":"W2173488381","doi":"10.5863/1551-6776-19.3.196","title":"Usefulness of Defined Daily Dose and Days of Therapy in Pediatrics and Obstetrics-Gynecology: A Comparative Analysis of Antifungal Drugs (2000–2001, 2005–2006, and 2010–2011)","year":2014,"lang":"en","type":"article","venue":"The Journal of Pediatric Pharmacology and Therapeutics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Obstetrics and gynaecology; Medicine; Obstetrics; Antifungal; Pediatrics; Pregnancy; Biology","score_opus":0.04385818733506772,"score_gpt":0.3250190241111137,"score_spread":0.281160836776046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2173488381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96986014,0.029225813,0.000112031346,0.00026946282,0.00018638207,0.00025524138,0.000035745525,0.0000031153131,0.000052097355],"genre_scores_gemma":[0.9194779,0.07999453,0.00016550989,0.00020990246,0.000101306105,0.000001343282,0.0000024411338,0.00000852839,0.00003858752],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99778074,0.0005587422,0.00091157225,0.00019143808,0.00026224376,0.0002952837],"domain_scores_gemma":[0.99470794,0.0036319392,0.0009745476,0.00016762388,0.00037117532,0.00014675043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025697188,0.00021357223,0.001167344,0.00075503066,0.00007612859,0.000005630963,0.00013958849,0.00019424448,0.000056770077],"category_scores_gemma":[0.00013305819,0.00014381521,0.000100716374,0.0007654004,0.00066107995,0.000106999265,0.000061000872,0.00045973127,2.0020622e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030592186,0.0005460601,0.9789922,0.00019769151,0.0010528261,0.000007543422,0.004139973,0.000034154815,0.00891839,0.00006204684,0.00025438995,0.0027354578],"study_design_scores_gemma":[0.0060844505,0.0014447542,0.9815334,0.000009750061,0.006843976,0.000026174268,0.00090596237,0.0011145334,0.0014421217,0.000277113,0.00017780134,0.00013995024],"about_ca_topic_score_codex":0.00003837284,"about_ca_topic_score_gemma":0.000042319873,"teacher_disagreement_score":0.050768714,"about_ca_system_score_codex":0.000029167713,"about_ca_system_score_gemma":0.00024918377,"threshold_uncertainty_score":0.58646137},"labels":[],"label_agreement":null},{"id":"W2175975424","doi":"10.1093/jac/dkv380","title":"Phase 3 pharmacokinetics and safety study of a posaconazole tablet formulation in patients at risk for invasive fungal disease","year":2015,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":169,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Juravinski Hospital","funders":"National Cancer Institute; National Institutes of Health","keywords":"Posaconazole; Pharmacokinetics; Medicine; Pharmacology; Antifungal; Dermatology; Amphotericin B","score_opus":0.020263148401889516,"score_gpt":0.3088291222517037,"score_spread":0.2885659738498142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2175975424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99849707,0.00010240386,0.00016710382,0.00021479958,0.000090876085,0.00082126807,0.0000895181,0.000003084028,0.0000138677005],"genre_scores_gemma":[0.99889773,0.00026710992,0.0004102198,0.00026608704,0.000085901615,0.0000012602839,0.000015527077,0.000016626293,0.000039557654],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99880964,0.000052008043,0.0006074837,0.00013805286,0.00024138126,0.0001514615],"domain_scores_gemma":[0.9986305,0.00007311751,0.00048791498,0.00011509188,0.0005026641,0.00019070276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044228943,0.00012724841,0.00042014933,0.000116421514,0.00003993625,0.000008605693,0.000060754686,0.00004684923,0.000015591724],"category_scores_gemma":[0.00018311421,0.00010328628,0.000098474906,0.00011277811,0.00003949098,0.00014219058,0.000018257826,0.00013471249,3.4119756e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.060489126,0.0055069416,0.8924458,0.000112622474,0.00011525871,0.000013383242,0.0014517792,0.00005055515,0.036028262,0.0000010561978,0.0016588487,0.0021263903],"study_design_scores_gemma":[0.13225041,0.0074046594,0.82125,0.00019926368,0.00030532363,0.000009878848,0.00040621764,0.00031965302,0.037095167,0.000045665634,0.0005390929,0.00017466486],"about_ca_topic_score_codex":0.0000135378505,"about_ca_topic_score_gemma":0.00003515488,"teacher_disagreement_score":0.07176128,"about_ca_system_score_codex":0.00013218245,"about_ca_system_score_gemma":0.00017971685,"threshold_uncertainty_score":0.42118922},"labels":[],"label_agreement":null},{"id":"W2180240824","doi":"10.1139/cjm-2013-0176","title":"Antifungal susceptibility of emerging opportunistic yeasts and yeast-like fungi from <i>Rhea americana</i>","year":2013,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Microbiology; Trichosporon; Fluconazole; Biology; Itraconazole; Geotrichum; Rhodotorula; Yeast; Feces; Amphotericin B; Cloaca; Antifungal; Ecology","score_opus":0.01477865542675873,"score_gpt":0.23744813212869045,"score_spread":0.2226694767019317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2180240824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996042,0.0021371646,0.0001424419,0.0005636396,0.00035063233,0.00017119918,0.00023386956,0.0000043595574,0.0003547011],"genre_scores_gemma":[0.9981129,0.00011696384,0.0007759657,0.0005780793,0.000113095804,8.9132294e-7,0.000040535517,0.00001532354,0.000246247],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99857813,0.000109742614,0.0006187887,0.00024000132,0.000068423986,0.00038492543],"domain_scores_gemma":[0.99813116,0.00009120731,0.0003258009,0.000284426,0.00041001601,0.0007574101],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00030382402,0.00016501658,0.0006369522,0.00018611843,0.000066488894,0.000013084987,0.0001478107,0.00013761494,0.0015969925],"category_scores_gemma":[0.0002199785,0.00014069353,0.00014559283,0.00013440514,0.0006503152,0.000085877815,0.000019693722,0.00031721592,0.000024889949],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008404577,0.000032244257,0.46653765,0.000050292623,0.00011109701,0.00012216695,0.00023405068,5.366876e-7,0.51699936,0.000027594018,0.007997151,0.0078037935],"study_design_scores_gemma":[0.0013710523,0.0007793775,0.97174835,0.00026600072,0.00022994172,0.0006945779,0.0017222657,0.000018968765,0.0042661466,0.00021709708,0.018406078,0.00028013124],"about_ca_topic_score_codex":0.01727777,"about_ca_topic_score_gemma":0.028933737,"teacher_disagreement_score":0.5127332,"about_ca_system_score_codex":0.00011522008,"about_ca_system_score_gemma":0.0013862588,"threshold_uncertainty_score":0.9993157},"labels":[],"label_agreement":null},{"id":"W2188528372","doi":"10.82308/10368","title":"Transcriptional regulation of carbohydrate metabolism in «Candida albicans»","year":2010,"lang":"en","type":"article","venue":"eScholarship@McGill (McGill)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Candida albicans; Biology; Tandem affinity purification; Chromatin immunoprecipitation; Computational biology; DNA microarray; Genome; Gene; Genetics; Cell biology; Biochemistry; Gene expression; Affinity chromatography; Promoter","score_opus":0.013922028202382659,"score_gpt":0.2428247547473694,"score_spread":0.22890272654498672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2188528372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9762165,0.00011959227,0.0000010351256,0.00010137555,0.00039379104,0.00042920595,0.00026199553,0.000062820895,0.022413712],"genre_scores_gemma":[0.9975132,0.00004491129,0.0009636867,0.00020807482,0.00004858391,0.000028009348,0.00006443809,0.000043305066,0.0010858441],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99750614,0.00014284898,0.000733339,0.0005540624,0.0006402756,0.00042330497],"domain_scores_gemma":[0.9985723,0.000108515844,0.00017427422,0.00060191803,0.00028944027,0.00025356625],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00096018135,0.00027770086,0.0005947705,0.00028083703,0.00018759015,0.000012001256,0.00018717287,0.00031378705,0.0009201962],"category_scores_gemma":[0.0004984813,0.0002629517,0.00025597902,0.00058529316,0.0001976802,0.00042513333,0.000034965487,0.0009637047,0.000041425566],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041977907,0.00024442066,0.0065490906,0.0000907128,0.000043844615,0.000017165357,0.0000074948875,0.000008672566,0.8792667,0.10147135,0.0000012230989,0.011879539],"study_design_scores_gemma":[0.002293246,0.00010915266,0.77215284,0.00011716232,0.00013651198,0.000019162459,0.0000558982,0.000094154835,0.19121411,0.016872985,0.016608959,0.00032577795],"about_ca_topic_score_codex":0.000492399,"about_ca_topic_score_gemma":0.0032168757,"teacher_disagreement_score":0.7656038,"about_ca_system_score_codex":0.00014494365,"about_ca_system_score_gemma":0.0000798815,"threshold_uncertainty_score":0.9999931},"labels":[],"label_agreement":null},{"id":"W2189861011","doi":"10.1016/s0140-6736(15)01159-9","title":"Isavuconazole versus voriconazole for primary treatment of invasive mould disease caused by Aspergillus and other filamentous fungi (SECURE): a phase 3, randomised-controlled, non-inferiority trial","year":2015,"lang":"en","type":"article","venue":"The Lancet","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":972,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba; University of Manitoba","funders":"","keywords":"Voriconazole; Medicine; Clinical endpoint; Internal medicine; Population; Adverse effect; Clinical trial; Surgery; Gastroenterology; Antifungal","score_opus":0.06051365071297336,"score_gpt":0.33749463204038727,"score_spread":0.2769809813274139,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2189861011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9865971,0.0044851466,0.00018225715,0.0010222218,0.00030821437,0.0051023723,0.0008054634,0.000033013865,0.0014642059],"genre_scores_gemma":[0.99668175,0.00042111435,0.00007012482,0.00055682077,0.0007889679,0.00046607768,0.00010226501,0.00002455683,0.0008883474],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9985374,0.000110332294,0.000414827,0.00031078423,0.00029331987,0.00033331025],"domain_scores_gemma":[0.99809414,0.000707988,0.00020291607,0.00056340307,0.0001300156,0.00030152142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051827,0.0002460632,0.0012505233,0.000031150506,0.000083335384,0.000024996674,0.000117047,0.000086406406,0.000047593476],"category_scores_gemma":[0.00053298456,0.00014685131,0.00023265902,0.00007215279,0.00017081479,0.00006629824,0.000026246264,0.00009263088,0.000006107172],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9753344,0.0013403497,0.0029261308,0.00014622191,0.00048068486,0.000015605134,0.0007835214,0.0000023731827,0.008460024,0.0000711092,0.008175745,0.0022638165],"study_design_scores_gemma":[0.97948825,0.0044421013,0.0021265561,0.00003784043,0.0009368095,0.0000011146277,0.00027873865,0.00025066917,0.0023601921,0.00018709122,0.009713852,0.0001767711],"about_ca_topic_score_codex":0.000095640244,"about_ca_topic_score_gemma":0.000078820165,"teacher_disagreement_score":0.010084621,"about_ca_system_score_codex":0.00019257636,"about_ca_system_score_gemma":0.00036781564,"threshold_uncertainty_score":0.59884226},"labels":[],"label_agreement":null},{"id":"W2195839407","doi":"10.1371/journal.pone.0137947","title":"Functional Divergence of Hsp90 Genetic Interactions in Biofilm and Planktonic Cellular States","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; University of Bath; Natural Sciences and Engineering Research Council of Canada; Wellcome Trust","keywords":"Biofilm; Filamentation; Candida albicans; Biology; Hsp90; Transcription factor; Cell biology; Corpus albicans; Microbiology; Genetics; Gene; Heat shock protein; Bacteria","score_opus":0.0845994922806233,"score_gpt":0.26631535270949386,"score_spread":0.18171586042887056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2195839407","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982559,0.0008793204,0.00012043,0.00018515933,0.000030681407,0.00012144429,0.00001555124,0.000010364797,0.00038113535],"genre_scores_gemma":[0.99798113,0.00017861847,0.00092483993,0.0000385901,0.000029193701,0.000005598242,0.000022751907,0.0000046829136,0.00081461563],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99938124,0.000019478975,0.0001622454,0.00013546602,0.00020396576,0.00009759174],"domain_scores_gemma":[0.9996165,0.00004289303,0.000034750425,0.00012577143,0.00009684951,0.00008320461],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009247309,0.00005581589,0.00016070234,0.000058396596,0.000015631727,0.0000031839197,0.00002478943,0.000022372365,0.0002035307],"category_scores_gemma":[0.0001075055,0.000049648617,0.000018395143,0.0000970623,0.00007224379,0.00004479681,0.00002387353,0.000096843476,0.000026854139],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024924445,0.0007205711,0.87230575,0.00011643464,0.0000503198,0.00001125587,0.0002443205,0.0000071491395,0.12590508,0.000026537673,0.00022899188,0.00013435897],"study_design_scores_gemma":[0.0007358177,0.00023238505,0.9362875,0.00019940687,0.00008826339,0.0000025293116,0.0004796946,0.0010322066,0.060419284,0.00037268925,0.00007792059,0.00007228988],"about_ca_topic_score_codex":0.000110719586,"about_ca_topic_score_gemma":0.00015130398,"teacher_disagreement_score":0.065485805,"about_ca_system_score_codex":0.000038992504,"about_ca_system_score_gemma":0.00007085655,"threshold_uncertainty_score":0.22285184},"labels":[],"label_agreement":null},{"id":"W2196131174","doi":"10.5858/2001-125-0344-eotcel","title":"Evaluation of the Candigen Enzyme-Linked Immunosorbent Assay for Quantitative Detection of Candida Species Antigen","year":2001,"lang":"en","type":"article","venue":"Archives of Pathology & Laboratory Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Polymerase chain reaction; Antigen; Positive predicative value; Biology; Medicine; Predictive value; Microbiology; Immunology; Internal medicine; Gene","score_opus":0.04529078864357745,"score_gpt":0.33531602510320685,"score_spread":0.2900252364596294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2196131174","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99055743,0.0037333888,0.0028285303,0.0003798608,0.00025747842,0.00092857366,0.000100495134,0.000009564917,0.0012047028],"genre_scores_gemma":[0.99869,0.0005882466,0.00039799625,0.00006604755,0.00007452165,0.000028379787,0.00002469295,0.000013095039,0.00011701956],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99791235,0.00048235286,0.0006200768,0.00023967352,0.0005555826,0.00018994391],"domain_scores_gemma":[0.9973681,0.000658024,0.0004937149,0.0004628212,0.00096545,0.000051864034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023242948,0.00014365857,0.0005806342,0.0001561468,0.00008128963,8.0191757e-7,0.00014014421,0.0000830093,0.000059334645],"category_scores_gemma":[0.0029235114,0.00009318765,0.00012593406,0.00033385912,0.0013281661,0.000041334955,0.00003005388,0.00014657898,4.9923176e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009664032,0.00012924515,0.11602192,0.00013862985,0.00013424015,0.000004999124,0.0038757243,0.000013459872,0.8751297,0.00051623065,0.000033342916,0.003036093],"study_design_scores_gemma":[0.002449471,0.0012523115,0.75731385,0.0002931374,0.00050920807,0.000008126605,0.00333021,0.00033359282,0.23312975,0.00093175384,0.0003806021,0.00006796472],"about_ca_topic_score_codex":0.00015386095,"about_ca_topic_score_gemma":0.0010236546,"teacher_disagreement_score":0.64199996,"about_ca_system_score_codex":0.000054293007,"about_ca_system_score_gemma":0.00059057435,"threshold_uncertainty_score":0.48936832},"labels":[],"label_agreement":null},{"id":"W2198551535","doi":"10.1155/2004/183087","title":"An Economic Evaluation of Voriconazole versus Amphotericin B for the Treatment of Invasive Aspergillosis in Canada","year":2004,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Pfizer (Canada); Hôpital Maisonneuve-Rosemont; McMaster University","funders":"Hospital for Sick Children; Hamilton Health Sciences; University of Alberta; Pfizer","keywords":"Voriconazole; Aspergillosis; Amphotericin B; Medicine; Intensive care medicine; Antifungal; Immunology; Dermatology","score_opus":0.015785139533960667,"score_gpt":0.2755215167053598,"score_spread":0.25973637717139914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2198551535","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954243,0.0034431394,0.000015567877,0.0004210312,0.00033649386,0.00021816438,0.00012543912,4.936797e-7,0.000015409036],"genre_scores_gemma":[0.99906915,0.000713259,0.0000064744554,0.00012289081,0.000065119646,0.0000052971423,0.0000130823855,0.000003747649,9.717742e-7],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993683,0.00004923535,0.00030560384,0.00008378071,0.0000590456,0.00013402324],"domain_scores_gemma":[0.99905056,0.0002168362,0.00013768172,0.00008667824,0.00016596564,0.00034226134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019570871,0.000068246576,0.00028889714,0.00007554953,0.000033439057,0.0000019776228,0.000047816535,0.00005247743,0.00010558546],"category_scores_gemma":[0.00032893952,0.00004416799,0.00007549585,0.000041671137,0.00016635873,0.000021512993,0.0000017598206,0.000047400972,1.2880957e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008885687,0.00023408375,0.9676483,0.00007601662,0.00030788666,0.000043596927,0.00035667117,0.000621739,0.0038994995,0.000121569865,0.00011449198,0.02568754],"study_design_scores_gemma":[0.013187062,0.0047901175,0.97648025,0.00015779205,0.0006442424,0.0001311196,0.0012708957,0.000111043344,0.0023285476,0.00021962122,0.0005857264,0.00009360224],"about_ca_topic_score_codex":0.791398,"about_ca_topic_score_gemma":0.9930369,"teacher_disagreement_score":0.20163895,"about_ca_system_score_codex":0.0015292247,"about_ca_system_score_gemma":0.017596481,"threshold_uncertainty_score":0.98797286},"labels":[],"label_agreement":null},{"id":"W2239713988","doi":"10.1139/cjm-2015-0766","title":"Pathogenic <i>Candida</i> species differ in the ability to grow at limiting potassium concentrations","year":2016,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Potassium; Biology; Candida krusei; Yeast; Corpus albicans; Biochemistry; Intracellular; Candida albicans; Microbiology; Chemistry","score_opus":0.017405807363618554,"score_gpt":0.23298028216405195,"score_spread":0.2155744748004334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2239713988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98196816,0.00039357843,0.00006709426,0.0164675,0.00019714575,0.00016322594,0.000110490306,0.0000018901079,0.00063093595],"genre_scores_gemma":[0.99662626,0.000028159833,0.00005896538,0.0027216107,0.00015516853,0.0000018271372,0.0000052247606,0.0000057188076,0.00039703763],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99893665,0.00016550241,0.00036576643,0.00013948788,0.00004551796,0.00034704377],"domain_scores_gemma":[0.99904597,0.0002280092,0.000095678246,0.00020320454,0.00013491721,0.00029221855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053403503,0.00009335391,0.00025090008,0.0000917668,0.00010317324,0.000010006886,0.0001597818,0.000083278,0.00039065394],"category_scores_gemma":[0.0005363702,0.000048885937,0.00011314808,0.00011459131,0.00025756814,0.000037601483,0.000010692729,0.00016941437,0.000029047746],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005748225,0.000011386746,0.42716232,0.0000057037228,0.000007691061,0.00010101473,0.00034004904,1.9327311e-7,0.5669004,0.00008508731,0.005003487,0.0003251887],"study_design_scores_gemma":[0.0007082529,0.00023681087,0.9478261,0.00009445588,0.000027004904,0.0006422051,0.00042004324,1.287582e-7,0.007168707,0.000064788386,0.04273177,0.00007974174],"about_ca_topic_score_codex":0.00020148147,"about_ca_topic_score_gemma":0.07913774,"teacher_disagreement_score":0.55973166,"about_ca_system_score_codex":0.0004619828,"about_ca_system_score_gemma":0.0007394309,"threshold_uncertainty_score":0.9376656},"labels":[],"label_agreement":null},{"id":"W2240189374","doi":"10.1093/cid/civ676","title":"Development of New Strategies for Echinocandins: Progress in Translational Research","year":2015,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Astellas Pharma Global Development; Astellas Pharma; Sick Kids Foundation","keywords":"Echinocandins; Medicine; Intensive care medicine; Translational research; Antifungal; Caspofungin; Pathology; Amphotericin B","score_opus":0.3227769829614953,"score_gpt":0.5277289966417918,"score_spread":0.20495201368029653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2240189374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99544394,0.0012058216,0.001553239,0.0002341117,0.00009617049,0.0005939544,0.00001295175,0.000032919394,0.00082686957],"genre_scores_gemma":[0.9984098,0.000020269828,0.001149547,0.000044441036,0.00016398268,0.00004082515,0.00003385906,0.0000090433505,0.00012821783],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985655,0.00009001899,0.00057480717,0.00023397928,0.00033106183,0.00020462915],"domain_scores_gemma":[0.9987079,0.0004317734,0.000059267637,0.00015538462,0.00032714073,0.00031852626],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011308227,0.000079163496,0.00030979063,0.00009746137,0.0000471125,0.000016487524,0.000059397065,0.00008989661,0.00002781639],"category_scores_gemma":[0.000933394,0.000064546126,0.00011997097,0.00021397114,0.00027217632,0.000089418056,0.00001672902,0.00017472422,0.0000073275382],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006955588,0.0010577036,0.9650518,0.00014405492,0.000034367087,0.000004085838,0.0003673741,0.000004191905,0.0000060906777,0.0017535044,0.0014061593,0.02947514],"study_design_scores_gemma":[0.0028495085,0.00052646094,0.9727304,0.00012547539,0.000026839009,4.8084075e-7,0.00066827633,0.00007427293,0.00002505686,0.020758733,0.0021447078,0.00006980266],"about_ca_topic_score_codex":0.000014165563,"about_ca_topic_score_gemma":0.0004665912,"teacher_disagreement_score":0.029405337,"about_ca_system_score_codex":0.00005988783,"about_ca_system_score_gemma":0.0038021656,"threshold_uncertainty_score":0.6744879},"labels":[],"label_agreement":null},{"id":"W2252603169","doi":"","title":"Candidiasis in Very Low Birth-Weight Premature Infants: Risk and Outcomes in a Canadian Multicentre Study","year":2008,"lang":"en","type":"article","venue":"46th Annual Meeting","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Premature birth; Low birth weight; Birth weight; Pediatrics; Obstetrics; Gestational age; Pregnancy","score_opus":0.007026127976159873,"score_gpt":0.25123922105405705,"score_spread":0.24421309307789718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2252603169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99734586,0.0008441873,3.4603246e-7,0.00017676866,0.00007737567,0.000721407,0.00007012127,0.000024864788,0.00073904847],"genre_scores_gemma":[0.9991588,0.00022028874,0.00011258688,0.000212449,0.000047254645,0.000016305672,0.0000066618372,0.000018063647,0.00020760819],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99821633,0.0001573212,0.00038966784,0.00040051978,0.00025384504,0.0005822989],"domain_scores_gemma":[0.99901164,0.00020860865,0.00007772307,0.0002591583,0.00007571381,0.00036717596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057247444,0.00019914417,0.00048795028,0.00028842458,0.00014743992,0.0000150746655,0.0000752847,0.00013189053,0.000027215028],"category_scores_gemma":[0.0019525039,0.00016378258,0.00005006682,0.00035286343,0.00006897307,0.00018394295,0.00003646126,0.00046269235,0.000008151595],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023710218,0.00025587511,0.98164827,0.00008067303,0.000024666,0.0007124252,0.015813686,0.000008216434,0.000021659374,9.1026624e-7,0.00006813931,0.0011284096],"study_design_scores_gemma":[0.0022852563,0.00012140421,0.98382795,0.00024982743,0.000024343226,0.00001008935,0.0129004195,0.00012728648,0.000040433144,0.000003835697,0.00025059568,0.00015858695],"about_ca_topic_score_codex":0.37539667,"about_ca_topic_score_gemma":0.89009553,"teacher_disagreement_score":0.51469886,"about_ca_system_score_codex":0.00023006342,"about_ca_system_score_gemma":0.00036343737,"threshold_uncertainty_score":0.66788596},"labels":[],"label_agreement":null},{"id":"W2254149728","doi":"","title":"Involvement of interleukin-18 in the inflammatory response against oropharyngeal candidiasis.","year":2004,"lang":"en","type":"article","venue":"PubMed","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université Laval","funders":"","keywords":"Candida albicans; Corpus albicans; Oral mucosa; Secretion; Saliva; Immune system; Biology; Microbiology; Immunology; Interleukin; Cytokine; Endocrinology","score_opus":0.03176193913926032,"score_gpt":0.26073935692233047,"score_spread":0.22897741778307015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2254149728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99534845,0.00032027563,0.000008096777,0.0013002336,0.00007579659,0.0008845448,0.0000050511144,0.000016650753,0.0020408914],"genre_scores_gemma":[0.9980635,0.00006518874,0.00002778051,0.0012714912,0.000050642993,0.00033915002,0.000006181234,0.000009369664,0.00016671515],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987212,0.00013742757,0.00035077284,0.00018750124,0.00031688504,0.0002862176],"domain_scores_gemma":[0.9992813,0.000115567076,0.00007558334,0.00038670222,0.000055397468,0.00008546738],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015544688,0.00010612737,0.00024073171,0.00010586001,0.000029145991,0.000010243176,0.00014916215,0.000058924223,0.000016968523],"category_scores_gemma":[0.00043086483,0.00007075001,0.000089742665,0.00021624092,0.00013905067,0.00007761534,0.000033018274,0.00018749187,0.0000064186547],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012534321,0.0010311899,0.9202091,0.00044286903,0.00010626584,0.0005914992,0.007128104,0.000034160035,0.00825775,0.0004332598,0.0015577456,0.047673702],"study_design_scores_gemma":[0.0018174675,0.000081190854,0.99110097,0.000052079162,0.000015474807,0.000002983381,0.0012558042,0.0000010191134,0.0042214533,0.00011519135,0.0012705928,0.00006576584],"about_ca_topic_score_codex":0.000115542236,"about_ca_topic_score_gemma":0.0007011168,"teacher_disagreement_score":0.07089184,"about_ca_system_score_codex":0.0002790888,"about_ca_system_score_gemma":0.00019444349,"threshold_uncertainty_score":0.28851017},"labels":[],"label_agreement":null},{"id":"W2258984734","doi":"10.1155/2014/214813","title":"Serum Voriconazole Level Variability in Patients with Hematological Malignancies Receiving Voriconazole Therapy","year":2014,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; Princess Margaret Cancer Centre; Toronto General Hospital; University Health Network; University of Toronto; University of Alberta","funders":"","keywords":"Voriconazole; Hematologic Neoplasms; Medicine; Internal medicine; Oncology; Intensive care medicine; Dermatology; Cancer; Antifungal","score_opus":0.007630317144293338,"score_gpt":0.21698416699349188,"score_spread":0.20935384984919855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2258984734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99780756,0.00060313847,0.00035001102,0.00066863926,0.00021096319,0.00015766801,0.000041292733,0.0000072322164,0.0001534709],"genre_scores_gemma":[0.99842924,0.0001061907,0.00003735784,0.0012962389,0.00009046445,0.0000025480679,0.000011211391,0.0000087183125,0.000018034858],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99867624,0.00023439447,0.00040522957,0.00021189159,0.00010782792,0.00036439713],"domain_scores_gemma":[0.99827373,0.00027934782,0.00013472977,0.00013732022,0.00024917512,0.00092571677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006656222,0.00015092835,0.0005250941,0.00013761295,0.000078500154,0.000013594769,0.000088948145,0.00019389477,0.00037036577],"category_scores_gemma":[0.0018381899,0.000097140226,0.000086152715,0.00014151796,0.00042600773,0.000058668717,0.000013435356,0.0003364618,0.0000025631455],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022257782,0.0001978687,0.98915195,0.000046951704,0.000041030362,0.000061572406,0.000057952857,6.5252226e-7,0.000098389406,0.00022004744,0.00019621043,0.00970481],"study_design_scores_gemma":[0.0030281816,0.0008991136,0.9931846,0.00016094939,0.000031385433,0.0002223132,0.00003539256,0.0000052468768,0.000027700664,0.00036612473,0.0019293512,0.00010960918],"about_ca_topic_score_codex":0.00066400267,"about_ca_topic_score_gemma":0.0052126828,"teacher_disagreement_score":0.0095952,"about_ca_system_score_codex":0.00014587809,"about_ca_system_score_gemma":0.0011054995,"threshold_uncertainty_score":0.40552455},"labels":[],"label_agreement":null},{"id":"W2261420296","doi":"10.1155/2014/308169","title":"The Prospective Antifungal Therapy Alliance<sup>®</sup> Registry: A Two‐Centre Canadian Experience","year":2014,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont; Hamilton Health Sciences; University Health Network; University of Toronto; McMaster University","funders":"Merck Canada; Sunovion; Astellas Pharma US; Pfizer","keywords":"Medicine; Fluconazole; Voriconazole; Prospective cohort study; Aspergillosis; Internal medicine; Cryptococcosis; Intensive care medicine; Antifungal; Dermatology; Immunology","score_opus":0.005906369506424491,"score_gpt":0.24471929613319385,"score_spread":0.23881292662676937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2261420296","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98760074,0.006691187,0.000043002983,0.0040523023,0.00036250154,0.0002401792,0.000050697774,0.00000967474,0.00094972283],"genre_scores_gemma":[0.99512297,0.0013837582,0.000011002303,0.0027358613,0.00045616447,0.000004705886,0.000010002846,0.000014291541,0.00026127],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99846315,0.00016281955,0.00037963185,0.00025630277,0.00012367987,0.0006143931],"domain_scores_gemma":[0.99645084,0.00019591737,0.00014351284,0.00024746716,0.00032630604,0.002635958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003838739,0.00018558661,0.00040105794,0.00009100312,0.000491693,0.000056026776,0.00020011456,0.00017137195,0.00043158786],"category_scores_gemma":[0.0017769866,0.00011726294,0.00015879229,0.00015231138,0.0011429031,0.000059404836,0.000011821103,0.00045326902,0.000009168254],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017722788,0.000043848755,0.97365314,0.000021183996,0.000121486526,0.00033429728,0.000559407,0.0000024713895,0.00030649788,0.0007481581,0.007916471,0.016115794],"study_design_scores_gemma":[0.005185544,0.0012842775,0.53855634,0.0004425674,0.00013644641,0.0036209305,0.001964893,0.00013476532,0.00013427073,0.0009169341,0.44722602,0.0003969939],"about_ca_topic_score_codex":0.052432433,"about_ca_topic_score_gemma":0.41318268,"teacher_disagreement_score":0.43930954,"about_ca_system_score_codex":0.00030960672,"about_ca_system_score_gemma":0.004321048,"threshold_uncertainty_score":0.9538775},"labels":[],"label_agreement":null},{"id":"W2262404983","doi":"10.1016/j.jaci.2015.12.042","title":"Omalizumab Can be Effective in Patients with Allergic Bronchopulmonary Aspergillosis","year":2016,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Montfort Hospital; University of Ottawa; Ottawa Allergy Research Corporation","funders":"","keywords":"Omalizumab; Medicine; Allergic bronchopulmonary aspergillosis; Asthma; Adverse effect; Retrospective cohort study; Population; Internal medicine; Prednisone; Intensive care medicine; Pediatrics; Immunoglobulin E; Immunology","score_opus":0.01220167763676268,"score_gpt":0.2870964821161839,"score_spread":0.2748948044794212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2262404983","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958007,0.00076194154,0.000022795464,0.0027722528,0.00017498063,0.0001441245,0.0000030951571,0.0000055090627,0.00031463336],"genre_scores_gemma":[0.9965996,0.0025102848,0.00011594407,0.000423839,0.00007216007,0.000002165013,0.0000017696775,0.0000117696145,0.00026242738],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983996,0.00023171093,0.0007312979,0.0002179058,0.00019071354,0.00022876007],"domain_scores_gemma":[0.9986086,0.0005249372,0.00030049967,0.00019467251,0.0002420943,0.00012921904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041014934,0.00014090195,0.00061736687,0.00009712804,0.00003887629,0.0000041287117,0.00009792047,0.00023197988,0.00013675788],"category_scores_gemma":[0.00044466386,0.00007364946,0.00015936999,0.00008874968,0.0004252333,0.000101470774,0.000045217934,0.00041904213,0.0000035307135],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015914783,0.0009581748,0.9430394,0.000007640129,0.0011100572,0.00017816032,0.00005317845,3.4730363e-7,0.00022735586,0.00010923877,0.0001231512,0.0382785],"study_design_scores_gemma":[0.009793915,0.0071935277,0.9804252,0.00024176009,0.00006439423,0.000047722133,0.00008072595,0.0000010041855,0.0000477767,0.00015833929,0.0018497141,0.00009592508],"about_ca_topic_score_codex":0.000026870915,"about_ca_topic_score_gemma":0.0003342681,"teacher_disagreement_score":0.038182575,"about_ca_system_score_codex":0.00008908884,"about_ca_system_score_gemma":0.00011999717,"threshold_uncertainty_score":0.30033377},"labels":[],"label_agreement":null},{"id":"W2270500822","doi":"10.1016/j.jaci.2015.12.039","title":"Efficacious Use of Omalizumab in the Treatment of Cystic Fibrosis","year":2016,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa; Ottawa Allergy Research Corporation","funders":"","keywords":"Omalizumab; Medicine; Allergic bronchopulmonary aspergillosis; Prednisone; Cystic fibrosis; Cystic fibrosis-related diabetes; Asthma; Diabetes mellitus; Budesonide; Corticosteroid; Internal medicine; Pediatrics; Surgery; Immunoglobulin E; Immunology; Insulin resistance; Impaired glucose tolerance; Endocrinology","score_opus":0.04636061886141107,"score_gpt":0.3428747151201792,"score_spread":0.2965140962587681,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2270500822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962068,0.0024026257,0.000100888574,0.0010769923,0.000098822566,0.00006798221,0.0000028999682,0.0000012219854,0.00004172864],"genre_scores_gemma":[0.9836754,0.015853338,0.00023414694,0.000053884603,0.000040995677,6.2256555e-7,3.6650295e-7,0.000003486247,0.00013774862],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99855965,0.00024537844,0.00088990264,0.000089742505,0.00010827252,0.00010705344],"domain_scores_gemma":[0.9973208,0.0019481939,0.0003652705,0.00020428917,0.00012640699,0.000035067103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003832745,0.00007321634,0.0005323323,0.000052446336,0.0000141117835,0.0000018852766,0.00007528545,0.00013707888,0.00005317468],"category_scores_gemma":[0.0007071324,0.00003146425,0.0002301486,0.000058402056,0.00041793002,0.00004253759,0.000010888805,0.000113830654,0.0000014846303],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.042000905,0.009998351,0.6746194,0.000057605917,0.0038359598,0.00043535102,0.0013585348,0.0000039817814,0.03754239,0.0014047849,0.00033738345,0.22840537],"study_design_scores_gemma":[0.004546864,0.011410464,0.9773743,0.00016719381,0.00011191764,0.00009144057,0.00019972649,0.000002618679,0.0006721231,0.00019655726,0.0051916665,0.00003509304],"about_ca_topic_score_codex":0.000024825427,"about_ca_topic_score_gemma":0.000101035876,"teacher_disagreement_score":0.30275497,"about_ca_system_score_codex":0.00002389494,"about_ca_system_score_gemma":0.00007752867,"threshold_uncertainty_score":0.15398806},"labels":[],"label_agreement":null},{"id":"W2283380453","doi":"10.1155/2001/201967","title":"An Unusual Example of <i>Asperigillus</i> Species Lung Disease","year":2001,"lang":"en","type":"article","venue":"Canadian Respiratory Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Lung disease; Lung; Disease; Intensive care medicine; Pathology; Internal medicine","score_opus":0.03885799960055558,"score_gpt":0.28839939028520645,"score_spread":0.24954139068465087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2283380453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99070114,0.0015850551,0.00017897107,0.00027434158,0.00017025454,0.0001364598,0.00004492394,0.000014458597,0.006894372],"genre_scores_gemma":[0.99582165,0.00007667033,0.000052247073,0.0024163795,0.0005154062,0.0000016639899,0.000007877294,0.000021746626,0.0010863644],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99854976,0.00008828709,0.00037506304,0.00021946659,0.00033741666,0.0004299946],"domain_scores_gemma":[0.996857,0.00002418857,0.000102170954,0.0004299986,0.0002662041,0.0023204586],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00042864564,0.00014343866,0.00027596756,0.00025160846,0.00023543298,0.000042552118,0.00016457302,0.00007422129,0.0015155269],"category_scores_gemma":[0.00015533796,0.00012659673,0.00014337584,0.00023991065,0.00020280955,0.00020469363,0.000007719161,0.00031597697,0.000017124781],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030061987,0.000072216935,0.97931296,0.000041130374,0.000034273486,0.0019086523,0.00013628264,0.00000978358,0.0070430874,0.00078385905,0.0076311585,0.0027259889],"study_design_scores_gemma":[0.00059113547,0.000183213,0.74722904,0.00007750454,0.000056628924,0.000098561984,0.0002873679,0.00004274549,0.0004231659,0.00008920318,0.2507865,0.00013492633],"about_ca_topic_score_codex":0.0035674034,"about_ca_topic_score_gemma":0.04178183,"teacher_disagreement_score":0.24315536,"about_ca_system_score_codex":0.00037478443,"about_ca_system_score_gemma":0.0025458874,"threshold_uncertainty_score":0.9993972},"labels":[],"label_agreement":null},{"id":"W2284549295","doi":"10.1038/nature16963","title":"Inhibiting fungal multidrug resistance by disrupting an activator–Mediator interaction","year":2016,"lang":"en","type":"article","venue":"Nature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":143,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Biomedical Imaging and Bioengineering; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada","keywords":"Mediator; Activator (genetics); Candida glabrata; Transcription factor; Biology; Gene; Protein subunit; RNA polymerase II; Transcription (linguistics); Gene expression; Cell biology; Genetics; Promoter; Candida albicans","score_opus":0.010279827184100844,"score_gpt":0.3099360025075382,"score_spread":0.29965617532343736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2284549295","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943854,0.0005572663,0.00017272269,0.0021215584,0.0003881012,0.0001885999,0.000051787738,0.00013610795,0.0019984448],"genre_scores_gemma":[0.99463993,0.000038801714,0.00055978104,0.00053784886,0.0005578685,0.000009009747,0.00003163777,0.000030774834,0.0035943317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850816,0.000068326684,0.00025607875,0.00046041422,0.00038741145,0.0003196407],"domain_scores_gemma":[0.99890083,0.00027225487,0.00013203316,0.00033969115,0.00015160338,0.00020358394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003082911,0.00017925422,0.00024174954,0.00004980634,0.0001353461,0.000025408783,0.00009287323,0.00070985156,0.00014416088],"category_scores_gemma":[0.0014192482,0.000116677074,0.000093610055,0.00014833937,0.00007062277,0.0005301167,0.00003118205,0.0014661708,0.00003539717],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010626682,0.00017121928,0.1347156,0.00011245772,0.000028518047,0.000044376557,0.00029917248,5.881683e-8,0.8310563,0.00014631046,0.015968252,0.016395068],"study_design_scores_gemma":[0.004657701,0.0003076622,0.19446227,0.0020599924,0.00010962373,0.0000429049,0.002951427,0.000081783015,0.68185246,0.0001977931,0.112460464,0.0008158979],"about_ca_topic_score_codex":0.000006699968,"about_ca_topic_score_gemma":0.00010483072,"teacher_disagreement_score":0.14920382,"about_ca_system_score_codex":0.00022545163,"about_ca_system_score_gemma":0.000067042296,"threshold_uncertainty_score":0.6369864},"labels":[],"label_agreement":null},{"id":"W2287252202","doi":"10.21007/etd.cghs.2008.0186","title":"Transcriptional Regulation of Azole Antifungal Resistance in Candida albicans","year":2008,"lang":"en","type":"dissertation","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Julius-Maximilians-Universität Würzburg; Université de Montréal","keywords":"Azole; Candida albicans; Microbiology; Ergosterol; Corpus albicans; Antifungal; Biology; Medicine","score_opus":0.015415304832967732,"score_gpt":0.2790224669431776,"score_spread":0.2636071621102099,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2287252202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86129355,0.0015491283,0.000049577782,0.00009694715,0.00018768226,0.00043140346,0.000050688916,0.000027753838,0.13631329],"genre_scores_gemma":[0.8552354,0.00044666536,0.0005645093,0.00004135072,0.0000615981,0.000014571975,0.0015865368,0.000025216947,0.14202414],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99803764,0.000041343847,0.0006844673,0.00041312844,0.000592137,0.00023126058],"domain_scores_gemma":[0.9990874,0.00004722698,0.00018536093,0.0003370037,0.00026152984,0.000081471044],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017086846,0.00022913677,0.0006228524,0.00024161511,0.000050168568,0.000004917571,0.00008515278,0.00034426316,0.0014539046],"category_scores_gemma":[0.00007897342,0.00021428471,0.00021334186,0.00033525168,0.00008844344,0.00008745144,0.000002972048,0.00033570098,0.000011402101],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.019759519,0.0016663804,0.45476335,0.006456346,0.00029966608,0.00017669625,0.006414259,0.000018324996,0.46781498,0.018530836,0.021613734,0.0024859034],"study_design_scores_gemma":[0.0009893127,0.000064031636,0.98728913,0.0006872911,0.00006111519,0.0000031916404,0.00059175637,0.000020624177,0.0072800405,0.0003133111,0.0025163714,0.00018380865],"about_ca_topic_score_codex":0.0004253381,"about_ca_topic_score_gemma":0.035209063,"teacher_disagreement_score":0.5325258,"about_ca_system_score_codex":0.00015442522,"about_ca_system_score_gemma":0.00061418465,"threshold_uncertainty_score":0.9994589},"labels":[],"label_agreement":null},{"id":"W2289132000","doi":"10.1111/myc.12494","title":"Diversity and origins of Indian multi‐triazole resistant strains of <i>Aspergillus fumigatus</i>","year":2016,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Aspergillus fumigatus; Microbiology; Aspergillus; Fungal Diversity; Triazole; Aspergillosis; Biology; Diversity (politics); Chemistry; Ecology; Immunology; Sociology; Anthropology","score_opus":0.029584409851312884,"score_gpt":0.26796121751771895,"score_spread":0.23837680766640607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2289132000","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984765,0.00037722944,0.000064908956,0.00016101818,0.00004286104,0.00016397456,0.00013735463,0.000018030765,0.00055814366],"genre_scores_gemma":[0.9987632,0.00032782202,0.00031602918,0.000051126375,0.000023869452,9.0808413e-7,0.0000025786828,0.0000071330505,0.0005073494],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991492,0.000029854962,0.00023137902,0.00019831395,0.00022378126,0.0001674731],"domain_scores_gemma":[0.9993077,0.00009263544,0.00009777341,0.0002720535,0.00011565518,0.00011417262],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018651261,0.00010034372,0.0003218512,0.000063271815,0.00015980966,0.0000015848439,0.00007541444,0.00007335219,0.00008729025],"category_scores_gemma":[0.0002392491,0.00006429296,0.00008043849,0.00011009157,0.0002985164,0.00006967781,0.00016115006,0.000060357463,0.000003366332],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056969153,0.000200015,0.71542865,0.00026287063,0.000055862478,0.000029401068,0.0011496188,8.788699e-8,0.27869618,0.0008284181,0.00010442081,0.0026747992],"study_design_scores_gemma":[0.0017828356,0.00027998968,0.91319793,0.00024527207,0.000055966364,0.0000027325098,0.00043430895,0.0000012732351,0.0823431,0.000089872985,0.0014825484,0.00008417199],"about_ca_topic_score_codex":0.0005010574,"about_ca_topic_score_gemma":0.0005114612,"teacher_disagreement_score":0.1977693,"about_ca_system_score_codex":0.000072485425,"about_ca_system_score_gemma":0.00007799359,"threshold_uncertainty_score":0.26217908},"labels":[],"label_agreement":null},{"id":"W2291705312","doi":"10.71781/26087","title":"Caractérisation génétique, phénotypique et formation de biofilm des souches de Candida albicans répondant ou non au farnésol","year":2010,"lang":"fr","type":"dissertation","venue":"Papyrus : Institutional Repository (Université de Montréal)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Université Laval","keywords":"Biofilm; Candida albicans; Microbiology; Chemistry; Biology; Bacteria; Genetics","score_opus":0.008047526558720245,"score_gpt":0.21816329010882302,"score_spread":0.21011576355010278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2291705312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9575172,0.005364548,0.014506577,0.00063221145,0.000996558,0.0008747112,0.00016641636,0.00012250162,0.01981926],"genre_scores_gemma":[0.9712784,0.0017846156,0.0023741557,0.0002765676,0.0004594745,0.00006661205,0.0014789123,0.000059324393,0.022221891],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99626684,0.00044450362,0.0006821157,0.0007647682,0.0007841631,0.001057612],"domain_scores_gemma":[0.99697906,0.00031853744,0.0006884793,0.00058300863,0.0006767107,0.00075420743],"candidate_categories":["metaepi_narrow","sts","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0011586141,0.00068328314,0.00068913575,0.00042292982,0.005872489,0.00009675473,0.0003743037,0.0013626495,0.0001167962],"category_scores_gemma":[0.000560625,0.00076595595,0.0005133633,0.00039942752,0.0006608771,0.0009629206,0.000088083165,0.0014888854,0.000072942195],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.003236134,0.0004987303,0.32518,0.0015177492,0.0004183645,0.0013904889,0.14260225,0.0010816025,0.50497395,0.009569478,0.00030490433,0.009226349],"study_design_scores_gemma":[0.0015935376,0.00028438214,0.7627513,0.0013234249,0.00089565106,0.0008669973,0.06237052,0.0073561952,0.15583356,0.00051110383,0.005446538,0.0007668269],"about_ca_topic_score_codex":0.22274108,"about_ca_topic_score_gemma":0.37123895,"teacher_disagreement_score":0.4375713,"about_ca_system_score_codex":0.022445627,"about_ca_system_score_gemma":0.012204361,"threshold_uncertainty_score":0.9999338},"labels":[],"label_agreement":null},{"id":"W2296574497","doi":"10.1038/srep21874","title":"A common mechanism involving the TORC1 pathway can lead to amphotericin B-persistence in biofilm and planktonic Saccharomyces cerevisiae populations","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Institutes of Health; University of Toronto","keywords":"Biofilm; Saccharomyces cerevisiae; Persistence (discontinuity); Mechanism (biology); Amphotericin B; Lead (geology); Microbiology; Biology; Antifungal; Bacteria; Genetics; Yeast","score_opus":0.04489245763775674,"score_gpt":0.27879798469355466,"score_spread":0.23390552705579792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2296574497","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99544775,0.0003787476,0.000094117524,0.002320725,0.0009106692,0.00052738824,0.00000959773,0.000034815883,0.00027615562],"genre_scores_gemma":[0.9976898,0.000016261421,0.0002534762,0.00020591253,0.000031833668,0.000021082426,0.000010414937,0.000010393324,0.0017608171],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981044,0.000065075394,0.0004614961,0.00066470116,0.00037826545,0.000326064],"domain_scores_gemma":[0.9987018,0.00006668012,0.0001434381,0.0008465125,0.000088453744,0.00015308885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013480786,0.00014069256,0.00026803248,0.00014253495,0.00029819508,0.00010797737,0.00010431552,0.00005989582,0.00006876991],"category_scores_gemma":[0.00036352768,0.000077800185,0.00006825066,0.00045493655,0.00022630012,0.000120528945,0.00008211062,0.00010053483,0.000011457944],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042273117,0.000061143146,0.4966397,0.000062217514,0.000010370601,0.0002967336,0.0015740055,0.0000017709083,0.49343288,0.00066912523,0.00094867294,0.0062611173],"study_design_scores_gemma":[0.00052734884,0.00023627776,0.9103174,0.0013234037,0.000059091562,0.000447647,0.0027095,0.00015587894,0.06541082,0.013788964,0.0045825057,0.00044116646],"about_ca_topic_score_codex":0.0004069275,"about_ca_topic_score_gemma":0.005724807,"teacher_disagreement_score":0.42802206,"about_ca_system_score_codex":0.00015598623,"about_ca_system_score_gemma":0.00016432464,"threshold_uncertainty_score":0.31945765},"labels":[],"label_agreement":null},{"id":"W2301057907","doi":"10.1371/journal.pone.0151260","title":"Detection of a Serum Siderophore by LC-MS/MS as a Potential Biomarker of Invasive Aspergillosis","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Health Services; Centre for Drug Research and Development; Simon Fraser University","funders":"Merck Canada; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Galactomannan; Aspergillosis; Aspergillus fumigatus; Biomarker; Immunoassay; Aspergillus; Chromatography; Biology; Internal medicine; Microbiology; Medicine; Gastroenterology; Chemistry; Immunology; Antibody; Biochemistry","score_opus":0.02602057068246259,"score_gpt":0.23645594028521347,"score_spread":0.2104353696027509,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2301057907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99759126,0.0003915922,0.00012689861,0.000570522,0.000028409748,0.00030386768,0.00008995067,0.0000246512,0.00087286334],"genre_scores_gemma":[0.99794173,0.00036345888,0.00012619149,0.000071570146,0.000040910825,0.000010236032,0.000004920316,0.00001849235,0.0014225165],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987059,0.000050395847,0.00033650524,0.0002557633,0.0004627963,0.00018860018],"domain_scores_gemma":[0.99902534,0.00009183904,0.00015300029,0.00034209626,0.00028775807,0.000099975514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001417506,0.00012287291,0.00039993686,0.000078096215,0.000033237146,0.0000029968978,0.000068460824,0.0001263563,0.00073365244],"category_scores_gemma":[0.0005858245,0.0000845394,0.0001391059,0.00017150788,0.00017136036,0.00007545019,0.000036688547,0.00007398341,0.000048158818],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069386075,0.00096938637,0.08562456,0.00032881042,0.00036441238,0.00000947221,0.000063951025,1.8286714e-8,0.9087254,0.0000058840583,0.00013091514,0.0030833206],"study_design_scores_gemma":[0.000946651,0.00054495764,0.22238573,0.0005137477,0.00025400007,0.0000023151392,0.00008463796,0.000008091617,0.7750611,0.00011161383,0.000013131094,0.00007403783],"about_ca_topic_score_codex":0.00018204606,"about_ca_topic_score_gemma":0.00015549068,"teacher_disagreement_score":0.13676116,"about_ca_system_score_codex":0.000060563685,"about_ca_system_score_gemma":0.00008729717,"threshold_uncertainty_score":0.80329794},"labels":[],"label_agreement":null},{"id":"W2310065108","doi":"10.1155/2008/825901","title":"Posaconazole: A New Agent for the Prevention and Management of Severe, Refractory or Invasive Fungal Infections","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Posaconazole; Antifungal; Refractory (planetary science); Broad spectrum; Intensive care medicine; Biology; Medicine; Pharmacology; Microbiology; Voriconazole; Chemistry; Combinatorial chemistry","score_opus":0.01725471627820807,"score_gpt":0.2700809123154805,"score_spread":0.2528261960372724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2310065108","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904365,0.007281852,0.00060752546,0.00091990887,0.0002690188,0.00033885034,0.00004848196,0.0000036625913,0.00009422027],"genre_scores_gemma":[0.98826814,0.010453194,0.000044347817,0.00062026,0.00013321494,0.0000052548753,0.00000780853,0.000006103202,0.00046165477],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993244,0.000042274623,0.00029356475,0.00011049494,0.00005820989,0.00017109468],"domain_scores_gemma":[0.9987774,0.00027434216,0.00013849633,0.00008610579,0.00013224926,0.00059141516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014546461,0.000088118715,0.00025302797,0.00009294717,0.0001672932,0.000005004606,0.0000479268,0.00009304253,0.00022591892],"category_scores_gemma":[0.0005177766,0.000053531712,0.00011373804,0.000077697936,0.00038179764,0.000038343896,0.000013676872,0.00014374596,6.2904104e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013892627,0.00050116394,0.895417,0.0013272755,0.0016658615,0.0010908273,0.00053729763,0.0000051892453,0.0015737775,0.0006654878,0.039267704,0.056559183],"study_design_scores_gemma":[0.0053658606,0.0037668152,0.93545526,0.00089857454,0.0009610852,0.010845296,0.0005480689,0.0000044416356,0.00007802621,0.00038885968,0.04152984,0.00015785036],"about_ca_topic_score_codex":0.00086402753,"about_ca_topic_score_gemma":0.016381787,"teacher_disagreement_score":0.05640133,"about_ca_system_score_codex":0.00007763081,"about_ca_system_score_gemma":0.0026728197,"threshold_uncertainty_score":0.91414213},"labels":[],"label_agreement":null},{"id":"W2312309727","doi":"10.1139/w2012-030","title":"Nitrogen source and growth stage of <i>Candida albicans</i> influence expression level of vacuolar aspartic protease Apr1p and carboxypeptidase Cpy1p","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"University of Texas Health Science Center at San Antonio","keywords":"Candida albicans; Corpus albicans; Vacuole; Biology; Microbiology; Protease; Biochemistry; Carboxypeptidase; Gene expression; Yeast; Enzyme; Gene","score_opus":0.024520958565659313,"score_gpt":0.24535874532495255,"score_spread":0.22083778675929325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2312309727","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956987,0.003640655,0.00010033535,0.00012752895,0.000037884216,0.00019542358,0.00016283561,0.0000016257538,0.000035043577],"genre_scores_gemma":[0.99907655,0.000054076256,0.00046683787,0.00019788567,0.000042046915,0.0000014532991,0.0000044859817,0.0000107148835,0.00014597223],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989599,0.00009414005,0.0004392544,0.0001245702,0.00005760814,0.0003245246],"domain_scores_gemma":[0.9985437,0.000077485514,0.00030861876,0.00015467191,0.00026149905,0.00065403676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046819012,0.00012627109,0.0004480085,0.00015405587,0.00005267504,0.0000044859316,0.000085076696,0.00012309641,0.00007041083],"category_scores_gemma":[0.00040353672,0.00009945376,0.0000652632,0.00008775214,0.00047548034,0.00010940368,0.000020680845,0.0002287295,7.889776e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013928936,0.000020147792,0.48397788,0.00014592435,0.000028354183,0.000018644294,0.0003488492,6.2845066e-7,0.5150531,0.000016011782,0.00013032144,0.00012085339],"study_design_scores_gemma":[0.0023202423,0.0008396249,0.45490095,0.0005843729,0.00018991016,0.0007636042,0.00090256426,0.00000272038,0.5363146,0.00008008299,0.002890557,0.00021076931],"about_ca_topic_score_codex":0.0032591163,"about_ca_topic_score_gemma":0.0021423856,"teacher_disagreement_score":0.029076923,"about_ca_system_score_codex":0.000054614582,"about_ca_system_score_gemma":0.000649128,"threshold_uncertainty_score":0.49268308},"labels":[],"label_agreement":null},{"id":"W2312932649","doi":"10.1089/omi.2015.0185","title":"Systems Biology Approaches for Host–Fungal Interactions: An Expanding Multi-Omics Frontier","year":2016,"lang":"en","type":"review","venue":"OMICS A Journal of Integrative Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Prevention of Organ Failure; St. Paul's Hospital; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Systems biology; Biology; Host (biology); Computational biology; Proteomics; Genomics; Metabolomics; Omics; Modelling biological systems; Fungal pathogen; Pathogen; Bioinformatics; Genome; Ecology; Microbiology; Genetics; Gene","score_opus":0.17253384962967838,"score_gpt":0.42836756436731865,"score_spread":0.25583371473764027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2312932649","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000490479,0.88057166,0.114504084,0.000060297254,0.0024249898,0.0011520283,0.000641826,0.000013352876,0.00014129274],"genre_scores_gemma":[0.0023510763,0.9877934,0.0071366564,0.00004211594,0.0013865079,0.00010176749,0.00025085502,0.00006996009,0.0008676963],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99642664,0.00069519336,0.0017941316,0.00054433104,0.00008817284,0.0004515407],"domain_scores_gemma":[0.9953467,0.0010658049,0.002132285,0.00040903376,0.00080866413,0.00023746102],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012666913,0.0006226756,0.0037957067,0.00055553246,0.00011958268,0.000040195147,0.00041114306,0.0008068728,0.000027626076],"category_scores_gemma":[0.001527048,0.00031445676,0.0013200715,0.00013510026,0.00041426398,0.00017711164,0.000059477938,0.0010747528,0.000011490652],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002234896,0.00083434605,0.0024486575,0.005261721,0.004064799,0.00004011327,0.00063504436,3.2626752e-7,0.0015504934,0.015078922,0.0010103915,0.96684027],"study_design_scores_gemma":[0.0017268318,0.0026682725,0.000032228276,0.012878456,0.0012072821,0.0008766162,0.002090232,0.00013605125,0.00008084514,0.0003144708,0.97749954,0.00048914726],"about_ca_topic_score_codex":0.000013722082,"about_ca_topic_score_gemma":0.000027212609,"teacher_disagreement_score":0.9764892,"about_ca_system_score_codex":0.00077597663,"about_ca_system_score_gemma":0.0009604451,"threshold_uncertainty_score":0.99993074},"labels":[],"label_agreement":null},{"id":"W2314578221","doi":"10.1017/s0317167100010878","title":"Scedosporium Cerebral Abscesses After Extra-Corporeal Membrane Oxygenation","year":2010,"lang":"en","type":"review","venue":"Canadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Montreal General Hospital; Montreal Neurological Institute and Hospital; Ottawa Hospital; McGill University","funders":"","keywords":"Oxygenation; Medicine; Brain abscess; Surgery; Anesthesia; Abscess","score_opus":0.05444903958883715,"score_gpt":0.3174602840463895,"score_spread":0.2630112444575523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2314578221","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.385076,0.60833186,0.000008348973,0.0009738712,0.0018931581,0.00046290125,0.000050253133,0.00002682978,0.003176821],"genre_scores_gemma":[0.26128814,0.7345263,0.0013051041,0.0015300622,0.0011463715,0.000010262209,0.0000035906714,0.000040170027,0.00015001952],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99246836,0.0010202798,0.002078612,0.0010523907,0.0014810679,0.0018993097],"domain_scores_gemma":[0.99254006,0.0007433246,0.0019890575,0.00036946998,0.00092430256,0.0034338087],"candidate_categories":["metaepi_narrow","sts","research_integrity"],"consensus_categories":["sts"],"category_scores_codex":[0.0055410946,0.0008200972,0.0023477145,0.0017592418,0.0020383424,0.00087031326,0.0022933225,0.0009319678,0.0007255975],"category_scores_gemma":[0.0034154162,0.00049750885,0.0012333667,0.0020330178,0.009701105,0.0010597075,0.000080085396,0.004491545,0.000016856246],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005440799,0.00024476027,0.42459938,0.002233187,0.00016197216,0.059879802,0.00036713853,0.00006126595,0.00001395213,0.0011139595,0.001672455,0.509108],"study_design_scores_gemma":[0.00062533625,0.064540304,0.05254341,0.0030254307,0.0012048793,0.12628081,0.00011325727,0.0000780172,0.000018826651,0.00561999,0.7446006,0.001349162],"about_ca_topic_score_codex":0.00065390195,"about_ca_topic_score_gemma":0.07711039,"teacher_disagreement_score":0.7429281,"about_ca_system_score_codex":0.00044509218,"about_ca_system_score_gemma":0.01563183,"threshold_uncertainty_score":0.99974763},"labels":[],"label_agreement":null},{"id":"W2315310246","doi":"10.1139/w2012-013","title":"Standardization and characterization of antigens for the diagnosis of aspergillosis","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Fundação de Amparo à Pesquisa do Estado do Rio Grande do Sul","keywords":"Antigen; Aspergillus fumigatus; Aspergillosis; Microbiology; Aspergillus niger; Aspergillus; Aspergillus flavus; Immunodiffusion; Aspergilloma; Allergic bronchopulmonary aspergillosis; Biology; Chemistry; Immunology; Antibody; Biochemistry; Immunoglobulin E","score_opus":0.01961930154922534,"score_gpt":0.2582311346454677,"score_spread":0.23861183309624237,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2315310246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948996,0.0018859498,0.0020956034,0.00060507515,0.00016396091,0.00013143053,0.00020060781,4.8766435e-7,0.00001731716],"genre_scores_gemma":[0.9991237,0.0004876444,0.00015613054,0.000110625275,0.000073875606,0.0000010662909,0.000017834403,0.000004462101,0.000024670466],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99954134,0.000028530276,0.0002491793,0.00003909686,0.0000220517,0.00011980071],"domain_scores_gemma":[0.9992452,0.00008866041,0.0002014456,0.0000691902,0.00029042843,0.00010503884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034076945,0.00004360047,0.00020547624,0.00007634967,0.000040578172,0.0000018560588,0.00003776301,0.000058755828,0.00006174617],"category_scores_gemma":[0.00019162406,0.000028706565,0.000062708226,0.000058783422,0.00015470228,0.00004273599,0.0000029215619,0.000048070535,1.8031194e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006308348,0.0000108535305,0.6045199,0.00004392362,0.000053606876,4.845716e-7,0.00028918916,4.7615526e-7,0.39319125,0.00009258586,0.00024566898,0.0014889864],"study_design_scores_gemma":[0.00045348296,0.00028087271,0.8459696,0.00008196465,0.00014871584,0.00006420823,0.00019301607,0.0000022728473,0.1303434,0.000010907736,0.02241356,0.000037980775],"about_ca_topic_score_codex":0.00012166349,"about_ca_topic_score_gemma":0.0010090976,"teacher_disagreement_score":0.26284784,"about_ca_system_score_codex":0.000033383196,"about_ca_system_score_gemma":0.0002609686,"threshold_uncertainty_score":0.11706198},"labels":[],"label_agreement":null},{"id":"W2316871165","doi":"10.1016/j.neurol.2015.01.167","title":"Données IRM à long terme des patients sous tériflunomide : résultats de l’extension de l’étude de phase II","year":2015,"lang":"fr","type":"article","venue":"Revue Neurologique","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of British Columbia","funders":"","keywords":"Medicine; Gynecology","score_opus":0.04347610117314461,"score_gpt":0.3027887411840515,"score_spread":0.2593126400109069,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2316871165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9848334,0.0058571254,0.0039829644,0.0027030844,0.00078121264,0.0007593062,0.00006654531,0.00017172367,0.00084463257],"genre_scores_gemma":[0.98789275,0.0036545158,0.0020671866,0.003732179,0.000978764,0.000041248884,0.000045258126,0.00008330019,0.001504778],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9955397,0.0010143075,0.00069014647,0.0008568548,0.00030190666,0.0015970521],"domain_scores_gemma":[0.9968983,0.000507352,0.00025955096,0.00078896404,0.00046244325,0.001083385],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019588333,0.00048778713,0.00072268443,0.00012383315,0.00032278465,0.000052884505,0.0003623591,0.000759051,0.00006622753],"category_scores_gemma":[0.007025159,0.0004778141,0.0002700544,0.00028326793,0.00062477274,0.0002574676,0.00023258422,0.0012047607,0.00010630809],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0041501294,0.0037791638,0.91525346,0.0010380185,0.00007807179,0.004145038,0.004369619,0.00060799764,0.013749736,0.00012911744,0.0047892244,0.04791044],"study_design_scores_gemma":[0.0065244436,0.011736669,0.95948124,0.0009683859,0.00039756953,0.00063057424,0.0002667549,0.0068431306,0.0051870006,0.0024538923,0.004963077,0.00054725586],"about_ca_topic_score_codex":0.00055200944,"about_ca_topic_score_gemma":0.00095566886,"teacher_disagreement_score":0.047363184,"about_ca_system_score_codex":0.00092503807,"about_ca_system_score_gemma":0.0010283326,"threshold_uncertainty_score":0.99976736},"labels":[],"label_agreement":null},{"id":"W2316881094","doi":"10.1155/2001/237384","title":"Gastrointestinal Mucormycosis in a Renal Transplant Patient","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Gastroenterology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto","funders":"","keywords":"Mucormycosis; Medicine; Renal transplant; Pathological; Stomach; Gastrointestinal tract; Disease; Incidence (geometry); Gastrointestinal system; Gastrointestinal disease; Pathophysiology; Kidney; Surgery; Gastroenterology; Pathology; Internal medicine","score_opus":0.01305147456199022,"score_gpt":0.22767150247355675,"score_spread":0.21462002791156654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2316881094","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99671954,0.000091757676,0.00071363756,0.0018062412,0.00010306983,0.00008465008,0.0000101963005,0.0000027078208,0.00046822973],"genre_scores_gemma":[0.997978,0.000024617266,0.00086881476,0.0010019942,0.00007174322,0.0000013518664,0.00000376548,0.000009130162,0.000040608775],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986553,0.00007511537,0.0005205019,0.0001296128,0.00013022305,0.0004892566],"domain_scores_gemma":[0.9989051,0.00002366344,0.00013593906,0.00012559794,0.00013782067,0.0006718644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024270656,0.00011341998,0.00035446716,0.00036630334,0.00003423349,0.000007923078,0.00009758592,0.000034627727,0.00030294358],"category_scores_gemma":[0.00009786509,0.000097389784,0.00013625502,0.00011122499,0.00012931864,0.00006382263,0.0000037284183,0.00037925708,0.0000073874057],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023299376,0.000058749145,0.98309714,0.000008565131,0.000017822342,0.012201975,0.00015447524,0.000014829551,0.0008444848,0.000012055,0.0005680391,0.0006919576],"study_design_scores_gemma":[0.0015593788,0.004636824,0.9573887,0.0003049427,0.00003510296,0.034378666,0.0001398107,0.000028590282,0.00003998047,0.00003718044,0.0014075319,0.000043290198],"about_ca_topic_score_codex":0.0016864331,"about_ca_topic_score_gemma":0.14580967,"teacher_disagreement_score":0.14412323,"about_ca_system_score_codex":0.00021763833,"about_ca_system_score_gemma":0.0005927696,"threshold_uncertainty_score":0.8697771},"labels":[],"label_agreement":null},{"id":"W2321349864","doi":"10.1128/mbio.00252-16","title":"Deacetylation of Fungal Exopolysaccharide Mediates Adhesion and Biofilm Formation","year":2016,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; McGill University Health Centre; Hospital for Sick Children; University of Toronto; McGill University","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Hospital for Sick Children; University of Toronto; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Cystic Fibrosis Canada; Canada Research Chairs; National Institutes of Health; Government of Canada","keywords":"Biofilm; Microbiology; Adhesion; Chemistry; Acetylation; Biology; Bacteria; Biochemistry; Genetics","score_opus":0.018842031526421426,"score_gpt":0.26198392787487984,"score_spread":0.24314189634845843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2321349864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99756503,0.00030471172,0.0008494472,0.0006258652,0.00003925307,0.00012185953,0.000007894615,0.000022292723,0.0004636523],"genre_scores_gemma":[0.9990256,0.00021906813,0.00029523132,0.000045139866,0.000039365736,0.000002449534,0.0000058167816,0.0000045678166,0.00036274886],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994762,0.000016262895,0.00017352728,0.00010553925,0.00013569604,0.00009275374],"domain_scores_gemma":[0.9996342,0.000062029685,0.00006324694,0.00012426567,0.00006457632,0.00005168211],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017077124,0.00005632633,0.00012468395,0.000045107623,0.000027947273,0.0000033090528,0.000021169162,0.000058415837,0.00008939014],"category_scores_gemma":[0.00015543963,0.000033958288,0.00003202879,0.000056382516,0.00006153731,0.00015574173,0.000013786331,0.000030979834,0.000021024689],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015101013,0.00002467633,0.25800738,0.00007423895,0.0000056669537,0.0000012417755,0.000119715,1.1147921e-8,0.7211328,0.00026548188,0.00027151924,0.019946216],"study_design_scores_gemma":[0.0006001262,0.0001417038,0.45891252,0.000116917865,0.000022145985,0.0000048743595,0.00009329127,0.000037709808,0.53948915,0.0003277686,0.00020817276,0.000045628083],"about_ca_topic_score_codex":0.000016185411,"about_ca_topic_score_gemma":0.000025335714,"teacher_disagreement_score":0.20090514,"about_ca_system_score_codex":0.000026321848,"about_ca_system_score_gemma":0.000022009428,"threshold_uncertainty_score":0.13847788},"labels":[],"label_agreement":null},{"id":"W2322886270","doi":"10.1093/mmy/myv026","title":"The use of biomarkers and molecular methods for the earlier diagnosis of invasive aspergillosis in immunocompromised patients","year":2015,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Galactomannan; Aspergillosis; Intensive care medicine; Medicine; Molecular diagnostics; Clinical diagnosis; Diagnostic test; Diagnostic accuracy; Pathology; Immunology; Internal medicine; Bioinformatics; Biology; Pediatrics","score_opus":0.10454597329660718,"score_gpt":0.42685594389456605,"score_spread":0.32230997059795885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2322886270","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004111505,0.9922821,0.00019604195,0.000369921,0.0001969889,0.0027654322,0.000039245188,0.000004136697,0.000034624467],"genre_scores_gemma":[0.00077910133,0.99637663,0.0019241213,0.0001589461,0.000018899433,0.000658751,0.000034115303,0.00002380461,0.000025613985],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970667,0.0010590447,0.00094026385,0.0003117931,0.00035378282,0.0002684617],"domain_scores_gemma":[0.9843402,0.014335647,0.00039348713,0.0004988631,0.0002873706,0.00014446277],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0024019456,0.00022511632,0.0017733529,0.000102060076,0.000048754588,0.0000053710583,0.00028744742,0.0005201533,0.00006120327],"category_scores_gemma":[0.018967213,0.00010710211,0.00037275054,0.00028326412,0.0010332351,0.000019959554,0.00017074842,0.00037091406,9.697876e-7],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028262805,0.00020261965,0.00630945,0.004276594,0.0006005952,0.0000074686723,0.00005672698,2.7219922e-8,0.000007555672,0.00006563825,0.00094568625,0.987245],"study_design_scores_gemma":[0.0017615451,0.00069652335,0.0079680765,0.0036713353,0.001410312,0.0000051459615,0.000050781564,0.00002128287,0.000043630193,0.00010754378,0.9841352,0.00012863411],"about_ca_topic_score_codex":0.00011222923,"about_ca_topic_score_gemma":0.00006958804,"teacher_disagreement_score":0.9871164,"about_ca_system_score_codex":0.000087690096,"about_ca_system_score_gemma":0.00075766357,"threshold_uncertainty_score":0.98929644},"labels":[],"label_agreement":null},{"id":"W2324738862","doi":"10.1099/jmm.0.000226","title":"Inhibition of Candida albicans biofilm formation and modulation of gene expression by probiotic cells and supernatant","year":2016,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Fanshawe College; Western University","funders":"","keywords":"Biofilm; Microbiology; Candida albicans; Hypha; Corpus albicans; Biology; Yeast; Chemistry; Bacteria; Biochemistry","score_opus":0.009181741957158042,"score_gpt":0.24645711781373902,"score_spread":0.23727537585658098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2324738862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941519,0.0007481764,0.0036836916,0.0011881267,0.00006367761,0.0001030188,0.00005061886,0.0000018471214,0.000008951003],"genre_scores_gemma":[0.9978785,0.0013529793,0.0006274638,0.000064843945,0.000039168714,3.539272e-7,0.000011360804,0.000003869369,0.000021479085],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990651,0.000058172318,0.00053854485,0.00009112927,0.00014808988,0.000098991724],"domain_scores_gemma":[0.99924886,0.000101899626,0.00032393084,0.0000709693,0.0001443311,0.000110027984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053832465,0.00006858476,0.0003150741,0.00007530382,0.000016575508,0.0000015815292,0.000038175654,0.00017727753,0.00011358966],"category_scores_gemma":[0.00021763546,0.000037383874,0.00004200557,0.000041133302,0.0002744988,0.00008994405,0.000021229805,0.00010934954,4.202751e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032541837,0.000077407414,0.009398315,0.0001446941,0.000016304099,0.0000064774954,0.00012461974,7.2067735e-8,0.9849022,0.000009454144,0.00077499705,0.00422003],"study_design_scores_gemma":[0.0020831116,0.0006414409,0.00979024,0.0007708806,0.000036406702,0.0003091594,0.000104789375,0.000028003491,0.9858834,0.000054251188,0.00025564234,0.000042632488],"about_ca_topic_score_codex":0.000016990176,"about_ca_topic_score_gemma":0.000007990157,"teacher_disagreement_score":0.0041773976,"about_ca_system_score_codex":0.000033380646,"about_ca_system_score_gemma":0.000081240054,"threshold_uncertainty_score":0.15244702},"labels":[],"label_agreement":null},{"id":"W2328500652","doi":"10.1097/00043426-200203000-00017","title":"Candida dubliniensis Fungemia and Vascular Access Infection","year":2002,"lang":"en","type":"article","venue":"Journal of Pediatric Hematology/Oncology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"","keywords":"Fungemia; Candida dubliniensis; Medicine; Candida albicans; Bloodstream infection; Microbiology; Corpus albicans; Internal medicine; Mycosis; Antifungal; Dermatology; Surgery; Biology","score_opus":0.046358063866437656,"score_gpt":0.3476557713681958,"score_spread":0.30129770750175816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2328500652","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880161,0.0066615753,0.00049310375,0.002187508,0.0006434996,0.00017030671,0.0000016441211,0.000021034439,0.0018051995],"genre_scores_gemma":[0.984151,0.013660135,0.0005464344,0.0005363038,0.0009351087,0.0000034423008,0.0000011872901,0.000014539872,0.00015183791],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99815303,0.00019498909,0.0008227271,0.00023068428,0.00027891062,0.00031962927],"domain_scores_gemma":[0.9980678,0.0003764914,0.0005974824,0.00020415086,0.00044098537,0.00031310652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008693314,0.00016704628,0.00090331765,0.00042389534,0.00009760042,0.00001966984,0.00011195509,0.0004303731,0.00048001023],"category_scores_gemma":[0.00097282516,0.00012941373,0.00023222322,0.00042190164,0.00015058042,0.00025410435,0.00006693583,0.00065978506,0.00003325824],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020048389,0.00042692092,0.96504205,0.00020920548,0.0001592108,0.0007015727,0.0002972098,0.0000027382746,0.00014005568,0.00007936167,0.027806018,0.0049351715],"study_design_scores_gemma":[0.00733644,0.0037931283,0.90614736,0.000054919336,0.0022001367,0.008592561,0.00030939898,0.00030184866,0.00030632733,0.0005161516,0.07007705,0.0003646962],"about_ca_topic_score_codex":0.000031293177,"about_ca_topic_score_gemma":0.00006879561,"teacher_disagreement_score":0.058894712,"about_ca_system_score_codex":0.00021718461,"about_ca_system_score_gemma":0.00030739262,"threshold_uncertainty_score":0.52773386},"labels":[],"label_agreement":null},{"id":"W2330949564","doi":"10.3389/fmicb.2016.00472","title":"Interactions of Aspergillus fumigatus Conidia with Airway Epithelial Cells: A Critical Review","year":2016,"lang":"en","type":"review","venue":"Frontiers in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":143,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Prevention of Organ Failure; Simon Fraser University; St. Paul's Hospital; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Aspergillus fumigatus; Biology; Microbiology; Immunology; Respiratory epithelium; Immune system; Epithelium; Conidium","score_opus":0.024956094908860957,"score_gpt":0.32877926955207515,"score_spread":0.3038231746432142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2330949564","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000016789414,0.99469733,0.001075984,0.00020806666,0.0013364084,0.0010654391,0.0005832569,0.000021008202,0.0009957338],"genre_scores_gemma":[0.000075443764,0.9947065,0.0031963512,0.00024932236,0.00013338438,0.00006911307,0.00016682722,0.000046699697,0.001356347],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973311,0.0004301923,0.0010375207,0.00064834236,0.000077067416,0.0004757726],"domain_scores_gemma":[0.9983776,0.00034935752,0.0003088019,0.00066281535,0.00017739773,0.00012403372],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038700423,0.00043879272,0.0036034859,0.00024250086,0.000035450157,0.0000037079596,0.00023927774,0.00044011523,0.0005529044],"category_scores_gemma":[0.00040749426,0.00026084122,0.0005702984,0.00030808014,0.0009480952,0.000045252425,0.000068186666,0.0007322307,0.00011229817],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041996487,0.00037556686,0.0002634941,0.1307609,0.00061846315,0.00020851419,0.00003964877,1.4609456e-8,0.002093505,0.00015315763,0.076079674,0.7889871],"study_design_scores_gemma":[0.0004031742,0.00028397486,0.000006348773,0.10260815,0.00089706475,0.00022023462,0.000020891754,1.0046438e-7,0.00014028598,0.0000165487,0.89515966,0.00024356844],"about_ca_topic_score_codex":0.000010471458,"about_ca_topic_score_gemma":0.000031110223,"teacher_disagreement_score":0.81908,"about_ca_system_score_codex":0.00030499217,"about_ca_system_score_gemma":0.0007115683,"threshold_uncertainty_score":0.9999844},"labels":[],"label_agreement":null},{"id":"W2333267067","doi":"10.1155/2005/676878","title":"Invasive Aspergillosis in Patients with Chronic Obstructive Pulmonary Diseases","year":2005,"lang":"en","type":"article","venue":"Canadian Respiratory Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; Montreal Clinical Research Institute; Montreal Heart Institute","funders":"Canadian Institutes of Health Research; McGill University","keywords":"Medicine; Antibiotics; Intensive care unit; Aspergillosis; Internal medicine; Intensive care medicine; Immunology","score_opus":0.010705846501406838,"score_gpt":0.2282902308024716,"score_spread":0.21758438430106475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2333267067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995725,0.0016246531,0.0000024541291,0.00032541488,0.00006837478,0.00023761067,0.00004423388,0.000008464506,0.0019638003],"genre_scores_gemma":[0.99775034,0.000027002608,0.000047585836,0.0016322457,0.00035669043,0.0000061669703,0.000009025163,0.000022164872,0.00014876339],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986553,0.00006432059,0.0002768817,0.00023784052,0.00030920596,0.00045644006],"domain_scores_gemma":[0.99838644,0.000032289085,0.000086105814,0.00023178151,0.00022578445,0.0010375909],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010882747,0.00016040177,0.0002530847,0.00032227926,0.00017872507,0.000030715495,0.00010967301,0.000084440064,0.00057918846],"category_scores_gemma":[0.00015201766,0.00012837138,0.00008080063,0.00023993352,0.00013525244,0.00026362797,0.000009667949,0.00043580018,0.000041738545],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025331098,0.000073569114,0.9839811,0.000021830607,0.00003591978,0.00049019675,0.000052731146,0.000022430691,0.00005465644,0.000026147267,0.0005158954,0.014472232],"study_design_scores_gemma":[0.0012793251,0.0003040562,0.98906624,0.00018295762,0.000039724728,0.000024378784,0.00010373888,0.0000042471543,0.0000707624,0.000031135958,0.008744039,0.00014938095],"about_ca_topic_score_codex":0.0009841775,"about_ca_topic_score_gemma":0.17142174,"teacher_disagreement_score":0.17043756,"about_ca_system_score_codex":0.0024857284,"about_ca_system_score_gemma":0.003673493,"threshold_uncertainty_score":0.84369767},"labels":[],"label_agreement":null},{"id":"W2333612493","doi":"10.1097/inf.0000000000000909","title":"Interferon-gamma Immunotherapy in a Patient With Refractory Disseminated Candidiasis","year":2015,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Medicine; Immunotherapy; Neutropenia; Immunology; Adjuvant; Chemotherapy; Immune system; Refractory (planetary science); Interferon gamma; Mycosis; Internal medicine","score_opus":0.011323897253490298,"score_gpt":0.257428363568377,"score_spread":0.2461044663148867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2333612493","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953552,0.0024602732,0.00011613569,0.0003736025,0.00021582659,0.00031373976,0.0000056348727,0.000038772414,0.0011208042],"genre_scores_gemma":[0.99816364,0.0009630268,0.00001685799,0.00025380577,0.00040957856,0.000018045721,0.0000035408013,0.000025771775,0.00014571918],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99852246,0.00017274245,0.00035549645,0.00017955074,0.00044386424,0.00032587675],"domain_scores_gemma":[0.99867404,0.00010343448,0.00018514458,0.00031269324,0.00025285,0.0004718335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048038017,0.00018235568,0.0002589926,0.00019568078,0.00013907837,0.00005919643,0.000102090075,0.00005376033,0.000111294125],"category_scores_gemma":[0.00029929014,0.00010184384,0.00011666798,0.00042713838,0.00007746816,0.00016567293,0.00002415869,0.0005938378,0.000024024883],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005072527,0.0006267398,0.9857143,0.000030295212,0.000055043325,0.0007346916,0.0015265449,0.000043992677,0.000042599422,0.0000050808976,0.0017096335,0.004438512],"study_design_scores_gemma":[0.0046347156,0.0026370676,0.9876983,0.000107715794,0.00034919693,0.0012089036,0.0018532837,0.000086080305,0.000026735075,0.00042669923,0.00068432733,0.00028693918],"about_ca_topic_score_codex":0.00012477326,"about_ca_topic_score_gemma":0.000116517826,"teacher_disagreement_score":0.004151573,"about_ca_system_score_codex":0.00048598013,"about_ca_system_score_gemma":0.00083487475,"threshold_uncertainty_score":0.41530713},"labels":[],"label_agreement":null},{"id":"W2333921405","doi":"10.2144/000113568","title":"Fluorescence method for determining the mechanism and speed of action of surface-active drugs on yeast cells","year":2011,"lang":"en","type":"article","venue":"BioTechniques","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Mechanism of action; Drug action; Drug; Benzalkonium chloride; Saccharomyces cerevisiae; Acriflavine; Antifungal drugs; Antifungal drug; Pharmacology; Chemistry; Yeast; Drug resistance; Antifungal; Microbiology; Biology; Biochemistry; In vitro; Chromatography","score_opus":0.07164730854673415,"score_gpt":0.3432647318473997,"score_spread":0.2716174233006655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2333921405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9712857,0.000016166598,0.0268687,0.00004920328,0.00003763494,0.000713612,0.000034604374,0.000041270432,0.00095313566],"genre_scores_gemma":[0.9076837,0.00006373376,0.092127204,0.000041150248,0.000011276989,0.0000033980082,0.0000013850711,0.000007866528,0.00006030684],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994642,0.000042216714,0.00015530657,0.00014608909,0.00010651654,0.00008568378],"domain_scores_gemma":[0.9994697,0.00009067661,0.000118876895,0.00018769859,0.00010680984,0.000026248501],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035730997,0.00007647223,0.00019297127,0.000025536527,0.000035132885,0.0000024087974,0.000052796153,0.00009673695,0.000009572888],"category_scores_gemma":[0.00006568227,0.000050346694,0.00005947688,0.000050510083,0.00008771952,0.000035306985,0.000018244265,0.000083320425,2.4019576e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006850194,0.000069686175,0.0003476778,0.00011066402,0.000014049459,2.846494e-7,0.00068870524,2.0668692e-8,0.98152834,0.0006349087,0.00006588751,0.015854726],"study_design_scores_gemma":[0.00018090356,0.0006316612,0.010663497,0.0001141105,0.000036964102,5.068461e-7,0.00044652307,0.00012717707,0.98660713,0.0011048124,0.00004090878,0.000045807727],"about_ca_topic_score_codex":0.00012869795,"about_ca_topic_score_gemma":0.000005672968,"teacher_disagreement_score":0.0652585,"about_ca_system_score_codex":0.00001830114,"about_ca_system_score_gemma":0.00002030753,"threshold_uncertainty_score":0.20530786},"labels":[],"label_agreement":null},{"id":"W2334764430","doi":"10.1093/ofid/ofv133.01","title":"Implementation of a Protocol for Posaconazole Prophylaxis in Patients Undergoing Remission-Induction Chemotherapy for Acute Leukemia: From Guidelines to Real-Life","year":2015,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Medicine; Posaconazole; Incidence (geometry); Aspergillosis; Acute leukemia; Induction chemotherapy; Clinical endpoint; Number needed to treat; Internal medicine; Leukemia; Chemotherapy; Surgery; Randomized controlled trial; Confidence interval; Immunology; Antifungal; Relative risk; Amphotericin B; Dermatology","score_opus":0.05064813664171392,"score_gpt":0.42574507121217997,"score_spread":0.37509693457046606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2334764430","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8725692,0.0000050196363,0.0014340526,0.0011274114,0.00007882973,0.12430045,0.0002599549,0.000032448326,0.00019261552],"genre_scores_gemma":[0.91294605,0.0000035631795,0.0012429553,0.00059559394,0.00007560913,0.08470397,0.00024425724,0.000030163512,0.00015786015],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985893,0.000030236384,0.0005601135,0.00035763136,0.00022629807,0.00023642488],"domain_scores_gemma":[0.99850464,0.00006200127,0.00022185748,0.0002583901,0.00071073766,0.00024239792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020809342,0.00015718034,0.0003648438,0.00008946593,0.000092067676,0.000039301776,0.00011141232,0.00007883186,0.000045095243],"category_scores_gemma":[0.0005911952,0.00013192798,0.00010803014,0.00018063144,0.000021566897,0.00027643502,0.000061833576,0.00004722156,0.0000023113996],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0065484303,0.0004373865,0.95444924,0.00015869526,0.00009485225,4.2843678e-7,0.00013378036,0.000015615324,0.0009161283,0.000082660794,0.023523364,0.013639434],"study_design_scores_gemma":[0.040050037,0.008748706,0.928512,0.000525261,0.00019008834,6.1811284e-7,0.002124181,0.0001621863,0.009421625,0.0054891603,0.0044014473,0.00037473915],"about_ca_topic_score_codex":0.001997514,"about_ca_topic_score_gemma":0.002002181,"teacher_disagreement_score":0.040376812,"about_ca_system_score_codex":0.0004747446,"about_ca_system_score_gemma":0.0012642719,"threshold_uncertainty_score":0.5379867},"labels":[],"label_agreement":null},{"id":"W2335136657","doi":"10.1097/md.0000000000002078","title":"Osteoarticular Infections Caused by Non-Aspergillus Filamentous Fungi in Adult and Pediatric Patients","year":2015,"lang":"en","type":"review","venue":"Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"ASTER","funders":"Qatar National Research Fund; Sick Kids Foundation; Qatar Foundation; Fonds National de la Recherche Luxembourg; Gilead Sciences; Astellas Pharma; Astellas Pharma US; Enzon Pharmaceuticals; Pfizer","keywords":"Medicine; Aspergillus; Microbiology","score_opus":0.02167560688070562,"score_gpt":0.31754247465611346,"score_spread":0.2958668677754078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2335136657","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019454114,0.9775235,0.000007994589,0.00009544893,0.00034931718,0.0015364183,0.00005961653,0.000039021303,0.0009345419],"genre_scores_gemma":[0.013791668,0.9837375,0.0000074962504,0.00017188916,0.000406107,0.00009461803,0.00058782974,0.0000519038,0.001150983],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99743617,0.0001204462,0.0008698434,0.0005830763,0.0005861299,0.00040436417],"domain_scores_gemma":[0.99842626,0.00013872125,0.00024025576,0.0005030923,0.00029044133,0.00040121484],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00044232834,0.00044740067,0.0020924637,0.00036015626,0.000056894078,0.000009203353,0.00009289963,0.00034958712,0.00014074634],"category_scores_gemma":[0.0007632803,0.00030672405,0.00014937764,0.0007521716,0.00015479466,0.00005810654,0.00006242179,0.00058921566,0.000070742084],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000654453,0.0010226618,0.1403444,0.03319094,0.00017385276,0.00024204626,0.00062018476,1.2901667e-7,0.000009071666,0.000008258484,0.07087929,0.7534437],"study_design_scores_gemma":[0.005332908,0.0020124856,0.017712846,0.010066374,0.0031784952,0.000016139173,0.000113550996,0.000008359672,6.56196e-7,0.000012760656,0.9610655,0.00047997222],"about_ca_topic_score_codex":0.00015041338,"about_ca_topic_score_gemma":0.00013275581,"teacher_disagreement_score":0.89018613,"about_ca_system_score_codex":0.00035916906,"about_ca_system_score_gemma":0.0002861297,"threshold_uncertainty_score":0.9999385},"labels":[],"label_agreement":null},{"id":"W2335901492","doi":"10.1074/jbc.r116.720995","title":"Biofilm Exopolysaccharides of Pathogenic Fungi: Lessons from Bacteria","year":2016,"lang":"en","type":"review","venue":"Journal of Biological Chemistry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":127,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Fonds de Recherche du Québec - Santé; Cystic Fibrosis Canada","keywords":"Biofilm; Microbiology; Bacteria; Pathogenic bacteria; Biology; Chemistry","score_opus":0.0907968953179893,"score_gpt":0.35952234800839844,"score_spread":0.26872545269040915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2335901492","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03315163,0.9657192,0.000030217194,0.000058742135,0.00013992852,0.0001234146,0.00048043122,0.0000107676515,0.0002856188],"genre_scores_gemma":[0.016937295,0.9813641,0.00043902622,0.000022065138,0.00083226874,0.0000031038037,0.00006326392,0.000020047903,0.00031882798],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99748015,0.000100212055,0.0015105151,0.00034111744,0.00029515542,0.00027285647],"domain_scores_gemma":[0.9969266,0.00049781136,0.0016157355,0.00044861564,0.0002463248,0.00026490437],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00048417307,0.00037604573,0.002903998,0.00004496271,0.00002776058,0.000010930409,0.00038473675,0.00089838007,0.0025708403],"category_scores_gemma":[0.0007637113,0.00018248806,0.0017091816,0.00013215221,0.00027410226,0.00003842541,0.000094828276,0.0006787833,0.000026616786],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025742853,0.00024015979,0.00062953,0.005803715,0.0005468371,0.00021240751,0.000006903218,2.4860045e-9,0.37831175,0.000004312054,0.00038794772,0.613599],"study_design_scores_gemma":[0.001197461,0.0006359556,0.0029440639,0.059573572,0.002463368,0.0007592678,0.00008277372,1.7577585e-7,0.043667514,0.00037025832,0.8876029,0.0007026496],"about_ca_topic_score_codex":0.0000021447975,"about_ca_topic_score_gemma":2.1340387e-7,"teacher_disagreement_score":0.887215,"about_ca_system_score_codex":0.00013662262,"about_ca_system_score_gemma":0.00048021978,"threshold_uncertainty_score":0.99834096},"labels":[],"label_agreement":null},{"id":"W2337206086","doi":"10.1007/s12275-016-6045-4","title":"Recent advances in the understanding of the Aspergillus fumigatus cell wall","year":2016,"lang":"en","type":"review","venue":"The Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Cystic Fibrosis Canada","keywords":"Aspergillus fumigatus; Cell wall; Polysaccharide; Biology; Microbiology; Fungus; Cell; Immune system; Cell biology; Immunology; Biochemistry; Botany","score_opus":0.060639348365824,"score_gpt":0.3321289088812987,"score_spread":0.2714895605154747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2337206086","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00088837347,0.9958387,0.000025378842,0.0011593929,0.0004155816,0.00041309412,0.000024514817,0.0000016377383,0.0012333051],"genre_scores_gemma":[0.008202678,0.991149,0.000009649714,0.00024587807,0.00013703371,0.000001161519,0.0000028467853,0.000014306928,0.0002374096],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99732953,0.0012079392,0.00094651175,0.0001258276,0.00012895028,0.00026125647],"domain_scores_gemma":[0.997172,0.001032814,0.001171224,0.00048372315,0.00010818524,0.000032063443],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023113955,0.0002208694,0.0012458849,0.000084283194,0.00007686068,0.000003877274,0.000726608,0.00022292967,0.00007337995],"category_scores_gemma":[0.00020204128,0.00006563699,0.00051626837,0.0002275087,0.00048068783,0.000035253837,0.00007396694,0.00087857264,0.000013318694],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014914634,0.0005758861,0.0007321809,0.013256363,0.00065411534,0.00010132291,0.0021701006,0.000002581418,0.00989667,0.0009209421,0.009433988,0.9607644],"study_design_scores_gemma":[0.00041184828,0.00023083047,0.000049946793,0.007961323,0.0005097734,0.0007765629,0.0005088154,4.0347146e-8,0.00007956654,0.00029323957,0.9891023,0.00007573506],"about_ca_topic_score_codex":0.0000023313187,"about_ca_topic_score_gemma":0.00006308143,"teacher_disagreement_score":0.9796683,"about_ca_system_score_codex":0.0003439222,"about_ca_system_score_gemma":0.00048004455,"threshold_uncertainty_score":0.381701},"labels":[],"label_agreement":null},{"id":"W2343616226","doi":"10.1128/mbio.00465-16","title":"Deletion of a Yci1 Domain Protein of Candida albicans Allows Homothallic Mating in <i>MTL</i> Heterozygous Cells","year":2016,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute; Concordia University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; National Institute of Dental and Craniofacial Research; Concordia University; Burroughs Wellcome Fund","keywords":"Mating type; Biology; Mating of yeast; Homothallism; Candida albicans; Genetics; Locus (genetics); Mating; Mutant; Corpus albicans; Gene; Microbiology; Cell biology","score_opus":0.008286842529792162,"score_gpt":0.23414261195651195,"score_spread":0.22585576942671978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2343616226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973157,0.000075929944,0.00036559996,0.00029637254,0.000028333543,0.0005022511,0.000027327182,0.000013705356,0.0013747498],"genre_scores_gemma":[0.99753916,0.00001837067,0.0014404933,0.000045477605,0.000024337989,0.00002005675,0.0000037072691,0.000012476311,0.00089590525],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989166,0.000048434315,0.0004098063,0.00020045889,0.00022008669,0.00020456022],"domain_scores_gemma":[0.99939287,0.00005148905,0.00014269707,0.000289063,0.000065085806,0.00005876835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033795642,0.000101305435,0.00033325297,0.000065924956,0.000015827125,0.0000024741385,0.00007274049,0.00008295131,0.00019823066],"category_scores_gemma":[0.000079941514,0.00006961807,0.00008657891,0.00013489251,0.000113833805,0.00004503334,0.000023068165,0.00007610303,0.000013642226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023527515,0.00015727636,0.048524722,0.00025213585,0.000013212304,0.000016740887,0.00026576576,2.8849138e-7,0.946845,0.00010566584,0.00007524944,0.003508659],"study_design_scores_gemma":[0.0034995154,0.00073778164,0.061399374,0.0018534814,0.000032103057,0.000008425875,0.00037292784,0.000020997506,0.93008906,0.00083663047,0.00094895426,0.00020074783],"about_ca_topic_score_codex":0.00065282773,"about_ca_topic_score_gemma":0.0014839463,"teacher_disagreement_score":0.01675595,"about_ca_system_score_codex":0.00007970209,"about_ca_system_score_gemma":0.000078839024,"threshold_uncertainty_score":0.28389424},"labels":[],"label_agreement":null},{"id":"W2361378477","doi":"","title":"Rapid detection and identification of Candida species with ITS universal primers by PCR","year":2003,"lang":"en","type":"article","venue":"Linchuang pifuke zazhi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Air (Canada)","funders":"","keywords":"Biology; Microbiology; Identification (biology); Botany","score_opus":0.011817059264948193,"score_gpt":0.22571316320441073,"score_spread":0.21389610393946254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2361378477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993766,0.0010006394,0.0010909409,0.00008180534,0.00007540884,0.00024241963,0.000014732786,0.000028540773,0.0036994833],"genre_scores_gemma":[0.9937168,0.00024884002,0.00015980098,0.000035536963,0.000023446242,0.000002865407,0.000013568428,0.0000113507695,0.0057878373],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99920833,0.000032185035,0.00019630119,0.00022577049,0.0001981338,0.00013930154],"domain_scores_gemma":[0.9994609,0.00003881184,0.00010795499,0.0001966819,0.0001170998,0.00007856074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019971696,0.000100995414,0.00018783713,0.00006090409,0.00007148948,0.000010926328,0.00003322383,0.00006849751,0.0000818675],"category_scores_gemma":[0.00010539002,0.000083610845,0.00003551098,0.00017965153,0.00012766445,0.00009843492,0.0000071010004,0.000105775616,0.000006997644],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006589159,0.0001399672,0.06887639,0.00023605277,0.00008956917,0.000009877499,0.0006195451,0.0000019215358,0.9227076,0.00092046364,0.0005601571,0.005179539],"study_design_scores_gemma":[0.0016024993,0.00054720725,0.28339645,0.00008663634,0.00016953838,0.000020339263,0.0019201299,0.00009026826,0.6959528,0.000035220644,0.01599029,0.0001886727],"about_ca_topic_score_codex":0.000052041072,"about_ca_topic_score_gemma":0.000115562034,"teacher_disagreement_score":0.22675484,"about_ca_system_score_codex":0.00006447976,"about_ca_system_score_gemma":0.00006994375,"threshold_uncertainty_score":0.3409551},"labels":[],"label_agreement":null},{"id":"W23636710","doi":"10.1001/jamapsychiatry.2013.1098","title":"Function of PHR1 in Candida albicans cell wall assembly","year":2011,"lang":"en","type":"dissertation","venue":"JAMA Psychiatry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Alcohol Abuse and Alcoholism; Canadian Institutes of Health Research; National Institute of General Medical Sciences; National Institute on Drug Abuse; Georgetown University","keywords":"Candida albicans; Cell wall; Virulence; Microbiology; Biology; Corpus albicans; Yeast; Gene; Cell; Biochemistry","score_opus":0.010886598156113442,"score_gpt":0.26411820258743585,"score_spread":0.2532316044313224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W23636710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86075294,0.0019800784,0.000012406013,0.00014538628,0.0017015617,0.00038517595,0.000019521378,0.000027601307,0.1349753],"genre_scores_gemma":[0.96464884,0.00024866476,0.0003077269,0.00036523538,0.00023580788,0.000023448376,0.0007133319,0.00004891131,0.03340801],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982599,0.00004917533,0.0006088058,0.00045171104,0.00035489857,0.0002755046],"domain_scores_gemma":[0.9988373,0.000028440449,0.00034028018,0.00051575387,0.0001661437,0.00011211212],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023318894,0.00027236866,0.00059983146,0.00023962584,0.000033655266,0.000009613632,0.00012683346,0.0006336655,0.00071622466],"category_scores_gemma":[0.000042824722,0.00024989422,0.00025309148,0.00027172116,0.000030929335,0.00008435555,0.00000763762,0.0006609922,0.000058982536],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009831296,0.0015960827,0.94533575,0.005140863,0.00014352515,0.000016039885,0.001350264,5.290371e-7,0.0068057617,0.0008206766,0.019425271,0.009533967],"study_design_scores_gemma":[0.0019918692,0.00045838306,0.98952585,0.0008280704,0.0002712033,0.0000012651448,0.0021012933,0.000007927463,0.0009168583,0.0006997444,0.0029598742,0.00023764068],"about_ca_topic_score_codex":0.0020228054,"about_ca_topic_score_gemma":0.028193882,"teacher_disagreement_score":0.103895895,"about_ca_system_score_codex":0.00007807292,"about_ca_system_score_gemma":0.0007861039,"threshold_uncertainty_score":0.99999535},"labels":[],"label_agreement":null},{"id":"W2372351743","doi":"","title":"Clinical Study of Nosocomial Fungemia in Critical Ill Patients","year":2001,"lang":"en","type":"article","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CAE (Canada)","funders":"","keywords":"Fungemia; Fluconazole; Amphotericin B; Incidence (geometry); Mortality rate; Medicine; Internal medicine; Bacteremia; Concomitant; Mycosis; Intensive care medicine; Microbiology; Antifungal; Surgery; Antibiotics; Biology; Dermatology","score_opus":0.07008881681664009,"score_gpt":0.43530073334535624,"score_spread":0.36521191652871615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2372351743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909569,0.0000151678805,0.000032709202,0.00019531048,0.00012903402,0.00039480586,0.0000016472789,0.00001530505,0.008259101],"genre_scores_gemma":[0.9987969,0.000018866423,0.00013292432,0.00045017732,0.0000720224,0.0000043387945,0.0000027438725,0.0000063113293,0.0005157559],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986582,0.000092830145,0.0005693008,0.00023971722,0.00026677622,0.0001731718],"domain_scores_gemma":[0.99902266,0.0002671644,0.0000297815,0.00026976608,0.0003046272,0.0001060041],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036495863,0.000076831035,0.0003557074,0.000042991225,0.000016390828,0.000002736739,0.00005932856,0.000091287875,0.00045927966],"category_scores_gemma":[0.0019241889,0.000057540896,0.00006876408,0.00015933425,0.000107208456,0.000042193828,0.000035915513,0.0002113664,0.000030025689],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009532583,0.0060889055,0.9886259,0.000021584161,0.0000115958765,0.000039876206,0.000113301154,1.4511016e-7,0.00004600456,0.000041242838,0.0011234791,0.0029347108],"study_design_scores_gemma":[0.003609174,0.0017135624,0.9931669,0.000026481064,0.000027680959,6.4194444e-7,0.0009936345,0.000023587228,0.00002409015,0.000027985277,0.00033111093,0.00005511689],"about_ca_topic_score_codex":0.000115218696,"about_ca_topic_score_gemma":0.0006124047,"teacher_disagreement_score":0.0078399405,"about_ca_system_score_codex":0.000028886992,"about_ca_system_score_gemma":0.000048847316,"threshold_uncertainty_score":0.502879},"labels":[],"label_agreement":null},{"id":"W2393833631","doi":"10.1093/jac/dkw099","title":"Utility of voriconazole therapeutic drug monitoring: a meta-analysis","year":2016,"lang":"en","type":"review","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":196,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Université de Montréal; University Health Network; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Voriconazole; Therapeutic drug monitoring; Medicine; Toxicity; Internal medicine; Pharmacology; Therapeutic index; Clinical endpoint; Drug; Pharmacokinetics; Gastroenterology; Clinical trial","score_opus":0.11874396447283687,"score_gpt":0.3881871290096562,"score_spread":0.2694431645368193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2393833631","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00094394933,0.9971636,0.00043715397,0.0004143565,0.0002668579,0.00044757,0.00008191695,0.000013373976,0.00023123481],"genre_scores_gemma":[0.02152936,0.9755984,0.0006351381,0.00015064137,0.00044607272,0.000002312353,0.0000064400656,0.00006610463,0.0015655229],"study_design_codex":"meta_analysis","study_design_gemma":"not_applicable","domain_scores_codex":[0.99589306,0.00031098886,0.0023514589,0.0004190545,0.00065910857,0.00036632747],"domain_scores_gemma":[0.9950663,0.00033993908,0.0027955284,0.0008427236,0.0007536538,0.00020184465],"candidate_categories":["metaepi_narrow","metaepi_broad","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013418227,0.00060660817,0.008831641,0.00062966265,0.000054457712,0.00002816396,0.0004925161,0.0003691804,0.0013436109],"category_scores_gemma":[0.00006787562,0.00033101786,0.012821186,0.00092298014,0.00023014232,0.00013104093,0.000034040535,0.0006882153,0.000015375832],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010590535,0.0014618302,0.004032017,0.013789003,0.5697607,0.000093823124,0.00022627367,2.711995e-7,0.0017278399,0.00001735297,0.0044459463,0.4033859],"study_design_scores_gemma":[0.0011289088,0.00016770988,0.00091848796,0.0024939086,0.42560396,0.00012858697,0.00002150052,5.0901787e-7,0.0036298144,0.000030846095,0.56548446,0.00039133025],"about_ca_topic_score_codex":0.000011443894,"about_ca_topic_score_gemma":0.000002821304,"teacher_disagreement_score":0.5610385,"about_ca_system_score_codex":0.00010362855,"about_ca_system_score_gemma":0.0008826336,"threshold_uncertainty_score":0.99991417},"labels":[],"label_agreement":null},{"id":"W2397638919","doi":"10.5339/qfarc.2016.hbsp3326","title":"Decision-Analytic Modeling in the Economic Evaluations of Systemic Antifungals for the Prophylaxis against Invasive Fungal Infections – A Thematic Systematic Review","year":2016,"lang":"en","type":"article","venue":"Qatar Foundation Annual Research Conference Proceedings Volume 2016 Issue 1","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"EconLit; Systematic review; Economic evaluation; Data extraction; MEDLINE; Intensive care medicine; Medicine; Pharmacoeconomics; Clinical study design; Clinical trial; Pathology; Biology","score_opus":0.09576956516908619,"score_gpt":0.40848821015256065,"score_spread":0.31271864498347446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397638919","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89140743,0.013807639,0.04074242,0.014627245,0.00037894672,0.036761645,0.0003581183,0.00011441325,0.0018021208],"genre_scores_gemma":[0.98893255,0.007247363,0.00014268969,0.00012044278,0.00010439577,0.0017333269,0.000017728787,0.000026305095,0.0016751892],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.995865,0.0003174261,0.0014000623,0.000571975,0.0013157848,0.0005297686],"domain_scores_gemma":[0.98926467,0.004100574,0.0004929632,0.00079395267,0.005208476,0.00013935078],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.011952598,0.00025390365,0.00088183355,0.00040238706,0.00048142203,0.00017240531,0.0007168236,0.0001299317,0.0003431628],"category_scores_gemma":[0.030665874,0.00012173648,0.00024591785,0.0007193894,0.0004083828,0.00069921056,0.00011350491,0.00039271152,0.00051947514],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019116905,0.001845928,0.03396165,0.7922153,0.0018354777,0.000015895099,0.039107636,0.00023817428,0.02464027,0.026515368,0.037452742,0.04025988],"study_design_scores_gemma":[0.0047058878,0.0034832938,0.0037373318,0.6865625,0.0021737535,0.00016712537,0.086793736,0.19852893,0.00062952336,0.011391501,0.0007246468,0.0011017884],"about_ca_topic_score_codex":0.00012703823,"about_ca_topic_score_gemma":0.00023408534,"teacher_disagreement_score":0.19829075,"about_ca_system_score_codex":0.0006533696,"about_ca_system_score_gemma":0.0021083062,"threshold_uncertainty_score":0.97749925},"labels":[],"label_agreement":null},{"id":"W239879591","doi":"10.1093/pch/18.3.134","title":"Does the use of oral nonabsorbable antifungal prophylaxis reduce the incidence of fungal colonization and/or systemic infection in preterm infants?","year":2013,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Incidence (geometry); Medicine; Antifungal; Colonization; Candida infections; Antifungal drugs; Gynecology; Intensive care medicine; Biology; Microbiology; Dermatology","score_opus":0.023127444728587576,"score_gpt":0.2850759305924098,"score_spread":0.26194848586382224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W239879591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951134,0.0010328052,0.00013209993,0.001387094,0.000195826,0.002073134,0.000020976086,0.000018288296,0.000026424179],"genre_scores_gemma":[0.9948042,0.004428261,0.00021000669,0.0003108275,0.00010011741,0.000041491447,0.0000088703455,0.000013852493,0.00008235358],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99804485,0.000307183,0.0007113737,0.00027108338,0.00038272826,0.0002828118],"domain_scores_gemma":[0.9983128,0.00041846815,0.00046564924,0.0004084084,0.00030770278,0.000087009306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010987803,0.00014382495,0.0004105691,0.00012913872,0.00017718077,0.000027521264,0.00010700084,0.00011631981,0.00002252188],"category_scores_gemma":[0.0012057223,0.000063433436,0.000059769423,0.0007868347,0.00019359954,0.000270225,0.00006776154,0.00038610143,0.0000028602067],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029346038,0.00011114953,0.99331224,0.0011322872,0.000011890169,0.0000012299578,0.0010546703,0.000042008192,0.00026313323,0.00008289537,0.00026526165,0.003429777],"study_design_scores_gemma":[0.000512202,0.00060475804,0.9969455,0.00033304485,0.000028492766,0.0000233723,0.00016524357,0.0009652606,0.00023081836,0.000037182726,0.00008017525,0.00007392791],"about_ca_topic_score_codex":0.0054616076,"about_ca_topic_score_gemma":0.0016774635,"teacher_disagreement_score":0.003784144,"about_ca_system_score_codex":0.00012322671,"about_ca_system_score_gemma":0.00048546205,"threshold_uncertainty_score":0.8256353},"labels":[],"label_agreement":null},{"id":"W2404081995","doi":"10.2460/javma.245.10.1107","title":"Pathology in Practice","year":2014,"lang":"en","type":"article","venue":"Journal of the American Veterinary Medical Association","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Pathology; Medicine","score_opus":0.01496887451414685,"score_gpt":0.3358568029616889,"score_spread":0.32088792844754205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404081995","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97206527,0.000048355065,0.00023268917,0.025900166,0.00026326472,0.000049247297,3.909811e-7,0.000004195221,0.001436392],"genre_scores_gemma":[0.9933539,0.00014609564,0.00059231475,0.0054150256,0.00030216918,8.243024e-7,2.451018e-7,0.0000054153265,0.00018403472],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978248,0.00067178963,0.0004111893,0.00007924733,0.0008648192,0.00014814067],"domain_scores_gemma":[0.9978959,0.0007589426,0.0009025035,0.00014076718,0.00020376935,0.000098124685],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0033644715,0.000059088004,0.00032376774,0.000049139344,0.000028888691,0.000005198233,0.000137139,0.00006733736,0.00003967393],"category_scores_gemma":[0.017278818,0.000036325127,0.00012752318,0.0002354266,0.000097308206,0.0000881389,0.000040239298,0.000552402,0.000010233445],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020419047,0.0006022669,0.9107567,0.000030293786,0.000101939084,0.0006333437,0.00036910575,0.0000039474485,0.007544979,0.000094886556,0.0039770245,0.07384358],"study_design_scores_gemma":[0.0007739536,0.0017108594,0.96772355,0.00009664271,0.000055778946,0.00090806175,0.00028660413,0.00011534959,0.000040292893,0.00008491251,0.02816138,0.000042616124],"about_ca_topic_score_codex":0.00001890379,"about_ca_topic_score_gemma":0.0000071672384,"teacher_disagreement_score":0.073800966,"about_ca_system_score_codex":0.00032255406,"about_ca_system_score_gemma":0.00016810052,"threshold_uncertainty_score":0.99099904},"labels":[],"label_agreement":null},{"id":"W2409866044","doi":"10.1503/cmaj.141412","title":"Chronic necrotizing pulmonary aspergillosis in a patient with diabetes and marijuana use","year":2015,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Alberta; Alberta Health Services","funders":"","keywords":"Medicine; Emergency department; Aspergillosis; Chest pain; Diabetes mellitus; Pulmonary aspergillosis; Intensive care medicine; Surgery; Pediatrics; Psychiatry; Immunology","score_opus":0.011914937805873722,"score_gpt":0.22250568262893008,"score_spread":0.21059074482305637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409866044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880908,0.00073414796,0.0000067646665,0.009787339,0.000099791614,0.000121723766,0.000005748482,0.0000073848155,0.0011462746],"genre_scores_gemma":[0.9965344,0.00008125042,0.000102551174,0.0027827774,0.00029325046,0.0000040558357,0.000005849751,0.000010999777,0.00018488744],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981911,0.00010260384,0.00027693706,0.00015340287,0.00086621003,0.00040972978],"domain_scores_gemma":[0.9976838,0.00010363373,0.00009557398,0.00008358389,0.00025425456,0.0017791531],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008723726,0.00009807522,0.00023421101,0.00014654895,0.00008945017,0.0000596319,0.00004044154,0.00018676023,0.00024643072],"category_scores_gemma":[0.0017316225,0.00007632043,0.000036871137,0.00021312459,0.00005055154,0.00018551094,0.000011698769,0.00063985167,0.000011997852],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024535184,0.000022277329,0.969452,0.000012547286,0.00003609987,0.0018315656,0.00021480565,0.000001924594,0.000020043806,0.000015163152,0.002684404,0.025684627],"study_design_scores_gemma":[0.0011406214,0.0003062965,0.9733832,0.00032823192,0.00003110232,0.00036759238,0.00082536275,0.00063699146,0.0000144048245,0.00005184779,0.02278759,0.00012676556],"about_ca_topic_score_codex":0.002448903,"about_ca_topic_score_gemma":0.08101488,"teacher_disagreement_score":0.07856598,"about_ca_system_score_codex":0.0021082938,"about_ca_system_score_gemma":0.003319574,"threshold_uncertainty_score":0.9357542},"labels":[],"label_agreement":null},{"id":"W2410657374","doi":"10.1097/mph.0000000000000351","title":"Brain Abscesses Due to Aspergillus nidulans Infection During Induction Chemotherapy for Acute Lymphoblastic Leukemia","year":2015,"lang":"en","type":"article","venue":"Journal of Pediatric Hematology/Oncology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia; BC Children's Hospital","funders":"","keywords":"Medicine; Induction chemotherapy; Aspergillus nidulans; Caspofungin; Aspergillosis; Voriconazole; Chemotherapy; Acute leukemia; Lymphoblastic Leukemia; Aspergillus; Leukemia; Chronic granulomatous disease; Antifungal; Immunology; Internal medicine; Dermatology; Microbiology","score_opus":0.02665745765018933,"score_gpt":0.34347721575861134,"score_spread":0.316819758108422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410657374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98305494,0.00039580755,0.008543874,0.0059352666,0.0013023829,0.0004305362,0.0000052531086,0.000036390542,0.00029557294],"genre_scores_gemma":[0.99304664,0.00035332394,0.0030501655,0.00086378463,0.0022654713,0.000022210597,0.000005046942,0.000031783547,0.00036154717],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980015,0.0001298076,0.00089176954,0.0002764431,0.000299159,0.00040130902],"domain_scores_gemma":[0.99758095,0.00034477081,0.00061413314,0.00020157156,0.0008073826,0.00045121775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010092424,0.00021190525,0.0009973703,0.0004929537,0.00009970763,0.000013256359,0.00012549227,0.00045482398,0.00004342754],"category_scores_gemma":[0.0017330991,0.00017373955,0.00023713523,0.00046334421,0.0000761884,0.00018868811,0.000032459775,0.00038033948,0.00003283494],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.033226296,0.0027086209,0.646602,0.0016906925,0.0020851684,0.004894818,0.0062569096,0.0005941342,0.047492098,0.0007221926,0.23362617,0.020100955],"study_design_scores_gemma":[0.05387676,0.032813624,0.7227454,0.00026592377,0.0046607708,0.06499874,0.0031373722,0.00037873266,0.029086629,0.0040404745,0.08254235,0.0014532157],"about_ca_topic_score_codex":0.000026981232,"about_ca_topic_score_gemma":0.000080913494,"teacher_disagreement_score":0.15108381,"about_ca_system_score_codex":0.0016434712,"about_ca_system_score_gemma":0.0023109554,"threshold_uncertainty_score":0.70848936},"labels":[],"label_agreement":null},{"id":"W2410684010","doi":"","title":"[Comparison of two different methods for the investigation of in vitro susceptibilities of planktonic and biofilm forming Candida species to antifungal agents].","year":2010,"lang":"en","type":"article","venue":"PubMed","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Candida krusei; Biofilm; Candida parapsilosis; Microbiology; Candida albicans; Candida tropicalis; Fluconazole; Minimum inhibitory concentration; Nystatin; Amphotericin B; Broth microdilution; Flucytosine; Itraconazole; Corpus albicans; Biology; Antifungal; Chemistry; Antimicrobial; Bacteria","score_opus":0.06999924733595556,"score_gpt":0.37076791470006293,"score_spread":0.30076866736410734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410684010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99699247,0.00021921551,0.00091838196,0.00021175285,0.00014025017,0.001331819,0.000045301884,0.0000061165338,0.00013472074],"genre_scores_gemma":[0.99540657,0.000017282402,0.0041470653,0.00002727092,0.000037061633,0.00017282237,0.000011955741,0.00000864031,0.0001713247],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988412,0.00006138409,0.0005117307,0.0001865194,0.00017078192,0.00022834375],"domain_scores_gemma":[0.9986397,0.0007030569,0.00018139473,0.00028357754,0.000106566695,0.00008570316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010155254,0.00011132035,0.00050619344,0.00012337403,0.00003411179,0.000006144264,0.00009436369,0.000059617596,0.000012516766],"category_scores_gemma":[0.00077852316,0.000073111696,0.000085504464,0.0001496823,0.00029261975,0.00005117878,0.000044758508,0.00014504223,5.74847e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005103169,0.000051052026,0.60038334,0.00030658583,0.000025169044,1.081194e-7,0.0010319209,0.000001111448,0.3726657,0.000268453,0.000025965826,0.024730278],"study_design_scores_gemma":[0.0004905289,0.00005855328,0.5691923,0.000021773147,0.000039463266,4.251154e-7,0.0006858826,0.00020403221,0.42898083,0.00023448793,0.000054793007,0.000036958998],"about_ca_topic_score_codex":0.00025710475,"about_ca_topic_score_gemma":0.0015697662,"teacher_disagreement_score":0.056315113,"about_ca_system_score_codex":0.00003304204,"about_ca_system_score_gemma":0.000047625217,"threshold_uncertainty_score":0.29814085},"labels":[],"label_agreement":null},{"id":"W2413529471","doi":"10.1007/978-1-61779-539-8_8","title":"Targeted Gene Deletion in Aspergillus fumigatus Using the Hygromycin-Resistance Split-Marker Approach","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Transformation (genetics); Homologous recombination; Hygromycin B; Marker gene; Gene; Genetics; Recombination; Mutant; Aspergillus fumigatus; Protoplast; Microbiology","score_opus":0.041566021061032465,"score_gpt":0.3984604710146541,"score_spread":0.35689444995362163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413529471","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5333397,0.005928588,0.45862216,0.000115930554,0.00013590636,0.0003435683,0.0000028261413,0.000014600989,0.0014967476],"genre_scores_gemma":[0.5066489,0.000045494322,0.4927654,0.00034124966,0.00005163923,0.000022001832,0.000019409174,0.000016111908,0.00008977932],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99638987,0.0019742798,0.00045630676,0.00042383795,0.00013156736,0.00062412524],"domain_scores_gemma":[0.9989629,0.00020133515,0.00009725924,0.0005778086,0.00006158403,0.00009912621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034960203,0.00021349914,0.00047827323,0.00014511324,0.000060730268,0.0000067968767,0.0001586167,0.00029762433,0.00004872258],"category_scores_gemma":[0.0008769154,0.00015179116,0.00013293474,0.0005455584,0.00025812013,0.00004459264,0.00007926817,0.00046530314,0.0000036135018],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026535662,0.00015844485,0.1755321,0.000050094983,0.000031235526,0.000019605195,0.0001835136,0.000028115426,0.8185894,0.0023384045,0.000008965879,0.002794764],"study_design_scores_gemma":[0.0023063796,0.00013737357,0.7724797,0.000110834866,0.00014491196,0.00007637801,0.00061998726,0.0037732183,0.21040545,0.0039817984,0.0053409054,0.0006230509],"about_ca_topic_score_codex":0.00010085188,"about_ca_topic_score_gemma":0.000045272696,"teacher_disagreement_score":0.6081839,"about_ca_system_score_codex":0.00020643293,"about_ca_system_score_gemma":0.00007484984,"threshold_uncertainty_score":0.61898637},"labels":[],"label_agreement":null},{"id":"W2414301442","doi":"10.1099/jmmcr.0.005048","title":"Angioinvasive mucormycosis and paradoxical stroke: a case report","year":2016,"lang":"en","type":"article","venue":"JMM Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; McGill University","funders":"","keywords":"Deferiprone; Medicine; Deferasirox; Malignancy; Transesophageal echocardiogram; Deferoxamine; Zygomycosis; Stroke (engine); Immunosuppression; Amphotericin B; Surgery; Thalassemia; Pediatrics; Dermatology; Internal medicine; Antifungal","score_opus":0.018265679119126643,"score_gpt":0.2881628882438661,"score_spread":0.26989720912473947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414301442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950883,0.00046382705,0.00035164415,0.0007841798,0.0001473706,0.00038058468,0.000018903735,0.00008553925,0.0026796802],"genre_scores_gemma":[0.9937919,0.00006657044,0.00051702576,0.0001477809,0.0001603456,0.000026018643,0.00000632438,0.00002177317,0.005262268],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9980885,0.000036898662,0.00061825325,0.0006312423,0.000302533,0.0003226021],"domain_scores_gemma":[0.9982023,0.00016126655,0.0002342335,0.00081673946,0.00017082224,0.00041459253],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005368074,0.00019091764,0.00040730508,0.00007192588,0.00012699103,0.000018526434,0.00001209119,0.0001452803,0.00020230186],"category_scores_gemma":[0.0011669269,0.00011862647,0.00018060228,0.000104353065,0.0001857608,0.00012575177,0.000050899725,0.0001300236,0.0000122927395],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009146187,0.000091871,0.14108784,0.000051270683,0.00005596987,0.8466996,0.00006523257,1.793521e-8,0.0040042764,0.000022766568,0.0016924929,0.0061372034],"study_design_scores_gemma":[0.00044192115,0.00016643592,0.01639366,0.00010085612,0.00015835118,0.97536623,0.00028600084,0.0000041959347,0.0033763298,0.0000964491,0.0034495452,0.0001600319],"about_ca_topic_score_codex":0.00018735029,"about_ca_topic_score_gemma":0.00027471554,"teacher_disagreement_score":0.12866664,"about_ca_system_score_codex":0.000095902455,"about_ca_system_score_gemma":0.00019462577,"threshold_uncertainty_score":0.4837447},"labels":[],"label_agreement":null},{"id":"W2415229727","doi":"","title":"Predictive value of Candida colonization index in 131 patients undergoing two different cardiovascular surgical procedures.","year":2001,"lang":"en","type":"article","venue":"PubMed","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Heart Institute","funders":"","keywords":"Medicine; Extracorporeal circulation; Perioperative; Artery; Antibiotics; Diabetes mellitus; Surgery; Incidence (geometry); Candida albicans; Myocardial infarction; Internal medicine; Derivation; Microbiology; Endocrinology","score_opus":0.011392803663901135,"score_gpt":0.23137719609144636,"score_spread":0.21998439242754522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415229727","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960606,0.00042594818,0.00023920664,0.00005270321,0.000080311096,0.0012691688,0.000006757622,0.000023570441,0.0018417373],"genre_scores_gemma":[0.99920726,0.00022016549,0.0000062464196,0.000028246406,0.000060349936,0.00026240325,0.000033651133,0.000013449924,0.00016822664],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99856997,0.00006407945,0.00030500998,0.00027492942,0.000484746,0.0003012934],"domain_scores_gemma":[0.99936223,0.00007584544,0.000069133464,0.00023014712,0.00014043496,0.00012220962],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027113393,0.00012062388,0.00039127888,0.00009821151,0.000031692754,0.000006694975,0.00005715052,0.00008355946,0.0000104816145],"category_scores_gemma":[0.00048112453,0.00009838631,0.00014496656,0.00030036664,0.00006904771,0.00006852109,0.000031732612,0.00013973824,8.435817e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008499908,0.00036238367,0.9931725,0.00014623656,0.00012606899,0.000034242938,0.00012306306,0.0002688836,0.0000028232598,0.000054225016,0.000027538961,0.004832017],"study_design_scores_gemma":[0.004498235,0.00007744833,0.9944438,0.000078036996,0.00008400799,0.0000048167994,0.00006413097,0.00032960743,0.00013879915,0.000082419145,0.00011660661,0.00008210096],"about_ca_topic_score_codex":0.00019749679,"about_ca_topic_score_gemma":0.00083131593,"teacher_disagreement_score":0.004749916,"about_ca_system_score_codex":0.0002932792,"about_ca_system_score_gemma":0.00011822278,"threshold_uncertainty_score":0.4012077},"labels":[],"label_agreement":null},{"id":"W2415657445","doi":"10.1080/21505594.2016.1196300","title":"Combinatorial strategies for combating invasive fungal infections","year":2016,"lang":"en","type":"review","venue":"Virulence","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":213,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Antifungal; Antifungal drug; Biology; Drug; Antifungal drugs; Drug resistance; Candida auris; Fungal pathogen; Pathogen; Intensive care medicine; Pharmacology; Microbiology; Medicine","score_opus":0.06712246147575954,"score_gpt":0.38376622209203737,"score_spread":0.31664376061627786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415657445","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013123256,0.99128073,0.0008244767,0.000023565588,0.0011234642,0.001642266,0.00020732942,0.00010358209,0.0046633636],"genre_scores_gemma":[0.0021823552,0.9961042,0.000095043455,0.000038135393,0.0007242803,0.000285465,0.00005428288,0.000043910426,0.00047235884],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982804,0.00009180629,0.00054839795,0.00048799874,0.00024128935,0.0003501157],"domain_scores_gemma":[0.997769,0.0011182111,0.000292746,0.00047504198,0.00021416284,0.00013085802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003239409,0.0003429876,0.0013201755,0.000107944514,0.00020515102,0.000055245582,0.00016958725,0.00033523864,0.00010633625],"category_scores_gemma":[0.00095589756,0.00023074416,0.00057865836,0.00020724183,0.00018282385,0.00016972046,0.00005706637,0.00034786196,0.00016542837],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007859198,0.0004414312,0.00067917473,0.05126228,0.00032169404,0.000034380213,0.00008417415,6.1168954e-8,0.000035742596,0.052982897,0.0027537004,0.8913259],"study_design_scores_gemma":[0.0006445282,0.0006731246,0.000032815416,0.03560638,0.0006374946,0.00003070592,0.00008475315,8.9943114e-7,0.000010456063,0.004155938,0.957785,0.00033791145],"about_ca_topic_score_codex":0.00001534026,"about_ca_topic_score_gemma":0.000029051245,"teacher_disagreement_score":0.9550313,"about_ca_system_score_codex":0.00018576162,"about_ca_system_score_gemma":0.0018747433,"threshold_uncertainty_score":0.9409474},"labels":[],"label_agreement":null},{"id":"W2417117125","doi":"10.4049/jimmunol.1501204","title":"IL-27 Induced by Select <i>Candida</i> spp. via TLR7/NOD2 Signaling and IFN-β Production Inhibits Fungal Clearance","year":2016,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; Directorate for Biological Sciences; Versus Arthritis; Exzellenzclusters Entzündungsforschung; Deutsche Forschungsgemeinschaft; University of Aberdeen; National Cancer Institute; National Institutes of Health; Cancer Research UK; Wellcome Trust","keywords":"TLR7; Microbiology; NOD2; Biology; Immunology; Immune system; Innate immune system; Toll-like receptor","score_opus":0.01112100072408172,"score_gpt":0.24262387760291454,"score_spread":0.2315028768788328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417117125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98826504,0.005215908,0.00052794075,0.0053530233,0.0003636027,0.00016247468,0.0000026178623,0.000014852509,0.000094541225],"genre_scores_gemma":[0.9967516,0.0019448037,0.0000616355,0.00024026023,0.0002503455,8.900445e-7,4.9758813e-7,0.000016832475,0.0007331552],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986393,0.00024810975,0.00045600423,0.00015970245,0.00021897191,0.00027789874],"domain_scores_gemma":[0.9989209,0.00016141108,0.0003477784,0.00023200958,0.00027322263,0.00006467492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011011872,0.00014415784,0.00037596576,0.000073181145,0.00012795052,0.000008254454,0.00012606887,0.0001289847,0.000059838247],"category_scores_gemma":[0.000322366,0.000074972864,0.000073446914,0.00015688154,0.00026260538,0.00017584945,0.000028420067,0.00049202435,0.000025709061],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032470657,0.00007228081,0.006161495,0.000019072757,0.00013458406,0.000008582717,0.00030606406,3.9319966e-7,0.9741876,0.000008189859,0.001764288,0.014090365],"study_design_scores_gemma":[0.00229653,0.002079637,0.07381043,0.0003973594,0.00018724643,0.0017572083,0.00033173512,0.0000029818975,0.9158058,0.00039834483,0.0027711305,0.00016161412],"about_ca_topic_score_codex":0.000019248206,"about_ca_topic_score_gemma":0.000014028513,"teacher_disagreement_score":0.06764893,"about_ca_system_score_codex":0.00008794253,"about_ca_system_score_gemma":0.00010970427,"threshold_uncertainty_score":0.30573046},"labels":[],"label_agreement":null},{"id":"W2419225051","doi":"","title":"Acute isolated appendicitis due to Aspergillus carneus in a neutropenic child with acute myeloid leukemia.","year":2016,"lang":"en","type":"article","venue":"PubMed","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"","keywords":"Medicine; Aspergillosis; Voriconazole; Fluconazole; Neutropenia; Appendix; Appendicitis; Aspergillus; Internal medicine; Abdominal pain; Amphotericin B; Mycosis; Gastroenterology; Surgery; Chemotherapy; Immunology; Dermatology; Microbiology; Biology; Antifungal","score_opus":0.008861111747654912,"score_gpt":0.21995138801353403,"score_spread":0.21109027626587912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419225051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9811669,0.00014868153,0.00034739828,0.00480338,0.00011606986,0.001872251,0.00006714615,0.00011821781,0.011359979],"genre_scores_gemma":[0.99118245,0.00020555715,0.00009460657,0.001270436,0.00011324956,0.0006995425,0.000019056348,0.000050060153,0.0063650254],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9976271,0.00005882995,0.00037756478,0.00067357096,0.0003818569,0.0008811184],"domain_scores_gemma":[0.99862885,0.000054491295,0.00007958724,0.00065894995,0.00009159648,0.0004865122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002403683,0.00028491276,0.00061527704,0.00020659673,0.00008235248,0.000026606413,0.000223726,0.00014476952,0.00011231459],"category_scores_gemma":[0.0000936113,0.00017171455,0.000111014895,0.00058248395,0.00012256677,0.00019055324,0.000094073795,0.00028810883,0.00016581609],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.028863614,0.00061861373,0.260179,0.000160619,0.0021606255,0.023056932,0.0010504916,0.000010311521,0.023740679,0.00065312436,0.006387484,0.6531185],"study_design_scores_gemma":[0.0041605774,0.0003600437,0.98674893,0.00016939286,0.00020998232,0.0006960071,0.000051712923,0.0000074062045,0.003484244,0.000024441146,0.0037837415,0.0003035044],"about_ca_topic_score_codex":0.00023359849,"about_ca_topic_score_gemma":0.0012854182,"teacher_disagreement_score":0.72656995,"about_ca_system_score_codex":0.0006665748,"about_ca_system_score_gemma":0.0001814022,"threshold_uncertainty_score":0.7002316},"labels":[],"label_agreement":null},{"id":"W2422752012","doi":"","title":"The relationship of myceliated colonies of Candida albicans with denture stomatitis: an in vivo/in vitro study.","year":2007,"lang":"en","type":"article","venue":"PubMed","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Stomatitis; Dentures; Candida albicans; Corpus albicans; Dentistry; Medicine; Microbiology; Biology; Dermatology","score_opus":0.021908052348311332,"score_gpt":0.27260267928296106,"score_spread":0.2506946269346497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2422752012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976186,0.00019795437,0.0000075609114,0.00012848653,0.000024105499,0.0010891779,0.000008960768,0.0000099696945,0.000915177],"genre_scores_gemma":[0.99953806,0.000013468662,0.00004105708,0.000023847417,0.000010476873,0.00011451363,0.0000037164612,0.0000072626926,0.00024757884],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99897164,0.000061909814,0.00033794783,0.00013652032,0.0002622762,0.00022972835],"domain_scores_gemma":[0.9991519,0.00034166253,0.00010797875,0.00025186272,0.00008380827,0.000062776184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011402403,0.000073471696,0.00022870686,0.00009371079,0.00003621024,0.000004742061,0.000077621335,0.00005169417,0.0000062136296],"category_scores_gemma":[0.00040509293,0.00004685213,0.000023349301,0.000422488,0.0001299128,0.000057028774,0.000010147793,0.0001532146,2.0696321e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025101632,0.00036361898,0.9930157,0.000040226736,0.000021075119,0.000023720238,0.0014818078,0.0000033960785,0.0008035691,0.000058067613,0.000018642959,0.0016599897],"study_design_scores_gemma":[0.0013664952,0.00015949464,0.98847616,0.00003263077,0.000027362095,0.0000015896888,0.0059510944,0.000007952766,0.0038628676,0.000045439996,0.000024231538,0.000044681292],"about_ca_topic_score_codex":0.001494611,"about_ca_topic_score_gemma":0.104829535,"teacher_disagreement_score":0.103334926,"about_ca_system_score_codex":0.00009267728,"about_ca_system_score_gemma":0.000069845584,"threshold_uncertainty_score":0.911505},"labels":[],"label_agreement":null},{"id":"W2436658791","doi":"10.1128/jcm.00578-16","title":"Low Utility of Pediatric Isolator Blood Culture System for Detection of Fungemia in Children: a 10-Year Review","year":2016,"lang":"en","type":"review","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Fungemia; Blood culture; Malassezia; Dimorphic fungus; Medicine; Microbiology; Pediatrics; Biology; Clinical microbiology; Mycosis; Internal medicine; Yeast; Surgery; Antibiotics","score_opus":0.04725334780634643,"score_gpt":0.3998902628330765,"score_spread":0.35263691502673006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2436658791","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007398658,0.9903377,0.00009008975,0.000023634271,0.00045985339,0.0013725025,0.00028739328,0.0000052945825,0.00002483607],"genre_scores_gemma":[0.015167403,0.9834658,0.00017965204,0.00003724267,0.0009937603,0.000008502828,0.00002465324,0.000023274806,0.000099694895],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.9927169,0.00085402775,0.0056766514,0.0003873653,0.00010433846,0.00026068374],"domain_scores_gemma":[0.99222463,0.0010840658,0.0052756164,0.00046323755,0.0008115696,0.00014088076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00443331,0.00031748047,0.006384284,0.00018721535,0.000017192142,0.0000019056257,0.00030375193,0.0011716551,0.00008882774],"category_scores_gemma":[0.004287396,0.00017576564,0.0028094917,0.00029433976,0.00019854179,0.000038996874,0.000052909345,0.0009670052,0.000010808623],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030242836,0.002136723,0.03648879,0.520587,0.0024603729,0.000022320191,0.000012746987,1.3687323e-8,0.0015423389,0.000009659319,0.005710441,0.4280053],"study_design_scores_gemma":[0.009846869,0.009006729,0.009549904,0.34036124,0.0217722,0.0018068854,0.000023550338,3.3551188e-7,0.00038950855,0.000018805265,0.6066013,0.0006226847],"about_ca_topic_score_codex":0.0000011975958,"about_ca_topic_score_gemma":0.0000036907109,"teacher_disagreement_score":0.6008909,"about_ca_system_score_codex":0.00006569651,"about_ca_system_score_gemma":0.00091295777,"threshold_uncertainty_score":0.9036877},"labels":[],"label_agreement":null},{"id":"W2460642928","doi":"10.1139/cjm-2016-0055","title":"<i>ERG11</i> mutations and upregulation in clinical itraconazole-resistant isolates of <i>Candida krusei</i>","year":2016,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Candida krusei; Fluconazole; Microbiology; Biology; Itraconazole; Point mutation; Candida glabrata; Gene; Broth microdilution; Drug resistance; Antifungal; Genetics; Antibiotics; Minimum inhibitory concentration; Mutation","score_opus":0.01608819231422012,"score_gpt":0.27694175292063045,"score_spread":0.26085356060641035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2460642928","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99641436,0.0012620676,0.00009337055,0.0017660807,0.00015157467,0.0000873311,0.00006297234,0.0000015476588,0.00016069385],"genre_scores_gemma":[0.99907213,0.00013457958,0.00025241103,0.00029539454,0.000056950037,4.486791e-7,0.0000047960275,0.0000065536415,0.0001767579],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99885845,0.00007640739,0.00072291517,0.000121991034,0.000026801828,0.00019344827],"domain_scores_gemma":[0.99895877,0.00023706249,0.00024605537,0.00011401392,0.00018906656,0.0002550486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005351572,0.00007947149,0.0003702636,0.00017799252,0.000030349182,0.000003717325,0.0000640813,0.00013603504,0.000095397794],"category_scores_gemma":[0.00035015715,0.000053549044,0.000096177435,0.00008908665,0.00042586535,0.00006367742,0.000005728346,0.00014953745,0.000003020506],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031194155,0.00002711083,0.6037451,0.000023023107,0.000038617996,0.000051838182,0.00010837519,7.806569e-7,0.39129865,0.00025589322,0.00072433345,0.003414295],"study_design_scores_gemma":[0.0028085364,0.0006829777,0.9776097,0.00040545608,0.000072047354,0.00033500593,0.00019020276,0.000002789373,0.008704672,0.00061202503,0.00847004,0.00010658385],"about_ca_topic_score_codex":0.0006562275,"about_ca_topic_score_gemma":0.03428999,"teacher_disagreement_score":0.382594,"about_ca_system_score_codex":0.00008230083,"about_ca_system_score_gemma":0.0009976313,"threshold_uncertainty_score":0.9833317},"labels":[],"label_agreement":null},{"id":"W2463937655","doi":"10.1007/978-1-61779-539-8_3","title":"Rapid Detection of Aneuploidy Following the Generation of Mutants in Candida albicans","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Wellcome Trust","keywords":"Candida albicans; Aneuploidy; Mutant; Biology; Multiplex; Genetics; Karyotype; Multiplex polymerase chain reaction; Chromosome; Gene; Polymerase chain reaction","score_opus":0.05268184288987667,"score_gpt":0.4112131443617132,"score_spread":0.35853130147183654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2463937655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7705313,0.001483343,0.22748077,0.000042510623,0.00013437153,0.00016565535,0.0000012471776,0.0000027824753,0.00015804339],"genre_scores_gemma":[0.9447383,0.000047119396,0.05507379,0.00008427517,0.000025749106,0.000010744696,0.000004051474,0.0000059987838,0.000009929268],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99843466,0.00089298974,0.00030669925,0.00012949611,0.00006446402,0.00017167997],"domain_scores_gemma":[0.9995029,0.00014429426,0.000077788405,0.00022291699,0.000027155462,0.000024920286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020494673,0.00006953918,0.0002736184,0.00009753618,0.000014011224,7.222817e-7,0.000053327425,0.00011536243,0.000017246535],"category_scores_gemma":[0.0007639386,0.000048717626,0.000083248546,0.0002587338,0.000088134686,0.000019229848,0.000019410643,0.0001339171,3.0227432e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005061216,0.000047947753,0.17348932,0.00001716963,0.000014828425,0.000002540606,0.00022262594,0.0000031553047,0.8000369,0.00009588181,3.6884217e-7,0.026018616],"study_design_scores_gemma":[0.00038766567,0.00014073773,0.12137315,0.000017306455,0.000026480391,0.0000038407193,0.0001466535,0.00026403947,0.87731797,0.00019017958,0.00008912513,0.000042871252],"about_ca_topic_score_codex":0.0003089546,"about_ca_topic_score_gemma":0.00030670484,"teacher_disagreement_score":0.17420706,"about_ca_system_score_codex":0.00004127398,"about_ca_system_score_gemma":0.000035520454,"threshold_uncertainty_score":0.19866472},"labels":[],"label_agreement":null},{"id":"W2471236952","doi":"10.1128/aac.02365-17","title":"Chemogenomic Profiling of the Fungal Pathogen Candida albicans","year":2017,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Canadian Institutes of Health Research","keywords":"Anidulafungin; Caspofungin; Candida albicans; Biology; Echinocandins; Antifungal drug; Fluconazole; Microbiology; Drug resistance; Corpus albicans; Posaconazole; Drug; Gene; Computational biology; Voriconazole; Genetics; Pharmacology; Antifungal","score_opus":0.017661123791207784,"score_gpt":0.27830432477954953,"score_spread":0.26064320098834176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2471236952","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99462795,0.000033930068,0.000016711632,0.0028141397,0.00011739604,0.000328884,0.000041461626,0.000010043012,0.002009473],"genre_scores_gemma":[0.9953443,0.00036834,0.00024947943,0.0024916132,0.000105016836,0.0000020853681,0.0000056916874,0.00001823129,0.0014152699],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992244,0.000014822925,0.00020108966,0.0002380356,0.00012261748,0.0001990024],"domain_scores_gemma":[0.9991181,0.0000087357585,0.000168938,0.00058461935,0.000055401335,0.00006419225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013121757,0.00013296088,0.00027011606,0.000015813115,0.00034298943,0.000035916983,0.0002035293,0.000078809026,0.00012568236],"category_scores_gemma":[0.000027462811,0.00008634853,0.00014080768,0.000031167976,0.00029938229,0.000053870917,0.00006375179,0.00011543897,0.0000032809194],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018589568,0.00008034604,0.69359905,0.00007647621,0.000054837306,0.0000047826816,0.00016582067,1.2844716e-7,0.3008137,0.00003839772,0.0014949177,0.0034856189],"study_design_scores_gemma":[0.0012608201,0.00004562348,0.83726233,0.00008855013,0.000043481807,0.00001603546,0.000041249874,0.000019716359,0.15654786,0.000029172583,0.004548983,0.00009616979],"about_ca_topic_score_codex":0.00016329988,"about_ca_topic_score_gemma":0.000053169777,"teacher_disagreement_score":0.14426585,"about_ca_system_score_codex":0.00002313581,"about_ca_system_score_gemma":0.00008965847,"threshold_uncertainty_score":0.3521191},"labels":[],"label_agreement":null},{"id":"W24797660","doi":"10.1007/7355_2014_60","title":"The Evolution of a Glycoconjugate Vaccine for Candida albicans","year":2014,"lang":"en","type":"book-chapter","venue":"Topics in medicinal chemistry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Alberta Glycomics Centre","funders":"","keywords":"Toxoid; Immunogen; Mannan; Candida albicans; Monoclonal antibody; Antigen; Glycoconjugate; Microbiology; Antibody; Clostridium tetani; Biology; Virology; Immunology; Tetanus; Immunization; Biochemistry; Vaccination; Polysaccharide","score_opus":0.011737410950562766,"score_gpt":0.26910812814051666,"score_spread":0.2573707171899539,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W24797660","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.029366756,0.008759415,0.0016564218,0.004313028,0.00042756004,0.0014066144,0.00007656382,0.000045189365,0.95394844],"genre_scores_gemma":[0.33886585,0.000495572,0.00011027978,0.00012984763,0.0011574012,0.000028711673,0.000066335255,0.000032636242,0.65911335],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985501,0.000007227129,0.00055337325,0.0003022581,0.00035289564,0.00023415039],"domain_scores_gemma":[0.9986956,0.00022133926,0.00023636382,0.0005479208,0.00019957962,0.00009919151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005016271,0.00021964234,0.00058649795,0.000028008306,0.00006136828,0.00000407659,0.00017398687,0.00034760174,0.00024715715],"category_scores_gemma":[0.000419267,0.00015388281,0.00017411371,0.000027939606,0.00020413207,0.000008620635,0.00003247553,0.00050709903,0.000002693444],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.026242727,0.00058061397,0.0828136,0.055255443,0.0021467602,0.00049006025,0.0016175235,0.0000132044115,0.067330204,0.4819892,0.08630167,0.19521897],"study_design_scores_gemma":[0.006049905,0.00078675273,0.0071409927,0.0047862045,0.00080703484,0.0000750331,0.00045026024,0.00024609547,0.0064678057,0.048357423,0.92420155,0.0006309383],"about_ca_topic_score_codex":0.00008949925,"about_ca_topic_score_gemma":0.00028914833,"teacher_disagreement_score":0.83789986,"about_ca_system_score_codex":0.00039772937,"about_ca_system_score_gemma":0.00039937062,"threshold_uncertainty_score":0.62751585},"labels":[],"label_agreement":null},{"id":"W2480735601","doi":"10.1128/aac.00732-16","title":"The <i>RTA3</i> Gene, Encoding a Putative Lipid Translocase, Influences the Susceptibility of Candida albicans to Fluconazole","year":2016,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Candida albicans; Translocase; Biology; Gene; Azole; ATP-binding cassette transporter; Fluconazole; Corpus albicans; Gene product; Molecular biology; Microbiology; Transporter; Genetics; Gene expression; Chromosomal translocation; Antifungal","score_opus":0.014556740975923759,"score_gpt":0.278254674624689,"score_spread":0.26369793364876526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2480735601","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98272794,0.00007090545,0.0003063489,0.015751138,0.0000861326,0.00053643086,0.00007035632,0.000017500022,0.00043322513],"genre_scores_gemma":[0.9902657,0.0014803972,0.00013363594,0.0071505127,0.00009734324,0.000010050117,0.0000030845206,0.000016014601,0.00084323966],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987149,0.000053293064,0.0003557605,0.00034202257,0.00021054319,0.00032346466],"domain_scores_gemma":[0.999058,0.00022360063,0.00009850731,0.0003639427,0.00013456753,0.00012137061],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041037495,0.00018701931,0.00030607806,0.000026851269,0.00030703854,0.000032445838,0.00018782831,0.00006681808,0.0001354308],"category_scores_gemma":[0.000060074726,0.00008147696,0.00013787272,0.0001823559,0.0005589929,0.00007573547,0.000028661814,0.00009907635,0.000007249386],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013801721,0.00016321313,0.30617687,0.000061010163,0.00017468414,0.0000063089924,0.0025619054,0.00000126748,0.6373859,0.000119761266,0.008241594,0.043727305],"study_design_scores_gemma":[0.0025448506,0.00042495102,0.64840704,0.00020781555,0.00007906888,0.000018513,0.0007614881,0.000010821046,0.30176187,0.00015274517,0.045375004,0.00025582992],"about_ca_topic_score_codex":0.00029795186,"about_ca_topic_score_gemma":0.00065562315,"teacher_disagreement_score":0.34223017,"about_ca_system_score_codex":0.000036601145,"about_ca_system_score_gemma":0.000110881396,"threshold_uncertainty_score":0.3322534},"labels":[],"label_agreement":null},{"id":"W2489283315","doi":"10.1093/mmy/myw052","title":"(1,3) β-D-Glucan in Bronchoalveolar Lavage of Lung Transplant Recipients for the Diagnosis of Invasive Pulmonary Aspergillosis","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; University Health Network; University of Alberta","funders":"Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Bronchoalveolar lavage; Medicine; Lung transplantation; Galactomannan; Aspergillosis; Lung; Transplantation; Internal medicine; Gastroenterology; Pathology; Immunology","score_opus":0.01853701727889445,"score_gpt":0.29622720289681176,"score_spread":0.2776901856179173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2489283315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916461,0.00095056265,0.0003738925,0.0056613134,0.00021520852,0.00064205524,0.00008127457,0.000008616736,0.00042097503],"genre_scores_gemma":[0.9961248,0.0029336591,0.000070480404,0.0004310068,0.00007067823,0.00017000432,0.000009499783,0.000012005744,0.00017789032],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99836916,0.00013127596,0.0005409325,0.00026575924,0.00039275468,0.00030012385],"domain_scores_gemma":[0.99554366,0.0037886568,0.00011476906,0.00030304448,0.00010408442,0.00014578878],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00084050844,0.00011858415,0.0005253196,0.000090939735,0.000032516364,8.0548335e-7,0.00022407962,0.00024880777,0.0010891416],"category_scores_gemma":[0.003061046,0.0000612443,0.00017159447,0.00014409257,0.000529025,0.000034319946,0.00003795966,0.00016829578,0.000004050961],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00102858,0.00045284186,0.97394705,0.00022968178,0.000086772125,0.000052652857,0.00025422638,1.3188847e-7,0.010620345,0.0002521017,0.0010451115,0.012030533],"study_design_scores_gemma":[0.0018060021,0.000530634,0.97951037,0.000717421,0.00012866493,0.000010464365,0.00008438365,0.000032883185,0.01589837,0.00020321933,0.0010060961,0.00007150774],"about_ca_topic_score_codex":0.00017113304,"about_ca_topic_score_gemma":0.00093331654,"teacher_disagreement_score":0.011959025,"about_ca_system_score_codex":0.00007917019,"about_ca_system_score_gemma":0.00027056978,"threshold_uncertainty_score":0.999824},"labels":[],"label_agreement":null},{"id":"W2497381937","doi":"10.1007/978-3-319-27790-5_8","title":"8 The Cell Wall Polysaccharides of Aspergillus fumigatus","year":2016,"lang":"en","type":"book-chapter","venue":"Biochemistry and Molecular Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Aspergillus fumigatus; Cell wall; Polysaccharide; Microbiology; Cell; Organism; Aspergillus; Biology; Cell biology; Biochemistry; Genetics","score_opus":0.007470649852282067,"score_gpt":0.24691805772881584,"score_spread":0.23944740787653376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2497381937","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1575544,0.07057926,0.00029845888,0.0017772982,0.00027723933,0.0004979387,0.00021938748,0.00004812714,0.76874787],"genre_scores_gemma":[0.7251258,0.003236969,0.00006834207,0.00020841355,0.00008443947,0.0000036670972,0.000039601855,0.00002197779,0.27121082],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990255,0.000012221241,0.00027760465,0.00038024518,0.000094362,0.00021003047],"domain_scores_gemma":[0.99904877,0.000071917486,0.0001584561,0.0005058283,0.00010632638,0.00010872858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011929095,0.00023423204,0.00037928866,0.000019184543,0.00006251946,0.0000046579357,0.00012030769,0.0005575481,0.000086314925],"category_scores_gemma":[0.000068066554,0.00013686434,0.00019219227,0.000010405908,0.0006924901,0.000004822625,0.0000822801,0.00020359956,0.000009554439],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021107442,0.000013912738,0.00019367384,0.00020328321,0.00010582857,0.00003144518,0.0000055470496,2.0724502e-9,0.98077834,0.013928692,0.00031180822,0.004216395],"study_design_scores_gemma":[0.00044330297,0.00020672588,0.000070770984,0.00019121786,0.00014912822,0.000030380214,0.000010251169,2.7214222e-7,0.8950715,0.0066502704,0.096970655,0.00020554043],"about_ca_topic_score_codex":0.0000044053113,"about_ca_topic_score_gemma":0.0000017183561,"teacher_disagreement_score":0.56757134,"about_ca_system_score_codex":0.000026382728,"about_ca_system_score_gemma":0.00015258757,"threshold_uncertainty_score":0.55811656},"labels":[],"label_agreement":null},{"id":"W2507086359","doi":"10.17925/usrpd.2016.01.01.19","title":"Case Report—Aspergillus Empyema Necessitans Post Double-lung Transplant","year":2016,"lang":"en","type":"article","venue":"touchREVIEWS in Respiratory & Pulmonary Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Empyema; Medicine; Parapneumonic effusion; Cystic fibrosis; Streptococcus pneumoniae; Pleural effusion; Lung; Surgery; Microbiology; Pleural fluid; Internal medicine; Antibiotics; Biology","score_opus":0.03565197958898197,"score_gpt":0.3182779664834098,"score_spread":0.2826259868944278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2507086359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92004526,0.0737396,0.000062527935,0.0007625262,0.00021356058,0.0013721631,0.0002813314,0.00015588515,0.003367175],"genre_scores_gemma":[0.9936103,0.0029252167,0.000042408934,0.0015070373,0.0003140539,0.00018832441,0.000058303132,0.000060272447,0.0012940853],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9960996,0.00026961867,0.0013771531,0.0010243314,0.00056179403,0.0006675292],"domain_scores_gemma":[0.9972399,0.00022292194,0.00027852444,0.0014191635,0.00020944096,0.0006300341],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00062770577,0.0004929532,0.0010444039,0.00021878265,0.00018483184,0.000027326352,0.00024222504,0.00017660859,0.0013782345],"category_scores_gemma":[0.00033885788,0.00031346324,0.00053114415,0.00044891442,0.0003101083,0.0004273577,0.000064838954,0.00024818728,0.00015498437],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013342444,0.0007136321,0.5831348,0.0012004805,0.000047742797,0.36445782,0.000054457232,6.191896e-7,0.0043643736,0.00011351464,0.0012607798,0.043317564],"study_design_scores_gemma":[0.0043690545,0.0005109793,0.86180854,0.0055049034,0.0008824909,0.029045686,0.0002594662,0.000019647734,0.00081347773,0.00012053542,0.095464155,0.0012010757],"about_ca_topic_score_codex":0.00007492643,"about_ca_topic_score_gemma":0.00021397043,"teacher_disagreement_score":0.3354121,"about_ca_system_score_codex":0.00028825033,"about_ca_system_score_gemma":0.0004951197,"threshold_uncertainty_score":0.99993175},"labels":[],"label_agreement":null},{"id":"W2510638355","doi":"10.1093/mmy/myw064","title":"High frequency of pathogenic<i>Aspergillus</i>species among nonsporulating moulds from respiratory tract samples","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Centre Hospitalier de l’Université de Montréal; Institut National de Santé Publique du Québec","funders":"","keywords":"Microbiology; Biology; Aspergillus; Aspergillus fumigatus; Pathogenic bacteria; Respiratory tract; Aspergillus flavus; Schizophyllum commune; Respiratory system; Bacteria; Genetics; Botany","score_opus":0.02727842797031881,"score_gpt":0.2750077031827009,"score_spread":0.24772927521238208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2510638355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951991,0.00062653574,0.0010085437,0.0011870204,0.00034009916,0.00021785851,0.00013991173,0.00006903431,0.0012119],"genre_scores_gemma":[0.9971696,0.00012156016,0.0010796577,0.0007847157,0.00044790434,0.000017325694,0.000029505649,0.000023804325,0.00032591954],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99740833,0.00021526872,0.0007814092,0.0004805285,0.0006861985,0.00042825798],"domain_scores_gemma":[0.9973427,0.0013914998,0.00021213964,0.00052450167,0.00016014544,0.000368997],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007223045,0.00020227085,0.0007510916,0.00009380053,0.00007484292,0.0000033622646,0.00022379492,0.0005234487,0.010430849],"category_scores_gemma":[0.004735787,0.00012653993,0.00019624081,0.00016727403,0.0010614104,0.000082479615,0.000074228585,0.00033930986,0.000052513624],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011375032,0.00019411118,0.7355946,0.00003069705,0.0000475527,0.00019078837,0.000076420074,1.1635807e-7,0.25687528,0.0011357659,0.00039597927,0.0053449674],"study_design_scores_gemma":[0.0016688451,0.00032193225,0.98886925,0.00023201545,0.0000760504,0.000007143696,0.00012293812,0.000003117896,0.005621531,0.0015673673,0.0013709642,0.00013883351],"about_ca_topic_score_codex":0.0005083275,"about_ca_topic_score_gemma":0.00078387815,"teacher_disagreement_score":0.25327468,"about_ca_system_score_codex":0.00011104337,"about_ca_system_score_gemma":0.0003913396,"threshold_uncertainty_score":0.99047375},"labels":[],"label_agreement":null},{"id":"W2512902752","doi":"10.1093/mmy/myw077","title":"<i>Aspergillus</i>arthritis: analysis of clinical manifestations, diagnosis, and treatment of 31 reported cases","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Qatar National Research Fund; Astellas Pharma; Sick Kids Foundation; Qatar Foundation; Gilead Sciences","keywords":"Medicine; Aspergillosis; Surgery; Arthritis; Internal medicine; Itraconazole; Gastroenterology; Dermatology; Antifungal; Immunology","score_opus":0.07098487749293951,"score_gpt":0.40508913517064105,"score_spread":0.3341042576777015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2512902752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951189,0.0018814761,0.000098025426,0.0021698112,0.00009817727,0.00020913943,0.00005825059,0.000015404123,0.00035077968],"genre_scores_gemma":[0.9782179,0.020984624,0.0002017473,0.0002007059,0.00006157639,0.00003223161,0.000028764425,0.000005485444,0.0002669566],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979781,0.00016508011,0.0010725448,0.0003116778,0.00030612512,0.00016651022],"domain_scores_gemma":[0.9965364,0.0024815816,0.00025546405,0.0003163588,0.00015229151,0.0002579138],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00059195084,0.00010109516,0.0009984666,0.00014121266,0.000024988953,9.75406e-7,0.000043923832,0.00021918865,0.001548111],"category_scores_gemma":[0.0056857574,0.00005898444,0.00023956058,0.0002704306,0.0007483526,0.00002356374,0.000023000508,0.000059802634,0.00000388318],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003268619,0.0009254355,0.90182066,0.00002369252,0.0009696647,0.0012157685,0.000048517257,4.8150092e-8,0.0003190302,0.0002014595,0.0007018716,0.09344701],"study_design_scores_gemma":[0.0021846339,0.0022092923,0.98831815,0.00010659881,0.001370929,0.00012130061,0.00007931586,0.000018978417,0.0004918322,0.000048512476,0.004993986,0.00005650324],"about_ca_topic_score_codex":0.0002235621,"about_ca_topic_score_gemma":0.0014507838,"teacher_disagreement_score":0.0933905,"about_ca_system_score_codex":0.00003193757,"about_ca_system_score_gemma":0.00029538185,"threshold_uncertainty_score":0.9993646},"labels":[],"label_agreement":null},{"id":"W2514042525","doi":"10.1111/myc.12552","title":"Economic evaluation of azoles as primary prophylaxis for the prevention of invasive fungal infections in Spanish patients undergoing allogeneic haematopoietic stem cell transplant","year":2016,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; CancerCare Manitoba","funders":"Pfizer","keywords":"Medicine; Stem cell; Haematopoiesis; Secondary prophylaxis; Transplantation; Intensive care medicine; Antifungal; Curative treatment; Hematopoietic stem cell transplantation; Internal medicine; Biology; Disease; Dermatology","score_opus":0.02614081757088536,"score_gpt":0.27756076583065026,"score_spread":0.2514199482597649,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2514042525","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99740374,0.00040718509,0.00037256145,0.00004915426,0.000080547754,0.0013550668,0.000048151145,0.000007196286,0.00027638604],"genre_scores_gemma":[0.999379,0.00032914797,0.00003737758,0.000012982484,0.0000177109,0.00008934373,0.000016201266,0.00000970671,0.00010856908],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990292,0.00010306066,0.00036331487,0.00017079544,0.00021694764,0.000116646006],"domain_scores_gemma":[0.9988619,0.00058502425,0.00017456448,0.00019345112,0.00016051401,0.00002452025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005340901,0.00008731771,0.00022498153,0.00006655744,0.00004215404,0.0000037506354,0.00005763316,0.000059413713,0.000047913294],"category_scores_gemma":[0.00010980986,0.000053377524,0.00011447321,0.000056860845,0.000068613685,0.00008785032,0.000012237722,0.00004169508,0.000005571941],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043103716,0.0005033873,0.92878073,0.00097300916,0.000059722704,4.911392e-7,0.00050419994,0.00007146201,0.053865667,0.00010340273,0.000026990325,0.014679901],"study_design_scores_gemma":[0.0030333214,0.0013294998,0.8472626,0.0007125604,0.00026323277,0.000002438916,0.00034145947,0.000035454766,0.14602812,0.0008978654,0.000012841147,0.0000805734],"about_ca_topic_score_codex":0.0000403876,"about_ca_topic_score_gemma":0.0015759853,"teacher_disagreement_score":0.092162445,"about_ca_system_score_codex":0.00019397942,"about_ca_system_score_gemma":0.0005485364,"threshold_uncertainty_score":0.21766722},"labels":[],"label_agreement":null},{"id":"W2515429879","doi":"10.1093/cid/ciw592","title":"Galactomannan, β-D-Glucan, and Polymerase Chain Reaction–Based Assays for the Diagnosis of Invasive Fungal Disease in Pediatric Cancer and Hematopoietic Stem Cell Transplantation: A Systematic Review and Meta-Analysis","year":2016,"lang":"en","type":"review","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":162,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Clinical Evaluative Sciences; Hospital for Sick Children; McMaster University; Pediatric Oncology Group","funders":"National Institute for Health and Care Research","keywords":"Galactomannan; Medicine; Hematopoietic stem cell transplantation; Immunosuppression; Polymerase chain reaction; Neutropenia; Aspergillosis; Transplantation; Internal medicine; Disease; Cancer; Gold standard (test); Oncology; Immunology; Biology; Chemotherapy","score_opus":0.09426626400913617,"score_gpt":0.399042515581612,"score_spread":0.30477625157247584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2515429879","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0019918312,0.99027777,0.000054268192,0.0004136476,0.000045888308,0.0054242,0.0017597515,0.000026989139,0.0000056679496],"genre_scores_gemma":[0.078144826,0.91712517,0.0000017629459,0.00043445767,0.00007020521,0.004017735,0.000060663635,0.00003649611,0.00010867984],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99578154,0.0008774309,0.001972475,0.00080198265,0.00030364058,0.00026294566],"domain_scores_gemma":[0.9857162,0.011816827,0.0011359556,0.00064197025,0.00020310475,0.00048592148],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011069168,0.0005140574,0.006185221,0.0002719841,0.000117934884,0.000033428038,0.0001080399,0.0002077985,0.00005743278],"category_scores_gemma":[0.0012431339,0.00027120952,0.0023196095,0.00061898417,0.0003148907,0.00008886161,0.000034099838,0.00026683442,0.0000015813232],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068885616,0.00041094693,0.13980012,0.8475783,0.010599652,0.000030628835,0.0000139594,1.8645268e-7,2.2167415e-8,0.000010539669,0.000073430514,0.0014133231],"study_design_scores_gemma":[0.0008560253,0.00017851942,0.03231674,0.032007616,0.9340859,0.00000507487,0.000013731226,0.0000058853634,4.2852176e-7,0.00001862103,0.0002006846,0.0003107786],"about_ca_topic_score_codex":0.000047870108,"about_ca_topic_score_gemma":0.00028280818,"teacher_disagreement_score":0.92348623,"about_ca_system_score_codex":0.00006516697,"about_ca_system_score_gemma":0.0006749967,"threshold_uncertainty_score":0.999974},"labels":[],"label_agreement":null},{"id":"W2516225617","doi":"10.1186/s12879-016-1803-9","title":"Predicting invasive fungal disease due to Candida species in non-neutropenic, critically ill, adult patients in United Kingdom critical care units","year":2016,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute for Health and Care Research","keywords":"Medical microbiology; Critically ill; Medicine; Intensive care medicine; Fungal disease; Critical illness; Disease; Parasitology; Internal medicine; Immunology; Pathology; Dermatology","score_opus":0.019819126728741938,"score_gpt":0.28293861039148094,"score_spread":0.263119483662739,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2516225617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967003,0.00009830757,0.00016808647,0.00036127117,0.00024122534,0.0010397629,0.0006123237,0.00011336307,0.0006653795],"genre_scores_gemma":[0.99773026,0.000025426534,0.000028079916,0.0016268382,0.00019304473,0.0001496165,0.00011913992,0.00004631589,0.000081266284],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973071,0.00022918331,0.0005683863,0.00067247835,0.0005160326,0.0007067681],"domain_scores_gemma":[0.9949969,0.0010977241,0.00005388301,0.0004891583,0.0024296427,0.00093265926],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010107375,0.0003334194,0.00051851757,0.00049763964,0.00015255366,0.00005609146,0.00014729812,0.00011430347,0.00013878258],"category_scores_gemma":[0.03306283,0.00025714963,0.00013124429,0.00095953967,0.00027124287,0.0002735195,0.00014229189,0.00023325652,0.00005817167],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016882002,0.00064980023,0.99474293,0.00083705666,0.000014248421,0.0005011766,0.0003501513,0.000013492843,0.00015711426,0.0006193323,0.000163348,0.00026314385],"study_design_scores_gemma":[0.0041123964,0.00050166366,0.99162763,0.0020074965,0.00012557016,0.0000046823025,0.00095238356,0.000027653166,0.0001460383,0.00011014606,0.000056842393,0.000327505],"about_ca_topic_score_codex":0.0013015412,"about_ca_topic_score_gemma":0.021213526,"teacher_disagreement_score":0.03296176,"about_ca_system_score_codex":0.0006693148,"about_ca_system_score_gemma":0.0008549732,"threshold_uncertainty_score":0.9999881},"labels":[],"label_agreement":null},{"id":"W2523052506","doi":"10.1182/blood.v112.11.4841.4841","title":"Posaconazole as Prophylaxis in Immunocompromised Patients: A Single Center Experience","year":2008,"lang":"en","type":"article","venue":"Blood","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Medicine; Posaconazole; Internal medicine; Neutropenia; Mucositis; Hematopoietic stem cell transplantation; Discontinuation; Transplantation; Gastroenterology; Surgery; Chemotherapy; Aspergillosis; Immunology; Itraconazole; Antifungal; Dermatology","score_opus":0.016057621902210387,"score_gpt":0.24649214150510074,"score_spread":0.23043451960289035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2523052506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936658,0.0001929828,0.0000037457426,0.000039562226,0.000048587004,0.0004174672,0.000004427385,0.00003479304,0.005592636],"genre_scores_gemma":[0.9988667,0.000022672753,0.00019891611,0.00020597504,0.000028892598,0.000031196487,0.0000157663,0.000011744029,0.00061813614],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99900854,0.00002591904,0.00023735687,0.00026066677,0.00022983643,0.00023769603],"domain_scores_gemma":[0.99948883,0.000016814087,0.00004013689,0.0002901858,0.00008350718,0.00008053012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000045274646,0.00011055199,0.00020564857,0.000051505023,0.000058929338,0.000006381859,0.00007986624,0.00006418882,0.00017491856],"category_scores_gemma":[0.00011511157,0.00009339046,0.000069962574,0.00015898062,0.00011049184,0.00009078913,0.000031431595,0.00013731333,0.00008920545],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030743907,0.004660041,0.94192815,0.00003134009,0.0000121145895,0.000121971214,0.0018396471,5.565343e-8,0.05031191,0.0000073815377,0.00003083112,0.00074912724],"study_design_scores_gemma":[0.007987864,0.0010389261,0.9435414,0.0000914652,0.000010456703,0.00004567827,0.00030460933,0.0000023114796,0.04593736,0.000019313211,0.0008799339,0.0001406492],"about_ca_topic_score_codex":0.00007117747,"about_ca_topic_score_gemma":0.00001724842,"teacher_disagreement_score":0.007680425,"about_ca_system_score_codex":0.00004481688,"about_ca_system_score_gemma":0.000069233836,"threshold_uncertainty_score":0.38083524},"labels":[],"label_agreement":null},{"id":"W2524290249","doi":"10.1186/s13223-016-0152-y","title":"Genetic susceptibility to allergic bronchopulmonary aspergillosis in asthma: a genetic association study","year":2016,"lang":"en","type":"article","venue":"Allergy Asthma and Clinical Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"European Commission; Seventh Framework Programme; University of Manchester; Medical Research Council; National Institute for Health and Care Research","keywords":"Allergic bronchopulmonary aspergillosis; Immunology; Single-nucleotide polymorphism; Aspergillus fumigatus; Asthma; Allergy; Genetic predisposition; Aspergillosis; Medicine; Biology; Genotype; Disease; Immunoglobulin E; Gene; Genetics; Internal medicine; Antibody","score_opus":0.017728878141418932,"score_gpt":0.3118967972990357,"score_spread":0.29416791915761675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2524290249","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940504,0.0011314413,0.00013123629,0.00307429,0.00033272378,0.0007959507,0.0000064488186,0.0000610339,0.00041651173],"genre_scores_gemma":[0.99419814,0.002014315,0.00052692235,0.0006576376,0.00016983108,0.00005996916,0.000003830132,0.000031476342,0.0023379019],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99580806,0.00075658475,0.0013158519,0.0011068352,0.00034421225,0.000668459],"domain_scores_gemma":[0.9976545,0.00085717294,0.00020505626,0.00080178,0.00019898322,0.00028252107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011155873,0.0003156813,0.00091304985,0.00015023528,0.00010247225,0.000016564578,0.0002191377,0.0004995222,0.00063368],"category_scores_gemma":[0.0015433012,0.00023065474,0.00024362012,0.0002997597,0.00024143407,0.00008612778,0.00025043686,0.00045188252,0.00026513243],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017919515,0.002049683,0.9364139,0.0000091203,0.00044364788,0.00015903385,0.00016080555,0.0000018893488,0.002407251,0.000027320833,0.00025563972,0.056279775],"study_design_scores_gemma":[0.004117045,0.004327179,0.985657,0.00006566002,0.00003259044,0.000017994023,0.00044823677,0.000018555464,0.000019002939,0.00021772204,0.0048186774,0.0002603571],"about_ca_topic_score_codex":0.00036696938,"about_ca_topic_score_gemma":0.006182264,"teacher_disagreement_score":0.056019418,"about_ca_system_score_codex":0.00031603966,"about_ca_system_score_gemma":0.0001503667,"threshold_uncertainty_score":0.9405827},"labels":[],"label_agreement":null},{"id":"W2525605172","doi":"10.1080/21505594.2016.1231278","title":"Aspergillosis and stem cell transplantation: An overview of experimental pathogenesis studies","year":2016,"lang":"en","type":"review","venue":"Virulence","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"Aspergillus fumigatus; Biology; Aspergillosis; Immunology; Immune system; Hematopoietic stem cell transplantation; Transplantation; Aspergillus; Pathogen; Stem cell; Host (biology); Microbiology; Medicine","score_opus":0.1887956689269359,"score_gpt":0.4231612137740763,"score_spread":0.2343655448471404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2525605172","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008021255,0.9909958,0.0000069643124,0.0000060749016,0.00007688314,0.00046071174,0.00019723091,0.000021522208,0.00021353249],"genre_scores_gemma":[0.00609517,0.9932742,0.00011510711,0.000028249797,0.00005686834,0.000050155744,0.000015083143,0.000027367809,0.00033778383],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983982,0.00014706569,0.0005298537,0.00047901462,0.00027267192,0.00017320525],"domain_scores_gemma":[0.9990258,0.00014603553,0.00021797007,0.0004192501,0.00007792692,0.00011298435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022216795,0.00030429105,0.0014935628,0.00007353213,0.000057008296,0.0000063310918,0.00011236278,0.00015203604,0.00007468385],"category_scores_gemma":[0.000008994463,0.00019071343,0.00026358286,0.00013178596,0.00019811223,0.00010806672,0.000032388027,0.00009048464,0.000021834658],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051011542,0.00015943198,0.00056025106,0.07040574,0.00013011547,0.000053304175,0.000403528,3.6308452e-9,0.0011636484,0.000103287144,0.000026687829,0.926943],"study_design_scores_gemma":[0.002298788,0.0028397914,0.0036069783,0.31319848,0.007860842,0.00028189967,0.0031349438,0.0000014739933,0.016243516,0.000051846127,0.6484816,0.0019998457],"about_ca_topic_score_codex":0.0000051432226,"about_ca_topic_score_gemma":0.0000035642954,"teacher_disagreement_score":0.92494315,"about_ca_system_score_codex":0.00006788691,"about_ca_system_score_gemma":0.00012378134,"threshold_uncertainty_score":0.7777068},"labels":[],"label_agreement":null},{"id":"W2528150422","doi":"10.1371/journal.pgen.1006350","title":"Metal Chelation as a Powerful Strategy to Probe Cellular Circuitry Governing Fungal Drug Resistance and Morphogenesis","year":2016,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Ministry of Trade, Industry and Energy; Canada Research Chairs","keywords":"Caspofungin; Echinocandin; Echinocandins; Biology; Candida albicans; Anidulafungin; Antifungal drug; Drug resistance; Ponatinib; Virulence; Allosteric regulation; Fungal protein; Microbiology; Mutant; Gene; Dasatinib; Cell biology; Signal transduction; Biochemistry; Tyrosine kinase; Enzyme; Amphotericin B","score_opus":0.01895999727692549,"score_gpt":0.2495113338521185,"score_spread":0.230551336575193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2528150422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904578,0.003073276,0.0013076675,0.0006685516,0.000052037485,0.00051349425,0.000031896485,0.000053044834,0.003842229],"genre_scores_gemma":[0.98569924,0.00017224482,0.0010300771,0.00018797544,0.00013139406,0.0000137767,0.000008452957,0.000036519632,0.012720307],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983232,0.000059570342,0.0003121425,0.00048826722,0.00048333532,0.00033349852],"domain_scores_gemma":[0.99896884,0.00007974863,0.000089579036,0.0004231467,0.00017017733,0.00026853778],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022264158,0.00020386826,0.0003067596,0.000057702768,0.00008474988,0.00002705825,0.00009235273,0.000105889914,0.00019182735],"category_scores_gemma":[0.00021907223,0.0001550437,0.00007611827,0.00016680929,0.00009699115,0.00007329747,0.000053458232,0.0001109265,0.0002150817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002421998,0.00010251218,0.07562149,0.00014945521,0.000072100476,0.00004725752,0.00022196166,0.0000016056434,0.921426,0.00017494702,0.00031329494,0.0016271917],"study_design_scores_gemma":[0.0011750368,0.0003624832,0.1103997,0.00035896868,0.00031450682,0.000014800647,0.00031394442,0.00006345723,0.8823865,0.0006225826,0.0035877635,0.00040022357],"about_ca_topic_score_codex":0.0000050912035,"about_ca_topic_score_gemma":0.000089971734,"teacher_disagreement_score":0.039039455,"about_ca_system_score_codex":0.00011132918,"about_ca_system_score_gemma":0.00016442958,"threshold_uncertainty_score":0.63224983},"labels":[],"label_agreement":null},{"id":"W2528159938","doi":"10.1016/j.mimet.2016.09.020","title":"Use of phylogenetical analysis to predict susceptibility of pathogenic Candida spp. to antifungal drugs","year":2016,"lang":"en","type":"article","venue":"Journal of Microbiological Methods","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôtel-Dieu de Québec; Université Laval","funders":"Canadian Institutes of Health Research; Nasivvik Centre for Inuit Health and Changing Environments","keywords":"Phylogenetic tree; Biology; Antifungal drug; Antifungal; Microbiology; Drug resistance; Echinocandins; Fungus; Pathogenic fungus; Fungicide; Phylogenetics; Genetics; Gene; Fluconazole; Caspofungin; Botany","score_opus":0.05338977031873024,"score_gpt":0.3706300952963459,"score_spread":0.3172403249776157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2528159938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91637766,0.0002540241,0.08217758,0.00053688657,0.00012645255,0.0003108968,0.00017284627,0.000008066914,0.000035566514],"genre_scores_gemma":[0.7800939,0.00009895685,0.21935706,0.00021001419,0.000080695434,0.0000015370239,0.0000022139893,0.000009215578,0.0001463775],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9960959,0.0011609719,0.0015864087,0.00043698118,0.00032322915,0.00039653212],"domain_scores_gemma":[0.9957843,0.0015856096,0.0005468374,0.00060698803,0.0009626179,0.0005136742],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0041443473,0.00024493394,0.0016466362,0.00037157122,0.000032903106,0.00000830621,0.00030340345,0.0002632887,0.00063943706],"category_scores_gemma":[0.0058896104,0.00012733384,0.0010649498,0.0009791714,0.00035735054,0.00006158368,0.00015478906,0.00026579507,0.000007621234],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020611626,0.00030008113,0.32214794,0.0000313608,0.0004830131,0.000015342917,0.00005489908,0.000009926015,0.65981305,0.000009882229,0.00030137697,0.014771978],"study_design_scores_gemma":[0.0005856566,0.0023899332,0.67030174,0.0001267637,0.00087042374,0.00003238697,0.0000629253,0.0000040341647,0.32437342,0.00007176375,0.0010578664,0.00012309164],"about_ca_topic_score_codex":0.000021570098,"about_ca_topic_score_gemma":0.000029270128,"teacher_disagreement_score":0.3481538,"about_ca_system_score_codex":0.00013540876,"about_ca_system_score_gemma":0.00019693948,"threshold_uncertainty_score":0.7050839},"labels":[],"label_agreement":null},{"id":"W2529204894","doi":"10.1093/mmy/myw086","title":"Epidemiological features of invasive mold infections among solid organ transplant recipients: PATH Alliance<sup>®</sup>registry analysis","year":2016,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Astellas Pharma Global Development; Chimerix; Pfizer","keywords":"Interquartile range; Medicine; Epidemiology; Aspergillosis; Internal medicine; Antifungal; Surgery; Gastroenterology; Immunology; Dermatology","score_opus":0.016858152972555964,"score_gpt":0.3002671725337635,"score_spread":0.28340901956120756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2529204894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98961395,0.0002605665,0.004751489,0.003825746,0.00013146932,0.0002914354,0.000075156015,0.00006745433,0.0009827595],"genre_scores_gemma":[0.99568564,0.0017915381,0.00019646762,0.0010725482,0.0001978649,0.00004340869,0.000063307314,0.000013751335,0.00093544746],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970879,0.00045827826,0.00077891134,0.00060939474,0.000524256,0.00054124603],"domain_scores_gemma":[0.99618006,0.0022910459,0.00021242275,0.00056246604,0.00019824681,0.00055576675],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010663959,0.00024564625,0.001247635,0.00014435872,0.00009348625,0.0000035782036,0.00025213856,0.00074632355,0.0043173786],"category_scores_gemma":[0.010430761,0.00013838899,0.0004570659,0.00063648284,0.001300368,0.00006258245,0.00006325606,0.00054293673,0.000041573618],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036569213,0.00054848654,0.98908955,0.0000657575,0.00072495855,0.00028753592,0.00016973061,0.0000091197435,0.0025667613,0.00038130957,0.0034006315,0.0023904748],"study_design_scores_gemma":[0.001256703,0.00077907817,0.9944517,0.00032598744,0.0007710635,0.00005859088,0.000107298794,0.000076923614,0.0009828012,0.00040675112,0.0006262246,0.00015685026],"about_ca_topic_score_codex":0.00016868411,"about_ca_topic_score_gemma":0.0008283562,"teacher_disagreement_score":0.009364365,"about_ca_system_score_codex":0.0001185088,"about_ca_system_score_gemma":0.00034381577,"threshold_uncertainty_score":0.9979048},"labels":[],"label_agreement":null},{"id":"W2529512895","doi":"10.1039/c6ob01718e","title":"Effect of novel triazole–amino acid hybrids on growth and virulence of Candida species: in vitro and in vivo studies","year":2016,"lang":"en","type":"article","venue":"Organic & Biomolecular Chemistry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Genome Canada","funders":"Royal Society of Chemistry; Royal Society","keywords":"Chemistry; In vivo; Virulence; In vitro; Hybrid; Triazole; Microbiology; Antifungal; Biochemistry; Biology; Genetics; Gene; Botany; Organic chemistry","score_opus":0.009613424265082092,"score_gpt":0.2640314546881492,"score_spread":0.2544180304230671,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2529512895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976943,0.0014895905,0.0002331982,0.000114874,0.000013875648,0.0001629552,0.000031179312,0.0000064853666,0.00025351832],"genre_scores_gemma":[0.9990851,0.00071303593,0.000040634943,0.000027384944,0.000015666705,0.000004390452,0.0000018118982,0.000012371214,0.00009956598],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989748,0.000024487988,0.00030451614,0.00032001277,0.00019874233,0.00017743018],"domain_scores_gemma":[0.9993877,0.00016594984,0.000090624875,0.0002491426,0.000042591157,0.000063980675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003135393,0.00016474184,0.00050849136,0.000048883823,0.000013096868,0.0000027521812,0.00006654067,0.00008557356,0.000030298439],"category_scores_gemma":[0.000872424,0.00011158207,0.000047528825,0.00019349552,0.00032934255,0.000028879671,0.00006094579,0.00009204073,4.0300472e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014086231,0.000115576506,0.027394177,0.0012992373,0.00003754335,0.00004881613,0.000087958986,2.0421418e-9,0.9692277,0.0000024316596,0.0000069230455,0.00037106572],"study_design_scores_gemma":[0.0038602136,0.00023840854,0.0109453425,0.00069754984,0.000039556453,0.000014866265,0.000120286255,0.0000019855706,0.9839715,0.000006744191,0.000004686352,0.00009890498],"about_ca_topic_score_codex":0.00001882474,"about_ca_topic_score_gemma":0.00000754059,"teacher_disagreement_score":0.016448835,"about_ca_system_score_codex":0.000075792894,"about_ca_system_score_gemma":0.00006002529,"threshold_uncertainty_score":0.45501846},"labels":[],"label_agreement":null},{"id":"W2530414747","doi":"10.1128/aac.01959-16","title":"Beauvericin Potentiates Azole Activity via Inhibition of Multidrug Efflux, Blocks Candida albicans Morphogenesis, and Is Effluxed via Yor1 and Circuitry Controlled by Zcf29","year":2016,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; University of Toronto; Concordia University","keywords":"Efflux; Candida albicans; Itraconazole; Azole; Beauvericin; Microbiology; Schizosaccharomyces pombe; Pharmacology; Fungi imperfecti; Morphogenesis; Chemistry; Multiple drug resistance; Biology; Biochemistry; Antibiotics; Yeast; Antifungal; Mycotoxin; Saccharomyces cerevisiae","score_opus":0.00593971814591731,"score_gpt":0.22880942135040272,"score_spread":0.2228697032044854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2530414747","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955172,0.00028258006,0.0013747829,0.0019297776,0.000045016088,0.0006290546,0.00014069874,0.000026280766,0.000054626278],"genre_scores_gemma":[0.99309933,0.0037174714,0.00009248807,0.0022397258,0.000048548205,0.000007925756,0.00002283456,0.000030976258,0.0007407246],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862564,0.00005146769,0.00034215712,0.0004947519,0.00018215198,0.00030383488],"domain_scores_gemma":[0.9992549,0.00007452524,0.0001859193,0.00022844331,0.000087120425,0.0001691248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018079707,0.00028808365,0.00072475546,0.00006696599,0.00014181787,0.000022988874,0.000046609373,0.00017181257,0.00022676817],"category_scores_gemma":[0.000015321095,0.00019905875,0.00012009612,0.000084343286,0.0003322701,0.000119091455,0.000034371227,0.00009723129,0.0000021233584],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014055616,0.00027290834,0.16408658,0.00011686399,0.00019186232,0.0000046287023,0.00021677044,4.7904734e-8,0.8145274,6.723952e-7,0.0038240873,0.0153526],"study_design_scores_gemma":[0.017978204,0.00024765654,0.24819005,0.0002145085,0.0001805804,0.000026661852,0.000035528752,0.00011028207,0.73185676,0.000030770723,0.00084990094,0.00027911388],"about_ca_topic_score_codex":0.0007424896,"about_ca_topic_score_gemma":0.000031349286,"teacher_disagreement_score":0.08410347,"about_ca_system_score_codex":0.000034846566,"about_ca_system_score_gemma":0.000035591514,"threshold_uncertainty_score":0.811738},"labels":[],"label_agreement":null},{"id":"W2530875774","doi":"10.1182/blood.v114.22.1390.1390","title":"Empiric Antifungal Therapy with Amphotericin B in the Era of Fluconazole Prophylaxis: a Cohort Study in Adults with Acute Myeloid Leukemia Treated within An Institutional Antifungal Policy.","year":2009,"lang":"en","type":"article","venue":"Blood","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Hamilton Health Sciences; Juravinski Cancer Centre","funders":"","keywords":"Fluconazole; Neutropenia; Amphotericin B; Caspofungin; Medicine; Febrile neutropenia; Internal medicine; Empiric therapy; Myeloid leukemia; Chemotherapy; Intensive care medicine; Surgery; Antifungal; Pathology; Dermatology","score_opus":0.01176790856906738,"score_gpt":0.2727000233351937,"score_spread":0.2609321147661263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2530875774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99640095,0.00015635669,0.000010486433,0.00013700665,0.000014849487,0.0026885178,0.00003006551,0.00004901957,0.0005127261],"genre_scores_gemma":[0.99897015,0.00008504476,0.00027559025,0.0003800992,0.00007849187,0.00007711289,0.000069850146,0.00002405151,0.000039597213],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99720114,0.0002584336,0.00061486155,0.00066624716,0.0008178966,0.0004414085],"domain_scores_gemma":[0.9987275,0.00004424821,0.00019489588,0.0007221317,0.00019473468,0.000116467374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006890123,0.00037820864,0.00072171516,0.00028566155,0.00011351303,0.000036069323,0.0002817097,0.00013729626,0.000016610227],"category_scores_gemma":[0.00004488343,0.00021164188,0.000068449444,0.0016088114,0.0002931142,0.00027372813,0.00001636505,0.00065564096,0.0000027854076],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010107504,0.0070319055,0.96303767,0.000041425687,0.00018890249,0.0011275626,0.0053769536,0.000035104837,0.012091368,0.000040352938,0.0000050072454,0.000916224],"study_design_scores_gemma":[0.015977006,0.013311282,0.9618065,0.00038454737,0.00012643459,0.00023143114,0.0016708378,0.0000672857,0.006155279,0.000014994261,0.0000023410025,0.0002521075],"about_ca_topic_score_codex":0.002397636,"about_ca_topic_score_gemma":0.003934122,"teacher_disagreement_score":0.006279377,"about_ca_system_score_codex":0.00017095152,"about_ca_system_score_gemma":0.0014565232,"threshold_uncertainty_score":0.8630505},"labels":[],"label_agreement":null},{"id":"W2532305189","doi":"10.1128/microbiolspec.funk-0002-2016","title":"Antifungal Drugs: The Current Armamentarium and Development of New Agents","year":2016,"lang":"en","type":"review","venue":"Microbiology Spectrum","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":265,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McMaster University","funders":"","keywords":"Antifungal drug; Cryptococcus neoformans; Antifungal drugs; Antifungal; Drug; Cryptococcal meningitis; Drug resistance; Biology; Drug development; Aspergillosis; Intensive care medicine; Medicine; Pharmacology; Human immunodeficiency virus (HIV); Immunology; Microbiology","score_opus":0.05345941167475598,"score_gpt":0.3513759378843082,"score_spread":0.2979165262095522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2532305189","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011633983,0.9967607,0.00007306073,0.00025580253,0.0005209882,0.0008642813,0.00008814796,0.00002139927,0.00025217133],"genre_scores_gemma":[0.0004926329,0.9970662,0.0001982786,0.000081916536,0.00020643501,0.000012992892,0.0001804735,0.000029288649,0.0017318118],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980397,0.00012652011,0.0007923972,0.0005364323,0.00008530912,0.00041959184],"domain_scores_gemma":[0.99887675,0.000113629656,0.00036475033,0.0004953091,0.000028346116,0.00012118929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035135722,0.00040404458,0.0015289447,0.00010814677,0.00010661995,0.000009020135,0.00023882926,0.00021317009,0.00043068474],"category_scores_gemma":[0.00003077124,0.00020245933,0.00028558628,0.00011093817,0.00036415196,0.000021699003,0.00020318088,0.0004867815,0.00019561058],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042613465,0.00008098614,0.0005533652,0.0043295664,0.00033794635,0.0000051771285,0.00021961787,9.423392e-10,0.00020168438,0.000028481303,0.008553401,0.98564714],"study_design_scores_gemma":[0.00041182034,0.0000632712,0.00054282486,0.0062930337,0.00036108828,0.00006327762,0.000026113159,2.3715804e-8,0.00023255261,0.000022568529,0.9917819,0.00020156367],"about_ca_topic_score_codex":0.000009441277,"about_ca_topic_score_gemma":0.000034058306,"teacher_disagreement_score":0.9854456,"about_ca_system_score_codex":0.00019360156,"about_ca_system_score_gemma":0.0012332656,"threshold_uncertainty_score":0.82560515},"labels":[],"label_agreement":null},{"id":"W2535442184","doi":"10.1016/j.athoracsur.2016.08.069","title":"A Series of Transbronchial Removal of Intracavitary Pulmonary Aspergilloma","year":2016,"lang":"en","type":"article","venue":"The Annals of Thoracic Surgery","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Calgary","funders":"","keywords":"Medicine; Aspergilloma; Aspergillosis; Surgery; Bronchoscopy; Cachexia; Pneumonectomy; Lung; Radiology; Internal medicine; Cancer","score_opus":0.08601865371571575,"score_gpt":0.3575331252507229,"score_spread":0.27151447153500713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2535442184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99006057,0.0027250801,0.000051829087,0.0048935763,0.00011117216,0.00015788821,0.0000630419,0.00001699108,0.0019198273],"genre_scores_gemma":[0.9973839,0.0013328894,0.00013041511,0.000114980365,0.00010251217,0.0000032596736,0.000005035464,0.000016195267,0.00091084716],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983111,0.00017976334,0.0006790858,0.0001837715,0.0004094879,0.00023679131],"domain_scores_gemma":[0.9979737,0.0008073068,0.00027445419,0.0005869327,0.00028345437,0.00007415168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015316195,0.00014068093,0.0006901411,0.0001072557,0.000032796677,0.0000014096945,0.00014455842,0.00009281535,0.00020878401],"category_scores_gemma":[0.0005376002,0.00007447882,0.000470781,0.00023636766,0.00063678256,0.00015523384,0.000032674172,0.00008273133,0.0000039883685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014683778,0.0005785981,0.09036497,0.0013014274,0.00030225987,0.00021591452,0.00035510332,8.5988944e-7,0.54867095,0.00061149406,0.0026028943,0.34031177],"study_design_scores_gemma":[0.00010808732,0.00024331192,0.20634697,0.0012852289,0.00012000101,0.00022332171,0.00034525926,0.0000041730523,0.78646296,0.002835443,0.0018767557,0.00014850748],"about_ca_topic_score_codex":0.000050638468,"about_ca_topic_score_gemma":0.000014007596,"teacher_disagreement_score":0.34016326,"about_ca_system_score_codex":0.000007203858,"about_ca_system_score_gemma":0.00017236569,"threshold_uncertainty_score":0.30371583},"labels":[],"label_agreement":null},{"id":"W2540816820","doi":"10.1093/infdis/jiw513","title":"Posaconazole-Loaded Leukocytes as a Novel Treatment Strategy Targeting Invasive Pulmonary Aspergillosis","year":2016,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Centre Intégré Universitaire de Santé et de Services Sociaux du Centre-Sud-de-l'Île-de-Montréal; Hôpital Maisonneuve-Rosemont; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Cystic Fibrosis Canada","keywords":"Posaconazole; In vivo; Aspergillus fumigatus; In vitro; Aspergillosis; Ex vivo; Microbiology; Biology; Pharmacology; Immunology; Antifungal; Amphotericin B; Biochemistry","score_opus":0.01748482007854957,"score_gpt":0.27147794872300146,"score_spread":0.2539931286444519,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2540816820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935126,0.0033926843,0.0001498631,0.0008492523,0.00010866905,0.00021433763,0.000029800553,0.00003208811,0.0017107634],"genre_scores_gemma":[0.99648756,0.0023583747,0.000012849098,0.00026710206,0.00034673812,0.0000049522387,0.000002746791,0.000019696361,0.00049995974],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986795,0.00010964703,0.0004523699,0.00013877431,0.00033870948,0.00028101009],"domain_scores_gemma":[0.998178,0.0006561316,0.0003414994,0.00022705243,0.00033960963,0.0002577092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025079283,0.00020202456,0.00039385827,0.000094630675,0.00019100728,0.000020910005,0.000113753995,0.000056704648,0.00034967836],"category_scores_gemma":[0.0007521302,0.00008959074,0.00033385374,0.00013369345,0.00017281262,0.00020821659,0.0000285726,0.000119545286,0.00004483763],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028327664,0.0016563061,0.5084358,0.00007019905,0.0006692426,0.00028089122,0.00020491477,0.00003885683,0.47275278,0.00014680914,0.0005695687,0.012341904],"study_design_scores_gemma":[0.007094813,0.0057618036,0.8576947,0.0008878597,0.0020475509,0.0018852267,0.0020322918,0.000014499789,0.11963584,0.0020502822,0.0005250485,0.00037010846],"about_ca_topic_score_codex":0.00011240994,"about_ca_topic_score_gemma":0.000028604423,"teacher_disagreement_score":0.35311693,"about_ca_system_score_codex":0.00037066353,"about_ca_system_score_gemma":0.0006440014,"threshold_uncertainty_score":0.3828733},"labels":[],"label_agreement":null},{"id":"W2541185728","doi":"10.1371/journal.pgen.1006405","title":"Signaling through Lrg1, Rho1 and Pkc1 Governs Candida albicans Morphogenesis in Response to Diverse Cues","year":2016,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; Wellcome Trust","keywords":"Filamentation; Biology; Candida albicans; Cell biology; Virulence; Genetics; Mutant; Protein kinase C; Signal transduction; Gene","score_opus":0.035053479965271,"score_gpt":0.28651870282414393,"score_spread":0.25146522285887296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2541185728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967119,0.0006469404,0.0002484406,0.0016278105,0.000043103428,0.000322892,0.00008149863,0.000027532344,0.00028989237],"genre_scores_gemma":[0.996004,0.0005146309,0.0013979322,0.0005758665,0.00007500699,0.000013252771,0.0000021025196,0.000023466815,0.0013937814],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986602,0.00009010127,0.0002483768,0.00036892723,0.00031636766,0.0003160048],"domain_scores_gemma":[0.9990764,0.00025155745,0.000042565793,0.00036119306,0.000081943545,0.00018630322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022371758,0.00015825915,0.0002856936,0.000058782058,0.00005848441,0.000012774489,0.00008829079,0.0000897152,0.00022043035],"category_scores_gemma":[0.0004362597,0.000114790324,0.000050981664,0.00017057708,0.0001132759,0.000047644786,0.000084578984,0.000072749215,0.000050862593],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00142297,0.00008844119,0.42040083,0.000036760288,0.0000280828,0.00006004281,0.000832143,0.0000040925106,0.57576036,0.000012363348,0.00024780995,0.0011060992],"study_design_scores_gemma":[0.0025127644,0.00095290696,0.64307475,0.00056720333,0.00018334575,0.000010990762,0.0015460465,0.000088703295,0.3429316,0.00022261194,0.007486739,0.00042233005],"about_ca_topic_score_codex":0.00011600915,"about_ca_topic_score_gemma":0.0010117819,"teacher_disagreement_score":0.23282877,"about_ca_system_score_codex":0.00015660873,"about_ca_system_score_gemma":0.00012433746,"threshold_uncertainty_score":0.46810135},"labels":[],"label_agreement":null},{"id":"W2542280653","doi":"10.12688/f1000research.9617.1","title":"Recent advances on Candida albicans biology and virulence","year":2016,"lang":"en","type":"preprint","venue":"F1000Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Université Laval","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Candida albicans; Virulence; Antifungal drug; Biology; Antifungal drugs; Antifungal; Human pathogen; Fungal pathogen; Pathogen; Corpus albicans; Drug resistance; Computational biology; Microbiology; Genetics; Gene","score_opus":0.055958027625892144,"score_gpt":0.4218013141405176,"score_spread":0.36584328651462544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2542280653","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8349357,0.05317266,0.00050399505,0.01908875,0.00073489797,0.0022049136,0.0005773071,0.00016899042,0.08861277],"genre_scores_gemma":[0.867345,0.12323824,0.00015725498,0.00046217194,0.0004169095,0.000109874774,0.00006996169,0.00003722796,0.008163379],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975929,0.0002059225,0.0002825393,0.00085737056,0.0005061482,0.0005551032],"domain_scores_gemma":[0.99807954,0.0004056651,0.00006946826,0.00083009683,0.00028977083,0.00032543304],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007188675,0.00024237693,0.00049228617,0.00017877723,0.00011155468,0.000027275764,0.0002631768,0.00032338026,0.001326298],"category_scores_gemma":[0.00090013916,0.00015915796,0.00008405593,0.000116849784,0.000674256,0.00003926549,0.00053556665,0.00097055925,0.00015675847],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025537875,0.00024769193,0.3114303,0.0009447985,0.0001208538,0.0001253004,0.00016072164,0.0000010576136,0.007684936,0.0032170755,0.007402249,0.66611123],"study_design_scores_gemma":[0.0013604945,0.0013451494,0.26043278,0.0017332631,0.000051104984,0.000013139584,0.00014464994,0.000056418234,0.0036697038,0.02422295,0.7064967,0.0004736532],"about_ca_topic_score_codex":0.00009820721,"about_ca_topic_score_gemma":0.00020085258,"teacher_disagreement_score":0.6990944,"about_ca_system_score_codex":0.00022291478,"about_ca_system_score_gemma":0.00060042524,"threshold_uncertainty_score":0.99958664},"labels":[],"label_agreement":null},{"id":"W2546959255","doi":"","title":"Unique cytokine and chemokine patterns in bronchoalveolar lavage are associated with specific causative pathogen among HIV infected patients with pneumonia in Medellin Colombia","year":2015,"lang":"en","type":"article","venue":"instname: Universidad de Antioquia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Medicine; Humanities; Human immunodeficiency virus (HIV); Virology; Art","score_opus":0.010155637996047864,"score_gpt":0.22130744320769738,"score_spread":0.2111518052116495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2546959255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978361,0.000053018965,0.00018892466,0.00015018487,0.000019925474,0.0007803361,0.00016965416,0.000067614725,0.0007342382],"genre_scores_gemma":[0.99899375,0.00008940871,0.00013244654,0.000098957076,0.000015806734,0.000006816058,0.00032916229,0.000040906434,0.00029276992],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99794513,0.00021426233,0.00034516,0.0005522378,0.000445659,0.00049752434],"domain_scores_gemma":[0.998587,0.00009801906,0.00025912398,0.0003312882,0.00042626142,0.00029827133],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003840996,0.000330314,0.00062887423,0.0003625307,0.000067654815,0.000033983182,0.00012227969,0.00026089765,0.000032879816],"category_scores_gemma":[0.00016486055,0.0002870653,0.000044566583,0.0007962513,0.00029447762,0.00036114163,0.000065514716,0.0005674095,0.0000048563384],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014231184,0.0005995045,0.99336314,0.00004591699,0.000071592964,0.0012679774,0.0017888445,0.000042541153,0.0010833524,0.000019079574,0.00013371643,0.00016124248],"study_design_scores_gemma":[0.010087618,0.0007114179,0.9847409,0.00094085897,0.00006542771,0.0000064128462,0.002098829,0.0001759668,0.0006209168,0.000017896087,0.00020053882,0.00033322815],"about_ca_topic_score_codex":0.00082833215,"about_ca_topic_score_gemma":0.017049931,"teacher_disagreement_score":0.0162216,"about_ca_system_score_codex":0.00091696763,"about_ca_system_score_gemma":0.0003060619,"threshold_uncertainty_score":0.99995816},"labels":[],"label_agreement":null},{"id":"W2551648587","doi":"10.1038/nmicrobiol.2016.211","title":"Aspergillus fumigatus CalA binds to integrin α5β1 and mediates host cell invasion","year":2016,"lang":"en","type":"article","venue":"Nature Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":102,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases; Clinical and Translational Science Institute, University of California, Los Angeles; Canadian Institutes of Health Research; National Institutes of Health; National Center for Advancing Translational Sciences; University of Wisconsin-Madison","keywords":"Aspergillus fumigatus; Endocytosis; Virulence; Cell biology; Biology; Microbiology; Integrin; Host (biology); Cell; Immunology; Ecology; Gene; Biochemistry","score_opus":0.005594797578429144,"score_gpt":0.244763501616156,"score_spread":0.23916870403772686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2551648587","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902546,0.00289405,0.00004949585,0.0047752587,0.0003831087,0.00027430922,0.000080833124,0.00004731142,0.0012410645],"genre_scores_gemma":[0.99345595,0.00035835395,0.00039697115,0.002620551,0.00016001922,0.0000060208436,0.00004052019,0.000017709554,0.002943882],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99880594,0.000066327455,0.00021710047,0.00049038505,0.0000602969,0.00035996767],"domain_scores_gemma":[0.99909836,0.00020805975,0.000046869838,0.0003164114,0.0001280836,0.00020224052],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022429587,0.00019566232,0.0003810909,0.00011676971,0.00005649428,0.000006635125,0.00011279595,0.0007359403,0.00022792701],"category_scores_gemma":[0.00043354632,0.00010799149,0.00007227379,0.00014860589,0.00020573729,0.00003664879,0.000117785974,0.0005291916,0.00019349791],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003418571,0.000051364983,0.06539625,0.000039519666,0.000016040945,0.000029618193,0.00011905049,8.5127025e-9,0.92259455,0.00009346297,0.0081263175,0.0031919628],"study_design_scores_gemma":[0.0020233335,0.0008025108,0.20274878,0.00021815735,0.00005306405,0.00013134212,0.00016212849,4.1777787e-7,0.69176024,0.00008487822,0.101725146,0.00028999787],"about_ca_topic_score_codex":0.000020600419,"about_ca_topic_score_gemma":0.00030476946,"teacher_disagreement_score":0.23083429,"about_ca_system_score_codex":0.00009139423,"about_ca_system_score_gemma":0.00008694602,"threshold_uncertainty_score":0.56762457},"labels":[],"label_agreement":null},{"id":"W2552834564","doi":"10.1111/mmi.13578","title":"Extensive functional redundancy in the regulation of <scp><i>C</i></scp><i>andida albicans</i> drug resistance and morphogenesis by lysine deacetylases <scp>H</scp>os2, <scp>H</scp>da1, <scp>R</scp>pd3 and <scp>R</scp>pd31","year":2016,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Biology; Morphogenesis; Lysine; Candida albicans; Genetics; Cell biology; Amino acid; Gene","score_opus":0.007527089161006162,"score_gpt":0.21737199709538235,"score_spread":0.20984490793437618,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2552834564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9566169,0.03258148,0.0029689262,0.0007970873,0.00048632573,0.002032796,0.0009888567,0.00018496277,0.0033427142],"genre_scores_gemma":[0.963438,0.003653665,0.0012398754,0.0030708208,0.00035562113,0.00022858077,0.0010998175,0.00024881918,0.026664848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9903499,0.0015175658,0.0021387234,0.0028366158,0.0009023643,0.0022548363],"domain_scores_gemma":[0.9850609,0.009624213,0.0013409059,0.0021124764,0.0012198532,0.00064167543],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.0021146392,0.0015387216,0.0023844272,0.00069916446,0.0006502661,0.00015127615,0.000837456,0.0011897583,0.00003263382],"category_scores_gemma":[0.012841753,0.0011909719,0.0006723305,0.0015207749,0.0025157598,0.0004669244,0.00047923633,0.0010286676,0.00008839574],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000080907004,0.0005244382,0.018424403,0.00040901062,0.0004537718,0.00019789203,0.0016919062,0.000020521056,0.7829897,0.0005013982,0.19439742,0.00030867502],"study_design_scores_gemma":[0.008224334,0.0009008575,0.09646316,0.0010708274,0.0010603653,0.0007749623,0.007366297,0.000041933254,0.5374431,0.0017845465,0.34462762,0.00024200429],"about_ca_topic_score_codex":0.00023835042,"about_ca_topic_score_gemma":0.00064007874,"teacher_disagreement_score":0.24554655,"about_ca_system_score_codex":0.00039091025,"about_ca_system_score_gemma":0.0005896437,"threshold_uncertainty_score":0.99973613},"labels":[],"label_agreement":null},{"id":"W2553977523","doi":"10.1093/mmy/myw118","title":"Successful treatment of<i>Aspergillus</i>ventriculitis through voriconazole adaptive pharmacotherapy, immunomodulation, and therapeutic monitoring of cerebrospinal fluid (1→3)-β-D-glucan","year":2016,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Sick Kids Foundation","keywords":"Ventriculitis; Voriconazole; Aspergillosis; Medicine; Pharmacotherapy; Aspergillus; Germinoma; Meningoencephalitis; Cerebrospinal fluid; Therapeutic drug monitoring; Meningitis; Immunology; Internal medicine; Pharmacology; Biology; Surgery; Drug; Microbiology; Chemotherapy","score_opus":0.05153529980488843,"score_gpt":0.3800728267645782,"score_spread":0.3285375269596898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2553977523","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015528083,0.98205656,0.0003301667,0.0001168372,0.0005603218,0.0010121263,0.000087024666,0.000026635264,0.00028223157],"genre_scores_gemma":[0.09082002,0.9080477,0.00017916213,0.000035413166,0.00048460884,0.00009747999,0.00002941386,0.000040920506,0.00026528013],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99690205,0.00036105828,0.0011754386,0.00057014875,0.00056233635,0.0004289929],"domain_scores_gemma":[0.9977772,0.00084051234,0.00053147913,0.00041094483,0.00021045117,0.00022938159],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00028340422,0.00046802178,0.00281959,0.00014024576,0.00007362435,0.000004472739,0.00019855116,0.00057318714,0.001544793],"category_scores_gemma":[0.0001414623,0.00028520884,0.00052290765,0.00029647708,0.0006707118,0.000051233015,0.00005247524,0.00024565944,0.000014691347],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041355166,0.00063594565,0.013187236,0.004500865,0.0011849465,0.00008098323,0.00018634147,5.344356e-8,0.00022752352,0.0004766977,0.000042304873,0.9790636],"study_design_scores_gemma":[0.005530474,0.0056128977,0.021130256,0.014974579,0.0027390083,0.00032289108,0.00017270607,0.000007678694,0.0007624611,0.0003261717,0.9478654,0.00055547536],"about_ca_topic_score_codex":0.00015671726,"about_ca_topic_score_gemma":0.000010852163,"teacher_disagreement_score":0.97850806,"about_ca_system_score_codex":0.00034997636,"about_ca_system_score_gemma":0.0010511129,"threshold_uncertainty_score":0.99996},"labels":[],"label_agreement":null},{"id":"W2555121231","doi":"10.1093/mmy/myw117","title":"<i>Aspergillus</i>in chronic lung disease: Modeling what goes on in the airways","year":2016,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Cystic Fibrosis Foundation","keywords":"Allergic bronchopulmonary aspergillosis; Aspergillus; Immunology; Asthma; Aspergillus fumigatus; Aspergillosis; Chronic bronchitis; Medicine; Lung; Disease; Pathogen; Sensitization; Biology; Intensive care medicine; Microbiology; Pathology; Immunoglobulin E; Internal medicine","score_opus":0.045410341967157285,"score_gpt":0.38583172151525047,"score_spread":0.3404213795480932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2555121231","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000338931,0.99277765,0.000114713504,0.004036433,0.0004835613,0.0012338595,0.000013688473,0.000030368903,0.00097081374],"genre_scores_gemma":[0.011795503,0.9850539,0.0000036113483,0.0016620788,0.00074511557,0.00027436367,0.00007380851,0.000040960967,0.0003506374],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99595875,0.000786868,0.0009413119,0.000757438,0.0008406842,0.00071495556],"domain_scores_gemma":[0.99721503,0.0014911758,0.00012228235,0.00079015375,0.000034610406,0.00034676588],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017321146,0.00042214218,0.0019544507,0.00024235794,0.00006006594,0.000019788959,0.00055091426,0.0007881767,0.0017417255],"category_scores_gemma":[0.001853782,0.00020564567,0.00045254442,0.00036997627,0.00031963093,0.00008230814,0.00010993569,0.001512984,0.00028170316],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014118914,0.00026815556,0.00015695549,0.010048306,0.000042885284,0.0016518465,0.000061499006,0.000003469294,4.3385126e-7,0.0011664449,0.0014731658,0.98498565],"study_design_scores_gemma":[0.0010594086,0.00021305571,0.0002346266,0.070798635,0.00028376683,0.000043257038,0.00006487558,0.0017863736,7.2783735e-8,0.00026541,0.92496413,0.00028642],"about_ca_topic_score_codex":0.000027327831,"about_ca_topic_score_gemma":0.0004598357,"teacher_disagreement_score":0.98469925,"about_ca_system_score_codex":0.0010359206,"about_ca_system_score_gemma":0.0024404172,"threshold_uncertainty_score":0.99917084},"labels":[],"label_agreement":null},{"id":"W2555335642","doi":"10.1371/journal.pgen.1006452","title":"Functional Genomic Analysis of Candida albicans Adherence Reveals a Key Role for the Arp2/3 Complex in Cell Wall Remodelling and Biofilm Formation","year":2016,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Genome Canada","keywords":"Biofilm; Candida albicans; Biology; Corpus albicans; Microbiology; Cell biology; Actin cytoskeleton; Extracellular matrix; Cell wall; Endocytosis; Cell; Cytoskeleton; Genetics; Bacteria","score_opus":0.05801882622323079,"score_gpt":0.26717918929866574,"score_spread":0.20916036307543495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2555335642","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890803,0.0008616305,0.009193479,0.0002663718,0.00001032063,0.00035438983,0.00007031084,0.0000053638278,0.00015779785],"genre_scores_gemma":[0.9975325,0.0005700593,0.001463544,0.00009727094,0.000022709577,0.000015983167,0.00002575633,0.0000068351364,0.0002653691],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99924374,0.00001860498,0.0002909468,0.00015904673,0.00014650523,0.00014118398],"domain_scores_gemma":[0.9992969,0.00022133307,0.00010173283,0.00021694013,0.00011768226,0.000045397177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018833794,0.00007775653,0.00023825753,0.0000895676,0.00004547072,0.0000059567274,0.000055857123,0.000047092763,0.00007060924],"category_scores_gemma":[0.000040616767,0.000046980414,0.00007435041,0.00017422941,0.00007286537,0.000027401646,0.000017020484,0.00003813699,0.0000018731139],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003076145,0.00008182856,0.2347382,0.00012137355,0.00015566843,3.343333e-7,0.00049075554,0.0005476633,0.7616472,0.00004949283,0.00011729685,0.0017425673],"study_design_scores_gemma":[0.0015446097,0.00029590135,0.5777532,0.00010536172,0.0013545402,0.0000011316145,0.0004059787,0.3751887,0.04194126,0.00082258804,0.00043104784,0.00015569982],"about_ca_topic_score_codex":0.000040648647,"about_ca_topic_score_gemma":0.00081600115,"teacher_disagreement_score":0.71970594,"about_ca_system_score_codex":0.000054783875,"about_ca_system_score_gemma":0.000050500832,"threshold_uncertainty_score":0.19158058},"labels":[],"label_agreement":null},{"id":"W2556883892","doi":"10.1097/inf.0000000000001396","title":"Disseminated Fusariosis in Immunocompromised Children—Analysis of Recent Cases Identified in the Global Fungiscope Registry","year":2016,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"AstraZeneca (Canada)","funders":"","keywords":"Fusariosis; Medicine; Disease; Pediatrics; Intensive care medicine; Dermatology; Pathology; Biology","score_opus":0.013996535819780312,"score_gpt":0.2952709916101933,"score_spread":0.281274455790413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2556883892","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956748,0.002177605,0.00007078148,0.0009823407,0.00012382511,0.0004542043,0.00008402138,0.00001606588,0.00041638647],"genre_scores_gemma":[0.99419504,0.005386714,0.0000044674034,0.00011057711,0.00019889262,0.000016621056,0.000012160314,0.000009640919,0.00006588296],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997681,0.00042312048,0.00074378087,0.00025101038,0.00054256624,0.00035852884],"domain_scores_gemma":[0.99811816,0.0005074128,0.00039055652,0.0006211913,0.00019557086,0.00016710651],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001292753,0.0001958252,0.0004665987,0.00033196842,0.00016516983,0.00004960977,0.00031303306,0.00007567999,0.0003826353],"category_scores_gemma":[0.0015792669,0.00009213482,0.00041149723,0.0025043744,0.00013746545,0.00011648901,0.000050840732,0.00036022282,0.000009560332],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010634623,0.000656788,0.9953284,0.00002938321,0.00033259502,0.00019385047,0.00017338902,0.00003198889,0.00019259391,0.00002707576,0.00026942883,0.001701013],"study_design_scores_gemma":[0.0017189296,0.0000879911,0.99437934,0.000055306627,0.002840854,0.0001723647,0.00019649329,0.000021383203,0.000019340305,0.00038005935,0.000013894601,0.00011404518],"about_ca_topic_score_codex":0.00033505028,"about_ca_topic_score_gemma":0.0005328375,"teacher_disagreement_score":0.0032091092,"about_ca_system_score_codex":0.00038894196,"about_ca_system_score_gemma":0.00040045116,"threshold_uncertainty_score":0.4189588},"labels":[],"label_agreement":null},{"id":"W2557859626","doi":"10.1182/blood.v108.11.2019.2019","title":"Empirical Versus Pre-Emptive Antifungal Therapy in High-Risk Febrile Neutropenic Patients: A Prospective Randomized Study.","year":2006,"lang":"en","type":"article","venue":"Blood","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Medicine; Internal medicine; Neutropenia; Febrile neutropenia; Mucositis; Randomized controlled trial; Clinical endpoint; Surgery; Chemotherapy","score_opus":0.012515978995588446,"score_gpt":0.28766324454365916,"score_spread":0.27514726554807073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2557859626","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929917,0.00038326066,0.000017844603,0.0000529912,0.0001793248,0.0042519514,0.000027840453,0.000081603015,0.0020134833],"genre_scores_gemma":[0.99882245,0.00009889399,0.00013255874,0.000051687744,0.00019222598,0.00023569548,0.00003739035,0.0000335162,0.00039558142],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997326,0.0005226481,0.0005923164,0.00065180584,0.00049964065,0.00040758876],"domain_scores_gemma":[0.9985722,0.00045409147,0.00018195738,0.0004603741,0.00023805677,0.000093331306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065731327,0.00028837015,0.0010144352,0.00012179193,0.00010962095,0.000033691562,0.00012560097,0.00012384303,0.00012617717],"category_scores_gemma":[0.00050238107,0.00021077141,0.00025547144,0.00040573548,0.00019543018,0.00013510365,0.00005139947,0.00042252976,0.000039610637],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.1804285,0.009088592,0.8090255,0.00001019374,0.00023990632,0.000045932484,0.00063493405,0.0000025671602,0.00010888245,0.00003497854,0.00017176053,0.00020819512],"study_design_scores_gemma":[0.36603448,0.0020780154,0.6306424,0.000022899007,0.00022367908,6.954658e-7,0.00019403143,0.0000076262977,0.0005135917,0.00012998341,0.000015785927,0.0001368167],"about_ca_topic_score_codex":0.0018134357,"about_ca_topic_score_gemma":0.0011625997,"teacher_disagreement_score":0.18560597,"about_ca_system_score_codex":0.00012698687,"about_ca_system_score_gemma":0.00014547973,"threshold_uncertainty_score":0.8595009},"labels":[],"label_agreement":null},{"id":"W2558547385","doi":"10.1186/s13223-016-0170-9","title":"Aspergillus march: from ABPA to aspergilloma to subacute invasive aspergillosis","year":2016,"lang":"en","type":"article","venue":"Allergy Asthma and Clinical Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Aspergilloma; Aspergillosis; Allergic bronchopulmonary aspergillosis; Aspergillus; Aspergillus fumigatus; Medicine; Pathology; Pneumonectomy; Lung; Lesion; Immunology; Biology; Internal medicine; Microbiology; Antibody; Immunoglobulin E","score_opus":0.030550996554233104,"score_gpt":0.3234047172261693,"score_spread":0.2928537206719362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2558547385","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97181255,0.0008317399,0.0007162893,0.022814762,0.00065872964,0.00044337678,0.000068444235,0.000098273056,0.002555844],"genre_scores_gemma":[0.9823362,0.0030250973,0.0017017005,0.0071654515,0.00035384463,0.000041826537,0.000026115044,0.00004806328,0.005301701],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9965374,0.00029048696,0.0009862181,0.0011709416,0.00028798956,0.0007269628],"domain_scores_gemma":[0.99649626,0.0014880303,0.00011890835,0.0009274689,0.0002590799,0.000710226],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0004576702,0.00037457887,0.0010118242,0.00014949708,0.00015807657,0.000021674512,0.00032801402,0.0005208965,0.0020499679],"category_scores_gemma":[0.0021163505,0.00025416215,0.0003473562,0.00026609318,0.00052769727,0.00011638108,0.00045103882,0.00037907006,0.0017568555],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015843619,0.0014920022,0.30679578,0.000023949722,0.0047808853,0.0009122571,0.00058464584,8.2e-7,0.22984275,0.0059702573,0.014472479,0.41928056],"study_design_scores_gemma":[0.0025910058,0.0030134995,0.89448583,0.00017823474,0.000057461064,0.000034091834,0.0002361098,0.0000024159006,0.002118955,0.0005476653,0.09637445,0.00036024503],"about_ca_topic_score_codex":0.00040751067,"about_ca_topic_score_gemma":0.002467199,"teacher_disagreement_score":0.5876901,"about_ca_system_score_codex":0.00010428545,"about_ca_system_score_gemma":0.00018528933,"threshold_uncertainty_score":0.99999106},"labels":[],"label_agreement":null},{"id":"W2560251417","doi":"10.1182/blood.v108.11.5293.5293","title":"Multicenter Evaluation of Fungal Prophylaxis in Hematopoietic Stem Cell Transplantation.","year":2006,"lang":"en","type":"article","venue":"Blood","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Abbott (Canada)","funders":"","keywords":"Medicine; Fluconazole; Internal medicine; Hematopoietic stem cell transplantation; Guideline; Posaconazole; Transplantation; Empiric therapy; Aspergillosis; Retrospective cohort study; Voriconazole; Surgery; Pediatrics; Antifungal; Immunology; Pathology; Dermatology","score_opus":0.01677503406526083,"score_gpt":0.2633426632576947,"score_spread":0.24656762919243386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2560251417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99515647,0.0005860057,0.00006026141,0.000026539841,0.00002487485,0.0004721741,0.000008644978,0.000011719376,0.003653332],"genre_scores_gemma":[0.99949414,0.0000133175245,0.00016944288,0.000011456372,0.000026901515,0.000017152452,0.000016061753,0.000007449292,0.00024408218],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99895936,0.000069246125,0.00028427472,0.00015955,0.0004102324,0.00011735898],"domain_scores_gemma":[0.9995864,0.00003129411,0.000056400844,0.00015976165,0.00014054195,0.000025597068],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039732302,0.000072371986,0.000164268,0.000059667236,0.000014571202,0.0000035429305,0.000032782104,0.000058048983,0.00007357864],"category_scores_gemma":[0.000009124445,0.00006172275,0.00005656301,0.00012459615,0.00003200051,0.000043361324,0.0000035046007,0.000079998244,0.00001351207],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002276943,0.0019639756,0.9196497,0.00086309796,0.0000115337,0.00003215531,0.00066868885,0.000030449928,0.07555765,0.000046710546,0.0000209208,0.00092737784],"study_design_scores_gemma":[0.0055039926,0.0001616685,0.8061378,0.00011834017,0.00023356269,0.0000074724926,0.00024890964,0.00017924652,0.18727139,0.000066591536,0.0000065410363,0.000064467946],"about_ca_topic_score_codex":0.000068804555,"about_ca_topic_score_gemma":0.0001739153,"teacher_disagreement_score":0.11351192,"about_ca_system_score_codex":0.000027258508,"about_ca_system_score_gemma":0.00008263862,"threshold_uncertainty_score":0.25169808},"labels":[],"label_agreement":null},{"id":"W2561336955","doi":"10.1200/jco.2011.29.15_suppl.e19713","title":"Invasive pulmonary aspergillosis in neutropenic patients: Early diagnosis by thoracic high-resolution CT scan.","year":2011,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba","funders":"","keywords":"Medicine; Halo sign; Radiology; Aspergillosis; High-resolution computed tomography; Lung; Pleural effusion; Computed tomography; Internal medicine","score_opus":0.10714419559798315,"score_gpt":0.40765998619511956,"score_spread":0.3005157905971364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2561336955","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937249,0.0006525422,0.000018964101,0.001239494,0.0007228733,0.00027223353,0.000010290301,0.00000839265,0.0033503447],"genre_scores_gemma":[0.9944006,0.0029659607,0.00075572886,0.0013731268,0.00029230403,0.000011295773,0.0000072610956,0.00001916362,0.00017456345],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99567825,0.00077494857,0.0024851684,0.00029941733,0.00042945155,0.00033276962],"domain_scores_gemma":[0.9958796,0.0015910811,0.0013332706,0.0002675535,0.0005243111,0.0004042202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024178948,0.00017295672,0.0014138615,0.00015665019,0.000045883353,0.0000066989955,0.00023918148,0.00031047597,0.00045261453],"category_scores_gemma":[0.005117651,0.0001267938,0.0004902715,0.00025397274,0.000290792,0.0003183059,0.00007294237,0.0011761183,0.00006136525],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004797782,0.0045296247,0.93000484,0.000030101532,0.00011167331,0.0007046328,0.00006992481,6.601861e-7,0.000114823364,0.000032118158,0.003766604,0.055837233],"study_design_scores_gemma":[0.0027906948,0.0095991595,0.98346025,0.00019350329,0.00022723865,0.00003069776,0.000094552095,0.000005310863,0.00036479897,0.00034993657,0.0027675657,0.00011626946],"about_ca_topic_score_codex":0.00043607745,"about_ca_topic_score_gemma":0.00042995706,"teacher_disagreement_score":0.055720963,"about_ca_system_score_codex":0.00035074455,"about_ca_system_score_gemma":0.00086312543,"threshold_uncertainty_score":0.6126676},"labels":[],"label_agreement":null},{"id":"W2561901426","doi":"10.1093/ofid/ofw172.1332","title":"Voriconazole Therapeutic Drug Monitoring Among Lung Transplant Recipients Receiving Targeted Therapy for Invasive Aspergillosis","year":2016,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal; Centre Hospitalier de l’Université de Montréal; McGill University","funders":"","keywords":"Medicine; Voriconazole; Aspergillosis; Therapeutic drug monitoring; Drug; Intensive care medicine; Pharmacotherapy; Targeted therapy; Lung; Pathogenic organism; Rescue therapy; Internal medicine; Antifungal; Pharmacology; Immunology; Dermatology; Microbiology","score_opus":0.01691502088687072,"score_gpt":0.29122622996405567,"score_spread":0.274311209077185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2561901426","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992901,0.001733468,0.00048997294,0.0005817927,0.00057586137,0.0020476708,0.00016810163,0.00014382278,0.0013583064],"genre_scores_gemma":[0.99534017,0.0019092091,0.00004290735,0.0003158578,0.00015499495,0.0005030706,0.000041560506,0.000063662155,0.0016285869],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980936,0.00009325544,0.00037490748,0.00057766755,0.00029239373,0.0005681615],"domain_scores_gemma":[0.9983933,0.0004703865,0.00015124265,0.00047098196,0.00022080196,0.00029331906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023031428,0.0003032116,0.0004868935,0.00010229456,0.000441081,0.00011315599,0.0002795578,0.000096743206,0.00027794554],"category_scores_gemma":[0.00022907661,0.0002012391,0.0003123957,0.00021121895,0.00011994713,0.00058367103,0.00006630195,0.00010718606,0.000022145226],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010937888,0.0004641442,0.9785289,0.00006185879,0.00031038714,0.000009909837,0.00019206457,0.0000014872408,0.00528781,0.00009289735,0.0010145516,0.012942207],"study_design_scores_gemma":[0.0036138208,0.00032398026,0.9810188,0.0006774392,0.00019322753,0.0000036507804,0.00017821982,0.000012929698,0.012750976,0.00080545736,0.00012228005,0.00029921456],"about_ca_topic_score_codex":0.00023649789,"about_ca_topic_score_gemma":0.00024450853,"teacher_disagreement_score":0.012642992,"about_ca_system_score_codex":0.00028793118,"about_ca_system_score_gemma":0.00020800951,"threshold_uncertainty_score":0.8206293},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"observational","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"observational","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"}],"label_agreement":"agree"},{"id":"W2562778159","doi":"10.1002/cpt.583","title":"Clinical Pharmacogenetics Implementation Consortium (CPIC) Guidelines for <i>CYP2C19</i> and Voriconazole Therapy","year":2016,"lang":"en","type":"article","venue":"Clinical Pharmacology & Therapeutics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":393,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Human Genome Research Institute; National Cancer Institute; Children's Mercy Hospital; National Institutes of Health; Sick Kids Foundation; Instituto de Salud Carlos III; Federación Española de Enfermedades Raras","keywords":"CYP2C19; Pharmacogenetics; Voriconazole; Medicine; Medical physics; Internal medicine; Biology; Genotype","score_opus":0.3670090222705866,"score_gpt":0.582856070294495,"score_spread":0.21584704802390842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2562778159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9452974,0.0037586032,0.0043890523,0.042421352,0.0023361917,0.0015180012,0.0000973728,0.00010160685,0.00008039925],"genre_scores_gemma":[0.7665041,0.05223503,0.003534174,0.17441174,0.002383937,0.00009245159,0.000023125394,0.00005571568,0.00075971044],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963878,0.0003901955,0.0017887142,0.00071236974,0.00021804978,0.0005028671],"domain_scores_gemma":[0.9957146,0.002329953,0.0003551358,0.00033381066,0.00091610645,0.00035040436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002146236,0.00029440425,0.0007581331,0.00005039683,0.00014774608,0.0000146601315,0.00018112658,0.0003304738,0.00054232567],"category_scores_gemma":[0.00015165181,0.00019189809,0.00041429934,0.00010294474,0.00090887974,0.00008005611,0.00006896941,0.00031117292,0.00004093764],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003043964,0.0005983165,0.56485415,0.000028923456,0.0008366126,0.000008170625,0.000025082827,1.447375e-7,0.06212907,0.000027796208,0.066009514,0.3024383],"study_design_scores_gemma":[0.026392391,0.0027163709,0.30709425,0.000031443935,0.001621371,0.000015951608,0.00011785541,0.00017599006,0.022762472,0.00058027136,0.63810194,0.00038972078],"about_ca_topic_score_codex":0.0000021760038,"about_ca_topic_score_gemma":0.00000654004,"teacher_disagreement_score":0.5720924,"about_ca_system_score_codex":0.00004053504,"about_ca_system_score_gemma":0.00032838594,"threshold_uncertainty_score":0.7825377},"labels":[],"label_agreement":null},{"id":"W2562937967","doi":"10.1111/myc.12631","title":"FungiScope<sup>™</sup>—Global Emerging Fungal Infection Registry","year":2017,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Astellas Pharma; Gilead Sciences; Meso Scale Diagnostics; Pfizer","keywords":"Medicine; Environmental health","score_opus":0.02710404504924319,"score_gpt":0.33145185472936683,"score_spread":0.30434780968012365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2562937967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9406957,0.0004873797,0.00027859746,0.0006543924,0.00024064619,0.00019999809,0.000023438108,0.000118927295,0.057300903],"genre_scores_gemma":[0.99355096,0.00019945562,0.0002287423,0.00023573246,0.000506948,0.000009597712,0.000017798298,0.000015627744,0.0052351127],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99870604,0.00003278579,0.00024065995,0.00037665313,0.0003031307,0.00034070123],"domain_scores_gemma":[0.99851114,0.000028302147,0.00013682984,0.0010527038,0.000111933616,0.0001590751],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024998529,0.00017913665,0.00030005685,0.000029757786,0.00058524153,0.00012773587,0.00016412401,0.00013001804,0.00037985152],"category_scores_gemma":[0.0007994745,0.00015580819,0.00016658088,0.000071651135,0.00017260166,0.00029469462,0.00009711661,0.00021451482,0.0002608441],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023886944,0.000108200424,0.97499824,0.0001334085,0.00005059188,0.00010779605,0.00008601514,0.000013507879,0.0011655033,0.00042312188,0.009112045,0.013562704],"study_design_scores_gemma":[0.0007156216,0.0001502775,0.96992606,0.00019092209,0.00009151095,0.000060072227,0.0001847825,0.00028262753,0.0014306208,0.0002986549,0.02648572,0.00018313764],"about_ca_topic_score_codex":0.000605605,"about_ca_topic_score_gemma":0.00021186922,"teacher_disagreement_score":0.052855268,"about_ca_system_score_codex":0.00013976773,"about_ca_system_score_gemma":0.0001305575,"threshold_uncertainty_score":0.63536733},"labels":[],"label_agreement":null},{"id":"W2563759234","doi":"10.1093/mmy/myw134","title":"7th Advances Against Aspergillosis: Basic, diagnostic, clinical and therapeutic studies","year":2016,"lang":"en","type":"editorial","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Aspergillosis; Intensive care medicine; Medicine; Immunology","score_opus":0.027451568921902838,"score_gpt":0.40631536627616127,"score_spread":0.37886379735425846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2563759234","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021882439,0.11215967,0.00004027909,0.0072159,0.85511094,0.000769511,0.000112396425,0.00014987428,0.002558986],"genre_scores_gemma":[0.05755429,0.2963599,0.000050218398,0.002965275,0.6410056,0.00012267249,0.00006761883,0.000061820596,0.0018126152],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.994939,0.00062388385,0.001172877,0.0011297369,0.0014506117,0.0006838359],"domain_scores_gemma":[0.9654689,0.032154787,0.0003205968,0.00069869094,0.00057950604,0.0007775192],"candidate_categories":["metaresearch","metaepi_narrow","sts","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0022716583,0.0005011929,0.002204025,0.00011163129,0.00014825909,0.000011617275,0.0003133199,0.0024698828,0.0006754888],"category_scores_gemma":[0.08335843,0.0003023307,0.00030692405,0.00011593983,0.0032053315,0.000052763742,0.00027269076,0.0019506662,0.00016702774],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064586167,0.00031330204,0.04890505,0.0006186632,0.00071284536,0.0006916227,0.000058790163,9.3341e-9,0.000011368223,0.00010060611,0.8252299,0.12271199],"study_design_scores_gemma":[0.0029819864,0.0017687312,0.016993592,0.0012712809,0.0005395121,0.000010993049,0.00014307535,0.0000020292562,0.000007755689,0.0007847968,0.9751743,0.00032195554],"about_ca_topic_score_codex":0.00000581972,"about_ca_topic_score_gemma":0.00017071662,"teacher_disagreement_score":0.21410537,"about_ca_system_score_codex":0.00012570553,"about_ca_system_score_gemma":0.0012347205,"threshold_uncertainty_score":0.9999429},"labels":[],"label_agreement":null},{"id":"W2570110838","doi":"10.1136/vetreccr-2016-000354","title":"Cutaneous candidiasis infection in two alpacas","year":2017,"lang":"en","type":"article","venue":"Veterinary Record Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thompson Rivers University","funders":"","keywords":"Ceftiofur; Medicine; Histopathology; Pyoderma; Staphylococcus aureus; Microbiological culture; Antiseptic; Groin; Dermatology; Pathology; Antibiotics; Surgery; Microbiology; Biology; Antibiotic resistance","score_opus":0.05070742848000953,"score_gpt":0.3709233566869239,"score_spread":0.32021592820691436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2570110838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989398,0.00007552752,0.000020528307,0.00010422022,0.0006663516,0.00032188284,0.0000027264105,0.000059031147,0.0093517],"genre_scores_gemma":[0.9981904,0.00022298915,0.00019085905,0.000052006137,0.00016366321,0.000024185878,0.0000075952375,0.000021827396,0.0011264888],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99869114,0.00004260065,0.0004366298,0.0003761751,0.0001716893,0.00028178614],"domain_scores_gemma":[0.9983549,0.000033879303,0.00027855666,0.0011031646,0.00006707868,0.00016242957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003084542,0.00016669868,0.00035135582,0.000102345664,0.00026457882,0.00006574209,0.000029634879,0.000081081416,0.00020664463],"category_scores_gemma":[0.00038412746,0.00015450164,0.00013409251,0.00006712933,0.00009749292,0.00023697001,0.000071209266,0.00022310895,0.000019289428],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024033504,0.00007191455,0.51154697,0.00005754333,0.000012338411,0.46562093,0.000044925782,4.987821e-7,0.0015769831,0.0000013122698,0.00008580917,0.020740442],"study_design_scores_gemma":[0.0003680989,0.00071892206,0.34213004,0.00014057284,0.00003904265,0.64918953,0.000052269806,0.00004796242,0.00031868237,0.00009354454,0.006741759,0.000159548],"about_ca_topic_score_codex":0.01682458,"about_ca_topic_score_gemma":0.008244851,"teacher_disagreement_score":0.18356861,"about_ca_system_score_codex":0.00019266462,"about_ca_system_score_gemma":0.00012137194,"threshold_uncertainty_score":0.9897225},"labels":[],"label_agreement":null},{"id":"W2578255482","doi":"10.1016/j.transproceed.2016.11.027","title":"Renal Allograft Aspergillus Infection Presenting With Obstructive Uropathy: A Case Report","year":2017,"lang":"en","type":"article","venue":"Transplantation Proceedings","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Obstructive uropathy; Medicine; Aspergillosis; Kidney; Kidney transplantation; Transplantation; Surgery; Internal medicine; Gastroenterology; Urinary system; Immunology","score_opus":0.020807329336902596,"score_gpt":0.29080754217225835,"score_spread":0.27000021283535575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2578255482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98460966,0.000011187028,0.0009347031,0.00016906325,0.00006453054,0.0004007184,0.000007197575,0.00010701833,0.013695897],"genre_scores_gemma":[0.99733007,0.00004853941,0.0014935782,0.00003449357,0.0001213361,0.000028100292,0.000028942854,0.000020666233,0.0008942982],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99883914,0.000006136471,0.0002657082,0.00038310795,0.00029159567,0.00021432461],"domain_scores_gemma":[0.9990241,0.000017153836,0.00027230187,0.0001913266,0.0003838883,0.000111241105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002525122,0.00015301863,0.00020887899,0.00007007456,0.00056114903,0.00011265309,0.0000555264,0.00008367938,0.00003206968],"category_scores_gemma":[0.00013402551,0.00012225627,0.000069369744,0.00007943846,0.00016789118,0.00059175753,0.000008873386,0.00019649637,0.0000057985017],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010587082,0.000064973174,0.9426557,0.00046387746,0.00008283138,0.03328806,0.0020377047,0.0000017893041,0.019238064,0.00037313433,0.000042024643,0.0006931236],"study_design_scores_gemma":[0.0012770097,0.00018281823,0.89717,0.00016693806,0.00031724994,0.08104545,0.00023086926,0.000080337726,0.019116206,0.0001041893,0.00014686993,0.00016206363],"about_ca_topic_score_codex":0.0003646217,"about_ca_topic_score_gemma":0.00020733364,"teacher_disagreement_score":0.047757387,"about_ca_system_score_codex":0.00004315321,"about_ca_system_score_gemma":0.00006553881,"threshold_uncertainty_score":0.4985466},"labels":[],"label_agreement":null},{"id":"W2582195065","doi":"10.1182/blood.v120.21.1490.1490","title":"Comparison of Sensitivity of Low-Dose CT Scan and Serum Galactomannan in Patients with Hematologic Malignancies and Positive Bronchoalveolar Lavage for Invasive Pulmonary Aspergillosis","year":2012,"lang":"en","type":"article","venue":"Blood","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; University of Toronto","funders":"","keywords":"Galactomannan; Medicine; Bronchoalveolar lavage; Aspergillosis; Gastroenterology; Hematopoietic stem cell transplantation; Internal medicine; Retrospective cohort study; Acute leukemia; Leukemia; Radiology; Transplantation; Pathology; Lung; Immunology","score_opus":0.012338779808772219,"score_gpt":0.2600840035547155,"score_spread":0.2477452237459433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2582195065","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983903,0.0007106904,0.000009433225,0.000034320885,0.000010765151,0.00060222915,0.00012505634,0.0000076147803,0.00010954892],"genre_scores_gemma":[0.99960375,0.000026100866,0.0002726059,0.000031729352,0.000008548789,0.00000673846,0.000027575023,0.000010846991,0.000012093938],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99908185,0.00007675801,0.0002521809,0.00019916025,0.00016364643,0.00022641098],"domain_scores_gemma":[0.99924695,0.00021681469,0.00014837441,0.00015533871,0.0001395298,0.000093016315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002599733,0.00013852847,0.0005445602,0.00006407682,0.00003660122,0.0000033139995,0.000023055043,0.00005465584,0.000003028338],"category_scores_gemma":[0.00016429991,0.00010580804,0.000043716485,0.00008389246,0.00021080776,0.0001311325,0.000038208946,0.000083731495,2.2166411e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006850472,0.0019661102,0.9765292,0.0007808192,0.00006886889,0.000012780467,0.00068174966,1.6335524e-7,0.019075459,0.00003119793,0.0000068230756,0.00016181511],"study_design_scores_gemma":[0.0021791777,0.0006027144,0.8586686,0.0004446951,0.00014096162,0.000014390525,0.00052835414,0.000010279247,0.13730855,0.00001008222,6.286098e-7,0.000091525835],"about_ca_topic_score_codex":0.00007124083,"about_ca_topic_score_gemma":0.00023717257,"teacher_disagreement_score":0.1182331,"about_ca_system_score_codex":0.000016589334,"about_ca_system_score_gemma":0.00003873026,"threshold_uncertainty_score":0.43147263},"labels":[],"label_agreement":null},{"id":"W2583467547","doi":"10.1128/msphere.00019-17","title":"Global Population Genetic Analysis of Aspergillus fumigatus","year":2017,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Aspergillus fumigatus; Biology; Microsatellite; Genetic diversity; Gene flow; Genetic variation; Population; Genetics; Fungal pathogen; Gene; Evolutionary biology; Microbiology; Allele; Medicine","score_opus":0.016773594313583464,"score_gpt":0.322711136491206,"score_spread":0.30593754217762253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2583467547","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9854085,0.00043654707,0.00026213803,0.0001066763,0.000057825662,0.00008330581,0.000019448808,0.000014726134,0.013610857],"genre_scores_gemma":[0.9981329,0.00003118014,0.0008304639,0.00003921844,0.000040070314,0.0000012576047,0.000018682174,0.000004091496,0.0009021372],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993197,0.000014212769,0.00018028186,0.00017168718,0.00019554619,0.000118579286],"domain_scores_gemma":[0.999055,0.000008013906,0.000116436706,0.0006745652,0.00007808574,0.00006784661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000067210676,0.00007017596,0.00029137288,0.000017904333,0.00010139939,0.000015329248,0.00009537899,0.000066949564,0.0005587761],"category_scores_gemma":[0.00013607416,0.00005844787,0.00018203126,0.0001523984,0.000067579436,0.000044433964,0.000028302979,0.000038548096,0.00001357561],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008455013,0.00004063111,0.98116237,0.00003153713,0.0002704523,0.0000116150895,0.000017851029,0.00004710799,0.0002917762,0.00015434339,0.00010639232,0.017781375],"study_design_scores_gemma":[0.0002707207,0.000048485937,0.99757135,0.000024540965,0.0008464114,0.0000010362191,0.00004508217,0.00067717646,0.00006537284,0.00017377238,0.00022382374,0.00005222607],"about_ca_topic_score_codex":0.0013574427,"about_ca_topic_score_gemma":0.0049916003,"teacher_disagreement_score":0.017729148,"about_ca_system_score_codex":0.000058913654,"about_ca_system_score_gemma":0.000029218347,"threshold_uncertainty_score":0.61182064},"labels":[],"label_agreement":null},{"id":"W2584493087","doi":"10.1007/s10096-017-2922-y","title":"Serious fungal infections in Canada","year":2017,"lang":"en","type":"article","venue":"European Journal of Clinical Microbiology & Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Public Health Ontario; McGill University Health Centre; Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Cryptococcosis; Epidemiology; Allergic bronchopulmonary aspergillosis; Aspergillosis; Medical microbiology; Medicine; Pneumonia; Population; Mycosis; Immunology; Internal medicine; Environmental health","score_opus":0.02720486809445899,"score_gpt":0.33518187650584613,"score_spread":0.30797700841138714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2584493087","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924742,0.0005638052,0.00003234619,0.00060101977,0.0014427581,0.00012555251,0.00003657151,0.000014139798,0.0047096307],"genre_scores_gemma":[0.9979172,0.00042235001,0.000023606375,0.00088918087,0.000572983,6.2969315e-7,0.000005311827,0.000020192101,0.00014860058],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997287,0.0008046712,0.0013098648,0.00024017543,0.00007770537,0.00028059163],"domain_scores_gemma":[0.99755543,0.0004166844,0.0009155437,0.0004935141,0.00027803623,0.00034077006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011762215,0.0001646063,0.00074810704,0.00008416664,0.0002252237,0.00003294519,0.0002605862,0.00006167481,0.00016529029],"category_scores_gemma":[0.005045122,0.00012910202,0.00039958995,0.000059413003,0.0003835957,0.00012283398,0.000093760675,0.00081952044,0.0000422265],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042310293,0.0004964424,0.98237413,0.000024246046,0.00013283626,0.0016234412,0.000008638164,0.000008612795,0.00062965375,0.00000894778,0.003218169,0.011051787],"study_design_scores_gemma":[0.00291105,0.00096659263,0.98332953,0.00013443908,0.00014162752,0.00092990475,0.00003124521,0.0000018514193,0.000024839714,0.000028819102,0.011385381,0.00011472837],"about_ca_topic_score_codex":0.020808097,"about_ca_topic_score_gemma":0.33910674,"teacher_disagreement_score":0.31829864,"about_ca_system_score_codex":0.0001928654,"about_ca_system_score_gemma":0.0022001914,"threshold_uncertainty_score":0.9857124},"labels":[],"label_agreement":null},{"id":"W2586160715","doi":"10.1093/jpids/piw087","title":"Posaconazole Plasma Monitoring in Immunocompromised Children","year":2016,"lang":"en","type":"article","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Posaconazole; Medicine; Plasma concentration; Hematopoietic stem cell transplantation; Plasma levels; Hematopoietic cell; Internal medicine; Stem cell; Transplantation; Haematopoiesis; Antifungal; Itraconazole","score_opus":0.006005103169340939,"score_gpt":0.24043596832905964,"score_spread":0.2344308651597187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2586160715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973586,0.0013275337,0.000030480214,0.0003388898,0.0005939943,0.00020970438,0.000014583076,0.00001924624,0.000106928834],"genre_scores_gemma":[0.99630654,0.001917872,0.000040915253,0.00006347303,0.0014554115,0.0000032673138,3.5528694e-7,0.0000141899245,0.00019800403],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987737,0.00006460139,0.00044038723,0.00012823341,0.00036092248,0.00023216468],"domain_scores_gemma":[0.998987,0.00014589174,0.00033091148,0.00023590068,0.0001692794,0.00013100557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026711647,0.00012855398,0.00028834149,0.000051880223,0.00011224899,0.000015820366,0.00015958078,0.0000814882,0.000049281414],"category_scores_gemma":[0.00026144323,0.00006638196,0.0007410128,0.0003128987,0.00006873581,0.00014951164,0.000056394943,0.00027969526,0.000007874177],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013880632,0.00029568924,0.99529296,0.000033985198,0.0000869334,0.0000057321413,0.00008198048,0.000008495819,0.0016795828,0.000004214485,0.00090563076,0.001465974],"study_design_scores_gemma":[0.003380929,0.000119671306,0.99536353,0.00009308438,0.00028563367,0.00020854828,0.00006133575,0.0000044929843,0.00020716098,0.00013963945,0.00004851473,0.00008746945],"about_ca_topic_score_codex":0.000012995727,"about_ca_topic_score_gemma":0.0000016809155,"teacher_disagreement_score":0.0032421225,"about_ca_system_score_codex":0.00036569592,"about_ca_system_score_gemma":0.00036194015,"threshold_uncertainty_score":0.27069777},"labels":[],"label_agreement":null},{"id":"W2586430873","doi":"10.1111/jcpt.12493","title":"The influence of combination use of CYP450 inducers on the pharmacokinetics of voriconazole: a systematic review","year":2017,"lang":"en","type":"review","venue":"Journal of Clinical Pharmacy and Therapeutics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"College of Pharmacy, University of Kentucky; University of Kentucky","keywords":"Voriconazole; Pharmacokinetics; Pharmacology; Medicine; Antifungal; Dermatology","score_opus":0.4381197484669572,"score_gpt":0.5511562527814282,"score_spread":0.11303650431447099,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2586430873","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01524413,0.98257613,0.00000544138,0.0005323944,0.00024982597,0.0013199787,0.0000223571,0.0000018259478,0.000047890364],"genre_scores_gemma":[0.091039844,0.9081214,0.000013735093,0.0006576689,0.00008191099,0.0000052783885,0.0000013968947,0.000017182387,0.00006154834],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99316615,0.0012511003,0.0045558587,0.00014758042,0.0007362791,0.00014305941],"domain_scores_gemma":[0.98072,0.0082892105,0.00909105,0.00067170715,0.0011220798,0.00010594943],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0065675923,0.00026271673,0.0037444562,0.00006837247,0.00008988751,0.000019506402,0.0005376555,0.00014271369,0.000007978171],"category_scores_gemma":[0.0045049703,0.00011362845,0.001134472,0.00016500425,0.0006882519,0.00010084086,0.00005719155,0.0012260318,0.000001006574],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006434712,0.00076049473,0.0011075193,0.6985833,0.0031425864,0.000012461944,0.00005745574,0.0000010462196,0.000026414713,0.00048190434,0.00021731477,0.294966],"study_design_scores_gemma":[0.0018073446,0.00091110024,0.0015708846,0.6162913,0.0226663,0.00006172122,0.000024261535,0.000031680516,0.000050876617,0.0001836678,0.35622862,0.00017227055],"about_ca_topic_score_codex":0.0000030616557,"about_ca_topic_score_gemma":4.8207494e-7,"teacher_disagreement_score":0.3560113,"about_ca_system_score_codex":0.000025525576,"about_ca_system_score_gemma":0.00060171593,"threshold_uncertainty_score":0.5393196},"labels":[],"label_agreement":null},{"id":"W2587628614","doi":"10.1038/srep42537","title":"Multilocus sequence analyses reveal extensive diversity and multiple origins of fluconazole resistance in Candida tropicalis from tropical China","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Science Foundation of Hainan Province","keywords":"Biology; Candida tropicalis; Genetic diversity; Genetics; Locus (genetics); Genetic variation; Candida albicans; Genotype; Corpus albicans; Population; Gene; Demography","score_opus":0.060573013120235955,"score_gpt":0.3392695282900491,"score_spread":0.27869651516981314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2587628614","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99801064,0.00040320877,0.000061951614,0.0002969109,0.00060622534,0.00028250384,0.000042029013,0.000016553466,0.0002799964],"genre_scores_gemma":[0.99778885,0.000024198609,0.0011252987,0.000022847174,0.000042174357,0.0000023388754,0.000025014138,0.0000066052958,0.00096267427],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978158,0.000050765808,0.0004991552,0.00083101395,0.0005302649,0.00027303313],"domain_scores_gemma":[0.9977202,0.0000760966,0.0004024087,0.0013777444,0.00023411913,0.00018946579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034675104,0.00015155175,0.00051187264,0.000094379895,0.0008950746,0.00007271217,0.00016381472,0.000094474606,0.000040158673],"category_scores_gemma":[0.001810719,0.00012416403,0.00011516844,0.00013694819,0.0011460464,0.00022660324,0.0003380475,0.00018996348,0.0000018122223],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024920833,0.00009007694,0.9357637,0.000051894054,0.000023090975,0.0012531326,0.00090496143,0.0000014621173,0.061101425,0.000036060595,0.0003046341,0.00022032425],"study_design_scores_gemma":[0.0006504056,0.000028947632,0.9804391,0.00017169007,0.000057789155,0.000012893414,0.00013028782,0.000100498524,0.016248304,0.0013002228,0.0007442226,0.000115618575],"about_ca_topic_score_codex":0.010129706,"about_ca_topic_score_gemma":0.009914802,"teacher_disagreement_score":0.04485312,"about_ca_system_score_codex":0.00018479221,"about_ca_system_score_gemma":0.00016159524,"threshold_uncertainty_score":0.9964619},"labels":[],"label_agreement":null},{"id":"W2587873638","doi":"10.1182/blood.v118.21.4479.4479","title":"Safety and Efficacy of Posaconazole for the Treatment of Invasive Fungal Infections After Failure of One Prior Line of Therapy","year":2011,"lang":"en","type":"article","venue":"Blood","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia; Princess Margaret Cancer Centre; Leukemia & Lymphoma Society of Canada; Merck Canada Inc. (Canada); University of Alberta; Université de Montréal; University of Toronto; McMaster University","funders":"","keywords":"Posaconazole; Voriconazole; Medicine; Internal medicine; Fluconazole; Population; Amphotericin B; Neutropenia; Refractory (planetary science); Adverse effect; Aspergillosis; Surgery; Toxicity; Antifungal; Immunology; Biology; Dermatology","score_opus":0.03012663026974977,"score_gpt":0.26917122865925824,"score_spread":0.23904459838950848,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2587873638","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968481,0.0019598799,0.00011713124,0.00008041982,0.000013221234,0.000760285,0.00010389355,0.0000037920431,0.00011325293],"genre_scores_gemma":[0.99778455,0.001478088,0.00058989716,0.000011152045,0.000024601553,0.000020330117,0.0000048764396,0.0000068927075,0.00007958611],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99941117,0.00001938839,0.00029555475,0.00010451755,0.00009200751,0.00007738636],"domain_scores_gemma":[0.9991204,0.0002807692,0.00014284979,0.0002457886,0.0001806925,0.000029494362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009265638,0.00007780581,0.00032970548,0.000032332842,0.000020529813,5.923533e-7,0.000032873606,0.00005139399,0.00007556426],"category_scores_gemma":[0.000070295595,0.000046615067,0.00013358275,0.000070718095,0.00017186918,0.000019807854,0.000008017217,0.00003147402,2.2333262e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007907766,0.013281704,0.7994186,0.00043379658,0.0011882357,0.0000018343703,0.005287523,7.586705e-7,0.16319601,0.00023525562,0.0000076312945,0.009040866],"study_design_scores_gemma":[0.005381961,0.0035785076,0.6260978,0.000067683584,0.00035578205,0.000001425726,0.00018891953,0.000001290365,0.36420503,0.000026831274,0.00006756261,0.000027216496],"about_ca_topic_score_codex":0.00010935752,"about_ca_topic_score_gemma":0.0002999853,"teacher_disagreement_score":0.20100904,"about_ca_system_score_codex":0.000006675021,"about_ca_system_score_gemma":0.00008275065,"threshold_uncertainty_score":0.19009073},"labels":[],"label_agreement":null},{"id":"W2589036275","doi":"10.1039/c6mt00301j","title":"Iron acquisition in fungal pathogens of humans","year":2017,"lang":"en","type":"review","venue":"Metallomics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Vancouver Biotech (Canada); University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Chung-Ang University","keywords":"Biology; Microbiology; Chemistry","score_opus":0.1214435031202088,"score_gpt":0.4016615159278487,"score_spread":0.2802180128076399,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2589036275","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0034998634,0.99142814,0.00002839731,0.000007761437,0.00016360499,0.0006796099,0.000098035955,0.000014674515,0.0040799156],"genre_scores_gemma":[0.004232396,0.9932206,0.00034961582,0.000018130764,0.00012986304,0.000021834127,0.00020963089,0.000040492716,0.0017774103],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982423,0.00010961411,0.0007652949,0.00039512673,0.00024607748,0.00024159228],"domain_scores_gemma":[0.9983331,0.000064790605,0.0004872575,0.000970486,0.000068143374,0.00007620809],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006519584,0.00029385102,0.0023250417,0.00018906794,0.000048610153,0.000014609237,0.0002232882,0.00038956368,0.00010350539],"category_scores_gemma":[0.00017765956,0.00023454329,0.0007766733,0.00010124326,0.0001351596,0.00005820959,0.00006684292,0.00040384015,0.000047518253],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000901976,0.00033145177,0.0018168468,0.045069348,0.0001804867,0.00019745411,0.00008044267,3.337469e-7,0.00012542272,0.00039483086,0.000119533346,0.95159364],"study_design_scores_gemma":[0.0006446909,0.0002208034,0.007400837,0.014796957,0.0024716733,0.000036355526,0.000036609286,0.0000062520935,0.00001481142,0.000120985394,0.9738597,0.0003902955],"about_ca_topic_score_codex":0.000024919987,"about_ca_topic_score_gemma":0.00009961597,"teacher_disagreement_score":0.9737402,"about_ca_system_score_codex":0.00017442375,"about_ca_system_score_gemma":0.00038973556,"threshold_uncertainty_score":0.95643973},"labels":[],"label_agreement":null},{"id":"W2591737678","doi":"10.1016/j.jpba.2017.03.009","title":"Ultra-fast quantitation of voriconazole in human plasma by coated blade spray mass spectrometry","year":2017,"lang":"en","type":"article","venue":"Journal of Pharmaceutical and Biomedical Analysis","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Voriconazole; Chemistry; Chromatography; Analyte; Mass spectrometry; Human plasma; Extraction (chemistry); Sample preparation; Calibration curve; Relative standard deviation; Antifungal; Detection limit; Analytical Chemistry (journal); Microbiology","score_opus":0.029547425942829542,"score_gpt":0.37378566750222186,"score_spread":0.3442382415593923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2591737678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944079,0.0004526014,0.001875936,0.0027831483,0.000057929283,0.00006237763,0.000024523031,0.0000039020206,0.0003317103],"genre_scores_gemma":[0.99865377,0.0004923805,0.00046598687,0.000090825364,0.00010441169,4.6834984e-7,0.00001717403,0.0000055028268,0.00016946132],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980132,0.00007849075,0.0008197367,0.00019136544,0.000664486,0.00023274311],"domain_scores_gemma":[0.99865943,0.00013722591,0.0004642352,0.00016284047,0.00017213837,0.00040415747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092494074,0.00013145269,0.00074968097,0.00045862256,0.00010574096,0.000032686417,0.00017611246,0.00013248455,0.00043300833],"category_scores_gemma":[0.00042937865,0.000089376976,0.00030288668,0.0005765037,0.0006023744,0.00014325249,0.000022920342,0.0004509459,0.0000025166773],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042842844,0.00052663486,0.2865169,0.000093367205,0.0006517442,0.00009757758,0.000037686186,5.743724e-7,0.71013856,0.000061117345,0.00031134058,0.0011360758],"study_design_scores_gemma":[0.00533438,0.00095610874,0.67340195,0.0001807111,0.0036068342,0.000040778257,0.00042105233,0.0020896785,0.31228346,0.00023856826,0.001238346,0.00020812158],"about_ca_topic_score_codex":0.00004713593,"about_ca_topic_score_gemma":0.000022754166,"teacher_disagreement_score":0.39785507,"about_ca_system_score_codex":0.00005304323,"about_ca_system_score_gemma":0.00006000924,"threshold_uncertainty_score":0.47411376},"labels":[],"label_agreement":null},{"id":"W2592596297","doi":"10.1128/msphere.00056-17","title":"Staurosporine Induces Filamentation in the Human Fungal Pathogen Candida albicans via Signaling through Cyr1 and Protein Kinase A","year":2017,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Government of Canada; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Staurosporine; Filamentation; Candida albicans; Virulence; Biology; Corpus albicans; Phenotypic switching; Microbiology; Fungal protein; Pathogen; Virulence factor; Cell biology; Signal transduction; Yeast; Protein kinase C; Phenotype; Genetics; Gene; Saccharomyces cerevisiae","score_opus":0.03696148957810639,"score_gpt":0.32684641459213,"score_spread":0.2898849250140236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2592596297","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99452406,0.00030315688,0.000060885824,0.00062653335,0.000024856932,0.0006463029,0.000015488726,0.000015021208,0.003783718],"genre_scores_gemma":[0.9983277,0.000013288476,0.00028879903,0.00020659436,0.000107591295,0.00004627807,0.000019215333,0.000011865525,0.0009786767],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999035,0.00006398735,0.00020312569,0.00025736337,0.00023921437,0.00020132062],"domain_scores_gemma":[0.99934304,0.000026127582,0.00011563511,0.00042576418,0.00004172709,0.000047705926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003293902,0.00012596161,0.00019646293,0.0000112460175,0.0003801469,0.00008213689,0.0001338327,0.00006629367,0.00021813919],"category_scores_gemma":[0.00009038691,0.000085863125,0.000040070507,0.00005151169,0.00013769507,0.00018818238,0.000036586367,0.00021472048,0.0000046208047],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016352287,0.00014665976,0.5231898,0.00014950652,0.000018934885,0.0002593644,0.0029111456,9.037195e-7,0.4675681,0.00029516386,0.00014699654,0.0051498953],"study_design_scores_gemma":[0.0013765221,0.00029959856,0.9771703,0.0002712029,0.00004301531,0.000010154987,0.0037218484,0.000015832553,0.014892546,0.0011562814,0.0008913136,0.00015136672],"about_ca_topic_score_codex":0.0022877513,"about_ca_topic_score_gemma":0.004300296,"teacher_disagreement_score":0.45398054,"about_ca_system_score_codex":0.000048355178,"about_ca_system_score_gemma":0.00005359964,"threshold_uncertainty_score":0.35013965},"labels":[],"label_agreement":null},{"id":"W2592962347","doi":"10.3747/co.24.3522","title":"Successful Treatment of Gastrointestinal Mucormycosis in an Adult with Acute LeukemiA: Case Report and Literature Review","year":2017,"lang":"en","type":"article","venue":"Current Oncology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"","keywords":"Mucormycosis; Medicine; Presentation (obstetrics); Antifungal; Debridement (dental); Surgical debridement; Intensive care medicine; Acute leukemia; Leukemia; Surgery; Dermatology; Internal medicine","score_opus":0.06077193238552911,"score_gpt":0.4194794286906511,"score_spread":0.358707496305122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2592962347","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98583484,0.012657154,0.000021184998,0.000544656,0.00007321936,0.00048093233,0.000022765918,0.000010238399,0.0003549898],"genre_scores_gemma":[0.9778578,0.021013875,0.0008272052,0.000045258428,0.0000673705,0.00004085936,0.00005909568,0.000008368781,0.000080121674],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99892414,0.000059655744,0.000363299,0.0003506553,0.00011022689,0.00019201082],"domain_scores_gemma":[0.99857396,0.000042250715,0.0003102942,0.00061804324,0.0003084438,0.00014701701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017674491,0.00015693688,0.0006063233,0.000049160077,0.00008009023,0.000014687199,0.000065634624,0.00006132849,0.000017846218],"category_scores_gemma":[0.00022408337,0.00010177489,0.000056585548,0.0000645325,0.00023552787,0.00013597941,0.000026970392,0.00018526486,0.0000010024787],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006040684,0.0005556408,0.8096808,0.0010172215,0.000021398771,0.1586434,0.00017510547,3.4283474e-8,0.00012528997,0.000021306383,0.00011306658,0.029042665],"study_design_scores_gemma":[0.0045284163,0.00962516,0.60815626,0.011908011,0.0006424013,0.36271393,0.00026586757,0.00006073717,0.00020339688,0.000025411622,0.0016797424,0.0001906643],"about_ca_topic_score_codex":0.00012615265,"about_ca_topic_score_gemma":0.0026193832,"teacher_disagreement_score":0.20407054,"about_ca_system_score_codex":0.00028748353,"about_ca_system_score_gemma":0.0003911061,"threshold_uncertainty_score":0.41502595},"labels":[],"label_agreement":null},{"id":"W2593619436","doi":"10.3389/fmicb.2017.00298","title":"Antifungal Drug Susceptibility of Candida Species Isolated from HIV-Positive Patients Recruited at a Public Hospital in São Luís, Maranhão, Brazil","year":2017,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Fundação de Amparo à Pesquisa e ao Desenvolvimento Científico e Tecnológico do Maranhão","keywords":"Human immunodeficiency virus (HIV); Antifungal; Microbiology; Drug; Medicine; Drug resistance; Antifungal drugs; Traditional medicine; Biology; Virology; Pharmacology","score_opus":0.009620195198373425,"score_gpt":0.24425530789609898,"score_spread":0.23463511269772555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2593619436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944369,0.0005948976,0.00009866254,0.0006897781,0.0011799479,0.0009708168,0.0012845283,0.00002628423,0.00071819336],"genre_scores_gemma":[0.99562746,0.00016229785,0.0009114611,0.00013291299,0.00005689309,0.0000130245135,0.0015089258,0.000027311475,0.001559729],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972171,0.00025021983,0.0008294992,0.00088763743,0.00013409926,0.0006814175],"domain_scores_gemma":[0.99794966,0.00010956999,0.00046019498,0.0010736018,0.00026930418,0.00013765764],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004759745,0.00034687918,0.0011407743,0.00028756994,0.00019044701,0.000031270145,0.00047843446,0.00040905434,0.00034082265],"category_scores_gemma":[0.0007756669,0.00031986125,0.00020659466,0.00021318978,0.001133333,0.00023097607,0.00030397068,0.0005191013,0.000025217269],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002203526,0.0007087235,0.9192802,0.00005652842,0.00010684766,0.00004909428,0.0010801881,2.3675241e-7,0.055787865,0.0000062551476,0.020159956,0.0005605909],"study_design_scores_gemma":[0.004555888,0.00034316114,0.98606765,0.00019639786,0.00004064805,0.0000023432276,0.0006141967,0.000042479525,0.0067777494,0.00009947579,0.00096889155,0.00029112658],"about_ca_topic_score_codex":0.0014494002,"about_ca_topic_score_gemma":0.01564228,"teacher_disagreement_score":0.06678745,"about_ca_system_score_codex":0.0007475417,"about_ca_system_score_gemma":0.00019204321,"threshold_uncertainty_score":0.9999254},"labels":[],"label_agreement":null},{"id":"W2594558897","doi":"10.1182/blood.v108.11.2021.2021","title":"Empirical Versus Pre-Emptive Antifungal Therapy in High-Risk Febrile Neutropenic Patients: An Economic Analysis.","year":2006,"lang":"en","type":"article","venue":"Blood","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Medicine; Neutropenia; Febrile neutropenia; Internal medicine; Mucositis; Randomized controlled trial; Pneumonia; Septic shock; Surgery; Intensive care medicine; Chemotherapy; Sepsis","score_opus":0.015585679415264833,"score_gpt":0.29315459732206434,"score_spread":0.2775689179067995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2594558897","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978629,0.00022393605,0.000017025946,0.000050554787,0.00012657976,0.00041625343,0.00007891913,0.00005352326,0.0011703344],"genre_scores_gemma":[0.9988977,0.00012811834,0.00017210202,0.000081357226,0.00021316142,0.000017821743,0.0002684017,0.000023329769,0.00019801389],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982147,0.00016944473,0.00044779517,0.00058808964,0.00021575978,0.000364193],"domain_scores_gemma":[0.99899,0.00010769871,0.00013762426,0.0005655219,0.00007461054,0.00012457109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025047734,0.00021523958,0.00056414265,0.00020107222,0.000079659265,0.000033768076,0.00013935225,0.0001373228,0.00032322327],"category_scores_gemma":[0.0000447685,0.00018345742,0.00023739884,0.0003794487,0.00009685635,0.00019627517,0.00003127767,0.00026335535,0.00006834928],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020588674,0.0022088955,0.99407685,0.0000063812017,0.00035216947,0.000017559852,0.00009900638,0.00011753594,0.00022198155,0.000039047107,0.00024004918,0.0005616681],"study_design_scores_gemma":[0.011946934,0.0014919412,0.9842545,0.000008497086,0.00063389697,5.139552e-7,0.000056009325,0.00015949608,0.001029939,0.000060521892,0.00017104033,0.00018674866],"about_ca_topic_score_codex":0.0035991068,"about_ca_topic_score_gemma":0.0066350787,"teacher_disagreement_score":0.009888067,"about_ca_system_score_codex":0.00013820456,"about_ca_system_score_gemma":0.00013264833,"threshold_uncertainty_score":0.7481176},"labels":[],"label_agreement":null},{"id":"W2595300774","doi":"10.1182/blood.v114.22.1018.1018","title":"A Prospective Study of Voriconazole Therapeutic Drug Monitoring (TDM) in Patients with Acute Leukemia.","year":2009,"lang":"en","type":"article","venue":"Blood","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University Health Network; Princess Margaret Cancer Centre","funders":"","keywords":"Medicine; Voriconazole; Internal medicine; Therapeutic drug monitoring; Aspergillosis; Gastroenterology; Prospective cohort study; Fluconazole; Neutropenia; Toxicity; Surgery; Pharmacokinetics; Immunology; Antifungal","score_opus":0.00825458677644774,"score_gpt":0.25592648033069443,"score_spread":0.24767189355424668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2595300774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984249,0.000119142394,0.0000029994612,0.000015442589,0.000023685223,0.0007973457,0.0000018922557,0.000020917852,0.0005936912],"genre_scores_gemma":[0.999702,0.00000684803,0.00007361007,0.000020044612,0.000031222622,0.000012455837,0.0000015538773,0.000008430464,0.00014383544],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990923,0.000025046795,0.00019554398,0.0002239033,0.00029790623,0.00016529398],"domain_scores_gemma":[0.9995097,0.00001801809,0.00006260865,0.00025282428,0.00011220699,0.000044636516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090841415,0.00010939642,0.00028400563,0.00005766975,0.000028138847,0.000005207141,0.0000603519,0.00003060124,0.0000048490115],"category_scores_gemma":[0.0000134575985,0.00007865088,0.00003036065,0.00023544375,0.00002276855,0.00006551348,0.000010583936,0.00015274445,0.000002326046],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079964986,0.0053679044,0.9902134,0.000014019275,0.00012703157,0.00002743811,0.0019135226,0.0000012386143,0.00072690484,0.000009282741,0.0000019519496,0.00079764234],"study_design_scores_gemma":[0.009767394,0.002344781,0.98208624,0.00007230066,0.0002122432,7.415486e-7,0.0010010164,0.0000015023754,0.004381887,0.00005430003,8.9885276e-7,0.00007669],"about_ca_topic_score_codex":0.000049794657,"about_ca_topic_score_gemma":0.00003549398,"teacher_disagreement_score":0.008967744,"about_ca_system_score_codex":0.0000864502,"about_ca_system_score_gemma":0.00008447859,"threshold_uncertainty_score":0.320729},"labels":[],"label_agreement":null},{"id":"W2599075710","doi":"10.1128/jcm.02524-16","title":"<i>In Vitro</i> Antifungal Susceptibility of Yeast and Mold Phases of Isolates of Dimorphic Fungal Pathogen Emergomycesafricanus (Formerly Emmonsia sp.) from HIV-Infected South African Patients","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Posaconazole; Etest; Anidulafungin; Caspofungin; Voriconazole; Itraconazole; Biology; Flucytosine; Microbiology; Candida parapsilosis; Amphotericin B; Fluconazole; Candida krusei; Candida albicans; Antimicrobial","score_opus":0.031659580225862696,"score_gpt":0.3266702245644298,"score_spread":0.2950106443385671,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2599075710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99729156,0.00042797477,0.000035139958,0.00016677991,0.00035172777,0.0002705785,0.0013361434,0.000004032556,0.00011605429],"genre_scores_gemma":[0.9987735,0.0001619097,0.00078279397,0.00005200311,0.00014543986,7.9762236e-7,0.00003893102,0.00001683909,0.00002778205],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99564743,0.0003874655,0.0030641037,0.000405067,0.00016210001,0.00033385024],"domain_scores_gemma":[0.9938219,0.00078197964,0.0036848106,0.00066795276,0.00082629453,0.00021702507],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014574855,0.000259856,0.0022285245,0.00016301431,0.00006015401,0.000008293433,0.00036326447,0.00036111355,0.00013230136],"category_scores_gemma":[0.003694281,0.00019349187,0.00059406983,0.00012494484,0.0014656978,0.00017933063,0.00014653144,0.0006393176,0.0000021990936],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005926489,0.0010101224,0.58117485,0.00007607082,0.00014705201,0.000018083905,0.00016079443,2.8508137e-7,0.41039756,0.0000024954722,0.00008759506,0.0009986224],"study_design_scores_gemma":[0.0057339757,0.0030798796,0.94993436,0.0002575237,0.0003016321,0.000023921588,0.00022892005,0.000010341834,0.04005421,0.000121773606,0.00010706809,0.00014639963],"about_ca_topic_score_codex":0.00019601862,"about_ca_topic_score_gemma":0.0001654006,"teacher_disagreement_score":0.37034336,"about_ca_system_score_codex":0.000030366307,"about_ca_system_score_gemma":0.0003387675,"threshold_uncertainty_score":0.7890369},"labels":[],"label_agreement":null},{"id":"W2603871746","doi":"10.1016/j.healun.2018.06.008","title":"Clinical risk factors for invasive aspergillosis in lung transplant recipients: Results of an international cohort study","year":2018,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Hazard ratio; Lung transplantation; Internal medicine; Aspergillosis; Confidence interval; Proportional hazards model; Univariate analysis; Retrospective cohort study; Cohort; Cystic fibrosis; Transplantation; Cohort study; Risk factor; Surgery; Multivariate analysis; Immunology","score_opus":0.029679524807503015,"score_gpt":0.364949488034734,"score_spread":0.33526996322723096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2603871746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984341,0.000052820174,0.0004181944,0.00014917068,0.0002588083,0.00053211616,0.00010541654,0.0000032459775,0.00004607649],"genre_scores_gemma":[0.99766386,0.0018107247,0.0002964135,0.00003159568,0.0001430409,0.0000019508666,0.000032354925,0.0000066782586,0.000013356885],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99844474,0.00025755746,0.00078392396,0.00012701392,0.00028642738,0.000100327576],"domain_scores_gemma":[0.99862856,0.00067064445,0.000252976,0.00011839032,0.00026145883,0.00006798092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023831874,0.00008641686,0.00031684522,0.000108463464,0.00006862056,0.000007098447,0.000084637366,0.000058760543,0.000010844669],"category_scores_gemma":[0.00019481003,0.00005296538,0.0000940072,0.00008283611,0.00010989351,0.00019456493,0.0000027101626,0.00019755059,2.2438856e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015108423,0.0004056579,0.9763301,0.000050986582,0.0001786781,0.0000062561203,0.006259131,0.0000076272113,0.001425904,0.000003058556,0.000042404587,0.00018174961],"study_design_scores_gemma":[0.004239412,0.002392665,0.98875356,0.00025864167,0.0006881594,0.000032742013,0.001458646,0.0003983243,0.0016962715,0.000021191863,0.000008951519,0.000051437004],"about_ca_topic_score_codex":0.00019083281,"about_ca_topic_score_gemma":0.001116904,"teacher_disagreement_score":0.012423434,"about_ca_system_score_codex":0.000029368835,"about_ca_system_score_gemma":0.00006593107,"threshold_uncertainty_score":0.21598656},"labels":[],"label_agreement":null},{"id":"W2604637964","doi":"10.4049/jimmunol.1601572","title":"Antibody-Independent Function of Human B Cells Contributes to Antifungal T Cell Responses","year":2017,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Notre-Dame; University of Toronto; Centre Hospitalier de l’Université de Montréal; McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Candida albicans; CD80; Biology; Immunology; T cell; B cell; Immune system; CD86; Corpus albicans; Priming (agriculture); Naive B cell; CD40; Cytotoxic T cell; Antibody; Antigen-presenting cell; Microbiology; In vitro","score_opus":0.021326601752612286,"score_gpt":0.32223088623087937,"score_spread":0.30090428447826706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2604637964","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944514,0.0016614469,0.0010469558,0.0009935672,0.00054749835,0.00017216764,0.000006310065,0.0000051228967,0.0011155437],"genre_scores_gemma":[0.9976193,0.00033707087,0.000048716167,0.00013704204,0.00009138375,4.3420792e-7,0.000001581819,0.0000098757755,0.001754623],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987019,0.00021795346,0.00054368796,0.000097865755,0.00022801611,0.00021061536],"domain_scores_gemma":[0.99784905,0.00021284698,0.0007173901,0.000668482,0.00049904187,0.000053181167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015577542,0.00011249437,0.00048251683,0.0001361623,0.00031395417,0.000018731576,0.000398575,0.00011191842,0.00010938157],"category_scores_gemma":[0.0004295037,0.000069685586,0.00016083231,0.000053731368,0.00033648132,0.00009548761,0.00010123649,0.0003845177,0.000024464567],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007969346,0.00017234751,0.049465463,0.000030297468,0.00017280097,0.000035489986,0.00015341445,0.0000015942892,0.94098973,0.00009924668,0.00045409403,0.0004561516],"study_design_scores_gemma":[0.0012077019,0.0017009217,0.594824,0.000094862626,0.00017386924,0.000046774472,0.00045164698,7.9439656e-7,0.4006406,0.00018510925,0.0006317217,0.000041965523],"about_ca_topic_score_codex":0.000057243447,"about_ca_topic_score_gemma":0.000023891198,"teacher_disagreement_score":0.5453586,"about_ca_system_score_codex":0.000052573265,"about_ca_system_score_gemma":0.00014792959,"threshold_uncertainty_score":0.28416955},"labels":[],"label_agreement":null},{"id":"W2604839281","doi":"10.3389/fimmu.2017.00281","title":"Antifungal Immunological Defenses in Newborns","year":2017,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Children's Hospital","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; March of Dimes Foundation","keywords":"Context (archaeology); Immune system; Biology; Antifungal; Immunology; Vulnerability (computing); Microbiology; Computer science","score_opus":0.08330475327237498,"score_gpt":0.37282452501215974,"score_spread":0.28951977173978477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2604839281","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00086903037,0.99144256,0.0000782379,0.000059509624,0.0021215621,0.0011245946,0.00003133312,0.000059903286,0.004213256],"genre_scores_gemma":[0.00067179167,0.9946809,0.0015214963,0.000038520586,0.00010842978,0.00011417016,0.00015122074,0.000060967803,0.0026525462],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9962488,0.0004754188,0.0012275685,0.0009508128,0.00019777573,0.0008996665],"domain_scores_gemma":[0.99759704,0.00016872777,0.0004675011,0.0016305754,0.0000612317,0.00007490694],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.000620186,0.0006263268,0.004629662,0.00086488615,0.00011342643,0.000035208817,0.000753467,0.0016687703,0.0001374729],"category_scores_gemma":[0.0011832862,0.000503895,0.0007317568,0.00036967458,0.00093522615,0.00011195205,0.00026477705,0.0022222071,0.00013462825],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031313417,0.0002738194,0.022254342,0.0028307093,0.00029578342,0.0009372488,0.000043138385,4.624606e-8,0.000004111966,0.00010263288,0.0019707398,0.97097427],"study_design_scores_gemma":[0.0010323464,0.00025038954,0.03048715,0.008694001,0.00027758477,0.00016314162,0.00013061418,0.0000013775643,0.000001819966,0.00022801613,0.95831895,0.00041462772],"about_ca_topic_score_codex":0.000116352654,"about_ca_topic_score_gemma":0.0001125835,"teacher_disagreement_score":0.97055966,"about_ca_system_score_codex":0.000664817,"about_ca_system_score_gemma":0.0008894249,"threshold_uncertainty_score":0.99974126},"labels":[],"label_agreement":null},{"id":"W2606196206","doi":"10.1093/mmy/myx017","title":"Diabetes mellitus as the major risk factor for mucormycosis in Mexico: Epidemiology, diagnosis, and outcomes of reported cases","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":197,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Universidad Nacional Autónoma de México; Sick Kids Foundation; Wellcome Trust","keywords":"Mucormycosis; Epidemiology; Diabetes mellitus; Risk factor; Medicine; Intensive care medicine; Internal medicine; Surgery; Endocrinology","score_opus":0.060352455069831654,"score_gpt":0.3849286850694249,"score_spread":0.32457622999959324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606196206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9758139,0.00307555,0.000033888336,0.019826256,0.0002543218,0.00074570946,0.000097048025,0.000016459382,0.00013686782],"genre_scores_gemma":[0.99520046,0.002221864,0.00021435913,0.001957089,0.000067680776,0.00022147928,0.000009271677,0.00001202627,0.00009574643],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99784076,0.0003250374,0.0007949452,0.00039690497,0.00021163259,0.00043073375],"domain_scores_gemma":[0.9860209,0.012445086,0.00048719556,0.00071748806,0.000094150986,0.00023515514],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0025366957,0.00016830057,0.0010456677,0.000063294574,0.00021678535,0.000006050215,0.0002444928,0.00037268753,0.00052815117],"category_scores_gemma":[0.13991894,0.0000953782,0.00016956942,0.000047624795,0.0013521436,0.000045595574,0.00012855537,0.00036938253,0.0000052526298],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001951863,0.0001909873,0.9782779,0.000098430886,0.00017058662,0.000078701305,0.000092789436,3.404983e-8,0.00006936162,0.00029631788,0.0007071446,0.019822514],"study_design_scores_gemma":[0.0014061319,0.00062228285,0.9916482,0.000073790456,0.00019137742,0.000022916172,0.00007859892,0.00006197114,0.00078332506,0.0026653332,0.0023594617,0.00008659727],"about_ca_topic_score_codex":0.0012138778,"about_ca_topic_score_gemma":0.0024796515,"teacher_disagreement_score":0.13738224,"about_ca_system_score_codex":0.000037102887,"about_ca_system_score_gemma":0.00018161457,"threshold_uncertainty_score":0.8673259},"labels":[],"label_agreement":null},{"id":"W2606308655","doi":"10.1128/jcm.00254-17","title":"Antifungal Susceptibility Testing of Aspergillus spp. by Using a Composite Correlation Index (CCI)-Based Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry Method Appears To Not Offer Benefit over Traditional Broth Microdilution Testing","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Public Health Ontario; University Health Network","funders":"","keywords":"Voriconazole; Aspergillus fumigatus; Aspergillus; Microbiology; Broth microdilution; Matrix-assisted laser desorption/ionization; Biology; Mass spectrometry; Chromatography; Chemistry; Antifungal; Minimum inhibitory concentration; Desorption; Antibiotics","score_opus":0.08806901252621253,"score_gpt":0.3779008619589548,"score_spread":0.28983184943274226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606308655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9098692,0.00006261922,0.08889269,0.0002443961,0.00031723088,0.00036297494,0.00018369086,0.000013397638,0.00005381876],"genre_scores_gemma":[0.86379254,0.000004561828,0.13563883,0.00016157524,0.00024000402,7.5675933e-7,0.000079159465,0.000023907716,0.000058641886],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9957214,0.0005247552,0.00266835,0.00046815674,0.0002880958,0.0003292354],"domain_scores_gemma":[0.9923372,0.0021193132,0.0032481398,0.000485296,0.0015948826,0.00021515905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034172102,0.0002668414,0.0013614744,0.000287931,0.00022741352,0.000031804717,0.00027895108,0.00047175438,0.00023169302],"category_scores_gemma":[0.0064670937,0.00023293759,0.0004700422,0.00040856784,0.0004326464,0.0002207082,0.00006064973,0.0006937546,0.000010774439],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002004833,0.00044059384,0.42860392,0.000089507295,0.00009218115,0.0000070561123,0.000008181952,0.0009340691,0.5667413,0.00000641402,0.00009035236,0.0009816056],"study_design_scores_gemma":[0.003452092,0.0014199329,0.8927821,0.0006877826,0.00032922628,0.00017190656,0.00001263409,0.013506711,0.0873156,0.000091270245,0.000034260982,0.00019651807],"about_ca_topic_score_codex":0.000075883116,"about_ca_topic_score_gemma":0.000016881413,"teacher_disagreement_score":0.4794257,"about_ca_system_score_codex":0.0002472965,"about_ca_system_score_gemma":0.0004520204,"threshold_uncertainty_score":0.94989187},"labels":[],"label_agreement":null},{"id":"W2606931784","doi":"10.1128/msphere.00120-17","title":"Discovery of a Novel Antifungal Agent in the Pathogen Box","year":2017,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Deutsche Forschungsgemeinschaft; University of British Columbia; Medicines for Malaria Venture; Government of Canada","keywords":"Cryptococcus neoformans; Candida albicans; Antifungal; Human pathogen; Pathogen; Fungal pathogen; Potency; Microbiology; Biology; Cryptococcus; Human immunodeficiency virus (HIV); Antifungal drugs; Virology; Bacteria; In vitro","score_opus":0.043775018107480156,"score_gpt":0.3190852887898737,"score_spread":0.27531027068239355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606931784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9765654,0.0003541208,0.00026200965,0.00056141336,0.00007676932,0.00022542136,0.000026598836,0.000005915332,0.021922305],"genre_scores_gemma":[0.9970413,0.000049882332,0.00025214336,0.00018874597,0.00007006854,0.0000060904295,0.000005076676,0.0000074025493,0.002379299],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992289,0.000023875647,0.00018668304,0.00016937006,0.000234369,0.00015682525],"domain_scores_gemma":[0.99899703,0.000040013892,0.00009611075,0.0008066492,0.000034773497,0.000025401432],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033882912,0.00008370467,0.00020791174,0.000010153326,0.000095146075,0.000038622486,0.0002323596,0.000054831315,0.0000611942],"category_scores_gemma":[0.0002375916,0.00005052771,0.00010375746,0.00004144834,0.00013905749,0.00012561327,0.00004973671,0.00013874986,0.000011786985],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021902213,0.0004557692,0.90161026,0.00013132044,0.000019048151,0.000078952784,0.0004574279,9.3395226e-7,0.092373714,0.0006511941,0.0010970052,0.0029053465],"study_design_scores_gemma":[0.0008539379,0.00008539798,0.99473906,0.00016164602,0.000025737247,0.00000658021,0.00079840387,0.000030469246,0.0020518801,0.00007138835,0.001116447,0.00005903559],"about_ca_topic_score_codex":0.0001769669,"about_ca_topic_score_gemma":0.00083549763,"teacher_disagreement_score":0.093128815,"about_ca_system_score_codex":0.000021633534,"about_ca_system_score_gemma":0.000073449904,"threshold_uncertainty_score":0.20604603},"labels":[],"label_agreement":null},{"id":"W2607192512","doi":"10.1007/s10096-005-0069-8","title":"International, open-label, noncomparative, clinical trial of micafungin alone and in combination for treatment of newly diagnosed and refractory candidemia","year":2006,"lang":"en","type":"article","venue":"European Journal of Clinical Microbiology & Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Micafungin; Refractory (planetary science); Medical microbiology; Medicine; Echinocandins; Echinocandin; Open label; Intensive care medicine; Clinical trial; Internal medicine; Antifungal; Voriconazole; Dermatology; Caspofungin; Virology","score_opus":0.07854901624693716,"score_gpt":0.42331034967426734,"score_spread":0.3447613334273302,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2607192512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99696726,0.0013244962,0.00010159075,0.00025193157,0.00043525503,0.00049224537,0.00007891635,0.0000044167336,0.00034388094],"genre_scores_gemma":[0.9964283,0.0026487221,0.00040377586,0.00009780918,0.0002884534,0.0000034224893,0.000043302236,0.000011751005,0.00007446974],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99649143,0.0009732433,0.0021254022,0.00023863658,0.00005383316,0.00011743619],"domain_scores_gemma":[0.9956841,0.0025522616,0.0012008786,0.00013788417,0.00030902517,0.00011588537],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015796154,0.00013366119,0.0011201834,0.00011193817,0.00002877148,0.000010808878,0.0001097487,0.00008269427,0.0000146892935],"category_scores_gemma":[0.0019576629,0.000099558165,0.00019950187,0.00006470203,0.00050468364,0.000089456946,0.000047051595,0.00014690775,8.192107e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.056571167,0.009552945,0.91315025,0.000036163103,0.00024211037,0.000049189865,0.000024261213,0.0000020324426,0.0048526046,0.000025689877,0.0011132007,0.014380411],"study_design_scores_gemma":[0.1498868,0.017930688,0.82550603,0.00015156838,0.00026047323,0.000025524281,0.00002107906,0.000009318512,0.00011735873,0.00008440097,0.0059302296,0.000076522156],"about_ca_topic_score_codex":0.00004250008,"about_ca_topic_score_gemma":0.0001052433,"teacher_disagreement_score":0.09331564,"about_ca_system_score_codex":0.000044757686,"about_ca_system_score_gemma":0.00018693626,"threshold_uncertainty_score":0.40598643},"labels":[],"label_agreement":null},{"id":"W2608315524","doi":"10.14740/jocmr2992w","title":"Combination Antifungal Therapy: A Review of Current Data","year":2017,"lang":"en","type":"review","venue":"Journal of Clinical Medicine Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Antifungal; Medicine; Intensive care medicine; Immunosuppression; Invasive candidiasis; Clinical trial; Antifungal drugs; Disease; Immunology; Fluconazole; Internal medicine; Dermatology","score_opus":0.9201328310652512,"score_gpt":0.7580998176083833,"score_spread":0.16203301345686794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2608315524","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000019218003,0.99267274,0.000024624467,0.0021865533,0.0013708185,0.0014624256,0.000041043204,0.000005206262,0.0022173459],"genre_scores_gemma":[0.00009605985,0.9955818,0.00007232027,0.0000972398,0.003483569,0.000006082635,0.00014166567,0.000043608823,0.00047761865],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98477423,0.003317746,0.0068017202,0.0006086331,0.0040399814,0.0004577079],"domain_scores_gemma":[0.9755767,0.008301811,0.0060653575,0.0038904252,0.005429287,0.00073642307],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.07060662,0.00036026747,0.008672282,0.00059253117,0.0001257732,0.000018652554,0.0024058262,0.0004521866,0.00057615025],"category_scores_gemma":[0.09916492,0.00019123917,0.0013777516,0.00059196586,0.0017315677,0.00021960886,0.0004951983,0.0057217497,0.000035481233],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024411158,0.00072841597,0.00074966316,0.16708617,0.0003339084,0.000109680725,0.0000055494575,3.2413505e-10,3.1707737e-7,0.000041801195,0.08080778,0.7498926],"study_design_scores_gemma":[0.0012386907,0.0019839553,0.0007907703,0.40337294,0.00080747396,0.00009033835,0.000007916265,0.0000011673131,2.3137484e-7,0.000066640576,0.5915646,0.00007529128],"about_ca_topic_score_codex":0.000009997991,"about_ca_topic_score_gemma":0.0000019938318,"teacher_disagreement_score":0.7498173,"about_ca_system_score_codex":0.0001116236,"about_ca_system_score_gemma":0.0063301995,"threshold_uncertainty_score":0.999303},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"systematic_review","genre":"review","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"design_other","genre":"review","about_ca_system":false,"about_ca_topic":false,"confidence":"low"}],"label_agreement":"split"},{"id":"W2608385659","doi":"10.1146/annurev-micro-030117-020345","title":"Molecular Evolution of Antifungal Drug Resistance","year":2017,"lang":"en","type":"review","venue":"Annual Review of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":447,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Cryptococcus neoformans; Aspergillus fumigatus; Drug resistance; Antifungal drug; Candida albicans; Antifungal; Biology; Antifungal drugs; Drug; Microbiology; Fluconazole; Pharmacology","score_opus":0.028626412529541775,"score_gpt":0.3686939095860915,"score_spread":0.3400674970565497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2608385659","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000037640868,0.9945266,0.0000338637,0.00010319563,0.00019321198,0.0013800842,0.00084271486,0.000015450443,0.0028672258],"genre_scores_gemma":[0.00020839913,0.9958762,0.0002984786,0.00010601185,0.00005978219,0.000024869643,0.0004699581,0.00003972061,0.0029165777],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.9966422,0.0004903738,0.001720525,0.00063261535,0.0001532604,0.00036104524],"domain_scores_gemma":[0.9954614,0.00017212219,0.0019812253,0.0016126741,0.00068007293,0.000092508584],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012337101,0.00046471893,0.005328189,0.00015074854,0.000056038916,0.0000028635502,0.00055953674,0.00042998279,0.00012416385],"category_scores_gemma":[0.0012991566,0.00034205115,0.0015938964,0.0002166543,0.0006853981,0.000056006636,0.00015742201,0.00048445794,0.00006563834],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006210992,0.0001633638,0.000038826918,0.7583455,0.0003977128,0.00005348976,0.000017588605,3.4490517e-9,0.0011073268,0.0007423358,0.023861732,0.21520999],"study_design_scores_gemma":[0.00013625057,0.00006672224,0.000018728819,0.26350117,0.0014232093,0.000060700808,0.0000077468885,7.293861e-9,0.000112416696,0.000015836498,0.73448235,0.00017484037],"about_ca_topic_score_codex":0.000018975868,"about_ca_topic_score_gemma":0.000020086003,"teacher_disagreement_score":0.71062064,"about_ca_system_score_codex":0.00015660028,"about_ca_system_score_gemma":0.0011765865,"threshold_uncertainty_score":0.99990314},"labels":[],"label_agreement":null},{"id":"W2617456826","doi":"10.1128/aac.02518-16","title":"An Immunomodulatory Peptide Confers Protection in an Experimental Candidemia Murine Model","year":2017,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Fundação de Apoio ao Desenvolvimento do Ensino, Ciência e Tecnologia do Estado de Mato Grosso do Sul; Canadian Institutes of Health Research; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Fundación Ramón Areces","keywords":"Microbiology; Candida albicans; Biology; Monocyte; Corpus albicans; Cytokine; Cytotoxic T cell; Tumor necrosis factor alpha; Immune system; Immunology; In vitro; Biochemistry","score_opus":0.03498560411847031,"score_gpt":0.32998249829845916,"score_spread":0.29499689417998887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2617456826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984614,0.000018938848,0.00012436647,0.0005308008,0.000056332887,0.00043709946,0.000007636282,0.00002839229,0.00033498643],"genre_scores_gemma":[0.9971234,0.00012873377,0.00031385067,0.0018722999,0.00007830817,0.000010049233,0.000020168,0.000025929956,0.00042721632],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990732,0.00002277346,0.00020331622,0.00036729992,0.000104781255,0.00022863699],"domain_scores_gemma":[0.9992423,0.0000018824933,0.000090690635,0.0005049533,0.000039054466,0.00012108471],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014715367,0.00016706524,0.00026500886,0.000046536534,0.00027277274,0.00008735798,0.0001225733,0.00011186185,0.000083474144],"category_scores_gemma":[0.0000059882527,0.00014948704,0.000055372602,0.000021385227,0.00017210282,0.00036232275,0.000020178943,0.00015852168,0.0000031396705],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010938188,0.0005750424,0.3233454,0.000038315462,0.000021740014,0.000017848148,0.00086310686,0.000018174635,0.67027193,0.000020486468,0.0003893858,0.0033447975],"study_design_scores_gemma":[0.003855479,0.00042838234,0.88913405,0.00009420511,0.000012559327,0.000012427869,0.00022389948,0.009710384,0.09582178,0.00003729273,0.00043352591,0.00023600229],"about_ca_topic_score_codex":0.0007537993,"about_ca_topic_score_gemma":0.0002778732,"teacher_disagreement_score":0.57445014,"about_ca_system_score_codex":0.00007301973,"about_ca_system_score_gemma":0.000067121284,"threshold_uncertainty_score":0.6095904},"labels":[],"label_agreement":null},{"id":"W2619798408","doi":"10.1093/jpids/pix030","title":"Risk Factors for Invasive Fungal Disease in Pediatric Cancer and Hematopoietic Stem Cell Transplantation: A Systematic Review","year":2017,"lang":"en","type":"review","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":149,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Clinical Evaluative Sciences; SickKids Foundation; Hospital for Sick Children; Pediatric Oncology Group","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; Astellas Pharma; National Institute for Health and Care Research; Merck","keywords":"Medicine; Hematopoietic stem cell transplantation; Neutropenia; Transplantation; Pediatric cancer; Risk factor; Disease; MEDLINE; Cancer; Intensive care medicine; Internal medicine; Oncology; Chemotherapy","score_opus":0.03138560257107854,"score_gpt":0.32492839487846586,"score_spread":0.29354279230738733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2619798408","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.023107117,0.97145057,0.000021159063,0.000036759022,0.0004900466,0.004109414,0.0007606297,0.000015816424,0.000008483838],"genre_scores_gemma":[0.028755214,0.9698615,0.000006119056,0.00007794425,0.0008315232,0.00023952182,0.000015418133,0.000056950576,0.00015577902],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9964914,0.0004141342,0.0017138687,0.00039023816,0.00062849466,0.00036186192],"domain_scores_gemma":[0.9931059,0.0014699296,0.0039880564,0.0006242055,0.00036508773,0.00044683195],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00082508725,0.00055182975,0.0033565855,0.00014437684,0.00038293295,0.000074335156,0.00038224217,0.00024232858,0.000010343612],"category_scores_gemma":[0.0008943867,0.00031501983,0.0038737352,0.00044334235,0.00009219843,0.00018216125,0.00006055329,0.00081797206,0.0000020343718],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024659705,0.00016414945,0.3484617,0.650157,0.0001744793,0.00002374434,0.00016055601,0.0000018140557,4.8446034e-9,8.3954825e-7,0.0005566399,0.0002744801],"study_design_scores_gemma":[0.0037526574,0.00044363507,0.048566833,0.545739,0.397947,0.0006966598,0.00028603539,0.000010069494,1.3488132e-7,0.000120647695,0.0012102493,0.0012270533],"about_ca_topic_score_codex":0.000019210196,"about_ca_topic_score_gemma":0.000018133731,"teacher_disagreement_score":0.39777252,"about_ca_system_score_codex":0.0005054011,"about_ca_system_score_gemma":0.0029741656,"threshold_uncertainty_score":0.9999302},"labels":[],"label_agreement":null},{"id":"W2698205240","doi":"10.1073/pnas.1702798114","title":"Microbial glycoside hydrolases as antibiofilm agents with cross-kingdom activity","year":2017,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children; McGill University; McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Government of Canada","keywords":"Biofilm; Microbiology; Aspergillus fumigatus; Pseudomonas aeruginosa; Virulence; Antimicrobial; Biology; Fungus; Glycoside hydrolase; Bacteria; Aspergillus; Enzyme; Biochemistry","score_opus":0.07076207060546881,"score_gpt":0.3830968343966939,"score_spread":0.3123347637912251,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2698205240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97493535,0.000016075106,3.5779388e-7,0.0022211296,0.000016737307,0.00019442508,0.0000134917545,0.000008996018,0.022593454],"genre_scores_gemma":[0.99859273,0.000013573106,0.0004063722,0.00023213237,0.000076496726,0.000001823406,8.819441e-8,0.0000041496774,0.00067263306],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982359,0.0000035870546,0.00019922225,0.0002937717,0.0010939917,0.00017356184],"domain_scores_gemma":[0.9989758,0.00005587956,0.00055389886,0.0000240296,0.00033833736,0.000052014326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008673707,0.000102428574,0.00021293505,0.00006719271,0.0006450626,0.000075107935,0.00066089095,0.00008118447,0.000031723204],"category_scores_gemma":[0.0012357129,0.000059476894,0.00009434704,0.00017636183,0.0024167073,0.0006652346,0.00014204835,0.00018359222,0.000003289766],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003056118,0.000080662205,0.4474606,0.00008151417,0.000017944287,5.3249092e-8,0.000033955723,0.0000025131178,0.5495095,0.0020526943,0.00031263864,0.00014228826],"study_design_scores_gemma":[0.00027977346,0.00008036677,0.54907984,0.00014301723,0.000014349806,0.0000110181845,0.000013362789,0.00007997621,0.44854206,0.0016262932,0.00008900081,0.00004091978],"about_ca_topic_score_codex":0.000048685142,"about_ca_topic_score_gemma":6.8361624e-7,"teacher_disagreement_score":0.10161926,"about_ca_system_score_codex":0.000037926406,"about_ca_system_score_gemma":0.00010071937,"threshold_uncertainty_score":0.8904459},"labels":[],"label_agreement":null},{"id":"W2731448244","doi":"10.1111/mmi.13738","title":"Negative regulation of filamentous growth in <i>Candida albicans</i> by Dig1p","year":2017,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; McGill University","funders":"National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; National Institute of General Medical Sciences; Canada Research Chairs; Burroughs Wellcome Fund","keywords":"Biology; Candida albicans; Microbiology","score_opus":0.006291282394335768,"score_gpt":0.25413737352140386,"score_spread":0.2478460911270681,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2731448244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99485826,0.00024576124,0.00047108775,0.00046851352,0.000046597037,0.00024744237,0.000045011344,0.000008333777,0.003608996],"genre_scores_gemma":[0.9985746,0.000028592003,0.00025479394,0.0003462511,0.000009717186,0.0000059772724,0.00008654181,0.000009541376,0.00068399165],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992221,0.00006179657,0.00022806594,0.00025206638,0.00004545004,0.0001905314],"domain_scores_gemma":[0.99931145,0.000028818922,0.00015297275,0.00038838698,0.000078867495,0.000039508108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013039968,0.00010404373,0.0003022433,0.000044182834,0.00005327539,0.0000073424158,0.0001266348,0.0001236723,0.000094402836],"category_scores_gemma":[0.00023012017,0.000092352544,0.00007357881,0.000045501056,0.00031347878,0.000037920214,0.000048575403,0.000115118324,0.000008278406],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020427063,0.00008192585,0.048027016,0.00003362993,0.00002535827,0.000021238404,0.000079454614,3.923836e-7,0.94987226,0.00021938422,0.0010946722,0.00034039523],"study_design_scores_gemma":[0.001241045,0.00018822843,0.2108062,0.000060426424,0.000023914627,0.000011977894,0.00003261083,0.000006304861,0.7858396,0.00049447146,0.00120457,0.00009063516],"about_ca_topic_score_codex":0.000388203,"about_ca_topic_score_gemma":0.0001164925,"teacher_disagreement_score":0.16403265,"about_ca_system_score_codex":0.00005462562,"about_ca_system_score_gemma":0.000048424026,"threshold_uncertainty_score":0.37660274},"labels":[],"label_agreement":null},{"id":"W2733112879","doi":"10.1099/jmmcr.0.005100","title":"Marked peripheral eosinophilia due to prolonged administration of posaconazole","year":2017,"lang":"en","type":"article","venue":"JMM Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Shared Health; University of Manitoba","funders":"","keywords":"Posaconazole; Medicine; Eosinophilia; Abdominal pain; Eosinophil; Voriconazole; Mucormycosis; Surgery; Internal medicine; Dermatology; Gastroenterology; Antifungal","score_opus":0.021824676479742643,"score_gpt":0.32670322356525294,"score_spread":0.3048785470855103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2733112879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98983157,0.00004372789,0.000056009878,0.000928055,0.00018855378,0.0005623397,0.000008369396,0.000025883402,0.008355478],"genre_scores_gemma":[0.99654293,0.0000025393017,0.00049437827,0.000103744074,0.00011864413,0.00002095885,0.00001371105,0.000012358393,0.0026907644],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99880564,0.000022882597,0.00042802075,0.00031169027,0.0002552163,0.00017653627],"domain_scores_gemma":[0.9983054,0.000015596883,0.0003077794,0.00100858,0.00018014201,0.00018254502],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041342765,0.00011545613,0.00032092934,0.00003311864,0.00017994938,0.000035750207,0.000035009503,0.00008866012,0.00019455983],"category_scores_gemma":[0.00065327546,0.00009980163,0.00010920477,0.000038043127,0.00009440054,0.00012192214,0.000035680587,0.00010448406,0.000005518617],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002175978,0.00043329954,0.39942095,0.00035934578,0.000078704456,0.5341716,0.00038607346,9.020836e-7,0.052641623,0.000071980474,0.0018930895,0.008366499],"study_design_scores_gemma":[0.00037564314,0.000521695,0.90779424,0.0001030811,0.00007592696,0.07127059,0.00009674808,0.000031827843,0.018005382,0.00011606374,0.0014768426,0.00013196311],"about_ca_topic_score_codex":0.00013385467,"about_ca_topic_score_gemma":0.0004841092,"teacher_disagreement_score":0.50837326,"about_ca_system_score_codex":0.000054259133,"about_ca_system_score_gemma":0.00023097725,"threshold_uncertainty_score":0.40697926},"labels":[],"label_agreement":null},{"id":"W2734115378","doi":"10.1007/s12281-017-0287-4","title":"Update on Therapeutic Drug Monitoring of Antifungals for the Prophylaxis and Treatment of Invasive Fungal Infections","year":2017,"lang":"en","type":"article","venue":"Current Fungal Infection Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Astellas Pharma US; Pfizer","keywords":"Posaconazole; Therapeutic drug monitoring; Voriconazole; Medicine; Drug; Pharmacology; Intensive care medicine; Itraconazole; Population; Antifungal; Dermatology","score_opus":0.06856080955002625,"score_gpt":0.36624911631173873,"score_spread":0.2976883067617125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2734115378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993673,0.002507123,0.00019740444,0.0001475846,0.0018068088,0.0014048363,0.000022343167,0.000032272954,0.00020861036],"genre_scores_gemma":[0.9962603,0.003074238,0.000025986235,0.000006100991,0.00028920377,0.00013893789,0.000008174319,0.000018343151,0.00017874734],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985521,0.000050962473,0.0005563719,0.00037140277,0.00026348786,0.00020571616],"domain_scores_gemma":[0.9976133,0.00030702061,0.00074959965,0.0008567674,0.00038351337,0.00008980884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003729805,0.00021556354,0.0004506265,0.00010866379,0.0005618082,0.000045132078,0.000050153325,0.000079883896,0.000019895208],"category_scores_gemma":[0.00052411325,0.0001395636,0.00027895984,0.00009037275,0.00029072328,0.00014168862,0.00003133043,0.00015699925,0.0000016951274],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024571153,0.00075344957,0.93650347,0.00028651874,0.00018684103,0.000010466013,0.00019806737,0.000011651431,0.006030815,0.00011812123,0.00006339742,0.0555915],"study_design_scores_gemma":[0.0006520932,0.0014727591,0.9180899,0.00026717637,0.00028741139,0.00005988836,0.00006388002,0.000020489415,0.076866195,0.00015568573,0.0019527676,0.00011171705],"about_ca_topic_score_codex":0.00018756297,"about_ca_topic_score_gemma":0.000094743766,"teacher_disagreement_score":0.07083538,"about_ca_system_score_codex":0.000095989744,"about_ca_system_score_gemma":0.00016831774,"threshold_uncertainty_score":0.56912386},"labels":[],"label_agreement":null},{"id":"W2737323872","doi":"10.1016/j.diagmicrobio.2017.07.007","title":"In vitro potency and fungicidal activity of CD101, a novel echinocandin, against recent clinical isolates of Candida spp.","year":2017,"lang":"en","type":"article","venue":"Diagnostic Microbiology and Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Microsemi (Canada)","funders":"Cidara Therapeutics; Infectious Diseases Society of America","keywords":"Anidulafungin; Echinocandin; Echinocandins; Potency; Microbiology; Fluconazole; Medicine; Candida albicans; Candida parapsilosis; Pharmacology; Biology; Antifungal; Micafungin; Caspofungin; In vitro","score_opus":0.016399653004636187,"score_gpt":0.3038707857893788,"score_spread":0.2874711327847426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2737323872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996938,0.0015180759,0.000047037833,0.00038799414,0.00017904316,0.00035644538,0.00022866638,0.000008741476,0.00033600614],"genre_scores_gemma":[0.9949049,0.004678343,0.00002806811,0.0002669661,0.000043416985,0.000007375748,0.000028933166,0.000007796924,0.000034232802],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99897164,0.00006678838,0.0003789111,0.0003389555,0.00003355753,0.00021014792],"domain_scores_gemma":[0.9984125,0.00069857505,0.0002507637,0.00035494255,0.00009366465,0.0001895616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034374482,0.0001548816,0.0005512042,0.000072144336,0.000117760115,0.000008478249,0.0000656217,0.00016567984,0.000039402225],"category_scores_gemma":[0.00429917,0.00012799843,0.000093526505,0.000045559682,0.0007647355,0.00008745597,0.00008952084,0.00022551329,0.0000017860616],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001577943,0.00082419,0.7961421,0.0002048051,0.00005491731,0.000030839146,0.000039014245,3.981305e-7,0.1976801,0.00004556255,0.00010610101,0.0032940449],"study_design_scores_gemma":[0.0026542342,0.00037672732,0.9852695,0.00016376616,0.00013228165,0.000017163073,0.000016815156,0.000031814256,0.010836808,0.0001595588,0.00022009676,0.0001212674],"about_ca_topic_score_codex":0.00038642995,"about_ca_topic_score_gemma":0.0003856461,"teacher_disagreement_score":0.18912739,"about_ca_system_score_codex":0.00002573881,"about_ca_system_score_gemma":0.00017260657,"threshold_uncertainty_score":0.52196246},"labels":[],"label_agreement":null},{"id":"W2737946573","doi":"10.22317/jcms.v3i10.171","title":"Molecular and conventional methods for detection of Candida species isolated from a sample of immunocompromised Iraqi patients with pulmonary symptoms","year":2017,"lang":"en","type":"article","venue":"Journal of Contemporary Medical Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Al-Nahrain University; DNA Genotek","keywords":"Sample (material); Medicine; Pulmonary infection; Microbiology; Biology; Internal medicine; Chromatography; Chemistry","score_opus":0.03643022809242496,"score_gpt":0.3415859848904087,"score_spread":0.30515575679798373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2737946573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9656011,0.0013094317,0.032121785,0.0003698399,0.00012558828,0.0002277826,0.00002752352,0.0000020571024,0.00021488035],"genre_scores_gemma":[0.9949521,0.000038841423,0.0049152425,0.000030892963,0.000038482627,0.0000018436516,0.0000054399957,0.00000363934,0.000013542806],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984595,0.0000770726,0.00054438866,0.0001386159,0.0006771568,0.000103270904],"domain_scores_gemma":[0.9980325,0.00047389453,0.00086104753,0.00013594376,0.00034244856,0.00015417836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014270827,0.00008459858,0.0004445683,0.00007161341,0.00014365383,0.000018578792,0.00021041234,0.000060802806,0.000056783716],"category_scores_gemma":[0.0014545217,0.000051278883,0.000118098746,0.00007123128,0.0011266207,0.00024261151,0.00003358357,0.00012820376,4.7125027e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040751062,0.0003313686,0.8783784,0.000114681185,0.00020855719,0.000019179797,0.00008727622,4.9032496e-7,0.084317595,0.00012480453,0.000016650874,0.032325897],"study_design_scores_gemma":[0.004034537,0.0028202136,0.9662087,0.0007831381,0.00008361448,0.000013269293,0.00016178394,0.0010228175,0.02316085,0.0012853936,0.00034431493,0.00008139199],"about_ca_topic_score_codex":0.00029275444,"about_ca_topic_score_gemma":0.000017010067,"teacher_disagreement_score":0.08783028,"about_ca_system_score_codex":0.000016985037,"about_ca_system_score_gemma":0.0005040756,"threshold_uncertainty_score":0.41510808},"labels":[],"label_agreement":null},{"id":"W2739314464","doi":"10.1111/myc.12655","title":"Evidence of unique genetic diversity in <i>Aspergillus fumigatus</i> isolates from Cameroon","year":2017,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Aspergillus fumigatus; Biology; Voriconazole; Genetic diversity; Genotype; Population; Microsatellite; Genotyping; Microbiology; Itraconazole; Genetics; Antifungal; Allele; Medicine; Gene","score_opus":0.06321472655755794,"score_gpt":0.3101430081001989,"score_spread":0.24692828154264096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2739314464","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99501055,0.0033035784,0.0000523658,0.00028280233,0.00007368993,0.00016267814,0.000018047607,0.000016076801,0.0010801842],"genre_scores_gemma":[0.9976895,0.0014091916,0.00042778265,0.00013366078,0.00004009621,0.0000018822633,0.0000032257735,0.0000067903657,0.00028788112],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99918944,0.00003967599,0.00019280984,0.00024733803,0.00016474746,0.00016599643],"domain_scores_gemma":[0.99890405,0.00014412472,0.000114652874,0.00068156555,0.00008128563,0.00007433487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014264711,0.000102200414,0.0003019413,0.000035579367,0.00016977162,0.000014730945,0.00023931028,0.000080728976,0.00015612577],"category_scores_gemma":[0.00060681376,0.000088454355,0.00007589713,0.000047143418,0.00020314941,0.00014791718,0.00026134087,0.00013795268,0.000020794994],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003419579,0.00007264616,0.95008105,0.00007597735,0.00001606523,0.000045494,0.00032310063,0.0000013145055,0.046218522,0.000020641337,0.00017154394,0.0026316731],"study_design_scores_gemma":[0.00038967258,0.00013972895,0.9720488,0.00067380763,0.000040342493,0.0000011733415,0.00013970323,0.000043586075,0.02585133,0.0005011302,0.000088867695,0.000081860824],"about_ca_topic_score_codex":0.007723971,"about_ca_topic_score_gemma":0.0034263055,"teacher_disagreement_score":0.021967733,"about_ca_system_score_codex":0.000054002427,"about_ca_system_score_gemma":0.00007183855,"threshold_uncertainty_score":0.99888366},"labels":[],"label_agreement":null},{"id":"W2741734701","doi":"10.1016/s1473-3099(17)30308-0","title":"Improvement of fungal disease identification and management: combined health systems and public health approaches","year":2017,"lang":"en","type":"review","venue":"The Lancet Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"Global Fund to Fight AIDS, Tuberculosis and Malaria","keywords":"Public health; Fungal disease; Disease; Medicine; Health care; Intensive care medicine; Procurement; Workforce; Environmental health; Business; Pathology; Economic growth","score_opus":0.19609939078991503,"score_gpt":0.38463700741462126,"score_spread":0.18853761662470622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2741734701","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00094317365,0.99352527,0.000066701294,0.0009309716,0.00017092693,0.0035550836,0.00048343895,0.000089849396,0.00023459128],"genre_scores_gemma":[0.12300658,0.87572265,0.0000027932088,0.00014594318,0.00019719622,0.00030806186,0.00029585508,0.00002975187,0.00029114416],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976934,0.00031076433,0.0007404418,0.00051196007,0.00032941025,0.00041402798],"domain_scores_gemma":[0.99701613,0.00010235273,0.0011146456,0.0012326478,0.0000622168,0.0004720349],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010155252,0.00032716664,0.0020006048,0.00013231224,0.00045731704,0.00017464925,0.00020057228,0.00006367398,0.0000036016872],"category_scores_gemma":[0.0001567397,0.00021078982,0.00021310372,0.00012550254,0.0003460621,0.00010530239,0.00015249154,0.00020449156,0.0000036063657],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007141516,0.00040708735,0.025349546,0.20513442,0.00047638058,0.000005641339,0.000048485606,1.5777704e-7,4.426464e-8,0.0033274523,0.0010196406,0.76415974],"study_design_scores_gemma":[0.003192484,0.0010745168,0.3110395,0.02825993,0.0035886194,0.000041672945,0.0004115995,0.00008337794,7.204116e-8,0.00060349674,0.6510165,0.0006882629],"about_ca_topic_score_codex":0.0001366531,"about_ca_topic_score_gemma":0.000037136517,"teacher_disagreement_score":0.7634715,"about_ca_system_score_codex":0.00019895817,"about_ca_system_score_gemma":0.0005579057,"threshold_uncertainty_score":0.8595759},"labels":[],"label_agreement":null},{"id":"W2742352005","doi":"10.1093/jac/dkx263","title":"Pharmacokinetics and safety results from the Phase 3 randomized, open-label, study of intravenous posaconazole in patients at risk of invasive fungal disease","year":2017,"lang":"en","type":"erratum","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juravinski Hospital","funders":"Merck","keywords":"Posaconazole; Pharmacokinetics; Medicine; Open label; Pharmacology; Adverse effect; Antifungal; Amphotericin B; Dermatology","score_opus":0.020511245185625377,"score_gpt":0.31422335268119306,"score_spread":0.2937121074955677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2742352005","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99130857,0.0013090064,0.0000053446574,0.0006676649,0.0017170889,0.002424965,0.0022883378,0.0000028230727,0.00027622818],"genre_scores_gemma":[0.97061634,0.02636541,0.00011102042,0.0004126067,0.0005709537,0.0000026152256,0.00021764543,0.00005673482,0.0016466632],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9958144,0.0006070935,0.0022261536,0.00042708725,0.00064663205,0.00027865544],"domain_scores_gemma":[0.9928919,0.0007686416,0.004558825,0.00077284616,0.0007926035,0.00021517434],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018399206,0.00044173212,0.0026527639,0.0001515859,0.0001678653,0.000055994136,0.00080277945,0.00026335253,0.000059247566],"category_scores_gemma":[0.0013403562,0.00028448578,0.00031012233,0.00011689606,0.0005711818,0.00015606859,0.00022424213,0.0012406657,8.6481805e-7],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.81051344,0.013501942,0.036195815,0.00024028352,0.0018610469,0.0001528615,0.0034879472,0.0000033245346,0.0047441116,3.7138534e-7,0.12630238,0.0029964945],"study_design_scores_gemma":[0.87111825,0.0032525337,0.11346264,0.0025651166,0.0022505594,0.000010422612,0.00025651063,0.00002677229,0.003649803,0.000029009365,0.0030417757,0.0003365798],"about_ca_topic_score_codex":0.000597309,"about_ca_topic_score_gemma":0.0003903199,"teacher_disagreement_score":0.1232606,"about_ca_system_score_codex":0.0001532525,"about_ca_system_score_gemma":0.0008497209,"threshold_uncertainty_score":0.9999607},"labels":[],"label_agreement":null},{"id":"W2743188665","doi":"10.1016/j.fgb.2017.08.002","title":"Depletion of the mitotic kinase Cdc5p in Candida albicans results in the formation of elongated buds that switch to the hyphal fate over time in a Ume6p and Hgc1p-dependent manner","year":2017,"lang":"en","type":"article","venue":"Fungal Genetics and Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université de Sherbrooke; Concordia University; McGill University; University of Ottawa","funders":"","keywords":"Hypha; Biology; Cell biology; Candida albicans; Mitosis; Yeast; Polo-like kinase; Fungal protein; Cell; Microbiology; Cell cycle; Saccharomyces cerevisiae; Genetics","score_opus":0.030693165533371435,"score_gpt":0.2952043385278323,"score_spread":0.26451117299446086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2743188665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99674433,0.00034117678,0.000011266942,0.0021583475,0.000048241076,0.0004476099,0.00005007127,0.0000012769219,0.00019769257],"genre_scores_gemma":[0.99940246,0.00027494464,0.000020741061,0.00016564057,0.00002149756,0.000011874555,0.000011849552,0.0000037507416,0.000087241104],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991305,0.00015666032,0.00028439605,0.00016763373,0.00010097366,0.00015987072],"domain_scores_gemma":[0.9993639,0.0000910234,0.00012934272,0.000351162,0.000038243987,0.00002632227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066225935,0.000088125,0.00019873875,0.000051968218,0.00006431131,0.000011426145,0.00014830449,0.00009541252,0.000004990535],"category_scores_gemma":[0.0001764031,0.000042489497,0.000026972004,0.00008382618,0.00015168855,0.000023396184,0.00008479547,0.00014562336,7.7051465e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074137066,0.00006606501,0.9626815,0.000040220202,0.0000073950555,0.000005451859,0.001147854,0.000017017423,0.032932345,0.000056609213,0.00007099181,0.002233184],"study_design_scores_gemma":[0.0011796948,0.00023172815,0.99339646,0.00007389815,0.000014928253,0.00000802193,0.00026322037,0.0008979271,0.0035705715,0.00013173162,0.00018231789,0.000049512862],"about_ca_topic_score_codex":0.0012373744,"about_ca_topic_score_gemma":0.018833103,"teacher_disagreement_score":0.030714953,"about_ca_system_score_codex":0.000022279708,"about_ca_system_score_gemma":0.000033702898,"threshold_uncertainty_score":0.99907064},"labels":[],"label_agreement":null},{"id":"W2745703813","doi":"10.71781/27778","title":"Identification of transcriptional regulators functions in the human fungal pathogen Candida albicans using functional genomics","year":2017,"lang":"en","type":"dissertation","venue":"Papyrus : Institutional Repository (Université de Montréal)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Génome Québec; Natural Sciences and Engineering Research Council of Canada; University College Dublin; McGill University","keywords":"Candida albicans; Identification (biology); Fungal pathogen; Biology; Computational biology; Functional genomics; Genomics; Pathogen; Microbiology; Opportunistic pathogen; Human pathogen; Genetics; Genome; Gene; Virulence; Ecology","score_opus":0.014600825617976671,"score_gpt":0.22083986294175395,"score_spread":0.20623903732377727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2745703813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843898,0.0029411388,0.00015825596,0.000096558855,0.0006156763,0.00052104105,0.00024480277,0.000024334586,0.011008388],"genre_scores_gemma":[0.9605895,0.00007363237,0.000043249856,0.000028923014,0.00019853176,0.000020833046,0.0015262972,0.000023056677,0.037495937],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976847,0.0001147534,0.00061577297,0.0005048715,0.000809569,0.0002703139],"domain_scores_gemma":[0.99825704,0.000051494862,0.00057363237,0.0006312341,0.00036040248,0.00012621052],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.00044211844,0.00029349953,0.00042413422,0.00031447745,0.0043261163,0.000040878404,0.00029216948,0.00037952262,0.00009038715],"category_scores_gemma":[0.00006132508,0.00027942075,0.00040663828,0.00020311083,0.0003117981,0.00022829186,0.000020975338,0.00048117046,0.0000070399315],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020657433,0.0005281085,0.17310147,0.00039424835,0.0003927903,0.000516251,0.01178544,0.0008760549,0.80094075,0.008245989,0.00033508198,0.0008180604],"study_design_scores_gemma":[0.0010364938,0.00007205409,0.9700126,0.00022166845,0.0006636978,0.0003275578,0.018939728,0.00033870636,0.003942523,0.00024239779,0.003930494,0.00027205335],"about_ca_topic_score_codex":0.009500567,"about_ca_topic_score_gemma":0.018149702,"teacher_disagreement_score":0.79699826,"about_ca_system_score_codex":0.0033944082,"about_ca_system_score_gemma":0.0024665117,"threshold_uncertainty_score":0.9999658},"labels":[],"label_agreement":null},{"id":"W2751938171","doi":"10.1038/s41467-017-00547-y","title":"The Candida albicans transcription factor Cas5 couples stress responses, drug resistance and cell cycle regulation","year":2017,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Institute of General Medical Sciences; Wellcome Trust; Canadian Institutes of Health Research; University of Rochester; Fundo para o Desenvolvimento das Ciências e da Tecnologia; Universidade de Macau; Creighton University; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Nebraska Department of Health and Human Services; U.S. Department of Health and Human Services","keywords":"Candida albicans; Antifungal drug; Transcription factor; Biology; Cell cycle; Echinocandins; Cell biology; Corpus albicans; Transcriptional regulation; Cell; Microbiology; Gene; Genetics; Antifungal","score_opus":0.020755273067581223,"score_gpt":0.3153208961305544,"score_spread":0.2945656230629732,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2751938171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92269903,0.033882305,0.000059084672,0.03395314,0.00014507094,0.0005974065,0.0002230568,0.00006434566,0.008376555],"genre_scores_gemma":[0.98164326,0.006076757,0.0007101384,0.00012541167,0.00004093713,0.00002456623,0.000072679875,0.000014831658,0.01129142],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998985,0.00015179397,0.00022531436,0.00021865354,0.00024042667,0.0001788343],"domain_scores_gemma":[0.9960076,0.00046873715,0.0001743722,0.0030329751,0.00022119941,0.00009511509],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0003529117,0.00012476846,0.00016818962,0.00003317312,0.0024167423,0.00014585638,0.00060461956,0.00017539023,0.000016344693],"category_scores_gemma":[0.0005053511,0.000091918526,0.00006755601,0.0000662909,0.00058397476,0.00016874171,0.00009156379,0.0007034073,0.000003600777],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00445865,0.00087535207,0.74747,0.00046211664,0.00023737416,0.000017070857,0.006869629,0.0000039758024,0.14758909,0.04123347,0.033775136,0.017008122],"study_design_scores_gemma":[0.0005086601,0.000015605176,0.90151054,0.00009647728,0.000056348854,0.0000019108038,0.00041515369,0.0001853174,0.0017652394,0.0003873412,0.09495093,0.00010649694],"about_ca_topic_score_codex":0.00021377164,"about_ca_topic_score_gemma":0.052620836,"teacher_disagreement_score":0.1540405,"about_ca_system_score_codex":0.00008867174,"about_ca_system_score_gemma":0.00013106994,"threshold_uncertainty_score":0.998882},"labels":[],"label_agreement":null},{"id":"W2752056382","doi":"10.14785/lymphosign-2017-0011","title":"Chronic mucocutaneous candidiasis: a spectrum of genetic disorders","year":2017,"lang":"en","type":"article","venue":"LymphoSign Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Chronic mucocutaneous candidiasis; Candida albicans; Mucocutaneous zone; Immunology; Immunodeficiency; Medicine; Biology; Immune system; Dermatology; Disease; Pathology; Genetics","score_opus":0.010332375789548404,"score_gpt":0.26853068086659815,"score_spread":0.2581983050770498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2752056382","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9865706,0.004647832,0.002166908,0.0014634212,0.00032824613,0.0001770081,0.0000043657647,0.000015299009,0.00462635],"genre_scores_gemma":[0.996462,0.0020183227,0.0004894087,0.00006242321,0.0005042694,0.0000021130056,7.438775e-7,0.000019074521,0.00044166797],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987809,0.000027578753,0.00034739173,0.00018078613,0.0003276815,0.00033564356],"domain_scores_gemma":[0.9987768,0.00002900475,0.00032458507,0.0005869475,0.00006207661,0.0002206173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002072741,0.00013793982,0.0003327801,0.000065692526,0.00038546292,0.00007599035,0.00026133453,0.00007797989,0.00043636447],"category_scores_gemma":[0.00016355615,0.0001096026,0.00021714387,0.000042425276,0.00023906169,0.00010854969,0.0000357031,0.00018530822,0.000024563844],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007380298,0.00021305647,0.8888381,0.0002029703,0.00025829938,0.0008237758,0.00042228503,0.000019286112,0.017790377,0.00018630222,0.0016557401,0.08885177],"study_design_scores_gemma":[0.0028401935,0.001180836,0.98241216,0.0003526412,0.00019177204,0.0023340608,0.00021410025,0.00024291183,0.0046617994,0.0033413847,0.0020267083,0.00020144873],"about_ca_topic_score_codex":0.00022080919,"about_ca_topic_score_gemma":0.0004972715,"teacher_disagreement_score":0.09357403,"about_ca_system_score_codex":0.00027164695,"about_ca_system_score_gemma":0.000684687,"threshold_uncertainty_score":0.4777885},"labels":[],"label_agreement":null},{"id":"W2752396176","doi":"10.1038/s41598-017-10954-2","title":"The influence of the mating type on virulence of Mucor irregularis","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Peking Union Medical College; Chinese Academy of Medical Sciences; National Natural Science Foundation of China","keywords":"Mating type; Biology; Virulence; Heterothallic; Locus (genetics); Genetics; Mating; Allele; Microbiology; Gene","score_opus":0.01992718563936941,"score_gpt":0.30232654158587013,"score_spread":0.28239935594650073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2752396176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950054,0.000056845416,0.000003102006,0.00028455514,0.0013845051,0.00021025272,9.569867e-7,0.000006031218,0.0030483124],"genre_scores_gemma":[0.9946518,0.0000054819834,0.00006581529,0.000019217849,0.000016128479,0.0000018742691,5.89003e-7,0.0000040000627,0.005235107],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986269,0.00002752317,0.0003749194,0.00026725914,0.0005655709,0.00013782059],"domain_scores_gemma":[0.9964351,0.00006506383,0.00066520256,0.0024223444,0.0003752369,0.000037020047],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017474017,0.0000622732,0.00014499392,0.000018445466,0.0007471859,0.00006353909,0.0002667125,0.000034757384,0.000016899216],"category_scores_gemma":[0.00364191,0.00003060216,0.000087103,0.00012807816,0.0011888794,0.00007391421,0.00010428963,0.00010410711,0.0000052954433],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010225012,0.00006956658,0.67227226,0.000116151976,0.000017125538,0.000034680652,0.0002955245,0.000034378252,0.3210069,0.00043516507,0.0015397667,0.0040762178],"study_design_scores_gemma":[0.00005269267,0.000046667432,0.9114351,0.00028816937,0.000017359404,0.000015055771,0.00008775201,0.00003340927,0.08448976,0.0016507473,0.001848412,0.00003484903],"about_ca_topic_score_codex":0.00006193825,"about_ca_topic_score_gemma":0.000050918992,"teacher_disagreement_score":0.23916285,"about_ca_system_score_codex":0.000017965347,"about_ca_system_score_gemma":0.00020130271,"threshold_uncertainty_score":0.57468253},"labels":[],"label_agreement":null},{"id":"W2754311586","doi":"10.1111/ajt.14500","title":"Voriconazole and squamous cell carcinoma after lung transplantation: A multicenter study","year":2017,"lang":"en","type":"article","venue":"American Journal of Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"Pfizer","keywords":"Medicine; Voriconazole; Hazard ratio; Immunosuppression; Internal medicine; Lung transplantation; Proportional hazards model; Transplantation; Retrospective cohort study; Confidence interval; Lung cancer; Confounding; Cohort study; Surgery; Dermatology","score_opus":0.009018126706122745,"score_gpt":0.2786761445425594,"score_spread":0.26965801783643667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2754311586","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970295,0.00021831879,0.0018448149,0.00023150517,0.00010885012,0.00024792156,0.00001865689,0.000005906233,0.00029451473],"genre_scores_gemma":[0.99874216,0.00027346818,0.000693793,0.000111255686,0.000097808006,0.00000501469,0.0000048005563,0.000013067358,0.000058648868],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989392,0.00007005579,0.00037877145,0.0001639161,0.00029533045,0.0001526887],"domain_scores_gemma":[0.9990589,0.00007338681,0.00036836174,0.00020332001,0.00015323007,0.00014277452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024180133,0.0001298512,0.00032565408,0.000093401744,0.00014739999,0.00005061385,0.000095657386,0.000026571955,0.000032691052],"category_scores_gemma":[0.000016720438,0.00010442245,0.00009812915,0.000046703066,0.0001729865,0.0002957776,0.000003982903,0.0001857438,0.0000026170019],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005721138,0.000323462,0.98195577,0.0002760542,0.00003062658,0.0011079573,0.005927084,0.0000018160486,0.001660793,0.0000017090426,0.000008596174,0.0029849978],"study_design_scores_gemma":[0.004408139,0.001491547,0.9894598,0.00007199741,0.0007028568,0.00021687735,0.002087883,0.000051589497,0.0013964117,0.000004412907,0.000007520264,0.00010096825],"about_ca_topic_score_codex":0.00014062967,"about_ca_topic_score_gemma":0.00012350391,"teacher_disagreement_score":0.007504031,"about_ca_system_score_codex":0.000032342636,"about_ca_system_score_gemma":0.0000619708,"threshold_uncertainty_score":0.4258224},"labels":[],"label_agreement":null},{"id":"W2755272162","doi":"10.1556/018.68.2017.3.10","title":"<i>In vitro</i> activity of calcium channel blockers in combination with conventional antifungal agents against clinically important filamentous fungi","year":2017,"lang":"en","type":"article","venue":"Acta Biologica Hungarica","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Research, Development and Innovation Office; Institute of Population and Public Health; Nemzeti Kutatási Fejlesztési és Innovációs Hivatal; King Saud University","keywords":"Amphotericin B; Itraconazole; Voriconazole; Broth microdilution; Pharmacology; Antifungal; Checkerboard; Verapamil; Caspofungin; Diltiazem; Minimum inhibitory concentration; Diltiazem hydrochloride; Microbiology; In vitro; Chemistry; Biology; Medicine; Calcium; Antibiotics; Internal medicine; Biochemistry","score_opus":0.04348472616544877,"score_gpt":0.32682177223162895,"score_spread":0.28333704606618015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2755272162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99590296,0.000081517544,0.000033309323,0.0014658149,0.00012956372,0.0006561475,0.00006431782,0.000023387973,0.0016430051],"genre_scores_gemma":[0.9983855,0.00028592875,0.00036156914,0.00038623848,0.000038771926,0.000026428717,0.000095796815,0.0000136575845,0.00040610883],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99774355,0.00013682728,0.000762546,0.000577378,0.00035430896,0.00042540638],"domain_scores_gemma":[0.99812955,0.00019012345,0.0007357199,0.00066927774,0.00014462089,0.00013072099],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009656309,0.00024265912,0.0007031949,0.000119171236,0.00015366642,0.00002646044,0.00030673284,0.00026995694,0.00007784037],"category_scores_gemma":[0.0006213337,0.0001772593,0.00017117837,0.00015271682,0.0004462753,0.00017764073,0.0001236229,0.0004472404,0.000005950468],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0048745912,0.0018726861,0.55199695,0.00007083763,0.00006775216,0.00017174984,0.00007166587,6.647352e-7,0.4394758,0.000026541724,0.0007259577,0.00064478465],"study_design_scores_gemma":[0.003600291,0.001096584,0.95851123,0.00013453625,0.000039059803,0.000006189215,0.00008851199,0.00044923168,0.035325628,0.00008693766,0.00045198083,0.00020980152],"about_ca_topic_score_codex":0.00016933355,"about_ca_topic_score_gemma":0.00009842849,"teacher_disagreement_score":0.4065143,"about_ca_system_score_codex":0.0001273961,"about_ca_system_score_gemma":0.00017585796,"threshold_uncertainty_score":0.7228424},"labels":[],"label_agreement":null},{"id":"W2757350427","doi":"10.1080/24745332.2017.1370679","title":"Isolated pleural aspergillosis: Case description and challenges in management","year":2017,"lang":"en","type":"article","venue":"Canadian Journal of Respiratory Critical Care and Sleep Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; St. Joseph's Hospital; University of Toronto","funders":"","keywords":"Aspergillosis; Intensive care medicine; Medicine; Pulmonary aspergillosis; Pleural fluid; Computer science; Pleural effusion; Immunology; Radiology","score_opus":0.1085924767032445,"score_gpt":0.3328221062968735,"score_spread":0.22422962959362897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2757350427","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87946206,0.1112087,0.000028108909,0.006191892,0.00021879892,0.00012260275,0.0000045981433,0.0000033744373,0.0027598378],"genre_scores_gemma":[0.9967932,0.0023024213,0.000072742565,0.0006156892,0.00018652045,0.0000017342544,6.977086e-7,0.000010253578,0.000016707063],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9989108,0.00006462566,0.00037438594,0.00019905897,0.00018026456,0.0002708797],"domain_scores_gemma":[0.9984105,0.000059232407,0.000072792536,0.00025927537,0.00028973748,0.00090841344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050245563,0.00013241416,0.00038614235,0.00027477564,0.00027074746,0.000041029634,0.00007933149,0.000106923115,0.000055116874],"category_scores_gemma":[0.0008367565,0.00010239496,0.00004417112,0.000043017983,0.00066182436,0.00020960113,0.000016132015,0.00031025597,9.084771e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064619555,0.00005406715,0.41328222,0.0031485525,0.00014084659,0.14370918,0.0048743696,3.457947e-7,0.00036083753,0.0049171047,0.0005303223,0.42833596],"study_design_scores_gemma":[0.005375031,0.0052579953,0.91711974,0.0028431292,0.0006912475,0.006929018,0.043207344,0.000058821613,0.00003917326,0.0005780556,0.01758201,0.00031845737],"about_ca_topic_score_codex":0.0007948887,"about_ca_topic_score_gemma":0.02486792,"teacher_disagreement_score":0.5038375,"about_ca_system_score_codex":0.00012057201,"about_ca_system_score_gemma":0.00013325937,"threshold_uncertainty_score":0.9929257},"labels":[],"label_agreement":null},{"id":"W2757624986","doi":"10.1016/j.cmi.2017.09.018","title":"Aspergillus galactomannan detection in exhaled breath condensate compared to bronchoalveolar lavage fluid for the diagnosis of invasive aspergillosis in immunocompromised patients","year":2017,"lang":"en","type":"article","venue":"Clinical Microbiology and Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Mount Sinai Hospital; University of Toronto; University Health Network","funders":"","keywords":"Exhaled breath condensate; Galactomannan; Bronchoalveolar lavage; Medicine; Interquartile range; Aspergillosis; Gastroenterology; Lung transplantation; Concomitant; Internal medicine; Aspergillus fumigatus; Pathology; Sputum; Malignancy; Aspergillus; Transplantation; Lung; Immunology; Microbiology; Asthma; Biology","score_opus":0.04175463342257059,"score_gpt":0.34543628664603326,"score_spread":0.3036816532234627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2757624986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99790615,0.00015715539,0.000051819094,0.00020035918,0.00029655482,0.0012800811,0.00002656852,0.000010876283,0.00007044515],"genre_scores_gemma":[0.9987822,0.00074168155,0.000029358464,0.00021533837,0.000043981352,0.000114334354,0.000028974679,0.00000925775,0.000034867673],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986219,0.00017062206,0.00062617473,0.00035294535,0.000030368723,0.00019798381],"domain_scores_gemma":[0.9983892,0.00078758586,0.00022925447,0.00037683776,0.00015991245,0.000057246652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007622264,0.00013685336,0.00051278487,0.00008625887,0.00019869929,0.000013657978,0.00009331775,0.00026971396,0.00002225253],"category_scores_gemma":[0.0021551247,0.000099680416,0.00015613255,0.000060795617,0.000351277,0.00008913882,0.00006813081,0.00025766133,0.0000059504773],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020118814,0.00039160167,0.91802704,0.000058787497,0.00005386739,0.0000011371131,0.00008220517,0.000002054532,0.07226021,0.000004853841,0.000047492103,0.007058857],"study_design_scores_gemma":[0.004981175,0.0011009605,0.9642463,0.00014895026,0.00006020981,0.0000027931187,0.000028673205,0.000046415305,0.028805919,0.000032157142,0.00045099444,0.000095452466],"about_ca_topic_score_codex":0.00058145827,"about_ca_topic_score_gemma":0.0046737078,"teacher_disagreement_score":0.04621924,"about_ca_system_score_codex":0.000068797206,"about_ca_system_score_gemma":0.00003988359,"threshold_uncertainty_score":0.40648493},"labels":[],"label_agreement":null},{"id":"W2758131521","doi":"10.3138/jammi.2.1.013","title":"Case report of cerebral phaeohyphomycosis caused by <i>Fonsecaea monophora</i>","year":2017,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; Alberta Health Services; University of Alberta; University of Calgary","funders":"","keywords":"Phaeohyphomycosis; Voriconazole; Brain abscess; Brain biopsy; Amphotericin B; Abscess; Pathology; Medicine; Biology; Biopsy; Antifungal; Dermatology; Surgery","score_opus":0.006531455624394019,"score_gpt":0.24603541662508369,"score_spread":0.23950396100068966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2758131521","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914109,0.00053220865,0.000013302293,0.007147691,0.0005355189,0.0000938029,0.00012120352,0.0000018654403,0.00014351378],"genre_scores_gemma":[0.9987846,0.000142429,0.0000049162554,0.00064822653,0.00007620111,7.6063264e-7,0.000006226433,0.0000048806846,0.00033175497],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99872273,0.0001418032,0.0005783136,0.00010494568,0.0003130391,0.00013916445],"domain_scores_gemma":[0.9972845,0.00020359094,0.0016030263,0.0002652799,0.00038249273,0.00026116075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009820438,0.00008830761,0.0004149697,0.000026784512,0.00019284809,0.000006967562,0.00015373885,0.000156317,0.00007080328],"category_scores_gemma":[0.005388245,0.000058455134,0.00015865988,0.00004232941,0.00022372368,0.000053260923,0.00005676744,0.00030964447,1.1470913e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017039814,0.00014654794,0.92221904,0.00008432167,0.00030730627,0.0024608693,0.000024476985,4.4863597e-7,0.007500775,0.000016237529,0.066790335,0.00027924933],"study_design_scores_gemma":[0.005398769,0.0003509235,0.95078635,0.00040286424,0.0010565742,0.01493898,0.00014098719,0.00002088886,0.011305725,0.00018542679,0.015218993,0.0001934996],"about_ca_topic_score_codex":0.03469001,"about_ca_topic_score_gemma":0.087377034,"teacher_disagreement_score":0.052687023,"about_ca_system_score_codex":0.00027298142,"about_ca_system_score_gemma":0.0021343974,"threshold_uncertainty_score":0.97173804},"labels":[],"label_agreement":null},{"id":"W2762531573","doi":"10.1016/j.cjca.2017.10.002","title":"Mucormycete Infiltration in the Cardiac Conduction System","year":2017,"lang":"en","type":"article","venue":"Canadian Journal of Cardiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Myocarditis; Internal medicine; Cardiology; Prednisolone; Atrioventricular block; Heart block; Jaundice; Atrial fibrillation; Electrocardiography; Anesthesia","score_opus":0.035579593397498346,"score_gpt":0.2851523991311504,"score_spread":0.2495728057336521,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2762531573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9722187,0.00041784876,0.00018905441,0.0014549734,0.0010666357,0.00013110969,0.0000068261797,0.0000018539308,0.02451303],"genre_scores_gemma":[0.9987628,0.00003122084,0.000019268737,0.000083376384,0.0010343713,0.0000017031783,0.0000023551402,0.0000039590504,0.00006097141],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99926764,0.00015447922,0.00024090514,0.000073847,0.0000979666,0.0001651898],"domain_scores_gemma":[0.9991389,0.0000386089,0.00016780142,0.00033173859,0.00017260165,0.00015034982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010314914,0.000058772526,0.0003253764,0.00009882505,0.00018089724,0.00003332752,0.00015533237,0.000091993265,0.0000040452874],"category_scores_gemma":[0.00042293384,0.000039015264,0.00014993567,0.000034718418,0.00017112958,0.000115285475,0.0000029501966,0.00026103423,0.0000065590075],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000678699,8.077125e-7,0.989414,0.00003406038,0.00006357833,0.0003361246,0.00027026446,0.00003165828,0.0010743066,0.0013618254,0.0049342355,0.0024112652],"study_design_scores_gemma":[0.00033679442,0.00013321152,0.96903574,0.00005585111,0.00005973822,0.00052416103,0.0013342005,0.000004565704,0.00007204291,0.000058880152,0.028346235,0.000038598362],"about_ca_topic_score_codex":0.0015384591,"about_ca_topic_score_gemma":0.0041065514,"teacher_disagreement_score":0.026544105,"about_ca_system_score_codex":0.00018116822,"about_ca_system_score_gemma":0.00085933076,"threshold_uncertainty_score":0.23257},"labels":[],"label_agreement":null},{"id":"W2763755664","doi":"10.1128/mbio.01537-17","title":"Disarming Fungal Pathogens: <i>Bacillus safensis</i> Inhibits Virulence Factor Production and Biofilm Formation by <i>Cryptococcus neoformans</i> and <i>Candida albicans</i>","year":2017,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Deutsche Forschungsgemeinschaft","keywords":"Microbiology; Cryptococcus neoformans; Candida albicans; Biofilm; Biology; Virulence; Virulence factor; Human pathogen; Corpus albicans; Pathogen; Bacteria; Biochemistry","score_opus":0.017113543782916844,"score_gpt":0.26052059514420933,"score_spread":0.24340705136129248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2763755664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99503404,0.0009834742,0.0003183736,0.0012268134,0.00024191702,0.00076359464,0.00018076214,0.0000698618,0.0011811465],"genre_scores_gemma":[0.99717814,0.0010309406,0.0002221033,0.0004962022,0.00015570699,0.000026809439,0.000045963712,0.000022352842,0.0008218077],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983348,0.000037853988,0.00036885127,0.00052417186,0.00032472136,0.00040956505],"domain_scores_gemma":[0.9987747,0.000031477728,0.00023471938,0.0006035584,0.0001251724,0.00023039196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002940967,0.00026539748,0.00036604484,0.000052856365,0.0007809272,0.0001579073,0.00010292184,0.00015185602,0.000030411511],"category_scores_gemma":[0.0003375143,0.00022382752,0.000065669796,0.000073401134,0.00039639004,0.0009008445,0.00011096251,0.00024821432,0.000018147139],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050088164,0.00011656501,0.22258013,0.00047526244,0.00003616211,0.00002210682,0.0009552671,1.8755667e-7,0.70706344,0.000048913356,0.0044906787,0.06371043],"study_design_scores_gemma":[0.0032238702,0.0008044145,0.4515874,0.000949386,0.00026346673,0.00032938496,0.0011456945,0.0002712236,0.4970442,0.0002002716,0.043177884,0.0010027982],"about_ca_topic_score_codex":0.00010456734,"about_ca_topic_score_gemma":0.00020814883,"teacher_disagreement_score":0.22900727,"about_ca_system_score_codex":0.00007689997,"about_ca_system_score_gemma":0.000053150063,"threshold_uncertainty_score":0.91274214},"labels":[],"label_agreement":null},{"id":"W2763799040","doi":"10.1111/myc.12701","title":"Novel bi‐allelic splice mutations in <i><scp>CARD</scp>9</i> causing adult‐onset <i>Candida</i> endophthalmitis","year":2017,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; McGill University; CSL Behring","keywords":"Biology; Frameshift mutation; Candida albicans; Genetics; Exome sequencing; Exon; Mutation; Gene","score_opus":0.028299209682327464,"score_gpt":0.3052187521943575,"score_spread":0.27691954251203005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2763799040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96262413,0.0005444476,0.00022064718,0.00052485487,0.0002858713,0.00042086293,0.00012406081,0.00007583829,0.035179265],"genre_scores_gemma":[0.99497247,0.0003341672,0.0010573912,0.000763519,0.00018644963,0.000041219744,0.000064156826,0.000037094167,0.0025435067],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99818027,0.000039475664,0.00039717776,0.0005012253,0.0003764242,0.0005054383],"domain_scores_gemma":[0.99804795,0.00039408848,0.00018801725,0.00096365035,0.0002058233,0.00020047274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025320577,0.00024733195,0.00046388502,0.00012875743,0.000482753,0.00009873678,0.00020697765,0.00014404571,0.000033790686],"category_scores_gemma":[0.0026408955,0.00023273828,0.00016423238,0.00017048891,0.0002541608,0.00028264945,0.000098802986,0.00032524456,0.00010679888],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079620695,0.00058108254,0.91804975,0.00025079743,0.00007751163,0.000992699,0.0012128844,0.000011183122,0.07046089,0.0002749417,0.0058621285,0.0021465342],"study_design_scores_gemma":[0.0024773702,0.00014207253,0.9803765,0.00045971444,0.000106405525,0.00055854936,0.0015548571,0.000104831204,0.009468029,0.00030541996,0.0043014903,0.00014480218],"about_ca_topic_score_codex":0.0022029392,"about_ca_topic_score_gemma":0.0021255857,"teacher_disagreement_score":0.06232673,"about_ca_system_score_codex":0.00012074698,"about_ca_system_score_gemma":0.00022211506,"threshold_uncertainty_score":0.9490792},"labels":[],"label_agreement":null},{"id":"W2763904592","doi":"10.1016/j.ram.2017.05.003","title":"Biofilm-forming capacity of blood–borne Candida albicans strains and effects of antifungal agents","year":2017,"lang":"es","type":"article","venue":"Revista Argentina de Microbiología","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Baskent Üniversitesi","keywords":"Biofilm; Anidulafungin; Micafungin; Microbiology; Itraconazole; Caspofungin; Candida albicans; Fluconazole; Amphotericin B; Voriconazole; Echinocandins; Corpus albicans; Echinocandin; Antifungal; Chemistry; Medicine; Biology; Bacteria","score_opus":0.020223345950229576,"score_gpt":0.281727976261119,"score_spread":0.26150463031088944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2763904592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98996484,0.0073975427,0.000056542798,0.00009146652,0.00022727346,0.0008995849,0.00075403193,0.000020055277,0.0005886809],"genre_scores_gemma":[0.9943719,0.0041198367,0.00051528675,0.00004985715,0.00012556333,0.0000062333274,0.00006820577,0.000039698403,0.0007034103],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9970737,0.0002482069,0.0009653042,0.00071669073,0.00019067143,0.0008054332],"domain_scores_gemma":[0.9967348,0.00017871195,0.0012330405,0.0013245242,0.00024109047,0.00028781072],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010447205,0.00048031207,0.0014279138,0.00013845132,0.00042325433,0.000103092854,0.0005108827,0.00038828142,0.00018697027],"category_scores_gemma":[0.00133809,0.00042357083,0.00040874444,0.00012753831,0.0015900951,0.00014437387,0.00028947592,0.00041807265,0.000010536317],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009283492,0.0002968168,0.43770716,0.0065284255,0.0003678937,0.000049677295,0.00017926232,6.1765924e-8,0.5531577,0.0005435194,0.00021760032,0.0008590594],"study_design_scores_gemma":[0.0015530055,0.0004074835,0.68732923,0.0030774444,0.0011040343,0.000036968388,0.00006833977,0.000010845731,0.30432972,0.000017905932,0.0017841903,0.00028085345],"about_ca_topic_score_codex":0.0009336609,"about_ca_topic_score_gemma":0.000074938645,"teacher_disagreement_score":0.24962206,"about_ca_system_score_codex":0.000075261436,"about_ca_system_score_gemma":0.00028103372,"threshold_uncertainty_score":0.9998216},"labels":[],"label_agreement":null},{"id":"W2764214344","doi":"10.1093/mmy/myx082","title":"Deletion of Aspergillus nidulans GDP-mannose transporters affects hyphal morphometry, cell wall architecture, spore surface character, cell adhesion, and biofilm formation","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Microbiology; Aspergillus nidulans; Biofilm; Biology; Aspergillus fumigatus; Echinocandins; Cell wall; Mannose; Antifungal drug; Cell biology; Candida albicans; Biochemistry; Bacteria; Amphotericin B; Mutant","score_opus":0.012009083041003739,"score_gpt":0.26083909284759205,"score_spread":0.24883000980658831,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2764214344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944198,0.00039947307,0.0010407033,0.0020422323,0.00025719704,0.00046203317,0.000034961908,0.000033895354,0.0013096699],"genre_scores_gemma":[0.9976332,0.0006420031,0.00055691705,0.0004995591,0.00009743006,0.0000070047527,0.00014353106,0.000019375684,0.00040098152],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981644,0.000105525534,0.00043215515,0.00038322096,0.00052709074,0.00038760097],"domain_scores_gemma":[0.9985552,0.00018029007,0.00029207955,0.0004979645,0.00009579521,0.0003787009],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059842743,0.00021738278,0.00060355564,0.00011887826,0.00017406327,0.00001197816,0.00022175924,0.00043539173,0.00042642525],"category_scores_gemma":[0.0003190228,0.00017109157,0.00012987942,0.00008882984,0.000522766,0.00011413112,0.000048275226,0.00043398986,0.000020603777],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028730615,0.0014561072,0.5099826,0.003062287,0.00008222337,0.0010316671,0.0013911427,0.000005538388,0.44894853,0.00013684844,0.0029298633,0.02810013],"study_design_scores_gemma":[0.0038434379,0.0012837647,0.92340165,0.00018962291,0.00015436464,0.00010191393,0.00012706431,0.00042175964,0.06590546,0.00012216803,0.004225353,0.00022343149],"about_ca_topic_score_codex":0.00017586611,"about_ca_topic_score_gemma":0.0002644715,"teacher_disagreement_score":0.41341907,"about_ca_system_score_codex":0.00004965818,"about_ca_system_score_gemma":0.000112478345,"threshold_uncertainty_score":0.69769114},"labels":[],"label_agreement":null},{"id":"W2765890360","doi":"10.1186/s13072-017-0156-y","title":"NuA4 histone acetyltransferase activity is required for H4 acetylation on a dosage-compensated monosomic chromosome that confers resistance to fungal toxins","year":2017,"lang":"en","type":"article","venue":"Epigenetics & Chromatin","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institutes of Health; University of Toronto; National Institute of General Medical Sciences; University of Rochester","keywords":"Biology; Dosage compensation; Genetics; Histone H4; Chromosome; Acetylation; Gene; Histone acetyltransferase; Ploidy; Gene dosage; Acetyltransferase; Histone; Gene expression","score_opus":0.05666073123605199,"score_gpt":0.35082047009630896,"score_spread":0.294159738860257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765890360","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98466885,0.00020279088,0.0035788105,0.006100146,0.00033155727,0.0024559395,0.00044615314,0.00012604352,0.0020897016],"genre_scores_gemma":[0.9890079,0.00012577356,0.0035296762,0.00076734886,0.0002373166,0.00014942171,0.00008011789,0.00008566712,0.0060167853],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99713886,0.00010081141,0.00052592496,0.0009351167,0.00061622733,0.0006830905],"domain_scores_gemma":[0.99691796,0.00022974671,0.00032764385,0.0018605535,0.00023874447,0.00042537376],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00048478894,0.00046683417,0.0008341863,0.00012643352,0.00081275334,0.00015594988,0.00042651128,0.0002910632,0.0002714871],"category_scores_gemma":[0.0005903926,0.00045932503,0.0003105567,0.00012508547,0.00027902136,0.00022380259,0.000065714215,0.00029823382,0.00013677316],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003970071,0.0004700031,0.009228637,0.00043493308,0.00014166703,0.000039141934,0.0012937434,0.000015230691,0.97617227,0.00022714096,0.005094049,0.0029130906],"study_design_scores_gemma":[0.0032566604,0.00083023094,0.35242668,0.00043879214,0.00013920091,0.000003376657,0.00009907224,0.00040037662,0.6382196,0.00013203108,0.0036127667,0.00044122952],"about_ca_topic_score_codex":0.000100953075,"about_ca_topic_score_gemma":0.00072682416,"teacher_disagreement_score":0.34319806,"about_ca_system_score_codex":0.00055179995,"about_ca_system_score_gemma":0.0003177529,"threshold_uncertainty_score":0.99978584},"labels":[],"label_agreement":null},{"id":"W2766103173","doi":"10.1016/s1473-3099(17)30568-6","title":"Itraconazole and antiretroviral therapy: strategies for empirical dosing","year":2017,"lang":"en","type":"letter","venue":"The Lancet Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Itraconazole; Efavirenz; Pharmacology; Nevirapine; Medicine; Dosing; Pharmacokinetics; CYP3A4; Virology; Internal medicine; Human immunodeficiency virus (HIV); Antifungal; Antiretroviral therapy; Cytochrome P450; Dermatology; Viral load","score_opus":0.06525716082029843,"score_gpt":0.3605090689872129,"score_spread":0.2952519081669145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766103173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6866004,0.01438332,0.00017764432,0.2898571,0.00061387144,0.0017188739,0.0007073037,0.00043006625,0.005511435],"genre_scores_gemma":[0.7816739,0.0010181319,0.000014636366,0.20787583,0.007956,0.00008308769,0.00019960645,0.000049145136,0.0011296705],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985654,0.00008522748,0.00021005816,0.00042198267,0.00025184138,0.00046549193],"domain_scores_gemma":[0.9984455,0.000367381,0.00018185112,0.00082232244,0.00010844718,0.00007446597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017718582,0.00031651344,0.0007820649,0.000048839756,0.000539684,0.00031804913,0.00020146633,0.00031658311,0.00004110882],"category_scores_gemma":[0.00020294945,0.00019419065,0.0002792043,0.000040253475,0.000504001,0.00014925028,0.000046149344,0.0007866306,0.000009122059],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041946015,0.00006800085,0.31702095,0.0006447416,0.00019017405,0.00008877545,0.0000782673,3.2605934e-7,0.000060897728,0.00007313649,0.6769865,0.00436874],"study_design_scores_gemma":[0.0027442388,0.0008345881,0.34292397,0.00030686188,0.0005738423,0.00006630798,0.000082526654,0.00003661657,0.000022442096,0.007624644,0.6443606,0.00042334723],"about_ca_topic_score_codex":0.00006628992,"about_ca_topic_score_gemma":0.000020224346,"teacher_disagreement_score":0.0950735,"about_ca_system_score_codex":0.000053423442,"about_ca_system_score_gemma":0.00033761226,"threshold_uncertainty_score":0.7918865},"labels":[],"label_agreement":null},{"id":"W2766196932","doi":"10.1039/c7mt00110j","title":"The cytochrome<i>b</i><sub>5</sub>CybE is regulated by iron availability and is crucial for azole resistance in<i>A. fumigatus</i>","year":2017,"lang":"en","type":"article","venue":"Metallomics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Drug Research and Development","funders":"Austrian Science Fund; Deutsche Forschungsgemeinschaft","keywords":"Azole; Aspergillus fumigatus; Resistance (ecology); Cytochrome; Chemistry; Microbiology; Biology; Computational biology; Biochemistry; Antifungal; Ecology","score_opus":0.014346767100849716,"score_gpt":0.2716057627363555,"score_spread":0.2572589956355058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766196932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904393,0.0024131322,0.00007670328,0.004315321,0.00015955567,0.0010478911,0.00022666092,0.000033715838,0.0012876965],"genre_scores_gemma":[0.99408424,0.0013302815,0.000436149,0.001052906,0.0001074662,0.00005789493,0.000032483887,0.00003810374,0.0028604553],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978502,0.00006051319,0.0005473398,0.00069612503,0.00033181833,0.000514006],"domain_scores_gemma":[0.9976874,0.00020651084,0.00026633206,0.0014797061,0.00018322917,0.00017683888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011620311,0.00027902046,0.00057160616,0.00003354202,0.0008238444,0.0001737406,0.0003385461,0.0002339856,0.000015134262],"category_scores_gemma":[0.0008064655,0.00021394166,0.00020086227,0.00009023174,0.0007359642,0.00021452772,0.0001308833,0.00031560205,0.000014159822],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005091949,0.00032556278,0.048749868,0.0006019253,0.0001674141,0.000015540294,0.00105351,2.851807e-7,0.86915463,0.00070269464,0.06618745,0.007949196],"study_design_scores_gemma":[0.0059784246,0.0003285282,0.54007465,0.00024123215,0.00033369576,0.0000068918184,0.00029614498,0.00026097073,0.3191625,0.009590956,0.12304572,0.00068030803],"about_ca_topic_score_codex":0.000043276053,"about_ca_topic_score_gemma":0.0013379165,"teacher_disagreement_score":0.54999214,"about_ca_system_score_codex":0.0001577664,"about_ca_system_score_gemma":0.00015641046,"threshold_uncertainty_score":0.8724288},"labels":[],"label_agreement":null},{"id":"W2766298573","doi":"10.1093/mmy/myx090","title":"Overexpression of Aspergillus nidulans α-1,3-glucan synthase increases cellular adhesion and causes cell wall defects","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Aspergillus fumigatus; Aspergillus nidulans; Biofilm; Hypha; Microbiology; Adhesion; Glucan; Cell adhesion; Pathogenesis; Phenotype; Biology; Cell biology; Strain (injury); Cell wall; Chemistry; Cell; Bacteria; Gene; Biochemistry; Immunology; Genetics; Anatomy","score_opus":0.015576931294438235,"score_gpt":0.28811494246148206,"score_spread":0.27253801116704385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766298573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950789,0.0010587903,0.00004266492,0.00051825383,0.00011759274,0.00024395066,0.00001343766,0.000028475102,0.0028979306],"genre_scores_gemma":[0.99833,0.0005472953,0.00014776134,0.0004143829,0.00012300987,0.000009389089,0.000017545432,0.00001632749,0.00039426982],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99833995,0.00014596475,0.00033328313,0.00038318112,0.0004793975,0.0003182095],"domain_scores_gemma":[0.99813044,0.0004598825,0.00019050587,0.0006456537,0.00008763436,0.00048585702],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045177896,0.00017188751,0.00056138536,0.00006509413,0.0002283269,0.000010991461,0.00020608408,0.00036825996,0.001383781],"category_scores_gemma":[0.0036668007,0.00012663491,0.000120566016,0.000035642992,0.0007352902,0.000066053864,0.00020179,0.00029347587,0.000019725465],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000786878,0.0007686141,0.57542604,0.0006298269,0.000039972354,0.0005097501,0.00010945409,1.244505e-7,0.4176273,0.00021318786,0.0019625556,0.0019263307],"study_design_scores_gemma":[0.0028279815,0.0012038352,0.82137847,0.00073289266,0.00018929358,0.00005160351,0.00013335854,0.00010195824,0.16960147,0.00026921355,0.0033156946,0.00019423373],"about_ca_topic_score_codex":0.0009283498,"about_ca_topic_score_gemma":0.00031005114,"teacher_disagreement_score":0.24802582,"about_ca_system_score_codex":0.00003764816,"about_ca_system_score_gemma":0.0002502006,"threshold_uncertainty_score":0.99952906},"labels":[],"label_agreement":null},{"id":"W2767075386","doi":"10.1111/petr.13070","title":"Early bacterial and fungal infection in children receiving allogeneic stem cell transplantation for acute lymphoblastic leukemia in Argentina","year":2017,"lang":"en","type":"article","venue":"Pediatric Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Hematopoietic stem cell transplantation; Cohort; Retrospective cohort study; Transplantation; Lymphoblastic Leukemia; Pediatrics; Leukemia; Intensive care medicine; Immunology; Internal medicine","score_opus":0.010693516016862012,"score_gpt":0.25592541124305496,"score_spread":0.24523189522619293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767075386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99667645,0.00009343024,0.0019509788,0.000018868112,0.00020025446,0.00084595574,0.000116460185,0.000029133258,0.00006849779],"genre_scores_gemma":[0.98696816,0.012186133,0.00022020712,0.000010519181,0.00024005235,0.000059764072,0.00024437273,0.000020467593,0.000050313956],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99873406,0.00005176153,0.00038922622,0.00038264072,0.00016723623,0.0002750841],"domain_scores_gemma":[0.9994581,0.000088928886,0.00016299174,0.00017065479,0.00004229919,0.000077033554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030490433,0.0001738556,0.0002683338,0.00023518625,0.00016646643,0.00006507101,0.00006576963,0.00016357703,0.000008276578],"category_scores_gemma":[0.000015655167,0.00017718959,0.00006980553,0.000113658054,0.000032856613,0.00038088294,0.0000047157405,0.00013761247,0.0000042867305],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019047356,0.000052518153,0.9900919,0.0006189735,0.000015230662,0.00002751924,0.0006837141,0.00002770039,0.005184257,0.000007178876,0.0000029019143,0.0013833534],"study_design_scores_gemma":[0.0051468275,0.00019924018,0.99153584,0.00006730244,0.0005915664,0.00004637229,0.0000068709624,0.00014665168,0.002064676,0.000026106683,0.0000011838691,0.00016733781],"about_ca_topic_score_codex":0.0006808408,"about_ca_topic_score_gemma":0.0012554605,"teacher_disagreement_score":0.012092703,"about_ca_system_score_codex":0.00018217803,"about_ca_system_score_gemma":0.00015909981,"threshold_uncertainty_score":0.72255814},"labels":[],"label_agreement":null},{"id":"W2767297291","doi":"10.1111/tid.12808","title":"Outbreak of invasive aspergillosis in heart transplant recipients: The role of screening computed tomography scans in asymptomatic patients and universal antifungal prophylaxis","year":2017,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University of Alberta; University Health Network","funders":"","keywords":"Medicine; Asymptomatic; Voriconazole; Aspergillosis; Radiology; Internal medicine; Surgery; Antifungal; Dermatology","score_opus":0.007698073413516943,"score_gpt":0.22685134001469107,"score_spread":0.21915326660117412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767297291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99810165,0.00022140419,0.00004933183,0.00006609469,0.000050616767,0.000779564,0.0003933089,0.000019670688,0.0003183446],"genre_scores_gemma":[0.9996622,0.00016695692,0.000037795562,0.00003375499,0.000010081049,0.000012981524,0.000057102014,0.000014916544,0.000004178447],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99850607,0.00013158804,0.00045623968,0.0003148056,0.00032849694,0.00026282002],"domain_scores_gemma":[0.99897456,0.00015649416,0.00017047364,0.0004178927,0.00010894594,0.00017165187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023855902,0.00020092292,0.0004855942,0.00026695564,0.00014371797,0.000017633116,0.0001585371,0.00008538298,0.000014744975],"category_scores_gemma":[0.00007703524,0.00015388834,0.00016817408,0.00023293597,0.00038060723,0.00017478196,0.00002147172,0.00021601502,7.7678806e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001744056,0.00087492133,0.9923108,0.0005131167,0.00008189306,0.000040711388,0.0012102963,0.00003410727,0.0021684836,0.0000606508,0.0000022559539,0.00095867435],"study_design_scores_gemma":[0.0031361016,0.0004591814,0.99241596,0.0016481393,0.00017901756,0.000004482792,0.00014307215,0.00040990507,0.0013692242,0.00008959301,0.000002533198,0.00014279906],"about_ca_topic_score_codex":0.0016715897,"about_ca_topic_score_gemma":0.002294085,"teacher_disagreement_score":0.0015605687,"about_ca_system_score_codex":0.00003871639,"about_ca_system_score_gemma":0.00011486047,"threshold_uncertainty_score":0.6275384},"labels":[],"label_agreement":null},{"id":"W2770627510","doi":"10.1128/msphere.00477-17","title":"The Candida albicans TOR-Activating GTPases Gtr1 and Rhb1 Coregulate Starvation Responses and Biofilm Formation","year":2017,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Research Council Canada; National Tsing Hua University; Science Foundation Ireland","keywords":"Biofilm; Candida albicans; GTPase; Biology; Microbiology; Mutant; Effector; Regulator; Cell biology; Corpus albicans; Virulence; Gene; Bacteria; Biochemistry; Genetics","score_opus":0.029379509880082814,"score_gpt":0.3059771875019873,"score_spread":0.2765976776219045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770627510","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955649,0.0006570162,0.000090377755,0.0016413984,0.000045097055,0.00020459163,0.000010828798,0.000021249214,0.0017645583],"genre_scores_gemma":[0.996548,0.0003603176,0.00022546688,0.00009660002,0.000053622247,0.0000071676127,0.000006512433,0.00000750643,0.0026948163],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99939835,0.000034507386,0.00014751866,0.00014244832,0.00013526031,0.00014193624],"domain_scores_gemma":[0.9992472,0.00016014648,0.00012717533,0.00031571958,0.0000888667,0.000060899],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025704075,0.00008445427,0.00012326062,0.000009679333,0.00088138646,0.00013510683,0.00005018871,0.000048287602,0.000037123107],"category_scores_gemma":[0.00075478206,0.000055152796,0.000018633187,0.00003037134,0.00021001676,0.00027714865,0.000036461355,0.00008331232,0.0000021580831],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017578605,0.00002929027,0.77080023,0.00019107923,0.00004043309,0.000015600204,0.0008307531,5.596338e-7,0.04544471,0.0006392029,0.002038634,0.17821163],"study_design_scores_gemma":[0.0005143432,0.00012568414,0.9853921,0.00013372685,0.000019669986,0.000008974073,0.0013519102,0.00039057742,0.004706945,0.00026212484,0.007018223,0.00007574241],"about_ca_topic_score_codex":0.0004276708,"about_ca_topic_score_gemma":0.0019100328,"teacher_disagreement_score":0.21459183,"about_ca_system_score_codex":0.000037228074,"about_ca_system_score_gemma":0.00005451603,"threshold_uncertainty_score":0.67790014},"labels":[],"label_agreement":null},{"id":"W2770850718","doi":"10.1139/cjm-2017-0410","title":"Limited evidence of fungicide-driven triazole-resistant <i>Aspergillus fumigatus</i> in Hamilton, Canada","year":2017,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; McMaster University","keywords":"Voriconazole; Aspergillus fumigatus; Itraconazole; Biology; Fungicide; Gene flow; Aspergillosis; Population; Triazole; Genetics; Microbiology; Gene; Botany; Antifungal; Medicine; Genetic variation; Chemistry; Environmental health","score_opus":0.02958564977654403,"score_gpt":0.2674757971651732,"score_spread":0.23789014738862918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770850718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99158996,0.0050751395,0.000006766959,0.0020393853,0.00044751907,0.00016174902,0.00008635081,0.0000016165454,0.0005914964],"genre_scores_gemma":[0.9986933,0.000185976,0.00011921431,0.0005950009,0.00007841301,7.7201906e-7,0.000006279504,0.00001278314,0.0003082543],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983351,0.00011442471,0.00079936924,0.00019953551,0.000096299336,0.00045525056],"domain_scores_gemma":[0.9976927,0.00016431957,0.0006236133,0.00055067893,0.00045367112,0.0005150286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054478546,0.00016360941,0.0007305206,0.00022702834,0.00014351039,0.000016357139,0.0004668674,0.00017177392,0.00014927228],"category_scores_gemma":[0.0012649847,0.00013758535,0.00015538029,0.00010667911,0.0004273176,0.000106203595,0.000019085808,0.000427672,0.0000028987445],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011516964,0.000024830522,0.374623,0.00011584051,0.00009114469,0.0016831548,0.0002031878,0.000016863818,0.61572754,0.000069542184,0.0059098313,0.00038335644],"study_design_scores_gemma":[0.0033530884,0.0010826051,0.908032,0.0024106475,0.00016134122,0.00076151785,0.00053104846,0.000012965243,0.04427311,0.000034213608,0.039027054,0.0003204152],"about_ca_topic_score_codex":0.5402226,"about_ca_topic_score_gemma":0.9931676,"teacher_disagreement_score":0.57145447,"about_ca_system_score_codex":0.0006366596,"about_ca_system_score_gemma":0.0096932165,"threshold_uncertainty_score":0.9959209},"labels":[],"label_agreement":null},{"id":"W2774229198","doi":"10.1128/msphere.00354-17","title":"Put3 Positively Regulates Proline Utilization in Candida albicans","year":2017,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Canadian Institutes of Health Research; Concordia University; Deutsche Forschungsgemeinschaft","keywords":"Candida albicans; Saccharomyces cerevisiae; Yeast; Pathogen; Biology; Microbiology; Corpus albicans; Fungal pathogen; Transcription factor; Human pathogen; Gene; Genetics","score_opus":0.05052758065997377,"score_gpt":0.34349473564773414,"score_spread":0.2929671549877604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2774229198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96880525,0.00033206528,0.000097171,0.0016454182,0.000050530918,0.0002745035,0.000007613372,0.000026502332,0.028760955],"genre_scores_gemma":[0.9895027,0.000058454352,0.00022328281,0.00015543039,0.000072276365,0.000007949932,0.000017032578,0.000011311044,0.009951528],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992918,0.00001975031,0.00015599784,0.00021328905,0.00014170018,0.00017751408],"domain_scores_gemma":[0.9993503,0.000015659283,0.00006982957,0.0004181698,0.00007674516,0.00006927636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013340174,0.000089071735,0.00018862188,0.000016750884,0.00013409811,0.000031800442,0.000091348404,0.00007696484,0.000428053],"category_scores_gemma":[0.00022110881,0.00007372675,0.00004288785,0.00005031517,0.000100646095,0.0001119237,0.000028421991,0.00010862952,0.00002965237],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002934703,0.00010358422,0.97806466,0.000069480266,0.000012657271,0.00006577832,0.0001718644,0.0000020077748,0.004064852,0.00021460652,0.0006663629,0.01627067],"study_design_scores_gemma":[0.000779131,0.000082379884,0.99308413,0.00018966543,0.000016981423,0.000005253521,0.000117418975,0.00031927897,0.0034356932,0.00029322246,0.0016012965,0.00007555085],"about_ca_topic_score_codex":0.0006377049,"about_ca_topic_score_gemma":0.006010597,"teacher_disagreement_score":0.020697495,"about_ca_system_score_codex":0.000067214685,"about_ca_system_score_gemma":0.000096208605,"threshold_uncertainty_score":0.468688},"labels":[],"label_agreement":null},{"id":"W2776686103","doi":"10.1073/pnas.1711141115","title":"Epigenetic control of pheromone MAPK signaling determines sexual fecundity in <i>Candida albicans</i>","year":2017,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Institute of General Medical Sciences; Burroughs Wellcome Fund","keywords":"Candida albicans; Epigenetics; Biology; MAPK/ERK pathway; Signal transduction; Cell biology; Sexual reproduction; Mating; Carcinogenesis; Genetics; Cancer","score_opus":0.05093871167656795,"score_gpt":0.339249677389406,"score_spread":0.28831096571283804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2776686103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99602383,0.00015362566,0.0000035607368,0.0013556579,0.000013416401,0.00021558144,0.0000147125575,0.0000032854825,0.0022163077],"genre_scores_gemma":[0.999253,0.000017126677,0.000369732,0.00012680658,0.000058257076,0.0000049682512,7.440534e-8,0.000002959821,0.00016712368],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983121,0.0000068561226,0.00039781674,0.00021981186,0.00091374083,0.00014966683],"domain_scores_gemma":[0.99894565,0.00013116558,0.0005939174,0.000020836282,0.00026909992,0.000039350612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014713373,0.00008477084,0.00029597816,0.000084228,0.00017388271,0.000015019434,0.00056403753,0.00007412488,0.000020271393],"category_scores_gemma":[0.0013100429,0.000055911976,0.000070626375,0.00018831002,0.001429047,0.00024146985,0.00007019738,0.00013855303,4.470059e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007818956,0.000056384317,0.44241518,0.00012404754,0.000009072043,2.2932229e-8,0.00007842265,0.000009608358,0.55616117,0.00056694465,0.000026245938,0.00047473275],"study_design_scores_gemma":[0.00048021422,0.00008953268,0.6457263,0.00016212034,0.000018833789,0.0000019005166,0.00014641309,0.00036346467,0.34878877,0.0041707107,0.000009017376,0.000042705546],"about_ca_topic_score_codex":0.0000619939,"about_ca_topic_score_gemma":0.0000031045092,"teacher_disagreement_score":0.20737237,"about_ca_system_score_codex":0.000028659984,"about_ca_system_score_gemma":0.00006992823,"threshold_uncertainty_score":0.5265383},"labels":[],"label_agreement":null},{"id":"W2777281989","doi":"10.1038/ajg.2017.471","title":"Prediction of Fungal Infection Development and Their Impact on Survival Using the NACSELD Cohort","year":2017,"lang":"en","type":"article","venue":"The American Journal of Gastroenterology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":119,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Alberta","funders":"","keywords":"Medicine; Spontaneous bacterial peritonitis; Cirrhosis; Internal medicine; Fungemia; Case fatality rate; Cohort; Intensive care unit; Peritonitis; Intensive care medicine; Immunology; Mycosis; Epidemiology","score_opus":0.035927712100253605,"score_gpt":0.30872760604589894,"score_spread":0.27279989394564536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2777281989","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975511,0.000022662329,0.0015721841,0.00054974435,0.00015329136,0.000099993,0.0000045682996,0.0000027947979,0.000043687218],"genre_scores_gemma":[0.9995382,0.0000711988,0.00010065475,0.00014163525,0.00013310243,7.210094e-7,5.195824e-7,0.0000066399725,0.000007346796],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990806,0.00019609615,0.00031215587,0.000086711654,0.0001629938,0.00016142493],"domain_scores_gemma":[0.9986131,0.00008432789,0.00081972964,0.00028360612,0.00013793503,0.00006130779],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010476182,0.00010544561,0.00043148684,0.000051340798,0.00021914214,0.000013420281,0.0001276115,0.000018860223,0.000007178027],"category_scores_gemma":[0.00011009161,0.000044421424,0.000116546646,0.000030463034,0.00070743635,0.000058805577,0.00003905095,0.00027064237,3.1847017e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008810275,0.00006222018,0.9839914,0.0000059580525,0.00028146245,0.0000048814704,0.00028844894,0.000032326516,0.003312695,0.000002949958,0.000022801216,0.003184593],"study_design_scores_gemma":[0.0004950613,0.0061774035,0.9915826,0.000052924428,0.0000827026,0.00041273684,0.00034178825,0.00011900101,0.000677484,0.000014747415,0.000025423566,0.000018180353],"about_ca_topic_score_codex":0.00010104774,"about_ca_topic_score_gemma":0.000048802063,"teacher_disagreement_score":0.008315214,"about_ca_system_score_codex":0.00007028937,"about_ca_system_score_gemma":0.000080852995,"threshold_uncertainty_score":0.26065788},"labels":[],"label_agreement":null},{"id":"W2782392638","doi":"10.1093/jac/dkx449","title":"Use of echinocandin prophylaxis in solid organ transplantation","year":2017,"lang":"en","type":"review","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Echinocandin; Echinocandins; Intensive care medicine; Context (archaeology); Immunosuppression; Aspergillosis; Medicine; Invasive candidiasis; Antifungal; Transplantation; Epidemiology; Incidence (geometry); Amphotericin B; Surgery; Immunology; Internal medicine; Caspofungin; Fluconazole; Biology; Dermatology","score_opus":0.12800015581978974,"score_gpt":0.40235167908370983,"score_spread":0.2743515232639201,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2782392638","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.061334323,0.9366506,0.00019283206,0.00017641463,0.0004030871,0.0010317204,0.00008960805,0.000009896697,0.000111547575],"genre_scores_gemma":[0.013332883,0.9852117,0.0008270392,0.000083893414,0.00021470028,7.550284e-7,0.000022634204,0.000052573323,0.00025385662],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99767745,0.000111076784,0.001455561,0.00021909011,0.00029063632,0.00024617833],"domain_scores_gemma":[0.9973515,0.000093054914,0.0018195672,0.0003927045,0.00024926433,0.00009388477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058897,0.00032141202,0.0026947036,0.00042546226,0.000048113587,0.000041891322,0.00025936365,0.00040420517,0.00006582797],"category_scores_gemma":[0.000114514565,0.00022742598,0.000892941,0.00019095589,0.0001484457,0.00021976486,0.0000102802915,0.00074796175,0.0000039568818],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021494774,0.00077277643,0.0022810148,0.03663162,0.00053157745,0.000525855,0.0005210042,0.0000010238748,0.009556732,0.000005404033,0.0013103093,0.9457132],"study_design_scores_gemma":[0.005460544,0.0019524416,0.0033777547,0.1176482,0.0016773163,0.0022198658,0.00002559845,0.0000022975332,0.014419864,0.000020538459,0.8524661,0.0007294441],"about_ca_topic_score_codex":0.00003634331,"about_ca_topic_score_gemma":0.00004156711,"teacher_disagreement_score":0.9449838,"about_ca_system_score_codex":0.0001593471,"about_ca_system_score_gemma":0.0009456244,"threshold_uncertainty_score":0.92741627},"labels":[],"label_agreement":null},{"id":"W2783354523","doi":"10.3389/fimmu.2017.01968","title":"The Interface between Fungal Biofilms and Innate Immunity","year":2018,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":143,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Burroughs Wellcome Fund; Foundation for the National Institutes of Health; Fonds de Recherche du Québec - Santé; Doris Duke Charitable Foundation","keywords":"Biofilm; Innate immune system; Microbiology; Biology; Immune system; Immunity; Acquired immune system; Immunology; Bacteria","score_opus":0.03256571544541806,"score_gpt":0.34035493392193455,"score_spread":0.3077892184765165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2783354523","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0019466088,0.9946555,0.00018241911,0.00009821034,0.0014326461,0.0007470167,0.000033313758,0.000038248716,0.0008660201],"genre_scores_gemma":[0.0012291542,0.9960993,0.0004932989,0.000021231252,0.00015074451,0.00004169448,0.000053571493,0.000043028223,0.0018680017],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974671,0.00056739233,0.00078807137,0.00049416925,0.00013527043,0.00054797373],"domain_scores_gemma":[0.99827987,0.0003237436,0.00028335644,0.0009740588,0.00007045431,0.000068489266],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00096284144,0.00040761204,0.0020230953,0.0002397527,0.0002310788,0.000033442095,0.00046223085,0.0007457561,0.000019407837],"category_scores_gemma":[0.0004708625,0.00025892677,0.00026873135,0.0003686078,0.0015877004,0.000055610173,0.00033487676,0.001520173,0.000049607144],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016490559,0.00003673152,0.013472205,0.002305181,0.00071098167,0.000020653479,0.000115830604,2.0885855e-9,0.0000024079818,0.000042501255,0.0067585786,0.97637004],"study_design_scores_gemma":[0.00039187967,0.00029583048,0.0068603265,0.0033943278,0.00043761882,0.00004590726,0.00028054576,0.0000010703909,0.0000068653353,0.00019412527,0.98785853,0.00023294431],"about_ca_topic_score_codex":0.00005548871,"about_ca_topic_score_gemma":0.00003395269,"teacher_disagreement_score":0.98109996,"about_ca_system_score_codex":0.00026417643,"about_ca_system_score_gemma":0.00032782156,"threshold_uncertainty_score":0.9999863},"labels":[],"label_agreement":null},{"id":"W2784021378","doi":"10.1080/21501203.2017.1421592","title":"Fungicidal versus fungistatic therapy of invasive <i>Candida</i> infection in non-neutropenic adults: a meta-analysis","year":2018,"lang":"en","type":"article","venue":"Mycology&#58 An International Journal on Fungal Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba; Laurentian University; University of Manitoba","funders":"","keywords":"Mucormycosis; Medicine; Odds ratio; Fungicide; Pharmacotherapy; Internal medicine; Antifungal drug; Amphotericin B; Echinocandin; Neutropenia; MEDLINE; Biology; Surgery; Fluconazole; Antifungal; Chemotherapy; Dermatology","score_opus":0.0602263862508146,"score_gpt":0.3733199245868769,"score_spread":0.3130935383360623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2784021378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953249,0.00036887024,0.00028777748,0.00057284674,0.0010508278,0.00032531045,0.00008464932,0.000018010292,0.0019667984],"genre_scores_gemma":[0.996359,0.0012375143,0.00026055385,0.0013655038,0.0005031454,0.000028962706,0.0001026563,0.00001788546,0.00012480664],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99733883,0.00047004785,0.0009186648,0.0005079783,0.00037892658,0.00038552255],"domain_scores_gemma":[0.99732894,0.0005754698,0.00055069645,0.0003567304,0.0010032335,0.00018494259],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008653932,0.00028578204,0.0011718059,0.0010186193,0.000098084216,0.000029473678,0.00036709048,0.000279801,0.0025236728],"category_scores_gemma":[0.00046529036,0.00020776398,0.00091859687,0.00060302904,0.00040176098,0.0002107391,0.000056732802,0.0005916362,0.00007927465],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.036850933,0.0012869877,0.8849899,0.000014048438,0.046041846,0.0002347268,0.00047586364,0.00006604565,0.027668716,0.001019094,0.00023464338,0.00111717],"study_design_scores_gemma":[0.007696087,0.015722603,0.95779234,0.000029105386,0.007966865,0.0001263473,0.00018129734,0.0001551658,0.008598664,0.00045372828,0.000990172,0.00028764238],"about_ca_topic_score_codex":0.0004922898,"about_ca_topic_score_gemma":0.003984958,"teacher_disagreement_score":0.0728024,"about_ca_system_score_codex":0.00028432818,"about_ca_system_score_gemma":0.00028500293,"threshold_uncertainty_score":0.9983882},"labels":[],"label_agreement":null},{"id":"W2785298742","doi":"10.1096/fj.201701145r","title":"Differential susceptibility of Dectin‐1 isoforms to functional inactivation by neutrophil and fungal proteases","year":2018,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institutes of Health; University of Aberdeen; National Institute of General Medical Sciences; Medical Research Council; Wellcome; Royal Society; National Institute for Social Care and Health Research; Alexion Pharmaceuticals; Wellcome Trust","keywords":"Proteases; Aspergillus fumigatus; Neutrophil elastase; Microbiology; Allergic bronchopulmonary aspergillosis; Immune system; Biology; Elastase; Immunology; Aspergillus; Inflammation; Immunoglobulin E; Enzyme; Biochemistry","score_opus":0.019048654101542852,"score_gpt":0.26632988369617294,"score_spread":0.2472812295946301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2785298742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940271,0.000075005686,0.004235038,0.0009007966,0.0001725403,0.0003284279,0.000016999158,0.000013758449,0.00023038496],"genre_scores_gemma":[0.9986283,0.0000173244,0.00012323713,0.00020725788,0.0005795838,0.0000049308596,0.0000060086522,0.000009942442,0.00042338352],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988292,0.00007947308,0.00031285628,0.00018471772,0.00038148748,0.00021226102],"domain_scores_gemma":[0.9990345,0.00007795678,0.00014030436,0.0002252227,0.00033562662,0.00018639218],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039672753,0.00012392712,0.00022272921,0.000058789086,0.00032556767,0.000029948029,0.000077567674,0.00005835057,0.000615708],"category_scores_gemma":[0.00031522743,0.00007182776,0.00008946354,0.0001481348,0.00030011655,0.00012738998,0.000044917408,0.0002981922,0.000011569571],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028151134,0.00019553788,0.21978672,0.000032569806,0.000049107144,0.0000024918227,0.00024281943,4.314315e-7,0.7697738,0.000058545622,0.0021596241,0.00488323],"study_design_scores_gemma":[0.0007864749,0.0011686482,0.7352588,0.00005622463,0.00005825124,0.0001255821,0.00039662255,0.000036032317,0.26151922,0.00038971181,0.00012963101,0.00007475537],"about_ca_topic_score_codex":0.000040996067,"about_ca_topic_score_gemma":0.000057446825,"teacher_disagreement_score":0.5154721,"about_ca_system_score_codex":0.00008816304,"about_ca_system_score_gemma":0.00012376023,"threshold_uncertainty_score":0.6741571},"labels":[],"label_agreement":null},{"id":"W2786692887","doi":"10.1016/j.jinf.2017.12.018","title":"Fluconazole non-susceptible breakthrough candidemia after prolonged low-dose prophylaxis: a prospective FUNGINOS study","year":2018,"lang":"en","type":"article","venue":"Journal of Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Merck Sharp and Dohme; Merck; Fondation Leenaards; Gilead Sciences; Novartis; Hamilton Health Sciences Foundation; Pfizer","keywords":"Fluconazole; Medicine; Candida glabrata; Internal medicine; Mucositis; Gastroenterology; Candida krusei; Prospective cohort study; Fungemia; Mycosis; Surgery; Antifungal; Chemotherapy; Dermatology","score_opus":0.007634834480474252,"score_gpt":0.28998884605881403,"score_spread":0.2823540115783398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2786692887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99623245,0.00011232393,0.000564913,0.00009077392,0.0006219183,0.0011801079,0.0000024070596,0.000031284817,0.0011638504],"genre_scores_gemma":[0.9977468,0.000027989781,0.00017737405,0.00013097761,0.0013830876,0.000040096867,0.0000010409274,0.000024617519,0.00046799658],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981973,0.00009907417,0.0006425277,0.0002699316,0.00050043996,0.00029072436],"domain_scores_gemma":[0.9979231,0.000037722806,0.00039650995,0.00028170855,0.0011890852,0.00017191446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00080148166,0.00020779182,0.000500122,0.00021254028,0.0001431677,0.000040453015,0.000060918766,0.00014619068,0.00027167285],"category_scores_gemma":[0.00029681774,0.0001513811,0.00022879711,0.000430464,0.00014690893,0.00040461094,0.000031854448,0.00059707987,0.00008851296],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049601314,0.0014365609,0.97345144,0.00011353896,0.00021158984,0.00014704732,0.0020034378,0.0000021929013,0.015067174,0.0000024912108,0.00059099693,0.0020133974],"study_design_scores_gemma":[0.0031876245,0.015154055,0.97160274,0.0002640908,0.00019364516,0.00021027369,0.0004248184,0.00003101961,0.008522121,0.00008096467,0.00018573683,0.0001428913],"about_ca_topic_score_codex":0.0001836842,"about_ca_topic_score_gemma":0.00073719316,"teacher_disagreement_score":0.013717494,"about_ca_system_score_codex":0.0004238616,"about_ca_system_score_gemma":0.0003678986,"threshold_uncertainty_score":0.6173142},"labels":[],"label_agreement":null},{"id":"W2787966870","doi":"10.1101/254201","title":"Exposure to the oral host niche yields rapid phenotypic and genotypic diversification in <i>Candida albicans</i>","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Candida albicans; Ploidy; Phenotype; Genotype; Aneuploidy; Loss of heterozygosity; Genetics; Corpus albicans; Host adaptation; Genome; Allele; Chromosome; Gene","score_opus":0.018037774086360932,"score_gpt":0.2363207445944578,"score_spread":0.21828297050809686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2787966870","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926591,0.0024607545,0.0006217085,0.0020083808,0.0005545698,0.0014208573,0.000113978946,0.00011969375,0.00004099421],"genre_scores_gemma":[0.9962651,0.0005561152,0.0011290474,0.0013590488,0.00046627704,0.00012548496,9.017314e-7,0.00006484039,0.000033164382],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972708,0.00017801396,0.0005148825,0.0010749906,0.00043520468,0.0005260822],"domain_scores_gemma":[0.9973464,0.00009137044,0.00021112959,0.0016186981,0.00041209624,0.00032032843],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010342966,0.00045130556,0.00063103135,0.00020241845,0.00020328302,0.000111957,0.00042231497,0.0005239023,0.0001458669],"category_scores_gemma":[0.0004603988,0.00036743702,0.000119563905,0.00056723476,0.00025729148,0.0000923389,0.00042264457,0.00088477513,0.00009177857],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009278877,0.00031745757,0.70593923,0.0007529028,0.00021466207,0.00005962791,0.00023442642,0.0000092294595,0.28791893,0.00023499333,0.0033263816,0.000064262385],"study_design_scores_gemma":[0.0007100522,0.00022619247,0.97637194,0.00038524307,0.00016802724,2.3860878e-8,0.000028208746,0.00004752372,0.013654029,0.0000022953507,0.008008802,0.0003976837],"about_ca_topic_score_codex":0.00021811004,"about_ca_topic_score_gemma":0.00016604866,"teacher_disagreement_score":0.2742649,"about_ca_system_score_codex":0.00029977108,"about_ca_system_score_gemma":0.000547813,"threshold_uncertainty_score":0.99987775},"labels":[],"label_agreement":null},{"id":"W2789020304","doi":"10.1093/mmy/myx006","title":"OUP accepted manuscript","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Social Fund; Astellas Pharma Global Development; Astellas Pharma; European Society for Paediatric Infectious Diseases; Sick Kids Foundation; General Secretariat for Research and Technology","keywords":"Biology","score_opus":0.03768667728001352,"score_gpt":0.3640411717592894,"score_spread":0.3263544944792759,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789020304","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8869562,0.00015253342,0.00028911067,0.01659759,0.00079286227,0.0002021107,0.0000026460182,0.00006934555,0.094937585],"genre_scores_gemma":[0.9887664,0.000086954424,0.00021281936,0.003778716,0.00039351537,0.000013651598,0.000008955588,0.000010546856,0.00672846],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986874,0.00004780905,0.0002271637,0.00028961306,0.00041157554,0.0003364701],"domain_scores_gemma":[0.9986115,0.00009290779,0.00007690705,0.00075365923,0.00007168633,0.00039334287],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045283203,0.00010541579,0.00035532378,0.000037526897,0.00025622896,0.000018370745,0.00033181885,0.00030858448,0.017617837],"category_scores_gemma":[0.004431833,0.00007927087,0.00009806022,0.00003052622,0.00055294717,0.000058181493,0.00014336294,0.0003877166,0.0006395768],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078690785,0.00055125554,0.7568525,0.00014803947,0.00011243004,0.0023710835,0.00014604394,2.527331e-8,0.0059293336,0.0032259854,0.11312103,0.11675538],"study_design_scores_gemma":[0.0013225608,0.00026505606,0.9308045,0.00004012239,0.00003912069,0.000075436204,0.000052199513,0.000057773785,0.00047717826,0.0005107099,0.066273175,0.000082196435],"about_ca_topic_score_codex":0.000055504825,"about_ca_topic_score_gemma":0.00014696499,"teacher_disagreement_score":0.17395198,"about_ca_system_score_codex":0.000043378222,"about_ca_system_score_gemma":0.00020970726,"threshold_uncertainty_score":0.9832802},"labels":[],"label_agreement":null},{"id":"W2789788058","doi":"10.1016/j.healun.2018.02.006","title":"A strategy for prevention of fungal infections in lung transplantation: Role of bronchoalveolar lavage fluid galactomannan and fungal culture","year":2018,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"A.H. Schultz-Stiftung zur Förderung Primatologischer Forschung; Astellas Pharma Canada; Merck; Pfizer","keywords":"Galactomannan; Bronchoalveolar lavage; Lung transplantation; Aspergillosis; Transplantation; Lung; Medicine; Microbiology; Immunology; Biology; Internal medicine","score_opus":0.012668190256388412,"score_gpt":0.3055984613664422,"score_spread":0.29293027111005376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789788058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994077,0.0023000308,0.0029302663,0.00013102751,0.0000420612,0.00035240132,0.00003478626,0.0000041738253,0.00012819734],"genre_scores_gemma":[0.99686944,0.0026547268,0.00029888982,0.000016820624,0.00008794939,0.0000026388816,0.000015868858,0.0000070895844,0.000046565747],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99906987,0.00010532009,0.00044887044,0.00008726653,0.00017668342,0.00011198616],"domain_scores_gemma":[0.9994002,0.00010724976,0.00016458356,0.000070749156,0.00020648185,0.00005074707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005999497,0.00009388691,0.00026559844,0.00010936554,0.00008314759,0.000007808443,0.000033406337,0.000080571146,0.000015045193],"category_scores_gemma":[0.000015203355,0.000065423155,0.000083951614,0.00010701529,0.00012273894,0.00022165332,0.0000018539561,0.00015294216,1.3348748e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0077877506,0.00025787426,0.48172808,0.0023433953,0.0001392672,0.0000068681506,0.012108942,0.000031633,0.49432096,0.00023844559,0.00012260825,0.00091416616],"study_design_scores_gemma":[0.0031179173,0.002342861,0.93629533,0.0007640345,0.0007907782,0.0005717,0.0011291989,0.0006680402,0.05385945,0.00032705037,0.00005368084,0.00007996558],"about_ca_topic_score_codex":0.000040339557,"about_ca_topic_score_gemma":0.00044449975,"teacher_disagreement_score":0.45456725,"about_ca_system_score_codex":0.0000137671095,"about_ca_system_score_gemma":0.0000728049,"threshold_uncertainty_score":0.2667879},"labels":[],"label_agreement":null},{"id":"W2789815358","doi":"10.1097/inf.0000000000001968","title":"Invasive Fungal Infections in Neonates in Canada","year":2018,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Saint John Regional Hospital; Mount Sinai Hospital; Regina General Hospital; University of Toronto; Moncton Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Necrotizing enterocolitis; Candida parapsilosis; Odds ratio; Incidence (geometry); Fungemia; Retinopathy of prematurity; Population; Gestation; Cohort; Neonatal intensive care unit; Apgar score; Retrospective cohort study; Cohort study; Pediatrics; Obstetrics; Birth weight; Gestational age; Internal medicine; Pregnancy; Mycosis; Surgery; Biology","score_opus":0.0077809002106274784,"score_gpt":0.23857286135867406,"score_spread":0.2307919611480466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789815358","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99587125,0.00061837264,0.00002403149,0.0007657988,0.0005279968,0.00025357635,0.00000915777,0.000016992724,0.0019128517],"genre_scores_gemma":[0.9970894,0.00076529104,0.000006029255,0.00061667204,0.0013805571,0.000012018923,0.0000016109047,0.000014120568,0.0001143398],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985216,0.00015744165,0.00039761091,0.00017935062,0.00034265613,0.00040132744],"domain_scores_gemma":[0.9987984,0.0003242056,0.00012050314,0.00023027243,0.00020301178,0.00032365732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004414841,0.00014911988,0.00022549795,0.0002546534,0.00025987672,0.0000320054,0.00010423628,0.000043095824,0.00038622538],"category_scores_gemma":[0.0011719659,0.00010423988,0.000097545104,0.00077072135,0.00008665095,0.00012192864,0.000037892125,0.00066908693,0.000038908387],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002094773,0.00017833778,0.9969548,0.00003285784,0.00001494265,0.00034165249,0.00015562623,0.0000791177,0.000013820179,0.000025801184,0.0015790472,0.00041450912],"study_design_scores_gemma":[0.001186694,0.00014619001,0.99638957,0.00003075027,0.000103634426,0.00037429662,0.000251239,0.000114998875,0.000009109946,0.001145937,0.00013274302,0.000114850656],"about_ca_topic_score_codex":0.27916476,"about_ca_topic_score_gemma":0.92741585,"teacher_disagreement_score":0.64825106,"about_ca_system_score_codex":0.0011729619,"about_ca_system_score_gemma":0.0066567413,"threshold_uncertainty_score":0.9989746},"labels":[],"label_agreement":null},{"id":"W2790579993","doi":"10.1097/inf.0000000000001913","title":"Antifungal Susceptibility and Clinical Outcome in Neonatal Candidiasis","year":2018,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Research Resources","keywords":"Invasive candidiasis; Antifungal; Medicine; Intensive care medicine; Outcome (game theory); Echinocandins; Microbiology; Pediatrics; Biology; Dermatology; Fluconazole; Caspofungin; Mathematics","score_opus":0.024909604589732494,"score_gpt":0.34367522365221415,"score_spread":0.31876561906248163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790579993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967839,0.00083309656,0.00014435756,0.0005775845,0.00068979035,0.00032594966,0.000014467641,0.000042298303,0.00058852613],"genre_scores_gemma":[0.9950905,0.0010484532,0.000037017948,0.00048214244,0.003165893,0.0000034415864,0.0000020637078,0.000018675466,0.00015185558],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99765754,0.00033443744,0.000818182,0.00035075692,0.00040080768,0.0004382974],"domain_scores_gemma":[0.99811804,0.00039244533,0.00020185644,0.0004201152,0.00024497785,0.00062258594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022544218,0.00020226743,0.00041371194,0.00016985305,0.00040049088,0.000086716536,0.00012846958,0.000112797876,0.00040234532],"category_scores_gemma":[0.0020588755,0.00013000295,0.00028259002,0.00039795937,0.0004863939,0.00019284782,0.00008567119,0.00090629933,0.00006545284],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008272366,0.0002379859,0.9943727,0.00005062089,0.00003428407,0.00016168733,0.00014885313,6.017611e-7,0.0000053603017,0.00002237708,0.0006180709,0.0035201702],"study_design_scores_gemma":[0.0018438939,0.00041784692,0.99573594,0.000014235372,0.00039186561,0.00032314035,0.00016398805,0.000113071736,0.0000019361455,0.0007101111,0.00014073457,0.00014324686],"about_ca_topic_score_codex":0.00011190823,"about_ca_topic_score_gemma":0.0005804817,"teacher_disagreement_score":0.0033769233,"about_ca_system_score_codex":0.0001621119,"about_ca_system_score_gemma":0.000523085,"threshold_uncertainty_score":0.53013664},"labels":[],"label_agreement":null},{"id":"W2790838155","doi":"10.1177/2292550317716119","title":"Aggressive Combined Medical and Surgical Management of Mucormycosis Results in Disease Eradication in 2 Pediatric Patients","year":2017,"lang":"en","type":"article","venue":"Plastic Surgery","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; McMaster University","funders":"","keywords":"Mucormycosis; Medicine; Paranasal sinuses; Surgery; Cellulitis; Chemotherapy; Nose; Orbit (dynamics)","score_opus":0.017295614507430234,"score_gpt":0.27698519967930896,"score_spread":0.25968958517187873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790838155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988028,0.00023786737,0.0000043423247,0.00025527674,0.00030164965,0.00015948822,0.000019759715,0.0000071565673,0.00021167185],"genre_scores_gemma":[0.99827045,0.001570579,0.000013489429,0.000008463143,0.00003691315,0.00001561834,0.000057269513,0.0000064077876,0.000020795085],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99852496,0.00005534465,0.0004911971,0.0002716159,0.0004719307,0.00018495134],"domain_scores_gemma":[0.9965035,0.00260271,0.00028831014,0.00032587195,0.000052042622,0.00022761767],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0005446449,0.00009790462,0.0003280584,0.00017303995,0.000044250475,0.000009420689,0.00007632575,0.00006805041,0.000032372747],"category_scores_gemma":[0.009934934,0.00008320406,0.000052318686,0.00011617267,0.00012482103,0.0000741332,0.000069915215,0.0001231682,0.000004606646],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029993504,0.0005602543,0.99116683,0.00042460012,0.000010857939,0.0009870692,0.000031463733,6.0674273e-7,3.3312241e-7,0.000028765482,0.00016599358,0.0036238602],"study_design_scores_gemma":[0.0028511393,0.000037236838,0.995884,0.0007213072,0.000045046825,9.3294256e-7,0.00001558369,0.0003150426,0.000002965231,0.00003180343,0.000023294426,0.00007166313],"about_ca_topic_score_codex":0.0000362561,"about_ca_topic_score_gemma":0.000043365977,"teacher_disagreement_score":0.009390289,"about_ca_system_score_codex":0.000043172164,"about_ca_system_score_gemma":0.00010755729,"threshold_uncertainty_score":0.9984048},"labels":[],"label_agreement":null},{"id":"W2791084930","doi":"10.1128/jcm.01481-17","title":"Evaluation of the Copan ESwab Transport System for Viability of Pathogenic Fungi by Use of a Modification of Clinical and Laboratory Standards Institute Document M40-A2","year":2017,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; University Health Network","funders":"","keywords":"Homogeneous; Clinical microbiology; Turbidity; Agar; Biology; Microbiology; Mathematics; Ecology; Bacteria","score_opus":0.1328478360865584,"score_gpt":0.4551283200886645,"score_spread":0.32228048400210607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791084930","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99597436,0.00069262646,0.00082533393,0.00022809497,0.00059117243,0.00072557514,0.00094516476,0.0000017171295,0.00001597284],"genre_scores_gemma":[0.9988764,0.0003406994,0.0006441948,0.000025874937,0.00008012955,0.0000032991136,0.00001187962,0.000006763908,0.000010753359],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99451244,0.0009532093,0.0038270012,0.00023371214,0.00035149683,0.00012213938],"domain_scores_gemma":[0.9896463,0.0008870934,0.0043235556,0.00067796157,0.0043722107,0.00009286212],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.022482302,0.00011566878,0.0014648461,0.000037840346,0.000051264033,0.00000335404,0.00023633763,0.00033075435,0.000011223767],"category_scores_gemma":[0.009848266,0.00007241472,0.0005816506,0.000054611603,0.0015516473,0.00013507818,0.000033112767,0.00030264317,9.982929e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0055639404,0.000674594,0.7206443,0.00076539355,0.0003624017,6.696582e-7,0.00006534682,0.000013639688,0.26529604,0.00010980506,0.000216077,0.0062877685],"study_design_scores_gemma":[0.0064107273,0.0020715245,0.96062684,0.0005774303,0.001448559,0.000009693778,0.00010205146,0.00008047631,0.026988273,0.00013645095,0.0014791242,0.000068837486],"about_ca_topic_score_codex":0.000022607834,"about_ca_topic_score_gemma":0.00006782521,"teacher_disagreement_score":0.23998255,"about_ca_system_score_codex":0.00006651391,"about_ca_system_score_gemma":0.0018476875,"threshold_uncertainty_score":0.9984922},"labels":[],"label_agreement":null},{"id":"W2791102641","doi":"10.3390/ijms19020434","title":"Photodynamic Inactivation Potentiates the Susceptibility of Antifungal Agents against the Planktonic and Biofilm Cells of Candida albicans","year":2018,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Merck Canada","keywords":"Biofilm; Candida albicans; Caspofungin; Microbiology; Fluconazole; Corpus albicans; Miconazole; Azole; Antifungal drug; Nystatin; Chemistry; Amphotericin B; Biology; Antifungal; Bacteria","score_opus":0.01427687380193497,"score_gpt":0.29557020580356125,"score_spread":0.28129333200162626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791102641","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973607,0.00025740435,0.00041555712,0.0009726685,0.0002855481,0.00011151779,0.000014448343,0.0000017678256,0.00058035686],"genre_scores_gemma":[0.9992655,0.00015820435,0.00023846822,0.0002550026,0.00005281637,4.5958197e-7,0.0000015008969,0.0000031061213,0.000024975096],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984805,0.0000705794,0.0004073122,0.00013188146,0.000802822,0.000106897285],"domain_scores_gemma":[0.99857044,0.000118620344,0.00046292137,0.00014102287,0.0006671447,0.000039831502],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011100614,0.000076985794,0.00016918888,0.00010377225,0.00009126367,0.00002750891,0.00040274355,0.000033068543,0.000056253437],"category_scores_gemma":[0.00022057009,0.000039820046,0.00011045091,0.00019610452,0.0013169841,0.0001184688,0.000057599354,0.0001258836,6.879692e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023237495,0.00009901614,0.08959915,0.000014651373,0.00011942642,0.000013202405,0.00039874765,0.000035305136,0.9073529,0.00024889404,0.00007781801,0.0018084703],"study_design_scores_gemma":[0.00051810755,0.000579655,0.4497387,0.00016577961,0.000058712692,0.00004822077,0.0013405317,0.0012387416,0.545681,0.00046305597,0.00010894523,0.00005852731],"about_ca_topic_score_codex":0.00014136871,"about_ca_topic_score_gemma":0.00011428274,"teacher_disagreement_score":0.36167192,"about_ca_system_score_codex":0.000044640587,"about_ca_system_score_gemma":0.00026002855,"threshold_uncertainty_score":0.48524827},"labels":[],"label_agreement":null},{"id":"W2791128600","doi":"10.1093/mmy/myx157","title":"The effect of melatonin on antifungal susceptibility in planktonic and biofilm forms of<i>Candida</i>strains isolated from clinical samples","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biofilm; Fluconazole; Microbiology; Melatonin; Broth microdilution; Antifungal; Biology; Minimum inhibitory concentration; Antibiotics; Bacteria","score_opus":0.021938901195255614,"score_gpt":0.351278666696469,"score_spread":0.3293397655012134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791128600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965423,0.0004354161,0.000022780448,0.0011364444,0.00028052556,0.0004959974,0.00006638945,0.00001506492,0.0010050796],"genre_scores_gemma":[0.99910504,0.00056779856,0.000039328777,0.000119924654,0.00008212974,0.0000099632725,0.000024181049,0.000011392066,0.00004023625],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99738336,0.00037298782,0.0009393636,0.0004717512,0.00044702008,0.00038551405],"domain_scores_gemma":[0.99413806,0.0043192953,0.0003428893,0.00089245214,0.000055552286,0.00025176705],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0035866874,0.00019274186,0.0010576074,0.000056168145,0.00015367896,0.000011536939,0.00035689404,0.00055738527,0.00025002682],"category_scores_gemma":[0.010969197,0.00010735253,0.00018929067,0.0000736538,0.0026235674,0.000044893084,0.00014770556,0.0007945072,0.000007631394],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043657557,0.0001999522,0.97255135,0.000092234644,0.0000990931,0.000067393,0.00005794738,8.574439e-8,0.0034789613,0.00050982455,0.00018589977,0.018391479],"study_design_scores_gemma":[0.0041550216,0.004490089,0.9866423,0.0002189234,0.00007708969,0.000008953689,0.000055148794,0.00021138553,0.0032919364,0.0005049174,0.0002558115,0.0000884021],"about_ca_topic_score_codex":0.00056794187,"about_ca_topic_score_gemma":0.003619041,"teacher_disagreement_score":0.018303078,"about_ca_system_score_codex":0.000039882547,"about_ca_system_score_gemma":0.00026441558,"threshold_uncertainty_score":0.99736184},"labels":[],"label_agreement":null},{"id":"W2791396313","doi":"10.1128/aac.01916-17","title":"Posaconazole MIC Distributions for Aspergillus fumigatus Species Complex by Four Methods: Impact of <i>cyp51A</i> Mutations on Estimation of Epidemiological Cutoff Values","year":2018,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario","funders":"","keywords":"Etest; Posaconazole; Population; Aspergillus fumigatus; Biology; Microbiology; Medicine; Antifungal; Voriconazole; Antibiotics","score_opus":0.06121063341992394,"score_gpt":0.40132754131423776,"score_spread":0.3401169078943138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791396313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9644523,0.000030709743,0.03272919,0.0012171575,0.000045537206,0.00043785133,0.00087276404,0.000018730318,0.00019571053],"genre_scores_gemma":[0.9831973,0.00022042115,0.014906006,0.0009602397,0.00006565302,0.000005057827,0.00042830623,0.000012970296,0.00020405998],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99896955,0.00006222028,0.00040995848,0.00025140942,0.0000930248,0.00021385564],"domain_scores_gemma":[0.99910223,0.00024117803,0.0001901044,0.00019083256,0.00019727161,0.00007834967],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029825725,0.00016905199,0.00050599466,0.00004246466,0.00013677613,0.000009320477,0.00007061133,0.000104344435,0.0002251146],"category_scores_gemma":[0.00018668729,0.00012086464,0.00026598116,0.00011784484,0.0005044529,0.000048685648,0.000013284912,0.00007386052,0.0000024830197],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014471862,0.00074209424,0.04857786,0.00014059414,0.00032273406,8.0942766e-7,0.0003062042,0.000023879893,0.86144996,0.0005079106,0.07634666,0.0101340925],"study_design_scores_gemma":[0.0023277486,0.00171885,0.7512493,0.00012765323,0.0001223143,0.000009064834,0.000069014415,0.0028413145,0.2379577,0.0012487957,0.002149541,0.00017869157],"about_ca_topic_score_codex":0.00007114587,"about_ca_topic_score_gemma":0.000004119766,"teacher_disagreement_score":0.70267147,"about_ca_system_score_codex":0.00004892983,"about_ca_system_score_gemma":0.000052324533,"threshold_uncertainty_score":0.4928717},"labels":[],"label_agreement":null},{"id":"W2791675512","doi":"10.7554/elife.34798","title":"Integrin-based diffusion barrier separates membrane domains enabling the formation of microbiostatic frustrated phagosomes","year":2018,"lang":"en","type":"article","venue":"eLife","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto; Hospital for Sick Children","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Natural Sciences and Engineering Research Council of Canada; Heart and Stroke Foundation of Canada","keywords":"Phagosome; Cell biology; Internalization; Fluorescence recovery after photobleaching; Biology; Endomembrane system; Chemistry; Phagocytosis; Membrane; Biophysics; Cell; Biochemistry; Endoplasmic reticulum; Golgi apparatus","score_opus":0.016869316009909006,"score_gpt":0.28906569869530413,"score_spread":0.27219638268539514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791675512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996717,0.00018884188,0.0010929635,0.00046541877,0.00008722292,0.00033330428,0.000018092092,0.000036514277,0.0010606823],"genre_scores_gemma":[0.9981956,0.000042882868,0.00035681855,0.00074358203,0.00010074049,0.00000601474,0.000042570282,0.000010661788,0.000501116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999028,0.000063055755,0.0003288516,0.00015177773,0.00024391782,0.00018437835],"domain_scores_gemma":[0.9990714,0.0001369196,0.00011703858,0.00029518112,0.00030984945,0.00006960941],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035620647,0.00011725813,0.00021827617,0.00006186441,0.0001347212,0.000015447826,0.0000880397,0.00006923557,0.0003408816],"category_scores_gemma":[0.00029831572,0.00006932535,0.00008536156,0.00023016565,0.00024062544,0.000088558656,0.000017185323,0.00013548286,0.00006297214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005353469,0.00011641447,0.011453763,0.00019444177,0.000026384725,0.0000038796647,0.00112713,0.0000047677154,0.9845913,0.00006939656,0.0011679066,0.00070929335],"study_design_scores_gemma":[0.0011048163,0.00025902264,0.01846449,0.00019905365,0.000062276384,0.0000042206075,0.001209097,0.0025513226,0.9739269,0.000027563403,0.002105092,0.00008611319],"about_ca_topic_score_codex":0.000041857205,"about_ca_topic_score_gemma":0.00012006648,"teacher_disagreement_score":0.010664345,"about_ca_system_score_codex":0.000045370794,"about_ca_system_score_gemma":0.00013736998,"threshold_uncertainty_score":0.37324145},"labels":[],"label_agreement":null},{"id":"W2792444559","doi":"10.3389/fmicb.2017.02706","title":"The Aspergillus fumigatus Sialidase (Kdnase) Contributes to Cell Wall Integrity and Virulence in Amphotericin B-Treated Mice","year":2018,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Simon Fraser University","funders":"Canadian Glycomics Network; Natural Sciences and Engineering Research Council of Canada","keywords":"Aspergillus fumigatus; Virulence; Microbiology; Amphotericin B; Sialidase; Biology; Aspergillus; Pathogenic organism; Antifungal; Virology; Gene; Neuraminidase; Biochemistry; Virus","score_opus":0.007368862744394582,"score_gpt":0.24851710340045166,"score_spread":0.24114824065605708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792444559","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994124,0.0025882414,0.0004140881,0.00150883,0.00046081323,0.00052713125,0.00004673722,0.000021185562,0.00030898352],"genre_scores_gemma":[0.9958334,0.00036073464,0.0013574131,0.0017262421,0.000043864267,0.000015594329,0.000035193832,0.000012105278,0.0006154281],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9983649,0.0002265711,0.00038311552,0.00047573666,0.000041765954,0.0005079131],"domain_scores_gemma":[0.9992494,0.00014748322,0.00006152474,0.00032782156,0.00011475536,0.000099032724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058557116,0.00019652596,0.0004699382,0.00014370655,0.00010829512,0.00002018085,0.00017941078,0.00024333019,0.000017960876],"category_scores_gemma":[0.00035484994,0.00013700817,0.00004943245,0.00034490554,0.00073348853,0.000037485173,0.00009011103,0.00044006246,0.00002838764],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016052113,0.00009485373,0.43703333,0.000026789308,0.0000184861,0.0000394784,0.00034608858,1.9155053e-7,0.549545,0.000020875483,0.009531536,0.001738204],"study_design_scores_gemma":[0.004924149,0.0012657986,0.6148406,0.00033986362,0.00006808476,0.00004636831,0.0022116753,0.00019836857,0.31019843,0.0006365937,0.06478675,0.00048327813],"about_ca_topic_score_codex":0.000845454,"about_ca_topic_score_gemma":0.0034321574,"teacher_disagreement_score":0.23934655,"about_ca_system_score_codex":0.00025785982,"about_ca_system_score_gemma":0.0000973686,"threshold_uncertainty_score":0.5587031},"labels":[],"label_agreement":null},{"id":"W2792804650","doi":"10.14745/ccdr.v43i78a02","title":"First reported case of multidrug-resistant Candida auris in Canada","year":2017,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"Diagnostic Services Manitoba","keywords":"Candida auris; Medicine; Fluconazole; Otitis; Intensive care medicine; Infection control; Brain abscess; Ear infection; Surgery; Pediatrics; Abscess; Antifungal; Dermatology","score_opus":0.025405850389753886,"score_gpt":0.2852344047606145,"score_spread":0.2598285543708606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792804650","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99115497,0.0010798885,0.000002124721,0.0012645156,0.00016330378,0.00043265425,0.00018699505,0.000012082328,0.0057034562],"genre_scores_gemma":[0.9981059,0.00011826217,0.000081245445,0.00015516958,0.00001985353,0.000027373006,0.00009720303,0.00002622395,0.0013687613],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99743104,0.000066555775,0.001054764,0.0004032385,0.0005977752,0.00044661784],"domain_scores_gemma":[0.99301964,0.00014944177,0.0007451821,0.005018636,0.000326043,0.0007410542],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047767817,0.00023156493,0.00071678765,0.000048711805,0.0005400384,0.000023222272,0.0004027836,0.000052970547,0.000119150376],"category_scores_gemma":[0.0025421276,0.00022064077,0.000115898605,0.00011692217,0.00020516063,0.00009920345,0.00022271735,0.00032819455,2.9744686e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037501502,0.000088640154,0.71949023,0.00029000823,0.000074745934,0.27482438,0.000020945554,0.00003238938,0.000065577144,0.000012053883,0.004564097,0.00016192006],"study_design_scores_gemma":[0.0009935328,0.000017987119,0.9825792,0.00044009803,0.0001607439,0.0015037592,0.00066536997,0.00095106685,0.00020434619,0.000018362181,0.012217076,0.00024847678],"about_ca_topic_score_codex":0.99995524,"about_ca_topic_score_gemma":0.9999967,"teacher_disagreement_score":0.27332062,"about_ca_system_score_codex":0.0023613246,"about_ca_system_score_gemma":0.036574263,"threshold_uncertainty_score":0.96888745},"labels":[],"label_agreement":null},{"id":"W2793667568","doi":"10.1111/petr.13172","title":"Isolated cutaneous mucormycosis in a pediatric renal transplant recipient","year":2018,"lang":"en","type":"article","venue":"Pediatric Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Montreal Children's Hospital; Hospital for Sick Children","funders":"","keywords":"Mucormycosis; Medicine; Kidney transplantation; Antifungal; Renal transplant; Surgery; Transplantation; Kidney; Organ transplantation; Dermatology; Internal medicine","score_opus":0.012233771548333511,"score_gpt":0.2587587550002069,"score_spread":0.24652498345187338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793667568","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932855,0.00034452867,0.0036998144,0.00015524245,0.00025315015,0.0004760674,0.00006611533,0.00010355579,0.0016160525],"genre_scores_gemma":[0.981802,0.016295275,0.0005090204,0.00013571694,0.0008580629,0.00002383328,0.00023275217,0.000025407666,0.00011796386],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99795294,0.00007395315,0.0006128328,0.0004918589,0.00042580353,0.00044262217],"domain_scores_gemma":[0.99920654,0.00013364498,0.00010424034,0.00024282634,0.00013316184,0.00017959009],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002706181,0.00022943116,0.00032304187,0.00044812282,0.000101728714,0.000017946293,0.00010179112,0.00019353282,0.00029179364],"category_scores_gemma":[0.000035471705,0.0002089885,0.00012580752,0.0010290896,0.00005346434,0.00014284665,0.0000045862066,0.00029175365,0.00015067536],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029379725,0.0002692784,0.9922941,0.0003402817,0.00001113023,0.0005782435,0.0016879296,0.000005979018,0.0007597907,0.000025502524,0.00019208062,0.0008977551],"study_design_scores_gemma":[0.0020988928,0.00077745283,0.9943648,0.00004697811,0.00069207355,0.00038343077,0.000016584223,0.00055825646,0.0006591301,0.00006848728,0.000078270496,0.00025563347],"about_ca_topic_score_codex":0.00016258127,"about_ca_topic_score_gemma":0.00088848843,"teacher_disagreement_score":0.015950745,"about_ca_system_score_codex":0.00010625716,"about_ca_system_score_gemma":0.00019052054,"threshold_uncertainty_score":0.85223037},"labels":[],"label_agreement":null},{"id":"W2793761761","doi":"10.3389/fmicb.2018.00218","title":"NSG2 (ORF19.273) Encoding Protein Controls Sensitivity of Candida albicans to Azoles through Regulating the Synthesis of C14-Methylated Sterols","year":2018,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Concordia University; National Natural Science Foundation of China","keywords":"Ergosterol; Azole; Candida albicans; Corpus albicans; Fluconazole; Sterol; Microbiology; In vivo; Chemistry; Yeast; Biology; Mutant; Biochemistry; Antifungal; Gene; Cholesterol; Genetics","score_opus":0.013022789915699239,"score_gpt":0.2655664514237046,"score_spread":0.2525436615080054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793761761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876511,0.00026404037,0.00948956,0.0007549548,0.00020921271,0.0009935871,0.00008812198,0.000017136606,0.00053226633],"genre_scores_gemma":[0.9891427,0.000013162771,0.0102883745,0.00026865653,0.00007701022,0.000025064071,0.000009362167,0.00001632913,0.00015934533],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980669,0.00046669395,0.0006048321,0.00037498566,0.000088422916,0.0003981672],"domain_scores_gemma":[0.9986067,0.00038174263,0.0002659891,0.00048536106,0.00020986449,0.00005035807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013824034,0.00018956854,0.0008607829,0.000110071356,0.000081590515,0.000004865763,0.00014709774,0.00020589984,0.00004574427],"category_scores_gemma":[0.0012763847,0.00013450523,0.00012835613,0.00030474254,0.0008305384,0.000050406336,0.00007670048,0.00021737417,0.0000036725626],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010340611,0.00006235873,0.0965898,0.000096961725,0.00011567594,0.000007823469,0.0011583794,0.0000056447184,0.8969183,0.000048751794,0.0006636443,0.0032986167],"study_design_scores_gemma":[0.0009766971,0.00041324316,0.03815385,0.00061478687,0.00009364234,0.000019070001,0.0018581668,0.00016714707,0.9564359,0.0002452475,0.00084558944,0.00017665733],"about_ca_topic_score_codex":0.0007199711,"about_ca_topic_score_gemma":0.00097646954,"teacher_disagreement_score":0.059517626,"about_ca_system_score_codex":0.00011418316,"about_ca_system_score_gemma":0.00012234563,"threshold_uncertainty_score":0.5484964},"labels":[],"label_agreement":null},{"id":"W2793884909","doi":"10.1016/j.cmi.2018.01.002","title":"Diagnosis and management of Aspergillus diseases: executive summary of the 2017 ESCMID-ECMM-ERS guideline","year":2018,"lang":"en","type":"article","venue":"Clinical Microbiology and Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1518,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Institute of Infection and Immunity","funders":"Medical Research Council; Centre Hospitalier Universitaire Vaudois; Amplyx; Actelion Pharmaceuticals; European Society of Clinical Microbiology and Infectious Diseases; Cidara Therapeutics; Wellcome Trust; Duke University","keywords":"Posaconazole; Medicine; Voriconazole; Guideline; Intensive care medicine; Bronchoalveolar lavage; Aspergillosis; Caspofungin; Internal medicine; Pathology; Immunology; Dermatology; Antifungal; Lung","score_opus":0.03331092991611365,"score_gpt":0.359223218912677,"score_spread":0.3259122889965633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793884909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99666655,0.0010033646,0.00009387318,0.00040307228,0.00033641697,0.00028647739,0.00003432626,0.000008414412,0.0011674871],"genre_scores_gemma":[0.9912414,0.007815137,0.00012559182,0.0003868023,0.00008183296,0.0000058857677,0.000016949876,0.000003730271,0.00032270243],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99907523,0.000120436234,0.00045871263,0.00022504826,0.00002395386,0.00009663192],"domain_scores_gemma":[0.9992895,0.00016346114,0.00015770801,0.00021319259,0.00012834703,0.000047803962],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038278353,0.00008003727,0.0002864,0.000024033145,0.00007464411,0.0000016591505,0.000036952704,0.00014340218,0.00003859806],"category_scores_gemma":[0.00025307224,0.000050361596,0.000109810906,0.0000732666,0.0014111395,0.0000302317,0.000095796866,0.000109402434,0.0000025292827],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046991347,0.00023288667,0.9738033,0.00016492847,0.00014671497,0.0000012598595,0.000023969142,1.0143568e-7,0.003353481,0.00017100046,0.013326475,0.008305982],"study_design_scores_gemma":[0.00088256155,0.00070044684,0.9757907,0.00023261792,0.00026439884,0.0000075133426,0.000052230916,0.000006367671,0.00197437,0.00019063342,0.019843752,0.000054452004],"about_ca_topic_score_codex":0.000037147565,"about_ca_topic_score_gemma":0.000057182482,"teacher_disagreement_score":0.00825153,"about_ca_system_score_codex":0.000011728807,"about_ca_system_score_gemma":0.000022687953,"threshold_uncertainty_score":0.51994026},"labels":[],"label_agreement":null},{"id":"W2794056701","doi":"10.1128/aac.00375-18","title":"Erratum for Chen et al., “Chemogenomic Profiling of the Fungal Pathogen <i>Candida albicans</i> ”","year":2018,"lang":"en","type":"erratum","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Candida albicans; Fungal pathogen; Pathogen; Microbiology; Chen; Profiling (computer programming); Biology; Computational biology; Computer science; Ecology; Programming language","score_opus":0.01671769251039452,"score_gpt":0.2844674572198513,"score_spread":0.2677497647094568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794056701","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9072168,0.001789453,0.00038874906,0.039845187,0.016078956,0.0072938567,0.0034485376,0.00014623381,0.023792233],"genre_scores_gemma":[0.27500132,0.019206068,0.004136477,0.29281396,0.0043654377,0.00014433364,0.0029441186,0.00069431844,0.40069398],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99776465,0.000060912796,0.00060186646,0.00076020707,0.00031315384,0.00049919833],"domain_scores_gemma":[0.99838763,0.00003891567,0.00043925078,0.0007445803,0.00026249973,0.00012714726],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00042210665,0.0005029966,0.0009541165,0.0000667516,0.00021489205,0.000047687485,0.00033737274,0.00048722108,0.00015506531],"category_scores_gemma":[0.00005085996,0.00034956072,0.00055573136,0.00016177369,0.0004425251,0.00005852226,0.000102072794,0.00058959017,0.000004676686],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068724126,0.00019818306,0.0136095155,0.0006474135,0.00030211548,0.0000035664293,0.00025526035,7.435941e-8,0.071711585,0.000017142727,0.9118158,0.000752069],"study_design_scores_gemma":[0.0024795567,0.0003060854,0.020316843,0.0007919737,0.00028487755,0.000027221891,0.00006108834,0.000027934377,0.022855524,0.0000811704,0.9523428,0.00042492454],"about_ca_topic_score_codex":0.000059653303,"about_ca_topic_score_gemma":0.000059988746,"teacher_disagreement_score":0.6322155,"about_ca_system_score_codex":0.000078146564,"about_ca_system_score_gemma":0.0006330337,"threshold_uncertainty_score":0.99989563},"labels":[],"label_agreement":null},{"id":"W2794427305","doi":"10.1016/j.sjopt.2018.02.001","title":"Blastomyces species and orbital apex syndrome: Unsuspected co-infection","year":2018,"lang":"en","type":"article","venue":"Saudi Journal of Ophthalmology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Diagnostic Services Manitoba","funders":"","keywords":"Blastomyces dermatitidis; Medicine; Pathology; Mucormycosis; Dimorphic fungus; Amphotericin B; Microbiology; Biology; Blastomycosis; Dermatology; Yeast; Antifungal","score_opus":0.02575478660387523,"score_gpt":0.3205350366949229,"score_spread":0.2947802500910477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794427305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98396665,0.00049439445,0.00006415866,0.00029952257,0.0004137657,0.00009306788,0.0000034305187,0.0000112313855,0.014653795],"genre_scores_gemma":[0.9974606,0.00007731613,0.0003610936,0.000030158046,0.0003979614,6.075784e-7,0.000002053037,0.000011969783,0.001658216],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99889326,0.00008206862,0.00041194225,0.00016784243,0.0002211611,0.00022372932],"domain_scores_gemma":[0.99893993,0.00010649018,0.00026275063,0.00014733631,0.00039704473,0.0001464499],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037411007,0.00013034418,0.00045014027,0.00017304541,0.000103368344,0.0000151256245,0.00006095575,0.00012469658,0.0015403845],"category_scores_gemma":[0.00034180144,0.00009965047,0.00010689821,0.00017393276,0.00059672026,0.00012661198,0.000025297533,0.00028968955,0.000044622793],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011345171,0.00017713828,0.96712244,0.00008460655,0.00016253491,0.00788052,0.00015067807,1.9903405e-7,0.021771003,0.00011809856,0.0011510897,0.0002471502],"study_design_scores_gemma":[0.0007390251,0.0033104694,0.8011396,0.00007667354,0.00006721561,0.19110598,0.00011494603,0.000003015767,0.0024684086,0.00037764932,0.0005252733,0.000071755596],"about_ca_topic_score_codex":0.0000136955205,"about_ca_topic_score_gemma":0.000003794494,"teacher_disagreement_score":0.18322547,"about_ca_system_score_codex":0.00006783327,"about_ca_system_score_gemma":0.000113527254,"threshold_uncertainty_score":0.99937236},"labels":[],"label_agreement":null},{"id":"W2794593110","doi":"10.1016/j.mib.2018.02.005","title":"Antifungal drug resistance: evolution, mechanisms and impact","year":2018,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":511,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Grant Foundation; Foundation for the National Institutes of Health","keywords":"Biology; Antifungal; Drug resistance; Antifungal drugs; Drug; Antimicrobial; Antifungal drug; Intensive care medicine; Antibiotic resistance; Disease; Infectious disease (medical specialty); Fungal disease; Biotechnology; Computational biology; Microbiology; Antibiotics; Pharmacology; Medicine","score_opus":0.05764659544332327,"score_gpt":0.4000735242575,"score_spread":0.3424269288141767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794593110","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001508228,0.9941198,0.00029823472,0.0000356767,0.0038623884,0.0010866305,0.0003058558,0.00004602294,0.000094562805],"genre_scores_gemma":[0.00022947918,0.99706566,0.00026852096,0.000008987013,0.0005526473,0.000046984223,0.001192809,0.000044516702,0.0005903677],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99698794,0.0004053367,0.00095569674,0.0009825741,0.00009452524,0.00057394727],"domain_scores_gemma":[0.9985513,0.00016197558,0.00035995714,0.0006118349,0.00015447504,0.00016046401],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007327352,0.00055839855,0.002097565,0.0003976817,0.00009974003,0.000020601281,0.00021101611,0.00052206917,0.00020857232],"category_scores_gemma":[0.00020025745,0.00041247948,0.0004979143,0.00042906564,0.00044982205,0.00005780479,0.00015243237,0.00081062876,0.0001589955],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00086397777,0.0012301411,0.006889218,0.23270166,0.0006839404,0.00002362366,0.00032068676,7.6363705e-8,0.000559467,0.0066824467,0.4491259,0.30091888],"study_design_scores_gemma":[0.0005508609,0.000103706014,0.00060960994,0.027591338,0.0001709024,0.0001192279,0.000018128376,6.5987155e-7,0.0000021763747,0.00046104498,0.97000176,0.00037059252],"about_ca_topic_score_codex":0.000009202273,"about_ca_topic_score_gemma":0.000026354934,"teacher_disagreement_score":0.5208759,"about_ca_system_score_codex":0.0005540667,"about_ca_system_score_gemma":0.0007720184,"threshold_uncertainty_score":0.9998327},"labels":[],"label_agreement":null},{"id":"W2794825758","doi":"10.1139/cjm-2017-0749","title":"The pathogenicity of <i>Aspergillus fumigatus</i>, drug resistance, and nanoparticle delivery","year":2018,"lang":"en","type":"review","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Food and Agriculture; U.S. Department of Agriculture","keywords":"Aspergillosis; Aspergillus fumigatus; Biology; Drug resistance; Aspergillus; Virulence; Context (archaeology); Antifungal drug; Microbiology; Biotechnology; Immunology; Antifungal","score_opus":0.01935698155256912,"score_gpt":0.2619518073067644,"score_spread":0.24259482575419525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794825758","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.036176797,0.96273375,0.0000013750478,0.0001638948,0.00035162247,0.00021876815,0.00015554098,0.0000018959757,0.00019637485],"genre_scores_gemma":[0.011817028,0.9863895,0.000108093314,0.00011262489,0.00016717859,0.0000014476359,0.000013210972,0.000020594409,0.0013702872],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99813884,0.00028748938,0.0009190732,0.00020834219,0.000057357327,0.00038889475],"domain_scores_gemma":[0.99786806,0.00027566563,0.0006439245,0.00034763225,0.00043742286,0.00042730826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009273044,0.00021874146,0.0013272462,0.00014003109,0.00018649502,0.000014459429,0.00026045897,0.00024571051,0.000049074853],"category_scores_gemma":[0.0003393395,0.00013076939,0.00042095952,0.00017641191,0.0011236755,0.000030126092,0.000025721965,0.00044370792,0.000009942537],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001289645,0.00017714415,0.0054558776,0.027650919,0.003413935,0.0023830945,0.0012911302,1.1757801e-7,0.019335292,0.0010529214,0.31699213,0.6209578],"study_design_scores_gemma":[0.00025316354,0.00012539532,0.00011775537,0.0035227688,0.00055434555,0.00075773627,0.00006034416,3.585205e-8,0.00017581538,0.000033468266,0.994289,0.000110216715],"about_ca_topic_score_codex":0.0002464705,"about_ca_topic_score_gemma":0.04798352,"teacher_disagreement_score":0.6772968,"about_ca_system_score_codex":0.00018392816,"about_ca_system_score_gemma":0.0036457703,"threshold_uncertainty_score":0.9693883},"labels":[],"label_agreement":null},{"id":"W2796863313","doi":"10.1186/s40694-018-0046-5","title":"Cinnamomum zeylanicum bark essential oil induces cell wall remodelling and spindle defects in Candida albicans","year":2018,"lang":"en","type":"article","venue":"Fungal Biology and Biotechnology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Regina Qu'Appelle Health Region; University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Foundation for Innovation; Faculty of Graduate Studies and Research, University of Regina; University of Regina; Brown University","keywords":"Cinnamomum zeylanicum; Bark (sound); Cinnamomum; Candida albicans; Biology; Essential oil; Traditional medicine; Microbiology; Botany; Medicine; Pathology; Ecology","score_opus":0.01015192858999086,"score_gpt":0.2631568581000005,"score_spread":0.25300492951000964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796863313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939207,0.0021641569,0.00016107036,0.0018651767,0.00016806976,0.0001270503,0.000012698511,0.00008168096,0.0014993883],"genre_scores_gemma":[0.99714106,0.0014603297,0.00038924924,0.0004710948,0.0001379495,0.000006238253,0.000018835783,0.000012231192,0.0003630367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984882,0.00007193503,0.00028910168,0.0006130533,0.000060629845,0.0004771069],"domain_scores_gemma":[0.9994122,0.00006927568,0.00007592525,0.000287919,0.0000536715,0.00010105011],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002920525,0.00021077666,0.00043868273,0.00022063413,0.00014498965,0.000009210618,0.00010900629,0.0010331721,0.00006862596],"category_scores_gemma":[0.00010568568,0.00016821123,0.000043469827,0.0002441892,0.001089088,0.000044377044,0.00012044212,0.0005712475,0.000020206744],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006050756,0.00012751974,0.26249573,0.00011311675,0.000032091248,0.00006363898,0.00016861377,1.4278343e-7,0.72663176,0.0020528575,0.00011550063,0.007593976],"study_design_scores_gemma":[0.0059390706,0.0060107196,0.32493192,0.00034235566,0.00023148092,0.0004433559,0.0011117569,0.00112993,0.64025587,0.00489495,0.0136252325,0.0010833525],"about_ca_topic_score_codex":0.00050986675,"about_ca_topic_score_gemma":0.0022334408,"teacher_disagreement_score":0.08637587,"about_ca_system_score_codex":0.000034115415,"about_ca_system_score_gemma":0.000090425936,"threshold_uncertainty_score":0.79687697},"labels":[],"label_agreement":null},{"id":"W2797468464","doi":"10.1080/17425255.2018.1461834","title":"Common drug-drug interactions in antifungal treatments for superficial fungal infections","year":2018,"lang":"en","type":"review","venue":"Expert Opinion on Drug Metabolism & Toxicology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Mediprobe Research (Canada); Women's College Hospital; University of Toronto","funders":"","keywords":"Pharmacodynamics; Drug; Antifungal drug; Pharmacokinetics; Pharmacology; Antifungal drugs; Antifungal; Context (archaeology); Medicine; Drug interaction; Fluconazole; Itraconazole; Ketoconazole; Biology; Dermatology","score_opus":0.07607299476750871,"score_gpt":0.4238169281777413,"score_spread":0.3477439334102326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2797468464","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0055161547,0.9751204,0.0000366407,0.0006996641,0.011395519,0.00444861,0.00045476566,0.00018946144,0.0021387404],"genre_scores_gemma":[0.0039440263,0.9827487,0.00028975916,0.0006281557,0.0041092294,0.0019590089,0.0010657774,0.0001751829,0.005080157],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9942588,0.0010250362,0.0017623845,0.001506105,0.0004344443,0.0010132088],"domain_scores_gemma":[0.9964295,0.0012556469,0.00052716257,0.0011695864,0.00024431155,0.00037379365],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007800045,0.0010698158,0.004109404,0.0010982893,0.00045948022,0.00006100381,0.00041386927,0.00045186927,0.0006761516],"category_scores_gemma":[0.00048243933,0.0008848602,0.0015674148,0.0007644406,0.00038398607,0.00024285445,0.00015853185,0.001275796,0.00036527254],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020138575,0.012409673,0.0025990037,0.004419775,0.002095169,0.00010079159,0.0030876163,0.0000026158823,0.0001234317,0.0038133466,0.2153832,0.75395155],"study_design_scores_gemma":[0.0022298726,0.00029241873,0.0015556829,0.0033395144,0.0004504212,0.000084878004,0.0002672948,0.000018415518,0.00010614168,0.00007059215,0.99094254,0.0006422285],"about_ca_topic_score_codex":0.00034475588,"about_ca_topic_score_gemma":0.0019566817,"teacher_disagreement_score":0.77555937,"about_ca_system_score_codex":0.0007880896,"about_ca_system_score_gemma":0.0009485787,"threshold_uncertainty_score":0.9993602},"labels":[],"label_agreement":null},{"id":"W2799719197","doi":"10.3138/jammi.3.1.04","title":"Epidemiology of candidemia at a tertiary Canadian hospital, 2004–2013","year":2018,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Provincial Laboratory of Public Health; Alberta Health Services; University of Alberta","funders":"Centers for Disease Control and Prevention","keywords":"Medicine; Epidemiology; Odds ratio; Candida albicans; Corpus albicans; Internal medicine; Mortality rate; Central venous catheter; Logistic regression; Pediatrics; Antifungal; Surgery; Catheter; Biology; Microbiology","score_opus":0.005129986631194291,"score_gpt":0.24305931393143437,"score_spread":0.23792932730024008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2799719197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97140163,0.0018562933,0.000007144198,0.025726102,0.0007215911,0.00010073813,0.00007379477,0.0000016054527,0.00011110661],"genre_scores_gemma":[0.99477655,0.00025933495,0.0000065060012,0.0044872314,0.00017629343,7.411232e-7,0.0000060713073,0.000004407126,0.00028287162],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985835,0.0003034078,0.0005983958,0.00010298072,0.00018642875,0.00022529271],"domain_scores_gemma":[0.9976786,0.00046981912,0.0007691451,0.00013887719,0.0004460422,0.00049752544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001348059,0.00008614869,0.00044560977,0.00006014066,0.0001056165,6.50353e-7,0.00012949386,0.00022393385,0.0002809478],"category_scores_gemma":[0.0074285488,0.000055195986,0.0001362863,0.000093069364,0.00034376234,0.000026212541,0.000039814444,0.0002859448,8.387038e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000091832975,0.00003784542,0.8845605,0.000040888546,0.0001669581,0.0000104582405,0.000029044257,6.7686335e-7,0.00037975758,0.00004132877,0.11452908,0.000111598325],"study_design_scores_gemma":[0.0007749161,0.0002136994,0.98589003,0.00014400292,0.00015622484,0.00005394173,0.000025007868,0.00001003721,0.0002327963,0.0001624185,0.012284979,0.00005192543],"about_ca_topic_score_codex":0.53815836,"about_ca_topic_score_gemma":0.95222914,"teacher_disagreement_score":0.4140708,"about_ca_system_score_codex":0.0009854957,"about_ca_system_score_gemma":0.0047511356,"threshold_uncertainty_score":0.8893204},"labels":[],"label_agreement":null},{"id":"W2799888899","doi":"10.1111/tid.12913","title":"Fungal infections in hematopoietic stem cell transplantation in children at a pediatric children’s hospital in Argentina","year":2018,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Medicine; Hematopoietic stem cell transplantation; Incidence (geometry); Retrospective cohort study; Aspergillosis; Cumulative incidence; Complication; Pediatrics; Transplantation; Hematopoietic stem cell; Internal medicine; Stem cell; Haematopoiesis; Immunology","score_opus":0.005193628076186995,"score_gpt":0.22339106802996223,"score_spread":0.21819743995377522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2799888899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99687713,0.00046277992,0.0000953288,0.000060134615,0.00014724367,0.0013909492,0.0002249584,0.00011410764,0.0006273435],"genre_scores_gemma":[0.99807763,0.0011986498,0.0000057082257,0.00007642808,0.00015910955,0.00011099922,0.00024631733,0.000036508052,0.00008862331],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99774194,0.000130126,0.0006146904,0.00062191626,0.0003177141,0.00057360285],"domain_scores_gemma":[0.99916995,0.000062648745,0.00008732563,0.00032076112,0.00004703531,0.0003123107],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00024993674,0.00032158912,0.00042257056,0.0005995872,0.000113574024,0.00002040415,0.00009391717,0.00015953463,0.00018463754],"category_scores_gemma":[0.000012415818,0.000322718,0.00018800996,0.0008484422,0.000105892155,0.0001888122,0.00001271823,0.00039423033,0.00014441683],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007758754,0.002499414,0.9942785,0.0003981968,0.000017305716,0.0002638776,0.0014345818,0.000041002873,0.00014582246,0.000031376367,0.000024663348,0.00008937169],"study_design_scores_gemma":[0.0048430907,0.00041389914,0.99339086,0.00018172833,0.00022766681,0.00013871759,0.000027725266,0.000050934403,0.00033086288,0.0000601799,0.0000024047226,0.0003319299],"about_ca_topic_score_codex":0.00057520194,"about_ca_topic_score_gemma":0.005064452,"teacher_disagreement_score":0.00448925,"about_ca_system_score_codex":0.0003247111,"about_ca_system_score_gemma":0.00020434937,"threshold_uncertainty_score":0.9999225},"labels":[],"label_agreement":null},{"id":"W2801644402","doi":"10.3138/jammi.3.1.09","title":"Recurrent echinocandin-resistant <i>Candida glabrata</i> candidemia following prolonged micafungin treatment of multiple intra-abdominal abscesses","year":2018,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University; Provincial Laboratory of Public Health; University of Alberta","funders":"","keywords":"Micafungin; Echinocandin; Candida glabrata; Medicine; Salvage therapy; Internal medicine; Microbiology; Gastroenterology; Intensive care medicine; Antifungal; Biology; Dermatology; Chemotherapy; Voriconazole","score_opus":0.005874688357018066,"score_gpt":0.24740724823291088,"score_spread":0.2415325598758928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2801644402","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99423164,0.0017097864,0.00001972058,0.0028941245,0.00079758663,0.0001949998,0.00010345231,0.0000032435269,0.000045426565],"genre_scores_gemma":[0.99892646,0.00034801528,0.000017424527,0.00041474839,0.00019464726,0.0000023293414,0.0000095150845,0.000006150783,0.000080728525],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984499,0.00022897021,0.00063137343,0.00013541013,0.00035594933,0.00019837361],"domain_scores_gemma":[0.9980949,0.00040005925,0.00079132273,0.00014353363,0.00030432345,0.00026586454],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068563886,0.00013109644,0.00053899345,0.000054656895,0.000121172765,0.000005150795,0.00011844562,0.00014795532,0.00005435588],"category_scores_gemma":[0.0026559834,0.00007934868,0.00022120403,0.00013648519,0.00018913309,0.000038009315,0.000026329275,0.00018607678,1.9527643e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018469284,0.0002989136,0.9689064,0.00010575977,0.0005626723,0.000030532996,0.00013378565,7.6163946e-7,0.01942758,0.00001800388,0.0073264265,0.0013422427],"study_design_scores_gemma":[0.009486694,0.0028873275,0.94626945,0.0009572331,0.0015246583,0.00009388197,0.00025944557,0.00007033965,0.0208711,0.00014018016,0.017210823,0.0002288961],"about_ca_topic_score_codex":0.015733428,"about_ca_topic_score_gemma":0.291836,"teacher_disagreement_score":0.27610257,"about_ca_system_score_codex":0.00079439254,"about_ca_system_score_gemma":0.0029105826,"threshold_uncertainty_score":0.9908209},"labels":[],"label_agreement":null},{"id":"W2803225311","doi":"10.1016/j.celrep.2018.04.084","title":"Functional Genomic Screening Reveals Core Modulators of Echinocandin Stress Responses in Candida albicans","year":2018,"lang":"en","type":"article","venue":"Cell Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Genome Canada","keywords":"Echinocandins; Echinocandin; Candida albicans; Biology; Corpus albicans; Mutant; Cell biology; Gene; Microbiology; Genetics","score_opus":0.03564670043168457,"score_gpt":0.28669765196176566,"score_spread":0.2510509515300811,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803225311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931465,0.00024463606,0.0003168854,0.0000350858,0.00018235398,0.0002543979,0.000012370829,0.000021466542,0.0057863193],"genre_scores_gemma":[0.9929451,0.00001682603,0.000437869,0.00007196625,0.00013909153,0.000004982403,0.000032361393,0.000017339547,0.006334494],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984811,0.00004090711,0.0005735491,0.00036543448,0.00030166944,0.0002373366],"domain_scores_gemma":[0.99892026,0.000082575934,0.0002502493,0.00048159686,0.00014099665,0.00012430927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055769546,0.00013017176,0.00034381112,0.00014331227,0.00006727204,0.000005941227,0.00004279068,0.000097940094,0.0005118839],"category_scores_gemma":[0.00028304747,0.00011490732,0.00009378529,0.00019948979,0.00022178047,0.00004672928,0.000034688208,0.00015393697,0.000005442664],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006970081,0.000083338775,0.9067948,0.00007069073,0.000015343063,0.00038629206,0.00017248145,0.000015341226,0.09052507,0.000015501502,0.0008573871,0.00036678306],"study_design_scores_gemma":[0.0003841987,0.0001724911,0.9700071,0.00017766205,0.00003120901,0.00007363152,0.0001927814,0.000064636915,0.028215425,0.00022949094,0.00034939466,0.00010196471],"about_ca_topic_score_codex":0.00057535345,"about_ca_topic_score_gemma":0.0007874567,"teacher_disagreement_score":0.06321235,"about_ca_system_score_codex":0.000106146435,"about_ca_system_score_gemma":0.0002787681,"threshold_uncertainty_score":0.56047696},"labels":[],"label_agreement":null},{"id":"W2803962224","doi":"10.1186/s13054-018-2023-z","title":"Fungal infections in adult patients on extracorporeal life support","year":2018,"lang":"en","type":"article","venue":"Critical Care","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital du Sacré-Cœur de Montréal","funders":"Extracorporeal Life Support Organization","keywords":"Medicine; Extracorporeal membrane oxygenation; Intensive care unit; Retrospective cohort study; Sepsis; Internal medicine; Extracorporeal; Aspergillosis; Intensive care medicine; Immunology","score_opus":0.022565235913082064,"score_gpt":0.3372965146108748,"score_spread":0.3147312786977927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803962224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9489044,0.000017883436,0.000040658702,0.00049315736,0.00027497715,0.00017459024,0.00004442192,0.000044406603,0.050005525],"genre_scores_gemma":[0.9975301,0.0000028268119,0.00006616255,0.0018487319,0.00030544802,0.000013703718,0.0000558109,0.000012796317,0.00016443193],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99892855,0.000034541936,0.00022257335,0.00027293008,0.00026505682,0.00027635356],"domain_scores_gemma":[0.9987227,0.0001135502,0.0000121417115,0.000245571,0.000641321,0.00026473324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000660421,0.00010606161,0.00018354188,0.00006604955,0.00008282775,0.000012500173,0.00004346104,0.00011521026,0.00067167013],"category_scores_gemma":[0.0026819105,0.00009183527,0.000076494434,0.00014162547,0.00028336386,0.00006116213,0.000020546917,0.00024953485,0.00031454145],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025645507,0.00044018496,0.9904163,0.00013334697,0.0000034258157,0.00004571726,0.00032459054,4.7430074e-8,0.000048269565,0.003661196,0.0023263204,0.0023441664],"study_design_scores_gemma":[0.00093777006,0.0020731776,0.99456936,0.000087852146,0.000029013352,0.0000036235663,0.00074056094,0.0000095601345,0.00032389205,0.00017996308,0.00093893835,0.000106273736],"about_ca_topic_score_codex":0.000043078697,"about_ca_topic_score_gemma":0.00043885477,"teacher_disagreement_score":0.049841095,"about_ca_system_score_codex":0.00010551167,"about_ca_system_score_gemma":0.00014491341,"threshold_uncertainty_score":0.7354317},"labels":[],"label_agreement":null},{"id":"W2804055252","doi":"10.1139/cjm-2018-0048","title":"The putative transient receptor potential channel protein encoded by the orf19.4805 gene is involved in cation sensitivity, antifungal tolerance, and filamentation in <i>Candida albicans</i>","year":2018,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China","keywords":"Candida albicans; Filamentation; Biology; Corpus albicans; Transient receptor potential channel; Amino acid; Ion channel; Gene; Saccharomyces cerevisiae; Cell biology; Biochemistry; Genetics; Receptor","score_opus":0.00875339718917975,"score_gpt":0.23312866246980743,"score_spread":0.22437526528062768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804055252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99189615,0.0008697859,0.00023004388,0.0061721588,0.00020223054,0.00046482045,0.00012567903,0.000001508206,0.000037633647],"genre_scores_gemma":[0.9984545,0.00008895529,0.00007948235,0.0010511363,0.00011248548,0.000006256175,0.000036860518,0.000008642018,0.00016169729],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986962,0.00033593999,0.00040583703,0.00018498913,0.00006569843,0.0003113171],"domain_scores_gemma":[0.99925935,0.00007536161,0.0001765937,0.000114855764,0.00022521528,0.00014863434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008845094,0.00012103699,0.00025947194,0.00011932822,0.00017575946,0.000024654524,0.000080793434,0.00010951313,0.000044902376],"category_scores_gemma":[0.00009738958,0.0000784199,0.000051756575,0.00020047331,0.00058385846,0.00007397698,0.0000058209707,0.00030618013,0.000002883919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051096093,0.000029980734,0.012443272,0.000013722095,0.000031974054,0.00005968485,0.003668742,0.000005113738,0.97747505,0.0000072420507,0.0043546017,0.0013996855],"study_design_scores_gemma":[0.008113672,0.0021499153,0.21624242,0.0006084404,0.0001185405,0.0010799373,0.0116145415,0.0006409447,0.74367136,0.000325039,0.014913485,0.0005217029],"about_ca_topic_score_codex":0.0054474985,"about_ca_topic_score_gemma":0.1880632,"teacher_disagreement_score":0.23380364,"about_ca_system_score_codex":0.0002342205,"about_ca_system_score_gemma":0.000745449,"threshold_uncertainty_score":0.82675254},"labels":[],"label_agreement":null},{"id":"W2804198042","doi":"10.1111/nyas.13739","title":"New pathogens, new tricks: emerging, drug‐resistant fungal pathogens and future prospects for antifungal therapeutics","year":2018,"lang":"en","type":"review","venue":"Annals of the New York Academy of Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":166,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Antifungal; Antifungal drugs; Antifungal drug; Drug resistance; Drug; Microbiology; Biology; Medicine; Pharmacology","score_opus":0.12337399015094709,"score_gpt":0.3917556092540036,"score_spread":0.2683816191030565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804198042","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00090166746,0.9890103,0.000057966186,0.0070147305,0.00040032755,0.0020440076,0.00019466007,0.000033853965,0.0003425084],"genre_scores_gemma":[0.00065753545,0.98650706,0.0030395654,0.0007892034,0.0026787226,0.000010595338,0.0000068868662,0.000051983683,0.0062584598],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99532455,0.00019207441,0.0013971356,0.0010687752,0.0012273855,0.000790076],"domain_scores_gemma":[0.9969596,0.00037900978,0.0015257188,0.0004746616,0.0001719024,0.0004890763],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0020934073,0.00067269325,0.002375791,0.0002739552,0.00041734177,0.00006341883,0.001248203,0.00061584375,0.00006175949],"category_scores_gemma":[0.0002677638,0.00038990396,0.0012908321,0.0014890287,0.0010775256,0.00016823766,0.0002172977,0.00063333276,0.000005153446],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028751473,0.00009169921,0.00091126317,0.0074201077,0.0003664682,0.0000015630895,0.00057909754,1.4530288e-7,0.00039971955,0.001514841,0.14469242,0.84373516],"study_design_scores_gemma":[0.00049797713,0.00054015365,0.0015115786,0.007413036,0.0013753702,0.00002349155,0.00029166014,0.0000045824854,0.0011669648,0.0027826885,0.9839816,0.00041088057],"about_ca_topic_score_codex":0.000057061592,"about_ca_topic_score_gemma":0.000018735667,"teacher_disagreement_score":0.84332424,"about_ca_system_score_codex":0.00003320633,"about_ca_system_score_gemma":0.0023547723,"threshold_uncertainty_score":0.9998553},"labels":[],"label_agreement":null},{"id":"W2804210381","doi":"10.1097/mot.0000000000000543","title":"Early diagnosis of fungal infections in lung transplant recipients, colonization versus invasive disease?","year":2018,"lang":"en","type":"review","venue":"Current Opinion in Organ Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"","keywords":"Intensive care medicine; Medicine; Fungal disease; Disease; Antifungal; Colonization; Aspergillosis; Lung transplantation; Antifungal drugs; Lung; Disease control; Pathology; Immunology; Internal medicine; Biology; Dermatology","score_opus":0.08130270215791867,"score_gpt":0.3855801267884494,"score_spread":0.3042774246305307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804210381","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.047619022,0.9445538,0.00033976394,0.00002220701,0.004251728,0.0021851277,0.00094661943,0.000043117885,0.000038621765],"genre_scores_gemma":[0.08175163,0.9133382,0.000017311791,0.0000019214465,0.00023189184,0.00026513662,0.0043440466,0.00004271662,0.0000071675718],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972277,0.00029401062,0.0011552107,0.00058764004,0.0004064837,0.0003289036],"domain_scores_gemma":[0.99849355,0.00051871524,0.00035737475,0.00031427154,0.00015838032,0.00015771625],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030364658,0.00038200265,0.0010733668,0.0007406211,0.0000662975,0.000017895261,0.00013984522,0.0002858157,0.000102435166],"category_scores_gemma":[0.0001920036,0.0003639904,0.0003016855,0.0012339184,0.00012949189,0.00019793324,0.00001111898,0.00048511612,0.000026487525],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012496967,0.0010067752,0.86217064,0.10032425,0.000093451614,0.00001604305,0.0011841258,0.000004040463,9.85165e-7,0.00012578351,0.00018599047,0.033638243],"study_design_scores_gemma":[0.005935124,0.00074971037,0.7561522,0.20887713,0.002234226,0.000018194523,0.00004693995,0.000024784114,0.000021942007,0.000026332804,0.025171766,0.00074162404],"about_ca_topic_score_codex":0.000047880447,"about_ca_topic_score_gemma":0.00027368465,"teacher_disagreement_score":0.10855288,"about_ca_system_score_codex":0.0004323178,"about_ca_system_score_gemma":0.00074912654,"threshold_uncertainty_score":0.9998812},"labels":[],"label_agreement":null},{"id":"W2804564262","doi":"10.1155/2018/3086586","title":"In Vitro Antifungal Susceptibility of<i>Candida</i>Species Isolated from Iranian Patients with Denture Stomatitis","year":2018,"lang":"en","type":"article","venue":"BioMed Research International","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Babol University of Medical Sciences; International Development Research Centre","keywords":"Posaconazole; Itraconazole; Fluconazole; Voriconazole; Microbiology; Amphotericin B; Stomatitis; Caspofungin; Candida tropicalis; Candida parapsilosis; Candida albicans; Minimum inhibitory concentration; Biology; Candida glabrata; Medicine; Antifungal; Antibiotics; Gastroenterology","score_opus":0.026718011224013637,"score_gpt":0.3349717370581594,"score_spread":0.3082537258341458,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804564262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99499506,0.000044790035,0.00011461129,0.0007914309,0.00044970433,0.0004692442,0.0005347308,0.00002322148,0.0025772383],"genre_scores_gemma":[0.99739105,0.000029265579,0.000725587,0.000085375854,0.00038173248,0.000011803663,0.0003801752,0.000017314334,0.0009777115],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970705,0.00012721895,0.00040613385,0.00046558326,0.0015344467,0.00039611763],"domain_scores_gemma":[0.9976109,0.0001891941,0.000088873974,0.00040520637,0.0015435568,0.00016226016],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00066283793,0.00014713859,0.00030450514,0.00045724996,0.00009080745,0.000038675258,0.00030389163,0.00013248298,0.0022191065],"category_scores_gemma":[0.00050300296,0.000111190435,0.000075903896,0.0006615427,0.00097060594,0.00021490038,0.000114678376,0.00038214776,0.00007681528],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005445191,0.00068909576,0.8092255,0.000038222184,0.00010570212,0.00003347288,0.0003581781,5.371171e-8,0.17972519,0.00007916965,0.003523738,0.0007765063],"study_design_scores_gemma":[0.0026266964,0.000612958,0.9583957,0.00015385287,0.000009194549,0.0000014793349,0.00021336802,0.000154074,0.034554835,0.00020764815,0.00296504,0.000105122635],"about_ca_topic_score_codex":0.0009830765,"about_ca_topic_score_gemma":0.0017198842,"teacher_disagreement_score":0.14917025,"about_ca_system_score_codex":0.00033259238,"about_ca_system_score_gemma":0.00022936129,"threshold_uncertainty_score":0.998693},"labels":[],"label_agreement":null},{"id":"W2805098648","doi":"10.1016/j.jaci.2018.05.025","title":"GM-CSF therapy in human caspase recruitment domain–containing protein 9 deficiency","year":2018,"lang":"en","type":"letter","venue":"Journal of Allergy and Clinical Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Biology; Chemotaxis; Immunology; Neutropenia; Central nervous system; Receptor; Genetics; Endocrinology; Chemotherapy","score_opus":0.09624843431012411,"score_gpt":0.38864633259691206,"score_spread":0.29239789828678797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805098648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88291615,0.005770728,0.000024037496,0.10905923,0.00049955596,0.000515087,0.0000023785622,0.000008302635,0.0012045208],"genre_scores_gemma":[0.6742307,0.023405088,0.0014602294,0.28845796,0.007977032,0.00005784849,0.000077580895,0.00011597992,0.004217583],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961351,0.0006457089,0.0019924473,0.00042978878,0.00032252102,0.00047442535],"domain_scores_gemma":[0.99769545,0.00035827747,0.0010429716,0.00044131133,0.00035957596,0.00010240311],"candidate_categories":["research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0019032351,0.0003161529,0.0013817832,0.0002325975,0.00011799554,0.000024053026,0.00027621558,0.0014684534,0.0005230011],"category_scores_gemma":[0.00044355865,0.00022677495,0.00046566498,0.00011766984,0.00081237685,0.000089392895,0.00008119439,0.003992986,0.000010687587],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.055044655,0.009664551,0.107982874,0.0006536323,0.01754431,0.060266893,0.0035151765,9.879731e-7,0.024074627,0.0016812406,0.59829277,0.1212783],"study_design_scores_gemma":[0.01157935,0.03443457,0.16356514,0.0016092744,0.00015779225,0.00082975987,0.00067379005,0.0000015272889,0.00018757451,0.004744513,0.7816769,0.0005398067],"about_ca_topic_score_codex":0.000054075488,"about_ca_topic_score_gemma":0.00020221272,"teacher_disagreement_score":0.20868547,"about_ca_system_score_codex":0.0001374392,"about_ca_system_score_gemma":0.0004156384,"threshold_uncertainty_score":0.99982786},"labels":[],"label_agreement":null},{"id":"W2805978076","doi":"10.1111/myc.12797","title":"Use of (1→3)‐β‐<scp>d</scp>‐glucan for diagnosis and management of invasive mycoses in <scp>HIV</scp>‐infected patients","year":2018,"lang":"en","type":"review","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; Canadian HIV Trials Network, Canadian Institutes of Health Research; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Canadian Institutes of Health Research; Canadian Foundation for AIDS Research","keywords":"Immunology; Human immunodeficiency virus (HIV); Immune system; Biology; Antifungal; Medicine; Microbiology","score_opus":0.07894515204717657,"score_gpt":0.330417234370825,"score_spread":0.2514720823236484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805978076","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3010559,0.6926136,0.000012713003,0.000004682484,0.00016494765,0.004612283,0.00088697294,0.000035816385,0.00061308505],"genre_scores_gemma":[0.010267766,0.9862688,0.0008225531,0.000049478294,0.000083470964,0.0006627167,0.00062559964,0.00009074294,0.0011288519],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99649346,0.00019443412,0.0014013704,0.0008364751,0.0005148107,0.00055942935],"domain_scores_gemma":[0.9923987,0.0051135677,0.00095411186,0.0008151833,0.0005183597,0.00020012434],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038657463,0.00063232565,0.002842064,0.00048241642,0.00006796618,0.000032504937,0.0002583394,0.000411128,0.00001541957],"category_scores_gemma":[0.0061206724,0.0005088488,0.00057189993,0.0006538162,0.00034866337,0.00018070031,0.00024108416,0.00026072556,0.000015796319],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006408809,0.0025934414,0.53629845,0.24465607,0.0017128448,0.00005027597,0.0006577149,3.6312665e-7,0.00001063696,0.00020038638,0.042373706,0.17138202],"study_design_scores_gemma":[0.0015014842,0.0012051389,0.13688783,0.051031813,0.0029834053,0.0000031804143,0.00035143463,0.0000015920723,0.00046352006,0.00006473566,0.8053641,0.00014181079],"about_ca_topic_score_codex":0.00008729623,"about_ca_topic_score_gemma":0.0003496271,"teacher_disagreement_score":0.76299036,"about_ca_system_score_codex":0.00017689304,"about_ca_system_score_gemma":0.0002936654,"threshold_uncertainty_score":0.9997363},"labels":[],"label_agreement":null},{"id":"W2805981706","doi":"10.14740/gr1019w","title":"Possible Risk Factors for Candida Esophagitis in Immunocompetent Individuals","year":2018,"lang":"en","type":"article","venue":"Gastroenterology Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Esophagitis; Dermatology; Internal medicine; Disease","score_opus":0.06273131313763253,"score_gpt":0.39182174038268475,"score_spread":0.3290904272450522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805981706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974856,0.0001343877,0.00021674453,0.0005362257,0.00012589683,0.0009271369,0.00009981935,0.000024978692,0.0004492255],"genre_scores_gemma":[0.9981599,0.000068017915,0.00059991964,0.00014698094,0.00016478545,0.000105006395,0.00004875171,0.00002061366,0.0006860669],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99735224,0.00036847653,0.00035209177,0.00047637345,0.00040505183,0.0010457899],"domain_scores_gemma":[0.9985948,0.00031708225,0.000058671845,0.0004529782,0.00039067224,0.00018576763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019682853,0.0001455217,0.0003911605,0.00038797723,0.00024009391,0.000025632895,0.0002237242,0.00013570336,0.00030111097],"category_scores_gemma":[0.0007510564,0.00011952908,0.00012142395,0.0002619575,0.000769423,0.00007116354,0.00013334252,0.00060692313,0.00006376024],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001740267,0.00021629015,0.9939579,0.000036873353,0.00006546869,0.000016951362,0.0005042287,3.784417e-7,0.0013456256,0.000039131224,0.0016231572,0.00045377927],"study_design_scores_gemma":[0.0024589354,0.0030779385,0.9914768,0.000045828085,0.000017128059,0.0000136717235,0.0006203127,0.000053622105,0.0013702232,0.00043647413,0.00037932926,0.000049755763],"about_ca_topic_score_codex":0.00078129175,"about_ca_topic_score_gemma":0.0024034446,"teacher_disagreement_score":0.002861648,"about_ca_system_score_codex":0.00017786794,"about_ca_system_score_gemma":0.00016246045,"threshold_uncertainty_score":0.48742545},"labels":[],"label_agreement":null},{"id":"W2806646997","doi":"10.1101/340315","title":"<i>Candida albicans</i> hyphal expansion causes phagosomal membrane damage and luminal alkalinization","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"","keywords":"Hypha; Phagosome; Candida albicans; Microbiology; Biology; Yeast; Vacuole; Corpus albicans; Cell biology; Biochemistry; Phagocytosis","score_opus":0.014291102722782958,"score_gpt":0.24526950516183146,"score_spread":0.2309784024390485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806646997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99552083,0.0011387159,0.0005765571,0.00035678726,0.00094066333,0.0008948445,0.00020501338,0.00032207486,0.000044512068],"genre_scores_gemma":[0.99490917,0.0007712728,0.0020057664,0.00065114157,0.0014106403,0.00006590334,0.0000036492904,0.00013393436,0.000048525482],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9965448,0.00015585727,0.0006777607,0.0013593526,0.0006583938,0.0006038303],"domain_scores_gemma":[0.9968944,0.00008708195,0.00036477786,0.0013566919,0.00078383606,0.00051318563],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006254991,0.00064293604,0.00091793004,0.00023467021,0.00025456,0.00014999144,0.00025875962,0.00068432395,0.00022383693],"category_scores_gemma":[0.00042882242,0.00063111586,0.000170452,0.0003974436,0.00052911765,0.00021750903,0.00037099593,0.0007612473,0.00005273869],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006084625,0.0003295143,0.12806219,0.001529053,0.00020200173,0.00026385556,0.00003613042,0.0000026420753,0.86777,0.00010169882,0.0010892194,0.0000052199075],"study_design_scores_gemma":[0.0016239381,0.0003032133,0.61740315,0.0011824962,0.00057483255,2.1557915e-7,0.000017115135,0.00027686055,0.3738266,0.0000027542171,0.003978185,0.0008106477],"about_ca_topic_score_codex":0.00011654033,"about_ca_topic_score_gemma":0.000025563259,"teacher_disagreement_score":0.49394342,"about_ca_system_score_codex":0.00021824447,"about_ca_system_score_gemma":0.00092305837,"threshold_uncertainty_score":0.999614},"labels":[],"label_agreement":null},{"id":"W2807226506","doi":"10.1111/tid.12941","title":"A vexing case of bone pain in a renal transplant recipient: Voriconazole‐induced periostitis","year":2018,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Positive Living Society of British Columbia; Providence Health Care; Vancouver Infectious Diseases Centre; St. Paul's Hospital; BC Centre for Disease Control; University of British Columbia","funders":"","keywords":"Voriconazole; Periostitis; Medicine; Discontinuation; Aspergillosis; Microtrauma; Immunosuppression; Bone pain; Surgery; Internal medicine; Dermatology; Immunology; Antifungal","score_opus":0.015167073237561982,"score_gpt":0.26725606389498774,"score_spread":0.25208899065742574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807226506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959053,0.00030748855,0.0010075999,0.000108574815,0.0001393624,0.00054605736,0.00027888143,0.00009056274,0.0016161745],"genre_scores_gemma":[0.99923146,0.00017787391,0.00004493629,0.00019655189,0.00015406219,0.00003771451,0.000070897906,0.000027492955,0.00005903527],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981144,0.00016517787,0.0005754954,0.00044553156,0.00026958148,0.00042979707],"domain_scores_gemma":[0.99886423,0.00013093851,0.00009032479,0.00038013185,0.00011939082,0.0004149601],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067060476,0.00025037452,0.00049952563,0.00024158478,0.00012490811,0.000012592591,0.000058098478,0.000114028444,0.0002963323],"category_scores_gemma":[0.00013220156,0.00022949977,0.00022950531,0.00039491977,0.00018270586,0.0001026794,0.000006963762,0.00025899438,0.000022798227],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00604635,0.0016585379,0.8795626,0.0014630659,0.00011087569,0.036308303,0.0034583143,0.000009369094,0.061754055,0.00039145036,0.00004171873,0.009195354],"study_design_scores_gemma":[0.0073442725,0.0024922525,0.96880287,0.0040894686,0.0007818249,0.00465064,0.00022705396,0.002245489,0.007868348,0.00036574833,0.00035257117,0.0007794442],"about_ca_topic_score_codex":0.0010155076,"about_ca_topic_score_gemma":0.003348869,"teacher_disagreement_score":0.08924028,"about_ca_system_score_codex":0.00010936766,"about_ca_system_score_gemma":0.00025573577,"threshold_uncertainty_score":0.93587285},"labels":[],"label_agreement":null},{"id":"W2807244885","doi":"10.1128/aac.02576-17","title":"Iron Restriction to Clinical Isolates of Candida albicans by the Novel Chelator DIBI Inhibits Growth and Increases Sensitivity to Azoles<i>In Vitro</i>and<i>In Vivo</i>in a Murine Model of Experimental Vaginitis","year":2018,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen Elizabeth II Health Sciences Centre; Nova Scotia Health Authority; Dalhousie University","funders":"National Institute of General Medical Sciences; Government of Canada","keywords":"In vivo; Candida albicans; In vitro; Microbiology; Biology; Pharmacology; Chemistry; Biochemistry; Genetics","score_opus":0.017840807802751043,"score_gpt":0.2925158843445998,"score_spread":0.27467507654184875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807244885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99797755,0.000051809373,0.00008424608,0.0012378949,0.000024005718,0.00045376507,0.00011103539,0.0000056081158,0.00005405465],"genre_scores_gemma":[0.9958884,0.0007016652,0.00035227314,0.0029524334,0.000041642823,0.000004768389,0.0000059941412,0.000015482166,0.000037349175],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988532,0.000043238906,0.00043414,0.0003555033,0.00010526808,0.00020866477],"domain_scores_gemma":[0.9995492,0.000074954005,0.00007906786,0.00014667386,0.000039817005,0.00011027048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003052574,0.0001607128,0.0004331423,0.00009019504,0.00003799041,0.00000992819,0.000040548013,0.00009182858,0.000009423138],"category_scores_gemma":[0.000043951168,0.00012632298,0.000042907523,0.00019105061,0.00022953242,0.00006434947,0.000054914217,0.00012300821,2.7806072e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002162414,0.0006204826,0.22435594,0.000042186533,0.000012218562,0.0000024756905,0.00079739926,0.0000011634071,0.7712672,0.0000058577493,0.00037649117,0.00035618816],"study_design_scores_gemma":[0.0033531308,0.00037239896,0.30797213,0.00021663174,0.0000141977225,0.0000084166495,0.00019056811,0.0007184886,0.68695664,0.000006166808,0.000057662317,0.00013354064],"about_ca_topic_score_codex":0.004281952,"about_ca_topic_score_gemma":0.0010995525,"teacher_disagreement_score":0.08431054,"about_ca_system_score_codex":0.000028402681,"about_ca_system_score_gemma":0.000040989697,"threshold_uncertainty_score":0.64730597},"labels":[],"label_agreement":null},{"id":"W2807915724","doi":"10.1017/s026646231800034x","title":"COMPARATIVE EFFECTIVENESS AND SAFETY BETWEEN AMPHOTERICIN B LIPID-FORMULATIONS: A SYSTEMATIC REVIEW","year":2018,"lang":"en","type":"review","venue":"International Journal of Technology Assessment in Health Care","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Association of Occupational Therapists","funders":"","keywords":"Amphotericin B; Medicine; Pharmacology; Intensive care medicine; Chemistry; Antifungal; Dermatology","score_opus":0.0504052658544434,"score_gpt":0.478909369257956,"score_spread":0.42850410340351264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807915724","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00027667414,0.9952169,0.00046365208,0.00092084677,0.00031462059,0.002649314,0.000070985094,0.000021196816,0.00006582917],"genre_scores_gemma":[0.013910357,0.9844068,0.0011686062,0.00017950826,0.0001469579,0.00007230197,0.000088293134,0.000019155017,0.000007999263],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9957809,0.000587149,0.002550009,0.00030280728,0.00056384975,0.00021531674],"domain_scores_gemma":[0.99544597,0.00065746414,0.0023849735,0.00031724697,0.0010888107,0.00010553482],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019302574,0.00031182577,0.0044490956,0.00094362657,0.00006707016,0.00001833137,0.00041684203,0.0003323769,0.000015881695],"category_scores_gemma":[0.00054726866,0.00022237856,0.0003642086,0.00044719188,0.00016060704,0.00011069288,0.00012096699,0.0010839923,0.0000052747864],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054766497,0.0000779327,0.0035939484,0.9436918,0.0007669356,0.00006619985,0.00008547005,1.3354448e-7,1.2764988e-7,0.00032113362,0.0000761835,0.051265392],"study_design_scores_gemma":[0.0006475495,0.0006491968,0.004134136,0.9537453,0.00092793326,0.00046158434,0.00036066893,0.000001478547,6.089938e-7,0.00008854071,0.03882688,0.00015613284],"about_ca_topic_score_codex":0.0000117151585,"about_ca_topic_score_gemma":0.000016199325,"teacher_disagreement_score":0.051109258,"about_ca_system_score_codex":0.0023334636,"about_ca_system_score_gemma":0.0016845156,"threshold_uncertainty_score":0.9068334},"labels":[],"label_agreement":null},{"id":"W2809506570","doi":"10.15698/mic2018.07.638","title":"Methodologies for in vitro and in vivo evaluation of efficacy of antifungal and antibiofilm agents and surface coatings against fungal biofilms","year":2018,"lang":"en","type":"review","venue":"Microbial Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; Canada Research Chairs; University of Toronto","funders":"National Institute of General Medical Sciences; National Institute of Allergy and Infectious Diseases; Medical Research Council; National Institutes of Health; Israel Science Foundation; Deutsche Forschungsgemeinschaft; National Institute of Dental and Craniofacial Research; University of Aberdeen; Fonds Wetenschappelijk Onderzoek; Medical Research Council Centre for Medical Mycology; Amplyx; Wellcome Trust; Agence Nationale de la Recherche; Cidara Therapeutics; Astellas Pharma; Gilead Sciences; Pfizer","keywords":"Biofilm; Antifungal; Microbiology; Antifungal drugs; In vivo; Drug resistance; Echinocandins; Biology; Medicine; Fluconazole; Bacteria; Biotechnology; Caspofungin","score_opus":0.13181440634534952,"score_gpt":0.3983011493737132,"score_spread":0.26648674302836367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809506570","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5635137,0.4347654,0.000008274591,0.000005247436,0.000052591757,0.0013875056,0.00019853949,0.000004945032,0.00006381017],"genre_scores_gemma":[0.18074183,0.8143423,0.004602706,0.000018159764,0.000038353148,0.0000071267405,0.000110640474,0.000034712073,0.00010415829],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974238,0.0005254723,0.00093538186,0.0006102673,0.00021864194,0.00028639115],"domain_scores_gemma":[0.9981694,0.00077592995,0.0005083146,0.00027211214,0.00021049217,0.000063738386],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.003489198,0.00033841995,0.001956656,0.00022702735,0.000035395784,0.000014562614,0.00009184407,0.00039866622,0.000012694981],"category_scores_gemma":[0.0008556483,0.00028525005,0.0001649104,0.0002582594,0.0004058705,0.000059057802,0.00011147984,0.00024071505,5.100543e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013526,0.00030476565,0.0064173364,0.055230662,0.00007314623,0.0000073474316,0.0004651453,0.000001096777,0.8354014,0.000001325534,0.00059962453,0.10014556],"study_design_scores_gemma":[0.0215491,0.0017005389,0.028233051,0.042318508,0.00500179,0.000057980313,0.0009447495,0.00040997975,0.8586391,0.000039010672,0.039385293,0.0017208568],"about_ca_topic_score_codex":0.00006933949,"about_ca_topic_score_gemma":0.00006804338,"teacher_disagreement_score":0.38277185,"about_ca_system_score_codex":0.0000745976,"about_ca_system_score_gemma":0.00027847014,"threshold_uncertainty_score":0.99995995},"labels":[],"label_agreement":null},{"id":"W2809738299","doi":"10.1101/361139","title":"A phenotypic small-molecule screen identifies halogenated salicylanilides as inhibitors of fungal morphogenesis, biofilm formation and host cell invasion","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Université Laval; Audrey and Theodor Geisel School of Medicine at Dartmouth; Dartmouth College; Centre Hospitalier Universitaire de Québec; Fondation CHU de Québec","keywords":"Niclosamide; Candida albicans; Biology; Biofilm; Corpus albicans; Yeast; Microbiology; Pathogenic fungus; Biochemistry; Bacteria; Gene; Genetics","score_opus":0.016906370254208717,"score_gpt":0.22904861001911095,"score_spread":0.21214223976490224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809738299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942126,0.0033281285,0.00037353756,0.00008998678,0.0003499614,0.001154068,0.000255367,0.00019538161,0.000040935083],"genre_scores_gemma":[0.9972975,0.00077123736,0.0013196546,0.00014896755,0.00028264622,0.000052015188,0.000005217668,0.00010201779,0.000020690366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968625,0.00017586537,0.0009295208,0.0009816379,0.0005498188,0.0005006744],"domain_scores_gemma":[0.996682,0.00007324889,0.00067654473,0.0011803991,0.0010555789,0.0003322643],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008109991,0.00058698066,0.00089223473,0.00041473928,0.00018684624,0.00011983556,0.00029262074,0.00072519877,0.000060666454],"category_scores_gemma":[0.00047310544,0.0005700631,0.00022446252,0.0004933126,0.00040493073,0.00019773336,0.00047590432,0.0005076162,0.00006173097],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035482424,0.00019004295,0.07853424,0.002073447,0.00011444484,0.00004931861,0.00003423285,8.656873e-7,0.91829056,0.000033185384,0.00032324353,0.0000015707047],"study_design_scores_gemma":[0.0006512801,0.0001909576,0.27668148,0.00082148606,0.00025788078,1.0845888e-7,0.000023080758,0.000073270356,0.72086114,0.00000212572,0.000071315706,0.0003658896],"about_ca_topic_score_codex":0.00042743175,"about_ca_topic_score_gemma":0.00005190581,"teacher_disagreement_score":0.19814724,"about_ca_system_score_codex":0.00020941882,"about_ca_system_score_gemma":0.0006739439,"threshold_uncertainty_score":0.9996751},"labels":[],"label_agreement":null},{"id":"W2810273903","doi":"10.3390/jof4030080","title":"Special Issue “Fungal Burden in Different Countries”","year":2018,"lang":"en","type":"editorial","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"","keywords":"Thrush; Aspergillosis; Tinea capitis; Medicine; Mycosis; Antifungal; Dermatology; Immunology; Internal medicine","score_opus":0.009202892259064841,"score_gpt":0.2917161619638357,"score_spread":0.28251326970477086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810273903","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017514855,0.002487329,0.000012168897,0.00069373817,0.9696304,0.00026809712,0.00010127096,0.000010823697,0.009281278],"genre_scores_gemma":[0.0026718879,0.0026069372,0.00008658886,0.000067254325,0.9809547,0.0000015433188,0.000033182903,0.00004589884,0.013531991],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959276,0.00010647696,0.0012670027,0.00031858173,0.0019454691,0.0004348861],"domain_scores_gemma":[0.9967901,0.0005955577,0.00080246414,0.00041050973,0.0011221021,0.0002792304],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009680361,0.00039589973,0.0015284849,0.0003460495,0.000053515418,0.000058673042,0.00033665757,0.00094751536,0.0036458448],"category_scores_gemma":[0.0015546833,0.0002789023,0.0004846307,0.00016116034,0.00016578074,0.0001281505,0.000064533684,0.002044947,0.00021089813],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033117353,0.00016866534,0.0052079195,0.00034059718,0.0001581917,0.0009766833,0.00031535808,2.528972e-7,0.00009513563,0.0000047543017,0.98745996,0.0019607614],"study_design_scores_gemma":[0.0021638435,0.0012783542,0.0076195733,0.0013956218,0.00028753246,0.00004390551,0.00013213899,0.0000027690342,0.00010793827,0.000060014925,0.9866818,0.00022650974],"about_ca_topic_score_codex":0.000031808988,"about_ca_topic_score_gemma":0.00015297954,"teacher_disagreement_score":0.0148429675,"about_ca_system_score_codex":0.0007362985,"about_ca_system_score_gemma":0.0012877339,"threshold_uncertainty_score":0.9999663},"labels":[],"label_agreement":null},{"id":"W284973541","doi":"10.1155/2009/731070","title":"A Single‐Centre 10‐Year Experience with <i>Candida</i> Bloodstream Infections","year":2008,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Sherbrooke; Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Astellas Pharma","keywords":"Bloodstream infection; Candida infections; Medicine; Microbiology; Biology; Intensive care medicine; Candida albicans","score_opus":0.006455241937107562,"score_gpt":0.2185419439158262,"score_spread":0.21208670197871865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W284973541","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966948,0.0014980176,0.00007111475,0.0006601591,0.0001608797,0.00009514686,0.000032213506,0.000011974921,0.00077569176],"genre_scores_gemma":[0.99831426,0.0002703589,0.000023092025,0.00092289434,0.00018028442,0.0000017171434,0.000009787832,0.000009979228,0.00026764374],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99911565,0.000049638908,0.00027059854,0.00016576205,0.00008979583,0.00030853858],"domain_scores_gemma":[0.9979329,0.000073160896,0.00010313019,0.00011991651,0.00023410119,0.0015367867],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006625623,0.00012922144,0.00033715027,0.00013895189,0.00020310142,0.000010630217,0.00005913271,0.00013196355,0.0013026549],"category_scores_gemma":[0.00055247615,0.00009037345,0.00010338494,0.00015114792,0.00090481155,0.0000570661,0.000009137661,0.00024597518,0.000008744164],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000108752756,0.00021938661,0.9925479,0.000028166993,0.00008611837,0.0012096192,0.00029973307,4.2151265e-7,0.0010501466,0.00003349966,0.0034095156,0.0010067209],"study_design_scores_gemma":[0.010096605,0.008100173,0.78662014,0.0009972441,0.0006725736,0.05695897,0.002345981,0.000005045347,0.0008924187,0.00010535173,0.13258028,0.0006252315],"about_ca_topic_score_codex":0.0013215849,"about_ca_topic_score_gemma":0.016636334,"teacher_disagreement_score":0.2059278,"about_ca_system_score_codex":0.0001145585,"about_ca_system_score_gemma":0.002082295,"threshold_uncertainty_score":0.9996103},"labels":[],"label_agreement":null},{"id":"W2883460041","doi":"10.3390/genes9070359","title":"Strengthening the One Health Agenda: The Role of Molecular Epidemiology in Aspergillus Threat Management","year":2018,"lang":"en","type":"article","venue":"Genes","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Hainan Medical University","keywords":"Standardization; Public health; Aspergillus; Epidemiology; Environmental health; Global health; Environmental resource management; Business; Environmental planning; Biology; Political science; Medicine; Geography; Genetics","score_opus":0.047697846171460175,"score_gpt":0.3350118992379579,"score_spread":0.2873140530664977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883460041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9737014,0.015576699,0.00049431756,0.0051666717,0.000054329128,0.00033402833,0.0000030532717,0.000011547715,0.0046579186],"genre_scores_gemma":[0.9962816,0.0010167881,0.0009897521,0.0013774692,0.00007488259,0.000011288052,0.000003780595,0.0000073128144,0.00023708022],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99894357,0.00020384052,0.00031218672,0.00018210236,0.00012148716,0.00023684476],"domain_scores_gemma":[0.99926347,0.00012694682,0.000090138434,0.00045024432,0.00003718806,0.00003200233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011351968,0.00007884666,0.00025776614,0.000030304573,0.00008573958,0.0000017428563,0.00012673344,0.00003516205,0.00006723109],"category_scores_gemma":[0.00009432392,0.000041455132,0.000067032575,0.00013149816,0.00023950337,0.000011872399,0.000063775464,0.00009224232,0.000014427064],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003131558,0.00018038072,0.5976073,0.00015386129,0.00020303369,0.000013115517,0.0021028337,0.0000389852,0.009619766,0.025885692,0.00042388396,0.363458],"study_design_scores_gemma":[0.0005030967,0.00036499044,0.96554404,0.00012109151,0.00005636644,0.0000050100093,0.0035209728,0.00029884494,0.0100554135,0.0066117384,0.012833593,0.00008483322],"about_ca_topic_score_codex":0.00036397675,"about_ca_topic_score_gemma":0.0005407223,"teacher_disagreement_score":0.36793676,"about_ca_system_score_codex":0.000037991333,"about_ca_system_score_gemma":0.000039412127,"threshold_uncertainty_score":0.16904913},"labels":[],"label_agreement":null},{"id":"W2886929323","doi":"10.1016/j.ygeno.2018.08.001","title":"The tricarboxylic acid cycle, cell wall integrity pathway, cytokinesis and intracellular pH homeostasis are involved in the sensitivity of Candida albicans cells to high levels of extracellular calcium","year":2018,"lang":"en","type":"article","venue":"Genomics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"National Natural Science Foundation of China","keywords":"Biology; Candida albicans; Calcium; Extracellular; Calcineurin; Cytokinesis; Cell biology; Calcium in biology; Homeostasis; Calcium metabolism; Biochemistry; Antifungal drug; Intracellular; Cell; Microbiology; Cell division; Chemistry","score_opus":0.026487051738420475,"score_gpt":0.25256261409263553,"score_spread":0.22607556235421505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2886929323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99513155,0.0015511542,0.0010044464,0.0010742248,0.00009963895,0.0007562229,0.00026186244,0.000012519388,0.00010835723],"genre_scores_gemma":[0.9985395,0.00031451072,0.0006114433,0.0002845419,0.00010569721,0.000011092497,0.0000084768335,0.0000260284,0.00009869327],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978265,0.00031958596,0.00063369534,0.0004340847,0.00036228466,0.00042385122],"domain_scores_gemma":[0.99784,0.00055644737,0.0002881733,0.00086489844,0.00029641532,0.00015406594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002163867,0.00025919406,0.00064302573,0.00010929312,0.00014663902,0.000024112675,0.00024665977,0.00018725138,0.00002087404],"category_scores_gemma":[0.0003093822,0.00016735593,0.00014019354,0.00046401605,0.00053579593,0.00004843346,0.00011924186,0.00041341558,0.000006441489],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006584995,0.00027275382,0.024994297,0.00018323424,0.000045541776,0.000049066766,0.0029735838,0.0000074300638,0.9650125,0.00011565522,0.00012737555,0.0055600586],"study_design_scores_gemma":[0.0008808136,0.00034676853,0.2446493,0.00006931765,0.000112838876,0.0000053697268,0.004071567,0.00042121092,0.74745893,0.00019005845,0.0015908802,0.00020295315],"about_ca_topic_score_codex":0.002584949,"about_ca_topic_score_gemma":0.0063800593,"teacher_disagreement_score":0.219655,"about_ca_system_score_codex":0.00016407034,"about_ca_system_score_gemma":0.00024872832,"threshold_uncertainty_score":0.6824577},"labels":[],"label_agreement":null},{"id":"W2887000335","doi":"","title":"Coupling Temperature Sensing and Morphogenesis in the Pathogenic Fungus Candida albicans","year":2013,"lang":"en","type":"dissertation","venue":"Library and Archives Canada (Government of Canada)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Candida albicans; Pathogenic fungus; Fungus; Morphogenesis; Microbiology; Coupling (piping); Biology; Materials science; Botany; Composite material; Genetics","score_opus":0.0033750841726067496,"score_gpt":0.16687071232309894,"score_spread":0.16349562815049218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887000335","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97466195,0.002895291,0.0000010034192,0.0009365873,0.00012418856,0.00038375324,0.00013741663,0.0000044368094,0.020855395],"genre_scores_gemma":[0.984834,0.0009350611,0.00011132469,0.0008523713,0.00006546628,0.0000069506655,0.00011899295,0.000026482761,0.013049336],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977932,0.000045805173,0.0003250158,0.00033111384,0.0012272737,0.0002776212],"domain_scores_gemma":[0.99919677,0.00023324108,0.00014393515,0.00025112767,0.0000016370515,0.00017330809],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000023075763,0.00025609107,0.00042485542,0.000030163299,0.00015844706,0.000030388981,0.000105360064,0.00008686793,0.00003428267],"category_scores_gemma":[0.000009700684,0.00019105461,0.000041225532,0.00009646368,0.000058147467,0.00010511749,0.000025961777,0.0003414722,1.9384911e-9],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003595859,0.0000964637,0.28748208,0.0039836084,0.0003758808,0.0014352642,0.0018535822,0.00003750144,0.6770211,0.00361599,0.0022509042,0.018251782],"study_design_scores_gemma":[0.00056682754,0.000108532135,0.9442255,0.0008680932,0.00015914852,0.000031847572,0.028843699,0.0010796938,0.021735864,0.00011473182,0.0019011971,0.0003648522],"about_ca_topic_score_codex":0.014316295,"about_ca_topic_score_gemma":0.34600896,"teacher_disagreement_score":0.6567434,"about_ca_system_score_codex":0.000012573487,"about_ca_system_score_gemma":0.0021009617,"threshold_uncertainty_score":0.99224746},"labels":[],"label_agreement":null},{"id":"W2888116829","doi":"10.1038/s41423-018-0161-5","title":"Human dendritic cell-specific ICAM-3-grabbing non-integrin downstream signaling alleviates renal fibrosis via Raf-1 activation in systemic candidiasis","year":2018,"lang":"en","type":"article","venue":"Cellular and Molecular Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Taiwan University Hospital; National Yang-Ming University; National Taiwan University; Academia Sinica; York University","keywords":"Genetically modified mouse; Transgene; Biology; Kidney; Cancer research; Fibrosis; Tumor necrosis factor alpha; Pathogenesis; Candida albicans; Transforming growth factor; Immunology; Pathology; Medicine; Endocrinology; Microbiology; Gene","score_opus":0.00866819475966795,"score_gpt":0.23530223111194498,"score_spread":0.22663403635227702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888116829","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9793135,0.0048283855,0.014502388,0.00007694798,0.00008591293,0.00040786728,0.0000019155375,0.000041000218,0.0007421034],"genre_scores_gemma":[0.99902683,0.00017741577,0.00031321586,0.000094422336,0.00008195591,0.00002877545,0.000062000385,0.00003445309,0.000180938],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981701,0.00015613063,0.00047434808,0.0005589747,0.0001764378,0.00046403607],"domain_scores_gemma":[0.9992063,0.00005402589,0.00011854557,0.00038810205,0.00013656658,0.00009646347],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002913642,0.00026584306,0.0005075851,0.0002464318,0.00019523816,0.00003964526,0.00012593617,0.00028649683,0.00012676769],"category_scores_gemma":[0.000043863693,0.00025182756,0.00014065798,0.00024609783,0.00031904652,0.00009161811,0.00007009741,0.00038034655,0.000031116284],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022075033,0.00011123755,0.0040678494,0.00014863096,0.00007075504,0.000085185275,0.00051226985,0.0000026735092,0.9934273,0.000097789256,0.000055777316,0.0011997862],"study_design_scores_gemma":[0.0017119228,0.0004905902,0.008303253,0.0004614502,0.00007392613,0.000045700115,0.00095997576,0.00008379577,0.9872888,0.00014671302,0.00018378867,0.00025013942],"about_ca_topic_score_codex":0.00028927665,"about_ca_topic_score_gemma":0.000032624874,"teacher_disagreement_score":0.019713344,"about_ca_system_score_codex":0.00015681957,"about_ca_system_score_gemma":0.00006086721,"threshold_uncertainty_score":0.9999934},"labels":[],"label_agreement":null},{"id":"W2888572224","doi":"10.1139/cjm-2017-0559","title":"<i>Candida tropicalis</i> induces pro-inflammatory cytokine production, NF-κB and MAPKs pathways regulation, and dectin-1 activation","year":2018,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Peking Union Medical College; Government of Jiangsu Province; National Natural Science Foundation of China","keywords":"Candida tropicalis; Biology; Candida albicans; p38 mitogen-activated protein kinases; MAPK/ERK pathway; Signal transduction; Cytokine; Inflammation; Macrophage; NF-κB; Peripheral blood mononuclear cell; Microbiology; THP1 cell line; Cell biology; Secretion; Immunology; Cell culture; In vitro; Biochemistry","score_opus":0.015311457499618736,"score_gpt":0.22819000155731273,"score_spread":0.212878544057694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888572224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965833,0.00040137538,0.000087813576,0.002352334,0.00025798092,0.00017055825,0.000010046938,0.0000055607966,0.00013107495],"genre_scores_gemma":[0.99844897,0.00004060079,0.00030692553,0.0004068383,0.0005969594,0.0000012545097,0.000009381974,0.00000946562,0.00017959157],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99916875,0.00006923914,0.00032796938,0.00018784648,0.000041368934,0.00020483261],"domain_scores_gemma":[0.9988936,0.000031228676,0.00019305642,0.00012800691,0.00047224452,0.00028183122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030575553,0.00010530432,0.0002449968,0.0001738118,0.00017428558,0.000017047105,0.000046979203,0.0001408595,0.00007084984],"category_scores_gemma":[0.00041717137,0.000084866624,0.000032038566,0.000101783065,0.0004900418,0.000113492104,0.000008015371,0.00020572795,0.0000028378893],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016812443,0.000009286664,0.17095174,0.000038188187,0.00003689358,0.000015525806,0.00051767717,1.3877668e-7,0.82239175,0.00013277767,0.003817314,0.0019206102],"study_design_scores_gemma":[0.0010368939,0.00074876007,0.6290711,0.00021741686,0.00006875575,0.0018790724,0.00047112076,0.0000014532258,0.32687196,0.0006863151,0.03878535,0.0001617741],"about_ca_topic_score_codex":0.00025243932,"about_ca_topic_score_gemma":0.008274973,"teacher_disagreement_score":0.49551976,"about_ca_system_score_codex":0.000116553914,"about_ca_system_score_gemma":0.0008061493,"threshold_uncertainty_score":0.46176293},"labels":[],"label_agreement":null},{"id":"W2891166448","doi":"10.2147/idr.s170952","title":"Widespread amphotericin B-resistant strains of &lt;em&gt;Aspergillus fumigatus&lt;/em&gt; in Hamilton, Canada","year":2018,"lang":"en","type":"article","venue":"Infection and Drug Resistance","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Aspergillus fumigatus; Amphotericin B; Microbiology; Biology; Antifungal","score_opus":0.009888434196328346,"score_gpt":0.2461747274210415,"score_spread":0.23628629322471315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891166448","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98676,0.0012745641,0.00018827201,0.00033388796,0.00042277266,0.00042492652,0.000062514184,0.0000641711,0.010468881],"genre_scores_gemma":[0.99234,0.00044096322,0.00023048503,0.00047770512,0.0001502046,0.000017629669,0.000019772247,0.000033146804,0.006290051],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99734557,0.00013414846,0.0007652917,0.00062765647,0.0006165389,0.000510776],"domain_scores_gemma":[0.99833,0.00014580933,0.0002468543,0.0006005184,0.0004083464,0.0002684935],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005792312,0.00033235335,0.0006610374,0.00019377764,0.00019452538,0.000037539114,0.00011073685,0.0001562136,0.00017523085],"category_scores_gemma":[0.0004159186,0.00030528771,0.000117978816,0.00067949144,0.0003938712,0.00016400217,0.000039340663,0.00027510355,0.00000935653],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008191721,0.0011890356,0.3844771,0.0026752816,0.0003130319,0.00049711694,0.0069747297,0.000017740018,0.53131264,0.0055575627,0.0479985,0.0107955495],"study_design_scores_gemma":[0.0020991059,0.00023289365,0.9145876,0.00081373245,0.000066849156,0.000013612446,0.0005642001,0.00007919636,0.018557793,0.0002884268,0.062287275,0.0004093102],"about_ca_topic_score_codex":0.046905562,"about_ca_topic_score_gemma":0.96312124,"teacher_disagreement_score":0.91621566,"about_ca_system_score_codex":0.0004935955,"about_ca_system_score_gemma":0.0006572839,"threshold_uncertainty_score":0.9999399},"labels":[],"label_agreement":null},{"id":"W2891350451","doi":"10.1093/jac/dky353","title":"Effect of fluconazole prophylaxis on Candida fluconazole susceptibility in premature infants","year":2018,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; U.S. Food and Drug Administration; National Institutes of Health; Thrasher Research Fund","keywords":"Fluconazole; Candida albicans; Placebo; Mycosis; Medicine; Biology; Internal medicine; Microbiology; Surgery; Antifungal; Pathology","score_opus":0.005462360003087529,"score_gpt":0.2841256338845893,"score_spread":0.27866327388150175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891350451","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977767,0.00012495095,0.00002038223,0.00048134528,0.00028309086,0.0005005868,0.000014610273,0.000011632628,0.00078670285],"genre_scores_gemma":[0.9983134,0.00012541351,0.00030172186,0.0006596077,0.00039312706,0.0000010029045,0.0000035155665,0.000029529108,0.00017267936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99791336,0.00017606022,0.00086719944,0.00028188518,0.00042740692,0.00033410554],"domain_scores_gemma":[0.9983568,0.00016293614,0.00048805098,0.00042041813,0.0004306453,0.00014115182],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013633432,0.0002685613,0.00097111595,0.00024340102,0.000050257022,0.000016657674,0.00021230741,0.00025488684,0.00030168824],"category_scores_gemma":[0.00030062362,0.00018762688,0.00035664957,0.0003711118,0.00033915543,0.00014090935,0.000021496651,0.0005925126,0.000014438866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.019819824,0.0005763965,0.24740013,0.0004225276,0.00009377776,0.000044243916,0.0005148642,0.0000026874086,0.72137916,0.0000049496325,0.0024130172,0.007328393],"study_design_scores_gemma":[0.005777369,0.007625928,0.17531869,0.0007336947,0.000035232828,0.000070848284,0.000028643935,0.000013000607,0.80966246,0.000019432988,0.0005740128,0.0001406932],"about_ca_topic_score_codex":0.000048353628,"about_ca_topic_score_gemma":0.00010938743,"teacher_disagreement_score":0.08828327,"about_ca_system_score_codex":0.00017050523,"about_ca_system_score_gemma":0.00029332883,"threshold_uncertainty_score":0.7651202},"labels":[],"label_agreement":null},{"id":"W2892141896","doi":"10.1016/j.biopha.2018.08.121","title":"The impact of proton pump inhibitors on the pharmacokinetics of voriconazole in vitro and in vivo","year":2018,"lang":"en","type":"article","venue":"Biomedicine & Pharmacotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Pharmacology; Pharmacokinetics; Lansoprazole; Esomeprazole; In vivo; Chemistry; Omeprazole; Medicine; Internal medicine; Biology","score_opus":0.021270358022900695,"score_gpt":0.35926812855551216,"score_spread":0.3379977705326115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892141896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99503887,0.0010972247,0.000006482458,0.0018007257,0.000116636336,0.0013288151,0.000017670145,0.00000952649,0.0005840541],"genre_scores_gemma":[0.9971817,0.0019171309,0.000012868716,0.00042482433,0.0002820934,0.000041854648,0.0000018546591,0.000018393643,0.00011924074],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985176,0.00011830122,0.0005198694,0.00022007848,0.0003481335,0.00027603365],"domain_scores_gemma":[0.9990516,0.00029351213,0.0001735773,0.00027828393,0.00011829924,0.00008473016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009486208,0.00018175798,0.00037543365,0.0001869705,0.000048021102,0.0000049682267,0.00014496801,0.000055810287,0.00020779941],"category_scores_gemma":[0.00007181613,0.00008619333,0.000093309325,0.0006284693,0.0008139697,0.000035777826,0.000020374073,0.00022545029,0.0000018221474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005671427,0.00032512177,0.10595495,0.00006531707,0.000053840053,0.0000053923823,0.0005835689,5.5356156e-7,0.8773962,0.000008810472,0.0012305486,0.0087042395],"study_design_scores_gemma":[0.0041600703,0.0011396774,0.107601225,0.00017112776,0.000020452782,0.0000032237544,0.00017103029,0.0005315265,0.8835315,0.00004800848,0.0025464087,0.00007571372],"about_ca_topic_score_codex":0.00029252787,"about_ca_topic_score_gemma":0.000017488142,"teacher_disagreement_score":0.008628526,"about_ca_system_score_codex":0.000081520346,"about_ca_system_score_gemma":0.00012291959,"threshold_uncertainty_score":0.35148618},"labels":[],"label_agreement":null},{"id":"W2893251615","doi":"10.1007/s00253-018-9382-x","title":"Biosynthesis of pneumocandin lipopeptides and perspectives for its production and related echinocandins","year":2018,"lang":"en","type":"review","venue":"Applied Microbiology and Biotechnology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"National Key Research and Development Program of China; University Nursing Program for Young Scholar with Creative Talents in Heilongjiang Province; National Natural Science Foundation of China","keywords":"Echinocandins; Echinocandin; Caspofungin; Biology; Computational biology; Antifungal; Microbiology; Amphotericin B","score_opus":0.031833512631513114,"score_gpt":0.2880354689116745,"score_spread":0.25620195628016135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2893251615","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04187647,0.95569944,0.0000122499805,0.0004824274,0.0000772175,0.0015518062,0.00012735272,0.000069584785,0.000103445134],"genre_scores_gemma":[0.1241027,0.87503767,0.0004237848,0.000012951907,0.000046714693,0.000050011786,0.000058595757,0.000023963707,0.00024358729],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983351,0.00004513451,0.0004625716,0.00086426,0.00002214593,0.00027077453],"domain_scores_gemma":[0.9991287,0.00016570948,0.00029704615,0.0002951552,0.00006502743,0.000048388352],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00033879266,0.00034345448,0.0015757915,0.00032889034,0.00013843982,0.0000052573255,0.00008090126,0.0016585464,0.000012698416],"category_scores_gemma":[0.00030657699,0.00024709574,0.000116357296,0.00020057998,0.0019498765,0.000019689072,0.00011253461,0.00037682304,0.0000038479257],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006623873,0.00024601386,0.00017430838,0.026385799,0.0013973872,0.0000069307944,0.00042033105,3.3061816e-9,0.31469288,0.01580574,0.00056823186,0.63964],"study_design_scores_gemma":[0.0020424523,0.0035817511,0.00037666736,0.011805069,0.00651433,0.0038943284,0.0022673097,0.0000017064691,0.12140644,0.0019351514,0.8446485,0.0015262904],"about_ca_topic_score_codex":0.0000032258888,"about_ca_topic_score_gemma":0.000028324957,"teacher_disagreement_score":0.84408027,"about_ca_system_score_codex":0.000039538136,"about_ca_system_score_gemma":0.00008652025,"threshold_uncertainty_score":0.99999815},"labels":[],"label_agreement":null},{"id":"W2893517492","doi":"10.1503/cmaj.180597","title":"Chronic pulmonary aspergillosis after pulmonary tuberculosis","year":2018,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Pulmonary tuberculosis; Pulmonary aspergillosis; Tuberculosis; Aspergillosis; Emergency department; Computed tomography; Lung cancer; Surgery; Internal medicine; Radiology; Pathology; Immunology","score_opus":0.006373745923958514,"score_gpt":0.24191639024070855,"score_spread":0.23554264431675004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2893517492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8757307,0.0023968082,0.000055290053,0.062572174,0.0013251632,0.00024040014,0.000043686916,0.000050733517,0.05758508],"genre_scores_gemma":[0.9784628,0.00038526993,0.00006565604,0.0103554055,0.007205656,0.000010329361,0.000013005493,0.00002513151,0.0034767233],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99677974,0.00013971757,0.00049134117,0.0002798808,0.0015790594,0.00073027273],"domain_scores_gemma":[0.99648184,0.00008886821,0.00012484218,0.00022280894,0.0006749862,0.0024066635],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0013343212,0.0001743218,0.00032294999,0.0001964979,0.00035435232,0.000057516867,0.00016769239,0.0005268847,0.030566636],"category_scores_gemma":[0.001227842,0.00015034062,0.00023925384,0.00034710098,0.0001567534,0.00017540982,0.000022358761,0.0010123068,0.0010791547],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008272333,0.000066802764,0.8767431,0.000030686017,0.00018257737,0.0027397694,0.00009444501,9.5780315e-8,0.00026046202,0.000035546724,0.037557807,0.08220599],"study_design_scores_gemma":[0.0003528032,0.00015668935,0.75584686,0.00017226239,0.00008008608,0.0009675327,0.000132261,0.00024907663,0.0000757918,0.000107641994,0.24169447,0.00016455333],"about_ca_topic_score_codex":0.0013387629,"about_ca_topic_score_gemma":0.02461388,"teacher_disagreement_score":0.20413665,"about_ca_system_score_codex":0.0030079093,"about_ca_system_score_gemma":0.00406302,"threshold_uncertainty_score":0.99969864},"labels":[],"label_agreement":null},{"id":"W2893988193","doi":"10.1139/cjm-2018-0337","title":"The synergistic antifungal effects of sodium phenylbutyrate combined with azoles against <i>Candida albicans</i> via the regulation of the Ras–cAMP–PKA signalling pathway and virulence","year":2018,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Natural Science Foundation of Shandong Province; Department of Science and Technology of Shandong Province","keywords":"Phenylbutyrate; Candida albicans; Corpus albicans; Microbiology; Biology; Fluconazole; Fungal protein; Chemistry; Biochemistry; Gene; Saccharomyces cerevisiae; Antifungal","score_opus":0.005004984430257392,"score_gpt":0.19357560299433108,"score_spread":0.18857061856407367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2893988193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965092,0.001583806,0.00046798564,0.0007743822,0.00027672364,0.00026152137,0.000022387025,0.0000019106885,0.00010208518],"genre_scores_gemma":[0.99928176,0.000083040206,0.00004932839,0.00035396212,0.00010601807,0.0000012792399,0.000003116717,0.000010854628,0.00011062299],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988214,0.00024911296,0.00043040563,0.00013700308,0.00008783737,0.00027426274],"domain_scores_gemma":[0.99818575,0.0004633939,0.00049087714,0.00027535952,0.00043754795,0.00014704846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006385573,0.00013727574,0.00035211677,0.00005630057,0.00032164273,0.0000136101635,0.00025155346,0.000091911854,0.00001664824],"category_scores_gemma":[0.0002697211,0.00006198761,0.00009082263,0.00016010209,0.0019995414,0.000038524708,0.00001868269,0.00026944987,9.221774e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005810527,0.000015451069,0.030714288,0.00008208739,0.00010794161,0.0000134222555,0.00039723987,0.0000078570065,0.9664575,0.00017122329,0.00026809686,0.0011838685],"study_design_scores_gemma":[0.0023628531,0.0020316998,0.23076832,0.0012315335,0.0003011714,0.00025678435,0.0005520432,0.00013109154,0.7594794,0.00040203537,0.0022895013,0.00019355568],"about_ca_topic_score_codex":0.0004563299,"about_ca_topic_score_gemma":0.016368007,"teacher_disagreement_score":0.20697807,"about_ca_system_score_codex":0.00006131907,"about_ca_system_score_gemma":0.0009459342,"threshold_uncertainty_score":0.9133732},"labels":[],"label_agreement":null},{"id":"W2895438005","doi":"10.1093/cid/ciy827","title":"Isavuconazole Versus Caspofungin in the Treatment of Candidemia and Other Invasive Candida Infections: The ACTIVE Trial","year":2018,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":178,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Astellas Pharma Global Development; Astellas Pharma; Amplyx; Basilea Pharmaceutica; Astellas Foundation for Research on Metabolic Disorders; Cidara Therapeutics; Teva Pharmaceutical Industries","keywords":"Caspofungin; Medicine; Voriconazole; Clinical endpoint; Population; Internal medicine; Randomized controlled trial; Adverse effect; Surgery; Antifungal","score_opus":0.07676338696889055,"score_gpt":0.4163015400127329,"score_spread":0.33953815304384233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2895438005","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955553,0.0006698901,0.0000050281037,0.00035411367,0.0004544801,0.0010304891,0.000067531495,0.000022005423,0.0018411918],"genre_scores_gemma":[0.99752986,0.0009750106,0.0000010698108,0.000649811,0.00065842783,0.000102406055,0.000007041315,0.0000098694545,0.000066474175],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986294,0.00033293662,0.0004389963,0.00026261853,0.00015256622,0.00018350444],"domain_scores_gemma":[0.9956267,0.0036513049,0.00014168488,0.00038250416,0.00008829964,0.00010949693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031174094,0.00014269626,0.00038543937,0.00004565898,0.00015222689,0.000017156823,0.000062616644,0.000100804806,0.00012462269],"category_scores_gemma":[0.001914291,0.0000729318,0.00021623987,0.00021658966,0.00089830696,0.000047268964,0.000016803326,0.0001488809,0.000013724899],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016941886,0.0021045979,0.97331643,0.00001918058,0.00018583269,0.0000110686915,0.00075989723,6.2677276e-7,0.000009374605,0.00019208291,0.000536825,0.0059222197],"study_design_scores_gemma":[0.03384941,0.011278208,0.9474664,0.0000485904,0.0004510485,0.0000039830466,0.0010073523,0.000012469819,0.00009175465,0.0005452651,0.0051472606,0.00009830904],"about_ca_topic_score_codex":0.0017440079,"about_ca_topic_score_gemma":0.020140419,"teacher_disagreement_score":0.02585006,"about_ca_system_score_codex":0.0001175093,"about_ca_system_score_gemma":0.00033851597,"threshold_uncertainty_score":0.9977395},"labels":[],"label_agreement":null},{"id":"W2896039427","doi":"10.1097/gox.0000000000001927","title":"Orbitomaxillofacial Mucormycosis Requiring Complex Multifactorial Management","year":2018,"lang":"en","type":"article","venue":"Plastic & Reconstructive Surgery Global Open","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Mucormycosis; Fulminant; Amphotericin B; Mucorales; Medicine; Debridement (dental); Sepsis; Hyperbaric oxygen; Surgical debridement; Dermatology; Intensive care medicine; Surgery; Antifungal","score_opus":0.0588752861810142,"score_gpt":0.33098267664911296,"score_spread":0.27210739046809873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896039427","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9215929,0.000020206164,0.0013440934,0.000058753263,0.0046760845,0.0008825724,0.00018016784,0.00010060909,0.071144596],"genre_scores_gemma":[0.9933711,0.000019344596,0.0054039317,0.00016255914,0.00071046164,0.00003244439,0.00005465065,0.00002125311,0.0002242015],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973876,0.00009386208,0.00063418696,0.00077766815,0.00048351145,0.0006231678],"domain_scores_gemma":[0.998192,0.00043167817,0.00020673624,0.00048206557,0.00035636174,0.0003311433],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046489836,0.00033387396,0.00080548896,0.000105240186,0.00031383763,0.00015043147,0.0003186778,0.0001346697,0.0021844802],"category_scores_gemma":[0.00089702953,0.0003001584,0.00024633974,0.00050300197,0.00066963595,0.00040441044,0.00042918912,0.00016670718,0.00056818436],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036217093,0.0001880306,0.91875046,0.00009104218,0.00042621366,0.00016439069,0.00004353385,4.3608384e-7,0.0004890695,0.0022072035,0.0045954185,0.069422476],"study_design_scores_gemma":[0.0016898733,0.0002156937,0.9836759,0.00030696177,0.00020636107,0.0001467897,0.00048791623,0.00012630437,0.0005398894,0.0012053807,0.010954518,0.00044441744],"about_ca_topic_score_codex":0.0002925846,"about_ca_topic_score_gemma":0.00030143606,"teacher_disagreement_score":0.07177824,"about_ca_system_score_codex":0.00051776954,"about_ca_system_score_gemma":0.00026193785,"threshold_uncertainty_score":0.99994504},"labels":[],"label_agreement":null},{"id":"W2898699979","doi":"10.1016/j.jiac.2018.10.007","title":"Antifungal susceptibility trend and analysis of resistance mechanism for Candida species isolated from bloodstream at a Japanese university hospital","year":2018,"lang":"en","type":"article","venue":"Journal of Infection and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Eisai Canada; Shionogi; Astellas Pharma; Pfizer Japan; Dainippon Sumitomo Pharma; Takeda Pharmaceutical Company","keywords":"Micafungin; Fluconazole; Candida glabrata; Voriconazole; Microbiology; Anidulafungin; Caspofungin; Echinocandins; Biology; Candida tropicalis; Amphotericin B; Drug resistance; Itraconazole; Candida albicans; Antifungal","score_opus":0.008829508148144361,"score_gpt":0.24579091803345232,"score_spread":0.23696140988530795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898699979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982599,0.00011423696,0.00082436163,0.0002724515,0.00008131731,0.0001257385,0.00007865263,0.000008868401,0.00023448827],"genre_scores_gemma":[0.9973266,0.0009522657,0.0003389485,0.00007527755,0.0001014355,1.9450715e-7,0.000011035727,0.0000071681843,0.001187089],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991945,0.000037162903,0.00030613883,0.00019120517,0.0001558322,0.00011515382],"domain_scores_gemma":[0.99892724,0.000087403314,0.00033542528,0.00014799908,0.00039246466,0.00010945078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021994491,0.00011931164,0.00049311016,0.0001868972,0.000114493945,0.000012214542,0.000031813408,0.00010153426,0.00021954172],"category_scores_gemma":[0.000062083855,0.00009761418,0.00023062124,0.00032649148,0.00023419548,0.000101690486,0.000011340776,0.00009309246,1.9749366e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0055180374,0.00033752574,0.9096492,0.000064759006,0.0015282866,0.000006821739,0.0019452836,1.8481738e-7,0.07978049,0.0000778781,0.00048499767,0.0006065496],"study_design_scores_gemma":[0.0030440118,0.0015001214,0.97403985,0.00006305069,0.0010468424,0.0000072339844,0.00076834887,0.00017474331,0.018305575,0.00015126924,0.00079213426,0.00010680594],"about_ca_topic_score_codex":0.00018832798,"about_ca_topic_score_gemma":0.0042067114,"teacher_disagreement_score":0.064390674,"about_ca_system_score_codex":0.00009611095,"about_ca_system_score_gemma":0.00004059428,"threshold_uncertainty_score":0.39805907},"labels":[],"label_agreement":null},{"id":"W2898802359","doi":"10.1111/ctr.13437","title":"Echinocandin use in lung transplant recipients","year":2018,"lang":"en","type":"article","venue":"Clinical Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Echinocandin; Medicine; Micafungin; Echinocandins; Anidulafungin; Adverse effect; Tolerability; Internal medicine; Caspofungin; Voriconazole; Fluconazole; Antifungal","score_opus":0.09470154150757883,"score_gpt":0.410267969474692,"score_spread":0.3155664279671132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898802359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99268526,0.00002802912,0.0046172915,0.00014932336,0.00036630858,0.00030960696,0.00003721162,0.000045413843,0.0017615642],"genre_scores_gemma":[0.9970624,0.00071222964,0.0010336337,0.00047162996,0.00020021386,0.0000059420327,0.00012291838,0.000012445517,0.0003785983],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984619,0.00012640905,0.00062373775,0.00035801358,0.00020801825,0.00022194383],"domain_scores_gemma":[0.9991822,0.00033754285,0.000054506047,0.00022037118,0.0000684671,0.00013689906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006643903,0.00011403151,0.0002938118,0.00008437291,0.000054973043,0.000014495959,0.00006097794,0.00016894024,0.00015148631],"category_scores_gemma":[0.00013781084,0.00009595895,0.0001302312,0.00020762069,0.00020286895,0.00016802835,0.0000026577643,0.00027249596,0.000081928505],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029557622,0.00023804461,0.9931254,0.00008383927,0.000018910425,0.00011198269,0.00036899647,5.0201095e-7,0.0007631779,0.00013206803,0.00012208374,0.0020792822],"study_design_scores_gemma":[0.0024358183,0.00036278486,0.99500316,0.00036821305,0.00009913361,0.0000163504,0.000017389775,0.00041424483,0.00091668166,0.00011105601,0.00015156527,0.00010362161],"about_ca_topic_score_codex":0.00007184974,"about_ca_topic_score_gemma":0.0010459865,"teacher_disagreement_score":0.0043771374,"about_ca_system_score_codex":0.000041556184,"about_ca_system_score_gemma":0.000064915504,"threshold_uncertainty_score":0.39130926},"labels":[],"label_agreement":null},{"id":"W2899028693","doi":"10.14745/ccdr.v44i11a01","title":"Something wicked this way comes: What health care providers need to know about Candida auris","year":2018,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta","funders":"","keywords":"Candida auris; Medicine; Infection control; Intensive care medicine; Outbreak; Echinocandin; Infectious disease (medical specialty); Disease; Fluconazole; Antifungal; Internal medicine; Dermatology; Pathology","score_opus":0.014868694849108135,"score_gpt":0.3036686092146623,"score_spread":0.2887999143655542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899028693","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9037298,0.04773083,0.000081901846,0.03536137,0.0009099795,0.0022651865,0.00010620407,0.00022251849,0.0095922025],"genre_scores_gemma":[0.9807266,0.00090592256,0.0005094349,0.012337366,0.00014347631,0.00006212373,0.00032009665,0.000055016768,0.0049399496],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967103,0.0002204089,0.0007992805,0.00058337353,0.00090477976,0.0007818619],"domain_scores_gemma":[0.99386466,0.00015831883,0.00028223518,0.0030854086,0.0007361532,0.0018732238],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007093505,0.00032442654,0.0007856681,0.000114534436,0.0008317782,0.00012195406,0.00043982046,0.00008760561,0.0003382062],"category_scores_gemma":[0.001092332,0.00029634108,0.00017802342,0.00048167116,0.00037969046,0.00032769752,0.00025302058,0.00046138,0.000016129477],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018830918,0.00035829653,0.30930245,0.0024467523,0.00045030075,0.0048766956,0.012755552,0.000015917441,0.00031552667,0.00012308045,0.64387715,0.023595173],"study_design_scores_gemma":[0.0012963177,0.0003621227,0.107955895,0.002703965,0.00023517817,0.00009072338,0.048265677,0.00010054303,0.00033244325,0.000031460844,0.83795667,0.0006690306],"about_ca_topic_score_codex":0.68414766,"about_ca_topic_score_gemma":0.8794672,"teacher_disagreement_score":0.20134655,"about_ca_system_score_codex":0.0022430539,"about_ca_system_score_gemma":0.01859642,"threshold_uncertainty_score":0.99994886},"labels":[],"label_agreement":null},{"id":"W2899754799","doi":"","title":"Antibiotic Adjuvants to Combat Resistance","year":2018,"lang":"en","type":"article","venue":"IDWeek 2018","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Antibiotic resistance; Antibiotics; Medicine; Microbiology; Biology","score_opus":0.025164268787541685,"score_gpt":0.31377238919621164,"score_spread":0.28860812040866995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899754799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92877734,0.00031263017,0.00068636186,0.0017377223,0.0005892747,0.00039197571,0.000018995092,0.00012017663,0.06736556],"genre_scores_gemma":[0.96195453,0.000020006166,0.002307262,0.0022698233,0.0005631689,0.000002403768,0.000006632781,0.000024433242,0.032851756],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99856824,0.000031637002,0.00025100965,0.00041974476,0.00032920644,0.00040016414],"domain_scores_gemma":[0.998712,0.000042504456,0.000047470476,0.00069187616,0.00022317345,0.00028296394],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024450858,0.00015770414,0.0003173067,0.00007351116,0.00014043116,0.000021377227,0.00014406396,0.00009043656,0.0005301169],"category_scores_gemma":[0.00028537767,0.00013323601,0.00008308838,0.00030396966,0.00027028678,0.00007603976,0.00005598648,0.00012124022,0.0039769663],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002209277,0.00053616945,0.2109868,0.00029640866,0.000099011384,0.00015300392,0.0009168869,1.6463716e-7,0.08895309,0.0013661061,0.6842222,0.010260833],"study_design_scores_gemma":[0.0008980899,0.00076710363,0.83628833,0.00035425895,0.000052146428,0.000009412279,0.00015879114,0.000011674542,0.019726368,0.00031627546,0.14117175,0.00024580854],"about_ca_topic_score_codex":0.00003733939,"about_ca_topic_score_gemma":0.00063735404,"teacher_disagreement_score":0.62530154,"about_ca_system_score_codex":0.00008617276,"about_ca_system_score_gemma":0.0000965741,"threshold_uncertainty_score":0.9967986},"labels":[],"label_agreement":null},{"id":"W2901620093","doi":"","title":"Quantitative Analyses of Candida Albicans Biofilm Formation","year":2003,"lang":"en","type":"dissertation","venue":"MacSphere (McMaster University)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; McMaster University; Ontario Innovation Trust","keywords":"Biofilm; Candida albicans; Microbiology; Biology; Bacteria; Genetics","score_opus":0.03917959938805007,"score_gpt":0.30167169687245265,"score_spread":0.2624920974844026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901620093","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.303626,0.0003787869,0.0004355106,0.000024455965,0.00012766462,0.0003386201,0.0000684376,0.000028917899,0.6949716],"genre_scores_gemma":[0.21039471,0.00019932436,0.0010461478,0.000042995714,0.000015803354,7.290432e-7,0.00067554624,0.0000255624,0.7875992],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987264,0.00006929878,0.00031711374,0.00033684768,0.0003224879,0.00022783426],"domain_scores_gemma":[0.9988648,0.00005456253,0.00034818368,0.00028327943,0.00033250925,0.00011661365],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008053091,0.00026178724,0.00059365813,0.00027822057,0.00008539681,0.000012147633,0.00013388897,0.0002769699,0.04405423],"category_scores_gemma":[0.000056387827,0.00025599476,0.00028652133,0.0006651982,0.00008614758,0.00020810444,0.000014341453,0.00025893952,0.0000369846],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03806696,0.0025998878,0.099002115,0.02007694,0.006158169,0.0013625957,0.01499669,0.00013081172,0.38295442,0.02696245,0.018766295,0.38892266],"study_design_scores_gemma":[0.010987508,0.0043235975,0.13003868,0.004866368,0.008691732,0.000032875792,0.22834384,0.00075418147,0.20895943,0.0003967066,0.39986116,0.0027439266],"about_ca_topic_score_codex":0.0005038869,"about_ca_topic_score_gemma":0.0040120804,"teacher_disagreement_score":0.38617876,"about_ca_system_score_codex":0.00020562936,"about_ca_system_score_gemma":0.00028077108,"threshold_uncertainty_score":0.9999892},"labels":[],"label_agreement":null},{"id":"W2901702878","doi":"10.18502/cmm.4.3.173","title":"Invasive candidiasis and candidemia in pediatric and neonatal patients: A review of current guidelines","year":2018,"lang":"en","type":"review","venue":"Current Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Fluconazole; Invasive candidiasis; Medicine; Intensive care medicine; Antifungal; Pediatric Infectious Disease; Amphotericin B; Echinocandins; Pediatrics; Caspofungin; Dermatology","score_opus":0.09200895143665141,"score_gpt":0.43672416565443595,"score_spread":0.3447152142177845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901702878","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002906792,0.99418384,0.0000072355037,0.00017889298,0.00096884696,0.0016087027,0.00010110908,0.000012681401,0.00003188656],"genre_scores_gemma":[0.00018961505,0.99840665,0.000029932646,0.0002482497,0.000615802,0.00014011335,0.00033627797,0.00002545338,0.000007890583],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.995804,0.0004070567,0.0019608103,0.0007576699,0.00064144604,0.0004289854],"domain_scores_gemma":[0.9969539,0.0010031904,0.0006409874,0.0003720182,0.00047452818,0.000555386],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012393548,0.00045149456,0.0032687595,0.0003368492,0.00003704617,0.0000050264184,0.00020352862,0.00050273485,0.00032283523],"category_scores_gemma":[0.01840165,0.0003139776,0.00027589183,0.0005143676,0.00055893377,0.000051874176,0.00029586977,0.0009819658,0.0000144694],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020729927,0.0001260818,0.032996453,0.2700443,0.000026881904,0.000018690656,0.000023638193,1.9684569e-10,3.897278e-9,0.000016566384,0.014233714,0.682493],"study_design_scores_gemma":[0.00093800103,0.00031089364,0.0077674696,0.19326468,0.001406937,0.000045796012,0.0000068880368,9.2314804e-7,7.161197e-8,0.000027480412,0.79599,0.00024088979],"about_ca_topic_score_codex":0.000034935976,"about_ca_topic_score_gemma":0.00025569004,"teacher_disagreement_score":0.7817563,"about_ca_system_score_codex":0.00016442183,"about_ca_system_score_gemma":0.002624111,"threshold_uncertainty_score":0.9999312},"labels":[],"label_agreement":null},{"id":"W2902131891","doi":"10.3138/jammi.2018-0019","title":"Increased incidence, risk factors, and outcomes of <i>Trichosporon</i> spp bloodstream infections in immunocompromised hosts","year":2018,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Fungemia; Trichosporon; Incidence (geometry); Neutropenia; Medicine; Fluconazole; Internal medicine; Bloodstream infection; Antibiotics; Immunology; Mycosis; Antifungal; Dermatology; Microbiology; Biology; Chemotherapy","score_opus":0.003248940256375734,"score_gpt":0.2299014367288971,"score_spread":0.22665249647252136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902131891","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980936,0.00049998687,0.000005654723,0.0008727919,0.00026485423,0.00014217086,0.000068776484,0.0000026039727,0.00004956436],"genre_scores_gemma":[0.9990785,0.00052146526,0.000005844701,0.00030551653,0.000046388355,9.013105e-7,0.0000044604017,0.0000040983664,0.000032798773],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99868995,0.0002579995,0.0005579452,0.00010092004,0.00025704724,0.00013613561],"domain_scores_gemma":[0.997964,0.00059518014,0.00084138615,0.0001197108,0.0002908802,0.00018884474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009024641,0.00010199819,0.00046611013,0.0000848273,0.00008616822,0.0000036038768,0.00009178156,0.00015444202,0.000059848924],"category_scores_gemma":[0.0055357297,0.000063112864,0.0001070059,0.0001787699,0.00025380965,0.000050187657,0.000047528214,0.00035456018,1.1827561e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013182744,0.00022298438,0.99598885,0.0000375224,0.00020511984,0.000004785353,0.000048780497,4.2700373e-7,0.0021940465,0.000014131879,0.0009698771,0.00018165311],"study_design_scores_gemma":[0.0021876763,0.00024312288,0.9954905,0.000128252,0.00022419805,0.000021398519,0.00006183202,0.0000058760097,0.00092964957,0.00008367165,0.00057167973,0.000052163912],"about_ca_topic_score_codex":0.097053684,"about_ca_topic_score_gemma":0.23084196,"teacher_disagreement_score":0.13378829,"about_ca_system_score_codex":0.00025939563,"about_ca_system_score_gemma":0.0015103606,"threshold_uncertainty_score":0.9089591},"labels":[],"label_agreement":null},{"id":"W2902538604","doi":"10.1093/ofid/ofy210.1822","title":"2166. Preparedness for <i>Candida auris</i> in Canadian Nosocomial Infection Surveillance Program (CNISP) Hospitals, 2018","year":2018,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of Toronto; Sinai Health System","funders":"","keywords":"Candida auris; Medicine; Infection control; Preparedness; Clinical microbiology; Fluconazole; Outbreak; Antifungal; Microbiology; Intensive care medicine; Pathology; Dermatology; Biology","score_opus":0.010977772283485903,"score_gpt":0.323333271902126,"score_spread":0.3123554996186401,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902538604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97346497,0.0001795415,0.00006007822,0.0005246398,0.00078107737,0.005012466,0.00033026934,0.00017526292,0.019471673],"genre_scores_gemma":[0.99673074,0.00006333195,0.00006361754,0.00071564474,0.00032274637,0.0010869037,0.00026025582,0.00004688221,0.0007098541],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978432,0.000075124706,0.00039132262,0.00061874226,0.00020378787,0.0008677943],"domain_scores_gemma":[0.9983483,0.00007954941,0.00012455003,0.00052826595,0.0003181739,0.0006011881],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00032204422,0.00027466714,0.00050233625,0.00016876645,0.00044961806,0.00021628065,0.00020438335,0.00016492697,0.00021704896],"category_scores_gemma":[0.00053234544,0.0002587608,0.00018661203,0.0004423923,0.00026518057,0.0003899831,0.000102034086,0.00013801998,0.000070007074],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067884254,0.0006095138,0.9596799,0.00011352975,0.000055292738,0.000012218064,0.000089856054,0.0000019274623,0.000038016024,0.00021689147,0.030262077,0.008241918],"study_design_scores_gemma":[0.0024991154,0.0020126435,0.9248629,0.00013008856,0.00006230892,0.0000110158035,0.00008953887,0.00012753453,0.00015217584,0.0008200166,0.06888799,0.0003446659],"about_ca_topic_score_codex":0.31084597,"about_ca_topic_score_gemma":0.900342,"teacher_disagreement_score":0.5894961,"about_ca_system_score_codex":0.0008049724,"about_ca_system_score_gemma":0.001450319,"threshold_uncertainty_score":0.99998647},"labels":[],"label_agreement":null},{"id":"W2903211398","doi":"10.3138/jammi.2018-08.07.1","title":"Not so pretty in pink: A clinical vignette on invasive fungal sinusitis","year":2018,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Fungal sinusitis; Mucormycosis; Mucorales; Sinusitis; Empiric therapy; Medicine; Empiric treatment; Aspergillosis; Malignancy; Voriconazole; Hematopoietic stem cell transplantation; Leukemia; Dermatology; Intensive care medicine; Antifungal; Immunology; Biology; Pathology; Internal medicine; Microbiology; Transplantation; Antibiotics","score_opus":0.008954325209458661,"score_gpt":0.27530434027809053,"score_spread":0.2663500150686319,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903211398","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851821,0.00016245188,0.0000046634127,0.013526714,0.00076879025,0.00011702394,0.000035851193,0.0000023593498,0.00020005119],"genre_scores_gemma":[0.9884473,0.00018085628,0.0000037848374,0.010865191,0.0003643056,7.809754e-7,0.0000027533922,0.0000043716796,0.00013067061],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99830747,0.0004258375,0.00062988733,0.00012740702,0.00034086598,0.00016856233],"domain_scores_gemma":[0.9979832,0.0007434036,0.0005789982,0.0001251659,0.00031616582,0.00025305038],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0015299062,0.000087569366,0.00038766244,0.000048499183,0.000087388646,0.000005415113,0.00011812586,0.00021679784,0.00012436707],"category_scores_gemma":[0.008621864,0.000057124784,0.00014308664,0.000113547976,0.00030888847,0.000030333322,0.00004163467,0.00055930356,0.000001206607],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007668979,0.0001889085,0.9739097,0.00003679406,0.00013521733,0.0000641678,0.000042207444,5.6589e-7,0.0011060158,0.00007581522,0.022793563,0.0008801436],"study_design_scores_gemma":[0.0020215986,0.0005687803,0.99220973,0.00030832092,0.00010439591,0.000057808516,0.000026490752,0.000008225809,0.000581953,0.00011923587,0.003936545,0.000056909477],"about_ca_topic_score_codex":0.0057163476,"about_ca_topic_score_gemma":0.22818506,"teacher_disagreement_score":0.22246872,"about_ca_system_score_codex":0.0004419968,"about_ca_system_score_gemma":0.0037459473,"threshold_uncertainty_score":0.9997289},"labels":[],"label_agreement":null},{"id":"W2904079220","doi":"10.1534/genetics.118.301769","title":"Mms21: A Putative SUMO E3 Ligase in <i>Candida albicans</i> That Negatively Regulates Invasiveness and Filamentation, and Is Required for the Genotoxic and Cellular Stress Response","year":2018,"lang":"en","type":"article","venue":"Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Concordia University","funders":"Canadian Institutes of Health Research; Concordia University","keywords":"Biology; SUMO protein; Ubiquitin ligase; Mutant; Candida albicans; Filamentation; Cell biology; Gene; Transcription factor; Methane sulfonate; DNA damage; Genetics; Molecular biology; Ubiquitin; DNA","score_opus":0.031017441323461653,"score_gpt":0.29600718485892097,"score_spread":0.26498974353545934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904079220","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993823,0.003257194,0.00038376453,0.0014286115,0.000025870377,0.0008769896,0.00018066778,0.000008710439,0.000015185718],"genre_scores_gemma":[0.9971337,0.0007664727,0.0009917854,0.0006653955,0.00004967875,0.000036484224,0.000019108047,0.000017564467,0.00031984044],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99896103,0.000116835836,0.00020744251,0.0003464089,0.00015404775,0.0002142172],"domain_scores_gemma":[0.99881864,0.0006356417,0.00008624597,0.0002176699,0.00013920368,0.00010258915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037118272,0.00015221734,0.00023242876,0.000055770528,0.00017526507,0.00004446457,0.00005666398,0.00007723489,0.000014416996],"category_scores_gemma":[0.00021468068,0.00011326077,0.000025778527,0.00012660856,0.00073576655,0.000059426668,0.000056351735,0.00007666794,5.776757e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0067804805,0.00012348851,0.35969076,0.00037289804,0.0001294993,0.000033497,0.02429605,0.0000042109364,0.5983693,0.000057657064,0.00050975155,0.009632429],"study_design_scores_gemma":[0.0015665799,0.0005127472,0.5274643,0.00011097659,0.00008102129,0.0000066514363,0.0054831426,0.00036213014,0.46302146,0.0008383963,0.00043706986,0.000115546354],"about_ca_topic_score_codex":0.00005963983,"about_ca_topic_score_gemma":0.00055529433,"teacher_disagreement_score":0.16777353,"about_ca_system_score_codex":0.000033961736,"about_ca_system_score_gemma":0.00010539095,"threshold_uncertainty_score":0.46186402},"labels":[],"label_agreement":null},{"id":"W2904374704","doi":"10.1093/mmy/myy133","title":"Yeast-like filamentous fungi: Molecular identification and in vitro susceptibility study","year":2018,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital Foundation","funders":"Shandong Academy of Sciences; Astellas Pharma; Pfizer","keywords":"Posaconazole; Biology; Microbiology; Voriconazole; Itraconazole; Echinocandin; Echinocandins; Flucytosine; Geotrichum; Minimum inhibitory concentration; Yeast; Fungemia; Amphotericin B; Antifungal; Fluconazole; Caspofungin; Antimicrobial; Genetics","score_opus":0.013102844367873146,"score_gpt":0.31063171925389577,"score_spread":0.29752887488602264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904374704","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970894,0.000250038,0.0003744139,0.0006685009,0.00027243554,0.00071525597,0.000004283036,0.000040872448,0.00058482797],"genre_scores_gemma":[0.99833053,0.000029652238,0.00011273467,0.0009295423,0.00012457048,0.000038516835,0.000016604514,0.000011708316,0.00040614943],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979187,0.0002558231,0.00045377537,0.0005489767,0.00048919494,0.00033351098],"domain_scores_gemma":[0.99899787,0.000119299766,0.000060381917,0.00044148794,0.000112906724,0.00026803964],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012731104,0.0001357054,0.0003882509,0.000107725704,0.000058216527,0.0000107895585,0.00011962656,0.0002129934,0.0010835958],"category_scores_gemma":[0.0011788438,0.00011622064,0.000047407473,0.00024303082,0.00055285014,0.000042256856,0.00009893254,0.0003116109,0.00011164031],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022669083,0.0019530937,0.4685075,0.00008414785,0.000053911404,0.000545956,0.000729431,6.76888e-8,0.5068185,0.00005746788,0.00072642457,0.018256618],"study_design_scores_gemma":[0.0018588237,0.0008917219,0.9875333,0.000021203778,0.00005195209,0.000031202402,0.00061920116,0.00019117285,0.0077770734,0.00024032808,0.0006785749,0.00010545389],"about_ca_topic_score_codex":0.000119816774,"about_ca_topic_score_gemma":0.001049682,"teacher_disagreement_score":0.5190258,"about_ca_system_score_codex":0.00010448105,"about_ca_system_score_gemma":0.00017135026,"threshold_uncertainty_score":0.99982953},"labels":[],"label_agreement":null},{"id":"W2906643351","doi":"10.1128/aac.01651-18","title":"Method-Dependent Epidemiological Cutoff Values for Detection of Triazole Resistance in <i>Candida</i> and <i>Aspergillus</i> Species for the Sensititre YeastOne Colorimetric Broth and Etest Agar Diffusion Methods","year":2018,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario","funders":"National Institute of Allergy and Infectious Diseases; Universidad Nacional del Litoral","keywords":"Etest; Microbiology; Biology; Candida parapsilosis; Posaconazole; Candida glabrata; Candida krusei; Candida albicans; Corpus albicans; Itraconazole; Antifungal","score_opus":0.031356141425306565,"score_gpt":0.35411675106176416,"score_spread":0.3227606096364576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2906643351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9340322,0.0009886365,0.061356217,0.0021795356,0.000095384625,0.0011929306,0.000051222865,0.000015947186,0.000087892964],"genre_scores_gemma":[0.9522037,0.0051170387,0.038233876,0.0032557077,0.00018966988,0.000019271245,0.000009269549,0.000021632104,0.0009498611],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99877834,0.00014620813,0.0003591508,0.00039221667,0.00009293827,0.00023113868],"domain_scores_gemma":[0.9986756,0.00082043256,0.00014934097,0.00016703278,0.00012440483,0.0000632006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013348509,0.00017964083,0.0005409361,0.00007582926,0.00020350267,0.000019958745,0.000052674794,0.00014034657,0.000010778074],"category_scores_gemma":[0.00025490197,0.00011530275,0.00009652925,0.00017406569,0.00037207655,0.000047792546,0.000031304964,0.00010403158,1.7908476e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007407192,0.00024787747,0.029641602,0.00035552718,0.00012888164,0.000002151054,0.0007806757,8.309357e-7,0.9054369,0.000111815185,0.003277001,0.05260957],"study_design_scores_gemma":[0.008823261,0.0012017611,0.41616923,0.00019569664,0.000213143,0.000021596143,0.0003837534,0.0013204995,0.51829445,0.0008020107,0.052271288,0.0003033297],"about_ca_topic_score_codex":0.000100554906,"about_ca_topic_score_gemma":0.00017194511,"teacher_disagreement_score":0.38714245,"about_ca_system_score_codex":0.00002943184,"about_ca_system_score_gemma":0.000022792727,"threshold_uncertainty_score":0.47019097},"labels":[],"label_agreement":null},{"id":"W2907002983","doi":"10.1371/journal.pone.0209652","title":"Transcriptomic and proteomic host response to Aspergillus fumigatus conidia in an air-liquid interface model of human bronchial epithelium","year":2018,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Prevention of Organ Failure; Simon Fraser University; St. Paul's Hospital; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Aspergillus fumigatus; Biology; Transcriptome; Cell biology; Microbiology; A549 cell; Western blot; Shotgun proteomics; Host–pathogen interaction; Proteomics; Cell culture; Gene expression; Gene; Virulence; Genetics","score_opus":0.050531509036838326,"score_gpt":0.29638805150122205,"score_spread":0.2458565424643837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2907002983","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99779445,0.0001190101,0.00012945563,0.0006279144,0.000019849602,0.0010215229,0.000051439056,0.00003755063,0.00019882493],"genre_scores_gemma":[0.9981116,0.000013048184,0.0010303139,0.00021490666,0.000060107708,0.000029272145,0.000004759944,0.000029298026,0.00050668383],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985228,0.00012915414,0.00038376905,0.00040322074,0.00026497195,0.00029606692],"domain_scores_gemma":[0.9991276,0.00003175867,0.00005642634,0.00044129102,0.00015922217,0.00018366385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000495705,0.00016994309,0.00049532996,0.0001392557,0.00005971194,0.000008007885,0.00011847175,0.000119024895,0.00006177866],"category_scores_gemma":[0.00016571647,0.00015896645,0.000045878984,0.00012795645,0.00030944066,0.00011408181,0.00003879727,0.00021589774,0.00001985531],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.025135957,0.0010591481,0.008609691,0.00017827773,0.00004310222,0.0000045395477,0.0031728123,0.000003869906,0.9617015,0.000033737648,0.000010587476,0.0000467664],"study_design_scores_gemma":[0.0020096975,0.0058077304,0.16816194,0.00053521106,0.000085027394,0.000001276112,0.00019648996,0.0014689929,0.8215169,0.000045061628,0.0000041358403,0.00016753859],"about_ca_topic_score_codex":0.00012807678,"about_ca_topic_score_gemma":0.000731415,"teacher_disagreement_score":0.15955225,"about_ca_system_score_codex":0.000110507644,"about_ca_system_score_gemma":0.00015415979,"threshold_uncertainty_score":0.64824635},"labels":[],"label_agreement":null},{"id":"W2907458544","doi":"10.1128/mra.01444-18","title":"Draft Genome Sequence of Azole-Resistant Aspergillus thermomutatus (Neosartorya pseudofischeri) Strain HMR-AF-39, Isolated from a Human Nasal Septum Abscess Aspirate","year":2019,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut National de Santé Publique du Québec; Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"","keywords":"Aspergillus; Microbiology; Biology; Aspergillus fumigatus; Azole; Whole genome sequencing; Aspergillosis; Strain (injury); Genome; Antifungal; Gene; Genetics; Immunology; Anatomy","score_opus":0.021009928353749804,"score_gpt":0.2729535717882934,"score_spread":0.25194364343454356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2907458544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879302,0.0010993087,0.000043938693,0.00018352387,0.00021148949,0.00094930385,0.0061619496,0.00010036189,0.0033199557],"genre_scores_gemma":[0.9853743,0.00002018457,0.00013210134,0.0009390887,0.00008530306,0.000019710415,0.0069067697,0.00006437021,0.0064582145],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963706,0.00030425872,0.0010469216,0.0010747596,0.00028993166,0.00091352937],"domain_scores_gemma":[0.9977978,0.00007922459,0.0005094915,0.0010910672,0.00031005158,0.00021236582],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000555288,0.0005478478,0.0010935504,0.00015570216,0.00020906041,0.00003414248,0.00053087063,0.0004924382,0.0017182096],"category_scores_gemma":[0.000045521225,0.00047158555,0.00030336046,0.00032657263,0.0006604786,0.00012595307,0.00020901232,0.0006097345,0.00037314443],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014466498,0.00033082478,0.069575936,0.0001531308,0.00047400128,0.00010637646,0.00096344977,0.00001595525,0.9264275,0.000028076733,0.00035309646,0.00012503105],"study_design_scores_gemma":[0.027154343,0.010740519,0.3652777,0.0021081145,0.0012305822,0.00014560504,0.007519558,0.00038106818,0.05806888,0.00033811413,0.5233205,0.0037150024],"about_ca_topic_score_codex":0.00033097056,"about_ca_topic_score_gemma":0.00010552541,"teacher_disagreement_score":0.8683586,"about_ca_system_score_codex":0.00026751225,"about_ca_system_score_gemma":0.00026271906,"threshold_uncertainty_score":0.99977356},"labels":[],"label_agreement":null},{"id":"W2907838242","doi":"10.1128/mra.01446-18","title":"Draft Genome Sequences of Azole-Resistant and Azole-Susceptible Aspergillus turcosus Clinical Isolates Recovered from Bronchoalveolar Lavage Fluid Samples","year":2019,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut National de Santé Publique du Québec; Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"","keywords":"Bronchoalveolar lavage; Azole; Aspergillus; Microbiology; Biology; Strain (injury); Aspergillosis; Medicine; Immunology; Antifungal; Internal medicine; Lung","score_opus":0.021798743263338187,"score_gpt":0.2772119795903384,"score_spread":0.2554132363270002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2907838242","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98720306,0.007191226,0.00004327565,0.00025703953,0.00021618343,0.0006823226,0.0032383413,0.00005608124,0.0011124631],"genre_scores_gemma":[0.9912647,0.0008361262,0.0008448662,0.0008759198,0.00014980347,0.000009236542,0.0039304337,0.00003704797,0.002051887],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967402,0.00030180474,0.0011373835,0.0010019892,0.00018270305,0.0006358708],"domain_scores_gemma":[0.9980572,0.00034020183,0.0003882018,0.0008170452,0.00019469445,0.00020266678],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00080445665,0.00040792595,0.0011504476,0.00012351712,0.0001487395,0.000031609787,0.0003302094,0.00046197968,0.000995652],"category_scores_gemma":[0.00015489916,0.0003403363,0.00028015932,0.00015730421,0.00074047357,0.00012524518,0.00023999497,0.00044913898,0.00019385155],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016394813,0.00018077686,0.33782682,0.0000938391,0.00025025193,0.000014142906,0.00030659765,0.0000042722613,0.65865093,0.0000075927683,0.00075146294,0.00027379696],"study_design_scores_gemma":[0.011168677,0.00697802,0.18795827,0.0009210431,0.00064799417,0.00006836442,0.004300688,0.000073108444,0.040289216,0.0001858105,0.746113,0.00129582],"about_ca_topic_score_codex":0.0003704415,"about_ca_topic_score_gemma":0.00016922182,"teacher_disagreement_score":0.7453615,"about_ca_system_score_codex":0.00012148367,"about_ca_system_score_gemma":0.00018354545,"threshold_uncertainty_score":0.99991757},"labels":[],"label_agreement":null},{"id":"W2908351263","doi":"10.1371/journal.pgen.1007901","title":"Functional divergence of a global regulatory complex governing fungal filamentation","year":2019,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Université Laval; University of Toronto","funders":"Office of Experimental Program to Stimulate Competitive Research; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Ontario Genomics; Genome Canada","keywords":"Filamentation; Biology; Candida albicans; Genetics; Cell biology; Chromatin immunoprecipitation; Genetic screen; Saccharomyces cerevisiae; Mutant; Gene; Promoter; Gene expression","score_opus":0.040563282677376376,"score_gpt":0.27692803107227243,"score_spread":0.23636474839489605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2908351263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964054,0.0002624022,0.0001975358,0.00005443257,0.00011484703,0.0001991842,0.00005632571,0.000017957305,0.0026918883],"genre_scores_gemma":[0.99836254,0.000016622642,0.00081587624,0.00012084242,0.000059422382,0.0000019747888,0.000042953987,0.000006286681,0.00057349366],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99903446,0.000020695406,0.00020075576,0.00018055824,0.000437732,0.00012577558],"domain_scores_gemma":[0.9994735,0.000024662053,0.00008395494,0.00022625222,0.00013188996,0.00005971194],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00006597907,0.00007914767,0.00016594864,0.000010773342,0.000029257177,0.0000039161387,0.00004814339,0.000049715425,0.0012445339],"category_scores_gemma":[0.00003334863,0.000075775606,0.00006610801,0.000101904196,0.00006654337,0.000029047833,0.00003584728,0.000061016573,0.00016574479],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016755599,0.000096153235,0.83197963,0.000115952906,0.000038237955,0.0000016238129,0.000034756973,0.000057387086,0.1661597,0.00019795142,0.000858708,0.0002923595],"study_design_scores_gemma":[0.0005033899,0.00018612178,0.98120916,0.000045172652,0.000059031052,0.0000034618467,0.0001340311,0.0018751718,0.015629794,0.00006828536,0.00021916034,0.00006721649],"about_ca_topic_score_codex":0.000004172745,"about_ca_topic_score_gemma":0.000012200764,"teacher_disagreement_score":0.1505299,"about_ca_system_score_codex":0.00010957671,"about_ca_system_score_gemma":0.00010004943,"threshold_uncertainty_score":0.9996685},"labels":[],"label_agreement":null},{"id":"W2909545262","doi":"10.15761/cmid.1000145","title":"Resistance of Candida glabrata to drugs and the host immune system","year":2018,"lang":"en","type":"article","venue":"Clinical Microbiology and Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Universiti Sains Malaysia","keywords":"Candida glabrata; Immune system; Microbiology; Host (biology); Host resistance; Resistance (ecology); Biology; Immunology; Antifungal; Genetics; Ecology","score_opus":0.009712746637361342,"score_gpt":0.3004589377441463,"score_spread":0.29074619110678496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2909545262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918572,0.0053616166,0.000025600299,0.0006220517,0.0002290534,0.00037075265,0.000089178175,0.000033950942,0.0014106517],"genre_scores_gemma":[0.99806213,0.00039890147,0.000015251309,0.0009076494,0.00016973978,0.0000100341895,0.000011132258,0.000006791415,0.00041838764],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99886876,0.00017399302,0.00046104562,0.00030596694,0.000027454234,0.0001627584],"domain_scores_gemma":[0.9985803,0.00069938594,0.0001136602,0.00033139042,0.00013959162,0.00013568114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050997915,0.00011232746,0.00051895966,0.000028403363,0.0001698443,0.000008775198,0.00006447167,0.00011963548,0.000028482595],"category_scores_gemma":[0.00093016843,0.00006687042,0.000107989705,0.00010387496,0.0023743683,0.000026077596,0.00008819957,0.0001326904,0.000014403022],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005682376,0.00019957573,0.9740961,0.0003478001,0.00017465654,0.0000047492417,0.000170042,1.4053679e-8,0.011430506,0.005014495,0.0019784716,0.00090122106],"study_design_scores_gemma":[0.003887027,0.0008471505,0.9871397,0.00029647633,0.00028166999,0.000029672652,0.00032220013,0.0000026065345,0.0012258271,0.00014931863,0.0056966892,0.00012163029],"about_ca_topic_score_codex":0.00005291016,"about_ca_topic_score_gemma":0.00017672144,"teacher_disagreement_score":0.013043639,"about_ca_system_score_codex":0.000016836746,"about_ca_system_score_gemma":0.000078061195,"threshold_uncertainty_score":0.87484586},"labels":[],"label_agreement":null},{"id":"W2910164778","doi":"10.1080/1040841x.2018.1514366","title":"Prognostic factors in 264 adults with invasive<i>Scedosporium</i>spp. and<i>Lomentospora prolificans</i>infection reported in the literature and FungiScope<sup>®</sup>","year":2019,"lang":"en","type":"article","venue":"Critical Reviews in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Voriconazole; Fungemia; Scedosporium apiospermum; Amphotericin B; Antifungal; Medicine; Internal medicine; Malignancy; Epidemiology; Intensive care medicine; Biology; Dermatology","score_opus":0.016669550424722134,"score_gpt":0.2858405937743712,"score_spread":0.2691710433496491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2910164778","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9812349,0.015107959,0.0000062993454,0.0009125189,0.000048413374,0.0024979955,0.000015551104,0.00001327865,0.00016309477],"genre_scores_gemma":[0.9908939,0.007809286,0.00012690734,0.0008365969,0.000027985638,0.000096324286,0.00013156449,0.000015223292,0.00006222418],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99756646,0.00045125413,0.0007522332,0.00069656386,0.000082797655,0.00045071455],"domain_scores_gemma":[0.99870324,0.00059780205,0.00009094267,0.0004219498,0.000092444,0.00009361829],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011809701,0.0002834918,0.00084352517,0.0001510945,0.000033324803,0.000030819127,0.00008940178,0.0002597733,0.00005067374],"category_scores_gemma":[0.002490486,0.00016176334,0.00006206279,0.0005842421,0.00036058947,0.00012621058,0.000042196734,0.00075710303,0.0000148146355],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046181516,0.0002520339,0.98404735,0.0019956033,0.000008397431,0.00018682299,0.0026151084,4.9664953e-7,0.009360277,0.0002187308,0.000088421766,0.00076493627],"study_design_scores_gemma":[0.0023062953,0.0011769228,0.9795593,0.00847927,0.000081937076,0.0004885445,0.001176041,0.000016603419,0.0004755456,0.00025731226,0.005644166,0.0003380552],"about_ca_topic_score_codex":0.00007816833,"about_ca_topic_score_gemma":0.0005526438,"teacher_disagreement_score":0.009658998,"about_ca_system_score_codex":0.00007496606,"about_ca_system_score_gemma":0.000100765836,"threshold_uncertainty_score":0.65965176},"labels":[],"label_agreement":null},{"id":"W2910569998","doi":"10.3390/ijerph16020294","title":"E-Cigarettes Increase Candida albicans Growth and Modulate its Interaction with Gingival Epithelial Cells","year":2019,"lang":"en","type":"article","venue":"International Journal of Environmental Research and Public Health","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Réseau de Recherche en Santé Buccodentaire et Osseuse","keywords":"Candida albicans; Corpus albicans; Microbiology; Lactate dehydrogenase; Cell growth; Cell; Chemistry; Biology; Enzyme; Biochemistry","score_opus":0.031176093312725046,"score_gpt":0.3368182615646991,"score_spread":0.30564216825197404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2910569998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98967344,0.00032432334,0.00005372077,0.0089922575,0.00012044094,0.00020592505,0.000059127,0.000003495422,0.0005672902],"genre_scores_gemma":[0.99619925,0.0024680288,0.000102761776,0.0004930797,0.00018854358,0.0000017728523,0.000014682055,0.000011588809,0.00052028504],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979615,0.0001449381,0.00031738545,0.00019943177,0.0010616484,0.00031504984],"domain_scores_gemma":[0.998848,0.00019754264,0.00015317746,0.00008996025,0.00013588493,0.00057543797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011089116,0.00010078767,0.00022144734,0.00025625768,0.00008455431,0.00008147242,0.000117377764,0.000043067546,0.0005781772],"category_scores_gemma":[0.00014004765,0.00007311909,0.000039396553,0.00006793868,0.00018826466,0.00040444918,0.00007502943,0.00051761814,0.000010348667],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0050059613,0.0013287999,0.8686249,0.00017685528,0.00044660203,0.0003054365,0.0010843811,0.0000040940226,0.067837745,0.000619563,0.00043852298,0.054127127],"study_design_scores_gemma":[0.003638856,0.004391047,0.9771025,0.00029991998,0.000011270996,0.0006920282,0.00284499,0.00031446374,0.0029852903,0.00021684203,0.0073491093,0.00015363736],"about_ca_topic_score_codex":0.00032928766,"about_ca_topic_score_gemma":0.00003960986,"teacher_disagreement_score":0.10847763,"about_ca_system_score_codex":0.00033091428,"about_ca_system_score_gemma":0.00035830456,"threshold_uncertainty_score":0.63306355},"labels":[],"label_agreement":null},{"id":"W2912190166","doi":"10.1128/mbio.02529-18","title":"Genetic Analysis of <i>Candida auris</i> Implicates Hsp90 in Morphogenesis and Azole Tolerance and Cdr1 in Azole Resistance","year":2019,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":139,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Candida auris; Biology; Azole; Antifungal drug; Efflux; Virulence; Drug resistance; Ergosterol; Microbiology; Gene; Genetics; Antifungal; Biochemistry","score_opus":0.0052439873012347215,"score_gpt":0.2381248257368498,"score_spread":0.23288083843561508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912190166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99321175,0.0055433535,0.000015284531,0.00019645666,0.000016488937,0.00027326425,0.000026650183,0.000009112415,0.00070766],"genre_scores_gemma":[0.998056,0.0007190524,0.00033130063,0.00016924499,0.000009807862,0.00001164945,0.000008353242,0.000010210717,0.00068436604],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99881667,0.000027442476,0.00036580395,0.00040129237,0.00015988044,0.00022891433],"domain_scores_gemma":[0.99934345,0.0000768894,0.00007969138,0.00038049527,0.00004327625,0.00007620447],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002105888,0.00013189674,0.0005650245,0.000229754,0.000019406685,0.000009843319,0.00006696638,0.00008407175,0.0000631808],"category_scores_gemma":[0.00003370106,0.000121272766,0.00006473842,0.00077177474,0.00010481419,0.000051162824,0.000038660226,0.00010179495,0.000004718521],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028087618,0.00007023136,0.93670714,0.0001803121,0.000053236072,0.00001256583,0.0002163865,0.00002189024,0.06165605,0.000029068928,0.00006117048,0.0007110758],"study_design_scores_gemma":[0.00092702295,0.00004735136,0.99193394,0.00009960165,0.00013505976,0.0000014491691,0.000152433,0.00042656544,0.0058057895,0.000070954215,0.00028623774,0.000113576665],"about_ca_topic_score_codex":0.0005474386,"about_ca_topic_score_gemma":0.00530197,"teacher_disagreement_score":0.05585026,"about_ca_system_score_codex":0.000043177974,"about_ca_system_score_gemma":0.00004201955,"threshold_uncertainty_score":0.49453598},"labels":[],"label_agreement":null},{"id":"W2912255054","doi":"10.1007/s10096-019-03469-3","title":"Clinical features and cause analysis of false positive results of Aspergillus galactomannan assay in pulmonary cryptococcosis patients","year":2019,"lang":"en","type":"article","venue":"European Journal of Clinical Microbiology & Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Cryptococcus neoformans; Cryptococcosis; Galactomannan; Microbiology; Medical microbiology; Cryptococcus; Immunology; Aspergillus; Biology; Medicine; Aspergillosis","score_opus":0.017799196377496912,"score_gpt":0.3336056549597605,"score_spread":0.31580645858226364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912255054","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99709255,0.00085135613,0.000014231776,0.00009049629,0.00029445536,0.00029227915,0.00031163194,0.00000877595,0.0010442551],"genre_scores_gemma":[0.99848586,0.00090715225,0.00006951669,0.0002788991,0.00009841885,4.6095607e-7,0.000078665296,0.000018975774,0.00006207344],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99307007,0.0030645898,0.003078542,0.000423546,0.00013413234,0.00022910531],"domain_scores_gemma":[0.99431366,0.0024708353,0.0018038315,0.00038815307,0.0007510963,0.00027240656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034069377,0.0002139535,0.001822889,0.00041758464,0.000027729817,0.0000071531213,0.0001627372,0.00016132873,0.00005336119],"category_scores_gemma":[0.005808268,0.0001565755,0.0010781516,0.0004460384,0.0006356916,0.000093926355,0.00010966251,0.0006469224,0.000008079929],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007216087,0.0030028785,0.97790426,0.00006438371,0.0020987708,0.00016533816,0.000055043227,0.000010715442,0.0018460172,0.0000075547596,0.00034804415,0.007280886],"study_design_scores_gemma":[0.0052939258,0.003635901,0.98809177,0.00032131615,0.0021681204,0.000032110842,0.000046202502,0.000006183891,0.000081403276,0.000013307944,0.00018372248,0.0001260384],"about_ca_topic_score_codex":0.00001798246,"about_ca_topic_score_gemma":0.000046630023,"teacher_disagreement_score":0.010187486,"about_ca_system_score_codex":0.000032313514,"about_ca_system_score_gemma":0.00015063278,"threshold_uncertainty_score":0.6953459},"labels":[],"label_agreement":null},{"id":"W2912782996","doi":"10.1503/cmaj.180963","title":"Associations between low- and high-dose oral fluconazole and pregnancy outcomes: 3 nested case–control studies","year":2019,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Université de Montréal; McGill University; Centre Hospitalier Universitaire Sainte-Justine","funders":"Canadian Institutes of Health Research; Réseau Québécois de Recherche sur les Médicaments","keywords":"Nested case-control study; Fluconazole; Pregnancy; Medicine; Computer science; Case-control study; Obstetrics; Internal medicine; Antifungal; Biology; Dermatology","score_opus":0.016700002990290303,"score_gpt":0.29172791938698955,"score_spread":0.27502791639669927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912782996","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98159003,0.0016375579,0.000020940493,0.015721232,0.00031747558,0.00031118304,0.0001800066,0.000018421772,0.00020312385],"genre_scores_gemma":[0.9951762,0.00022465977,0.00006314853,0.00301739,0.00023222968,0.000002959616,0.000017065327,0.000014391043,0.0012519773],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978068,0.00020362217,0.0005235659,0.00022689735,0.0007871361,0.0004519818],"domain_scores_gemma":[0.99712956,0.00072133244,0.00024092455,0.0001219425,0.00049816014,0.0012880801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014404304,0.00016074549,0.0006544806,0.00013382043,0.00031878919,0.00006704195,0.000061426144,0.00033801227,0.00046781622],"category_scores_gemma":[0.004098398,0.00013032455,0.00008870346,0.00015278386,0.00007120303,0.00018035505,0.000017288412,0.0007339947,0.000047568894],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005735537,0.000018639721,0.9857408,0.000034907833,0.0005383939,0.000786814,0.00034254373,1.9682331e-7,0.0000059881295,0.00008125045,0.001367618,0.011077115],"study_design_scores_gemma":[0.0033061602,0.00009588866,0.9937868,0.00029675543,0.00024113405,0.00019977678,0.00090500567,0.000046719186,0.0000021832168,0.00018026556,0.00080840377,0.00013091005],"about_ca_topic_score_codex":0.0016526673,"about_ca_topic_score_gemma":0.024921974,"teacher_disagreement_score":0.023269307,"about_ca_system_score_codex":0.0008088672,"about_ca_system_score_gemma":0.0011769512,"threshold_uncertainty_score":0.9928707},"labels":[],"label_agreement":null},{"id":"W2912937520","doi":"10.3389/fcimb.2019.00016","title":"Phagocytosis of Aspergillus fumigatus by Human Bronchial Epithelial Cells Is Mediated by the Arp2/3 Complex and WIPF2","year":2019,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Prevention of Organ Failure; Simon Fraser University; St. Paul's Hospital; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Internalization; Aspergillus fumigatus; Microbiology; Cell biology; Phagocytosis; Biology; Gene knockdown; Cell culture; Cell","score_opus":0.007474168215643163,"score_gpt":0.22705384380075544,"score_spread":0.21957967558511227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912937520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99529696,0.0022219028,0.0007375346,0.00016506971,0.0004736975,0.00039776444,0.00021084333,0.000014519531,0.0004816926],"genre_scores_gemma":[0.9975686,0.0007751311,0.00009711026,0.00039361915,0.000040762443,0.000004244413,0.00028177566,0.000013020814,0.0008257093],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99889386,0.00013881552,0.00032867707,0.00034120007,0.000056357647,0.00024111723],"domain_scores_gemma":[0.9995309,0.000046540757,0.0001127234,0.00020420183,0.0000430437,0.00006260801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002556693,0.00016814373,0.00045615126,0.000078925965,0.0000908502,0.000008912703,0.000057033925,0.00023126348,0.00027164735],"category_scores_gemma":[0.00001679393,0.00012487525,0.00007721411,0.00011142993,0.00048133457,0.00004640327,0.000042452102,0.0002538921,0.0000093074],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015096669,0.000086759945,0.20841067,0.000061495215,0.000052499614,7.128293e-7,0.00016474735,2.4494312e-7,0.7587261,0.00000803353,0.031734448,0.00060329685],"study_design_scores_gemma":[0.0046409843,0.00094749517,0.037626933,0.00004102758,0.00011795489,0.000023593266,0.00032830186,0.00012948673,0.8339207,0.00009134138,0.121851936,0.00028023808],"about_ca_topic_score_codex":0.00035936382,"about_ca_topic_score_gemma":0.000033221702,"teacher_disagreement_score":0.17078373,"about_ca_system_score_codex":0.00005168358,"about_ca_system_score_gemma":0.000026578835,"threshold_uncertainty_score":0.5092265},"labels":[],"label_agreement":null},{"id":"W2913093012","doi":"10.1111/bcpt.13208","title":"Identifying factors affecting the pharmacokinetics of voriconazole in patients with liver dysfunction: A population pharmacokinetic approach","year":2019,"lang":"en","type":"article","venue":"Basic & Clinical Pharmacology & Toxicology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Central South University","keywords":"Voriconazole; Pharmacokinetics; Medicine; Pharmacology; CYP2C19; Bioavailability; Population; Volume of distribution; Internal medicine; Antifungal; Cytochrome P450; Dermatology","score_opus":0.0395434780954393,"score_gpt":0.3492527960026292,"score_spread":0.3097093179071899,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913093012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949394,0.00018761805,0.00013849404,0.00019470604,0.0018134145,0.0019620508,0.000008687969,0.00004805415,0.0007075712],"genre_scores_gemma":[0.99756265,0.00008102735,0.00021427553,0.0014661282,0.0003083444,0.000030387886,0.000060727893,0.000035534125,0.00024094094],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99658316,0.00075357023,0.0010719429,0.00069868536,0.00037862203,0.00051401096],"domain_scores_gemma":[0.9975048,0.0013035171,0.00048477214,0.00034242234,0.00020682337,0.00015768524],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011656694,0.00030117188,0.00089137506,0.00017157827,0.00009178649,0.00000865314,0.00024233518,0.0002997541,0.0011462767],"category_scores_gemma":[0.00017858346,0.00020412994,0.00023445368,0.00051504193,0.0003797954,0.00013756285,0.00012486424,0.0010747083,0.00004206329],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028914488,0.002058145,0.98606807,0.00021788504,0.00023537848,0.000012171713,0.00021610041,0.00017971313,0.005364047,0.0000168273,0.0005297869,0.002210407],"study_design_scores_gemma":[0.010179116,0.0013586883,0.98462844,0.000038026254,0.0005517645,0.0000050820963,0.00019496898,0.001208037,0.0013736937,0.0000139875265,0.0002611506,0.00018706429],"about_ca_topic_score_codex":0.000048128575,"about_ca_topic_score_gemma":0.000023122331,"teacher_disagreement_score":0.0072876676,"about_ca_system_score_codex":0.00014814595,"about_ca_system_score_gemma":0.00011339301,"threshold_uncertainty_score":0.9997668},"labels":[],"label_agreement":null},{"id":"W2913301244","doi":"10.1080/21505594.2019.1568174","title":"Galactosaminogalactan (GAG) and its multiple roles in <i>Aspergillus</i> pathogenesis","year":2019,"lang":"en","type":"review","venue":"Virulence","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research; Austrian Science Fund; Canada Research Chairs; CS Fund","keywords":"Aspergillosis; Pathogenesis; Aspergillus fumigatus; Biology; Aspergillus; Virulence; Disease; Microbiology; Immunology; Pneumonia; Medicine; Pathology; Gene","score_opus":0.06823210868936008,"score_gpt":0.3381879483475678,"score_spread":0.26995583965820774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913301244","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006093879,0.99118614,0.0000048260804,0.000019583253,0.00013190096,0.0011673725,0.00013159608,0.00004866183,0.0012160272],"genre_scores_gemma":[0.030425502,0.9680105,0.000058066136,0.00009140441,0.000093104856,0.000054441505,0.00006425069,0.000061254264,0.0011414667],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99741954,0.00016697565,0.0006836047,0.0008930984,0.00037315232,0.00046364687],"domain_scores_gemma":[0.99848354,0.0003668594,0.00022074993,0.0006612039,0.00007137443,0.0001962597],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00040652684,0.00051300705,0.0020581158,0.00021267416,0.000054737673,0.000026397329,0.00021311495,0.00046626953,0.0000824182],"category_scores_gemma":[0.00048615437,0.00039919993,0.00034143875,0.0004061959,0.00008795147,0.000131116,0.00012711335,0.00054836756,0.00031210075],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007308953,0.00017754042,0.030440694,0.03396487,0.00006244909,0.0001723794,0.000082134175,1.3996788e-7,0.0003970283,0.00004829692,0.00010105171,0.9344803],"study_design_scores_gemma":[0.00088468957,0.00019728538,0.019490233,0.037200607,0.0008508882,0.00008930641,0.00006922708,0.00007348353,0.000064545944,0.000008354039,0.94026095,0.00081042526],"about_ca_topic_score_codex":0.000023915458,"about_ca_topic_score_gemma":0.00012564899,"teacher_disagreement_score":0.9401599,"about_ca_system_score_codex":0.0001615408,"about_ca_system_score_gemma":0.00037555734,"threshold_uncertainty_score":0.999846},"labels":[],"label_agreement":null},{"id":"W2913554862","doi":"10.3390/jof5010011","title":"Invasive Candidiasis in Infants and Children: Recent Advances in Epidemiology, Diagnosis, and Treatment","year":2019,"lang":"en","type":"review","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Sick Kids Foundation; Gilead Sciences","keywords":"Micafungin; Echinocandin; Epidemiology; Medicine; Anidulafungin; Intensive care medicine; Meningoencephalitis; Amphotericin B; Incidence (geometry); Pediatrics; Invasive candidiasis; Biomarker; Antifungal; Internal medicine; Fluconazole; Immunology; Dermatology; Biology","score_opus":0.08906249525377165,"score_gpt":0.4012816586400078,"score_spread":0.3122191633862362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913554862","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.029408233,0.9694099,5.1240715e-7,0.00016481215,0.0001364338,0.0007626061,0.000027841252,0.0000018569405,0.00008781084],"genre_scores_gemma":[0.0019692357,0.9975812,0.00012621253,0.000100200465,0.00013873965,0.00002170208,0.000013963401,0.000015908192,0.00003284379],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977803,0.00033263973,0.0011904624,0.00029481068,0.0001316191,0.00027015276],"domain_scores_gemma":[0.9971591,0.0016608929,0.00075082754,0.00019264764,0.000060101916,0.00017638336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095147686,0.00029686687,0.003003322,0.0003679373,0.000017840583,0.000008190319,0.00007070532,0.00026252595,0.00003417069],"category_scores_gemma":[0.0013413683,0.00018407746,0.00023079738,0.00020596093,0.00008551335,0.00016152668,0.000032484444,0.00049233733,0.0000033182832],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008419347,0.00008825505,0.4188634,0.001442232,0.00007587664,0.00006849079,0.00004171833,1.6708914e-7,9.1948785e-8,0.0000025450404,0.00008131755,0.5792517],"study_design_scores_gemma":[0.0017121756,0.001187752,0.40144783,0.029602261,0.0007922825,0.00046350234,0.00007038972,3.8547137e-7,0.0000018294163,0.000049842856,0.5644636,0.0002081489],"about_ca_topic_score_codex":0.00006240247,"about_ca_topic_score_gemma":0.0010936267,"teacher_disagreement_score":0.57904357,"about_ca_system_score_codex":0.000411339,"about_ca_system_score_gemma":0.00055419997,"threshold_uncertainty_score":0.7506461},"labels":[],"label_agreement":null},{"id":"W2913937522","doi":"10.1002/9780470015902.a0000494.pub3","title":"Immunity to Fungi","year":2018,"lang":"en","type":"other","venue":"Encyclopedia of Life Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Immune system; Disease; Immunity; Acquired immune system; Innate immune system; Immunology; Host (biology); Medicine; Ecology","score_opus":0.02379353313117322,"score_gpt":0.31224147412209763,"score_spread":0.2884479409909244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913937522","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0138492305,0.0021182639,0.00005324826,0.0002531322,0.00061487383,0.00035390686,0.000023727065,0.000074903684,0.9826587],"genre_scores_gemma":[0.017117133,0.0020621836,0.0042498354,0.00044522274,0.0009348005,0.000008371311,0.0000071964537,0.00007877462,0.97509646],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983435,0.000048652637,0.00030135547,0.00040382784,0.00061858894,0.0002840767],"domain_scores_gemma":[0.99890786,0.00007439131,0.00016869752,0.00050362555,0.00008013481,0.0002652869],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00059344294,0.00019017841,0.00050444884,0.0002766403,0.000077073666,0.0000074927448,0.00038244468,0.00016856537,0.008935793],"category_scores_gemma":[0.00080374815,0.00014074298,0.00011620647,0.0005588413,0.0007918039,0.00003836213,0.000101256046,0.00012762262,0.0010794869],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037264403,0.00007346958,0.074385084,0.00014951343,0.000022956325,0.0000026813402,0.0001328025,8.100412e-8,0.00008933625,0.000098160446,0.92320853,0.0018001333],"study_design_scores_gemma":[0.00014805676,0.00047302607,0.042788856,0.0003885228,0.000036644953,0.0000010611477,0.00026851034,0.0000013626252,0.000056078483,0.00006118062,0.9556054,0.00017128394],"about_ca_topic_score_codex":0.00039668023,"about_ca_topic_score_gemma":0.0003807959,"teacher_disagreement_score":0.032396898,"about_ca_system_score_codex":0.000019943114,"about_ca_system_score_gemma":0.0006712598,"threshold_uncertainty_score":0.9996983},"labels":[],"label_agreement":null},{"id":"W2914552035","doi":"10.1038/s41596-018-0122-6","title":"Design, execution, and analysis of CRISPR–Cas9-based deletions and genetic interaction networks in the fungal pathogen Candida albicans","year":2019,"lang":"en","type":"article","venue":"Nature Protocols","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Banting Research Foundation; Natural Sciences and Engineering Research Council of Canada; Burroughs Wellcome Fund","keywords":"CRISPR; Candida albicans; Biology; Cas9; Genome editing; Computational biology; Gene; Plasmid; Genetics; Genome; Model organism","score_opus":0.015920883856954737,"score_gpt":0.33201621289535405,"score_spread":0.3160953290383993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914552035","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9144626,0.00057770085,0.030126259,0.0005331098,0.00002824549,0.054024212,0.000024387686,0.000017368093,0.00020610854],"genre_scores_gemma":[0.9913028,0.000013923101,0.0009269235,0.00044783496,0.000024018307,0.0072198855,0.000023895154,0.0000069834723,0.000033749777],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989336,0.000192775,0.00025622093,0.00025901617,0.00020887548,0.00014949219],"domain_scores_gemma":[0.9991989,0.00022684879,0.0000980786,0.00029676218,0.0001299077,0.00004946264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004336297,0.00011286578,0.00030321843,0.00016470694,0.000048892507,0.00002133317,0.000064399705,0.00020750103,0.000060816394],"category_scores_gemma":[0.00010503187,0.0000757443,0.00007092707,0.0005992127,0.00006819572,0.000048062666,0.000013763567,0.00045796004,7.245762e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008979464,0.00013987473,0.9886483,0.00014248487,0.00012026048,0.000016155624,0.0002612754,0.00094296905,0.00675831,0.000062785184,0.00016436704,0.0018452866],"study_design_scores_gemma":[0.00088473177,0.00033120892,0.9721279,0.00015212575,0.00033273586,0.000009382515,0.00017514428,0.024755944,0.00047643462,0.000036058973,0.0006326759,0.0000856318],"about_ca_topic_score_codex":0.000069529095,"about_ca_topic_score_gemma":0.00043689794,"teacher_disagreement_score":0.07684018,"about_ca_system_score_codex":0.000043272055,"about_ca_system_score_gemma":0.0000808477,"threshold_uncertainty_score":0.30887628},"labels":[],"label_agreement":null},{"id":"W2916687671","doi":"10.3390/jof5010017","title":"Linking Cellular Morphogenesis with Antifungal Treatment and Susceptibility in Candida Pathogens","year":2019,"lang":"en","type":"review","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research; Banting Research Foundation","keywords":"Morphogenesis; Antifungal; Biology; Microbiology; Genetics; Gene","score_opus":0.05109719731651353,"score_gpt":0.3211116082912482,"score_spread":0.27001441097473466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2916687671","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0870544,0.91171443,0.00003564741,0.000016800532,0.00017214389,0.00077183376,0.000052319076,0.000007723797,0.00017469953],"genre_scores_gemma":[0.028981315,0.9694573,0.00054445275,0.00001995931,0.00029151604,0.0000058930605,0.0000313149,0.00005802872,0.0006102017],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971491,0.00023515732,0.0012776438,0.0004902756,0.00044341706,0.0004044004],"domain_scores_gemma":[0.9977506,0.00028730917,0.0008946959,0.0005601964,0.00023493536,0.00027225522],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00090346293,0.00053627114,0.0033898395,0.00039879815,0.000052188134,0.000039068927,0.00014229315,0.00037227478,0.00008427537],"category_scores_gemma":[0.00006863918,0.00031740248,0.0007447262,0.00037244486,0.000103348364,0.00010512409,0.000038086673,0.00063461537,0.000014120791],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005998542,0.0004948225,0.1530621,0.019799994,0.0006100214,0.0020567283,0.00016424985,0.0000013832689,0.0005990712,0.0000059855033,0.00005745575,0.82254833],"study_design_scores_gemma":[0.006124866,0.008194209,0.032859996,0.0859103,0.013935998,0.0036992028,0.00043444175,0.000019791536,0.00026221896,0.000021925895,0.84717023,0.0013668429],"about_ca_topic_score_codex":0.000048763566,"about_ca_topic_score_gemma":0.00017064062,"teacher_disagreement_score":0.8471128,"about_ca_system_score_codex":0.0007420579,"about_ca_system_score_gemma":0.001779187,"threshold_uncertainty_score":0.9999278},"labels":[],"label_agreement":null},{"id":"W2920766005","doi":"10.1093/mmy/myy067","title":"Beyond tissue concentrations: antifungal penetration at the site of infection","year":2018,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Antifungal; Antifungal drug; Antifungal drugs; Drug; Penetration (warfare); Echinocandins; Medicine; Biology; Pharmacology; Intensive care medicine; Microbiology; Voriconazole","score_opus":0.034926496876316666,"score_gpt":0.3805637356394818,"score_spread":0.34563723876316516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920766005","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004437068,0.9886241,0.00017910842,0.00028195095,0.00077769667,0.0011982212,0.000056349207,0.000032977772,0.004412555],"genre_scores_gemma":[0.0039050356,0.9921205,0.00002883812,0.0003064549,0.0007714955,0.00006800443,0.00066691433,0.000022068063,0.002110672],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99740064,0.00046693892,0.00086160813,0.00041037097,0.00057904574,0.00028140223],"domain_scores_gemma":[0.9980008,0.00074649183,0.00037726288,0.00049830007,0.00020040534,0.00017674407],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009848058,0.00024441947,0.0012998835,0.000085535474,0.0001470852,0.000007465873,0.000104323655,0.00085128896,0.0076008234],"category_scores_gemma":[0.0016412543,0.00014474636,0.0003045978,0.00032206904,0.00096765603,0.000037570462,0.00009306023,0.00055252947,0.00042611762],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025337187,0.0005946239,0.014246672,0.02292609,0.000541529,0.00014026811,0.00022585335,1.1472292e-7,0.00016962562,0.0015959548,0.11381992,0.845486],"study_design_scores_gemma":[0.0003312054,0.0005507642,0.005164022,0.002050467,0.00083962345,0.00017821512,0.000004351082,0.0000072379803,0.000041729672,0.000055920525,0.9906594,0.00011707239],"about_ca_topic_score_codex":0.0001193432,"about_ca_topic_score_gemma":0.0016710812,"teacher_disagreement_score":0.87683946,"about_ca_system_score_codex":0.00019413696,"about_ca_system_score_gemma":0.0010143481,"threshold_uncertainty_score":0.99330634},"labels":[],"label_agreement":null},{"id":"W2921824031","doi":"10.1093/jcag/gwz006.164","title":"A165 INVASIVE GASTRIC MUCORMYCOSIS - CASE REPORT OF A RARE CAUSE OF UPPER GASTROINTESTINAL BLEEDING","year":2019,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Sault Area Hospital; University of Toronto","funders":"","keywords":"Mucormycosis; Medicine; Upper gastrointestinal bleeding; Gastrointestinal bleeding; Multiple myeloma; Thrombosis; Surgery; Internal medicine; Gastroenterology; Endoscopy","score_opus":0.013474711719785017,"score_gpt":0.24599561800797873,"score_spread":0.23252090628819372,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921824031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996904,0.000016360133,0.00003159645,0.0023230612,0.00024366227,0.00019225567,0.000056910045,0.0000016978636,0.00023043208],"genre_scores_gemma":[0.9984611,0.000009602901,0.0007312985,0.00024854048,0.000064566804,7.4479954e-7,0.000003716212,0.000011063916,0.0004693608],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978522,0.00018414577,0.0010735751,0.00012774995,0.0004404434,0.0003218634],"domain_scores_gemma":[0.99514055,0.00018203848,0.0028422403,0.00027351745,0.0013326979,0.00022894074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012181767,0.00012000348,0.0006762096,0.00034923392,0.000044751123,0.000004910528,0.00016895865,0.00009338415,0.00015750914],"category_scores_gemma":[0.00239118,0.00009308783,0.0003738057,0.00020606052,0.000089533474,0.000094118186,0.00003295849,0.00036756438,0.0000016661365],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005575224,0.00007279104,0.9890532,0.000106480766,0.00024077312,0.001835105,0.00014833952,0.000028305716,0.006264204,0.000011842404,0.0016656229,0.000015811338],"study_design_scores_gemma":[0.0016631784,0.0017537972,0.9500925,0.00044110458,0.00031366074,0.044192996,0.00059183856,0.00002110165,0.0008309047,0.000025218857,0.000035113222,0.000038587143],"about_ca_topic_score_codex":0.0048027793,"about_ca_topic_score_gemma":0.110122725,"teacher_disagreement_score":0.10531995,"about_ca_system_score_codex":0.000923828,"about_ca_system_score_gemma":0.0011240161,"threshold_uncertainty_score":0.90611523},"labels":[],"label_agreement":null},{"id":"W2922055019","doi":"10.1128/mbio.00346-19","title":"Erratum for Kim et al., “Genetic Analysis of Candida auris Implicates Hsp90 in Morphogenesis and Azole Tolerance and Cdr1 in Azole Resistance”","year":2019,"lang":"en","type":"erratum","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Azole; Candida auris; Biology; Microbiology; Antifungal","score_opus":0.012847599634910825,"score_gpt":0.29190861285062064,"score_spread":0.2790610132157098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2922055019","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95960456,0.033009738,0.000051451,0.0017465164,0.0007032671,0.0012305919,0.0007069079,0.000020421337,0.0029265608],"genre_scores_gemma":[0.9345836,0.008615938,0.0005920907,0.0013636166,0.000081446575,0.00014183395,0.00071112375,0.00007122175,0.053839136],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99735945,0.000064643784,0.0008055732,0.000961804,0.00032680773,0.00048172972],"domain_scores_gemma":[0.9984446,0.00018086638,0.00030070284,0.000778111,0.00015509484,0.0001406136],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005034684,0.00040882526,0.0017054458,0.0006638247,0.000046495537,0.000030489851,0.00016694405,0.00044681205,0.000040405735],"category_scores_gemma":[0.00015968457,0.00038478413,0.00024072283,0.00095664547,0.00019620614,0.00006551625,0.000080246566,0.00048627492,0.0000019427075],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009787305,0.00018123043,0.662127,0.0017666732,0.00044330818,0.000030089757,0.00043822048,0.000016159565,0.004850032,0.00003368332,0.3284737,0.00066119066],"study_design_scores_gemma":[0.0014799485,0.00014178333,0.9359266,0.00069268054,0.00078179187,0.000002106258,0.00018698805,0.0005224537,0.00035686718,0.00012066345,0.059419278,0.00036882263],"about_ca_topic_score_codex":0.0016290015,"about_ca_topic_score_gemma":0.038035605,"teacher_disagreement_score":0.2737996,"about_ca_system_score_codex":0.00014363784,"about_ca_system_score_gemma":0.00036575634,"threshold_uncertainty_score":0.9998604},"labels":[],"label_agreement":null},{"id":"W2922244516","doi":"10.1371/journal.pbio.2006966","title":"Environment-induced same-sex mating in the yeast Candida albicans through the Hsf1–Hsp90 pathway","year":2019,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Natural Science Foundation of China","keywords":"Biology; Mating of yeast; Schizosaccharomyces pombe; Mating type; Candida albicans; Saccharomyces cerevisiae; Mating; Schizosaccharomyces; Homothallism; Heterothallic; Sexual reproduction; Genetics; Cell biology; Yeast; Gene","score_opus":0.033362797068113875,"score_gpt":0.2720032780001884,"score_spread":0.23864048093207454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2922244516","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9854488,0.00014848627,0.000018791636,0.00251317,0.00007041834,0.00055007945,0.000017941964,0.00001656329,0.011215782],"genre_scores_gemma":[0.9966455,0.00004734465,0.00008161812,0.0020708265,0.000112668014,0.000032386542,0.000025880938,0.000011458014,0.0009723234],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987993,0.0002191593,0.00023497514,0.00029229885,0.0001397908,0.0003144274],"domain_scores_gemma":[0.9990901,0.00024311362,0.00007097101,0.00055503234,0.000011271315,0.000029555107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033139164,0.00013010735,0.00026795917,0.000018804354,0.00007113464,0.000008417852,0.00021092754,0.00012125343,0.00068304676],"category_scores_gemma":[0.00011958701,0.000064394524,0.000070322356,0.00008751626,0.00013743389,0.000032531905,0.000053100674,0.0003391997,0.00034424252],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015736083,0.00029813725,0.6642568,0.00006728357,0.00008019924,0.000020795875,0.008151373,0.0000019205718,0.31867778,0.0019521359,0.00024494182,0.0060912455],"study_design_scores_gemma":[0.0040512886,0.0019723452,0.87211466,0.0002614295,0.0001784869,0.000069133486,0.033944678,0.0005906742,0.027272757,0.0073612644,0.051462736,0.0007205519],"about_ca_topic_score_codex":0.000590153,"about_ca_topic_score_gemma":0.00031260474,"teacher_disagreement_score":0.29140502,"about_ca_system_score_codex":0.00006278624,"about_ca_system_score_gemma":0.00005881876,"threshold_uncertainty_score":0.7478883},"labels":[],"label_agreement":null},{"id":"W2922249289","doi":"10.1016/j.tcsw.2019.100023","title":"Assembly and disassembly of <i>Aspergillus fumigatus</i> conidial rodlets.","year":2019,"lang":"en","type":"paratext","venue":"PubMed","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Agence Nationale de la Recherche","keywords":"Conidium; Aspergillus fumigatus; Microbiology; Mutant; Biology; Chemistry; Biochemistry; Botany; Gene","score_opus":0.01974889819992998,"score_gpt":0.25030650238085056,"score_spread":0.23055760418092058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2922249289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5314529,0.013630346,0.00006166239,0.00067674124,0.003556695,0.0034559711,0.0005318827,0.00005060659,0.44658318],"genre_scores_gemma":[0.749383,0.0018205863,0.000031144402,0.00035213804,0.00043768293,0.00023324636,0.00025839207,0.000057552777,0.24742629],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.997303,0.000087429245,0.00063454034,0.00074131426,0.00056873553,0.00066494395],"domain_scores_gemma":[0.99810946,0.00019770565,0.0003278219,0.00078746415,0.00022984634,0.00034767954],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004664852,0.00043446748,0.0014032885,0.00013769169,0.00005277658,0.00003353239,0.00018366711,0.0006123436,0.00027794857],"category_scores_gemma":[0.00028834038,0.00036390798,0.00029981218,0.00019943982,0.0002963265,0.00009488334,0.0001290124,0.00051296485,0.0006023677],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00346236,0.00078508013,0.034870937,0.008118269,0.0011388342,0.000087736364,0.00029123144,0.0000048937177,0.007734518,0.0004411472,0.8065074,0.13655758],"study_design_scores_gemma":[0.0029703614,0.00026086468,0.43844402,0.0003712695,0.0005160779,0.000031614156,0.0001317145,0.0000053497956,0.00740159,0.000023649436,0.5491552,0.00068831205],"about_ca_topic_score_codex":0.0001025622,"about_ca_topic_score_gemma":0.000045107103,"teacher_disagreement_score":0.4035731,"about_ca_system_score_codex":0.00012758146,"about_ca_system_score_gemma":0.00031019902,"threshold_uncertainty_score":0.99988127},"labels":[],"label_agreement":null},{"id":"W2922800780","doi":"10.1371/journal.pone.0212837","title":"A non-randomized trial to assess the safety, tolerability, and pharmacokinetics of posaconazole oral suspension in immunocompromised children with neutropenia","year":2019,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Allergan; Astellas Pharma; Gilead Sciences; Merck","keywords":"Tolerability; Medicine; Neutropenia; Posaconazole; Pharmacokinetics; Dosing; Adverse effect; Internal medicine; Toxicity; Antifungal; Itraconazole","score_opus":0.03506177710433145,"score_gpt":0.28209142191486203,"score_spread":0.24702964481053058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2922800780","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922095,0.0001257029,0.000013614499,0.0007128151,0.000024426843,0.0063419244,0.000008562251,0.000012859709,0.00055059616],"genre_scores_gemma":[0.9986349,0.00010490648,0.00073884125,0.00020751021,0.000039391754,0.000046700487,0.000015495792,0.000017172135,0.0001951088],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.998433,0.00017450313,0.0004840689,0.00030372242,0.0003970838,0.00020764518],"domain_scores_gemma":[0.9989508,0.00026447268,0.000112152455,0.0004288445,0.00015855109,0.00008518059],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009639393,0.00015823262,0.001049636,0.000059078575,0.000033740376,0.000015580312,0.00012846645,0.000057146477,0.00014964135],"category_scores_gemma":[0.00012579314,0.00009298146,0.000076329234,0.0001960577,0.00018262205,0.000059022423,0.00009617596,0.00025016288,0.000012241546],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.66124845,0.0014667477,0.16281101,0.00010389031,0.00023032658,0.0000023290613,0.00026923607,0.000005937185,0.17357849,0.00002185957,0.0000078113035,0.00025392484],"study_design_scores_gemma":[0.58084416,0.0011409745,0.38444212,0.00032103914,0.00036336094,0.0000023734588,0.00007886624,0.0004949799,0.03215741,0.000025160642,0.0000042078536,0.00012535365],"about_ca_topic_score_codex":0.00015211695,"about_ca_topic_score_gemma":0.00008903184,"teacher_disagreement_score":0.22163112,"about_ca_system_score_codex":0.000038833325,"about_ca_system_score_gemma":0.00010349425,"threshold_uncertainty_score":0.3791674},"labels":[],"label_agreement":null},{"id":"W2923421859","doi":"10.1016/j.mmcr.2019.03.004","title":"Chronic Candida dubliniensis meningitis in a lung transplant recipient","year":2019,"lang":"en","type":"article","venue":"Medical Mycology Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Candida dubliniensis; Medicine; Lung; Meningitis; Candida albicans; Esophageal candidiasis; Microbiology; Immunology; Internal medicine; Antifungal; Dermatology; Biology; Surgery; Human immunodeficiency virus (HIV); Corpus albicans","score_opus":0.008229706271453514,"score_gpt":0.2837234797510074,"score_spread":0.2754937734795539,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2923421859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913657,0.0013020469,0.000062027815,0.0017046318,0.0008353192,0.0006496793,0.000005211075,0.00005694195,0.0040184604],"genre_scores_gemma":[0.9979545,0.0002297619,0.0000642027,0.00045842014,0.0001918475,0.000044868433,0.000038143215,0.000019031599,0.0009992475],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99725515,0.00011789226,0.0008257968,0.0006339698,0.0006136168,0.0005535533],"domain_scores_gemma":[0.9985294,0.00027180853,0.00014070938,0.0005196337,0.000077767,0.00046068704],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013660726,0.00018708195,0.0006763066,0.00017072362,0.000052553358,0.000006565213,0.00004234291,0.00041834023,0.005891463],"category_scores_gemma":[0.00077983434,0.00015160465,0.00014988221,0.00029786886,0.00018506606,0.000051165753,0.000039249288,0.0006203499,0.000050830346],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014139121,0.00011954387,0.49503902,0.0001763716,0.00004170859,0.5006866,0.00021309708,0.000001700896,0.0005953497,0.000030570824,0.00085092813,0.002103762],"study_design_scores_gemma":[0.0037482975,0.0011688417,0.4417097,0.0009915716,0.00021501858,0.53620017,0.00023650858,0.0013074169,0.00077092747,0.00008879478,0.013158976,0.00040382103],"about_ca_topic_score_codex":0.00069986307,"about_ca_topic_score_gemma":0.0033467426,"teacher_disagreement_score":0.053329334,"about_ca_system_score_codex":0.00048564348,"about_ca_system_score_gemma":0.0012043419,"threshold_uncertainty_score":0.9950173},"labels":[],"label_agreement":null},{"id":"W2923562511","doi":"10.1128/jcm.00404-19","title":"Triazole Antifungal Susceptibility Patterns among <i>Aspergillus</i> Species in Québec, Canada","year":2019,"lang":"en","type":"letter","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de Santé Publique du Québec; Institute of Infection and Immunity; McGill University","funders":"Fonds de Recherche du Québec - Santé; Gilead Sciences","keywords":"Aspergillosis; Aspergillus; Antifungal; Fungi imperfecti; Mortality rate; Biology; Mycosis; Microbiology; Medicine; Internal medicine; Immunology","score_opus":0.03757999891162578,"score_gpt":0.3159763533084433,"score_spread":0.27839635439681754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2923562511","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.81034166,0.0008101986,0.000012814329,0.18376037,0.003711864,0.00044512984,0.00029651693,0.000009109406,0.0006123693],"genre_scores_gemma":[0.7124427,0.0007486891,0.000052991414,0.27306035,0.005806759,0.0000015582472,0.00020622376,0.00005680766,0.007623925],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9924067,0.0010921363,0.0046326313,0.0007584452,0.000331261,0.0007788289],"domain_scores_gemma":[0.9928523,0.0031348662,0.002267172,0.00089651416,0.000652364,0.0001968323],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.002846597,0.00053355773,0.0038489797,0.00022073962,0.00004447218,0.000021106365,0.0006124878,0.002028714,0.0015659648],"category_scores_gemma":[0.0032692016,0.0003923117,0.0012958394,0.00018066005,0.0006140475,0.00009789657,0.00013632137,0.0078968415,0.00003566723],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00073166745,0.00013963446,0.5203421,0.00022765005,0.00016370161,0.0013399789,0.000010687129,9.2240055e-7,0.0011426703,3.2167617e-7,0.4756836,0.00021701436],"study_design_scores_gemma":[0.002420713,0.00062870194,0.45167458,0.00041988638,0.00015538484,0.00020571916,0.000055409433,0.0000013432947,0.000119871824,0.0000044829676,0.5440743,0.0002395895],"about_ca_topic_score_codex":0.18899645,"about_ca_topic_score_gemma":0.8803078,"teacher_disagreement_score":0.6913113,"about_ca_system_score_codex":0.0007871451,"about_ca_system_score_gemma":0.008110859,"threshold_uncertainty_score":0.9998529},"labels":[],"label_agreement":null},{"id":"W2924814601","doi":"10.1111/ctr.13544","title":"Invasive Aspergillosis in solid‐organ transplant recipients: Guidelines from the American Society of Transplantation Infectious Diseases Community of Practice","year":2019,"lang":"en","type":"article","venue":"Clinical Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":290,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"American Society of Transplantation","keywords":"Medicine; Voriconazole; Aspergillosis; Galactomannan; Lung transplantation; Transplantation; Intensive care medicine; Organ transplantation; Internal medicine; Zygomycosis; Lung; Cryptococcosis; Liver transplantation; Amphotericin B; Immunology; Antifungal; Dermatology","score_opus":0.07142370508651454,"score_gpt":0.414657421852869,"score_spread":0.3432337167663545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2924814601","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954139,0.00014032534,0.0018232341,0.0009802692,0.00014474336,0.0005842597,0.0006229835,0.000027388398,0.00026291446],"genre_scores_gemma":[0.97939086,0.01740336,0.0010951875,0.0013607371,0.00006521243,0.000011042634,0.0006388274,0.00001745206,0.000017315],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996906,0.000867573,0.0013554358,0.000288702,0.00040526778,0.00017701212],"domain_scores_gemma":[0.9925646,0.005910591,0.0005631169,0.0004430652,0.0004335417,0.00008508186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001206317,0.00017834941,0.0007168433,0.00004934672,0.00007514941,0.000007439894,0.0001728787,0.00012429441,0.000041740386],"category_scores_gemma":[0.0006486779,0.00013142281,0.00038673583,0.00041639732,0.00043922238,0.00022163225,0.0000073441392,0.00052851957,0.000008520468],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040212492,0.00075061683,0.97661173,0.00047140004,0.00020642318,0.000008749106,0.003889273,0.00006434369,0.010460602,0.000036117206,0.000055193334,0.0034243271],"study_design_scores_gemma":[0.0031069217,0.0007658409,0.9867936,0.0010814887,0.00082718953,0.00000927271,0.002265568,0.00010073882,0.004647586,0.0002514995,0.000023727314,0.00012660574],"about_ca_topic_score_codex":0.0024740384,"about_ca_topic_score_gemma":0.00161602,"teacher_disagreement_score":0.017263034,"about_ca_system_score_codex":0.000042116542,"about_ca_system_score_gemma":0.00018943287,"threshold_uncertainty_score":0.5359267},"labels":[],"label_agreement":null},{"id":"W2930139255","doi":"10.1186/s12879-019-3822-9","title":"Severe facial necrosis in a type 1 diabetic patient secondary to mucormycosis masquerading as an internal maxillary artery occlusion: a case report","year":2019,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary; Alberta Health Services","funders":"","keywords":"Mucormycosis; Medicine; Surgery; Complication; Sinusitis; Mycosis","score_opus":0.009918858207895996,"score_gpt":0.26545648895615875,"score_spread":0.25553763074826275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2930139255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954416,0.00021851363,0.000026867103,0.000035768604,0.0005583453,0.00087199296,0.000051511823,0.000121194935,0.002674197],"genre_scores_gemma":[0.99826974,0.000016215843,0.000067116795,0.0009503889,0.00011125583,0.000036673657,0.00006534886,0.000033448272,0.00044980537],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99814993,0.00010095651,0.00046965238,0.0005946432,0.00031354665,0.00037124692],"domain_scores_gemma":[0.99864566,0.00008455352,0.00010622307,0.0005675425,0.00015242897,0.00044359063],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00014881125,0.00024642053,0.0004306673,0.00022051159,0.0001166107,0.000059779723,0.00006778741,0.00010833141,0.0013671182],"category_scores_gemma":[0.00041886725,0.00022771377,0.00017846777,0.00034438426,0.00004253525,0.00024089601,0.00012122306,0.00023168097,0.00024784874],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009859642,0.00057888584,0.9581829,0.00023382902,0.000036548383,0.033181075,0.000565244,0.000029479033,0.0005892305,0.0000074097798,0.00029850763,0.00531097],"study_design_scores_gemma":[0.0016045831,0.001959466,0.9641715,0.0003429341,0.000120223965,0.029386058,0.0007759428,0.00017072994,0.00023849693,0.00021570057,0.00060656015,0.00040780075],"about_ca_topic_score_codex":0.0006912662,"about_ca_topic_score_gemma":0.0014108282,"teacher_disagreement_score":0.0059886463,"about_ca_system_score_codex":0.00034197155,"about_ca_system_score_gemma":0.00046254497,"threshold_uncertainty_score":0.99954575},"labels":[],"label_agreement":null},{"id":"W2937696062","doi":"10.6002/ect.2018.0185","title":"Atypical Presentation of Aspergillus Mediastinitis Infection in a Heart Transplant Patient: the Importance of Combined Medical and Surgical Treatment","year":2019,"lang":"en","type":"article","venue":"Experimental and Clinical Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Mediastinitis; Medicine; Aspergillosis; Aspergillus; Surgery; Aspergillus fumigatus; Antifungal; Presentation (obstetrics); Heart transplantation; Immunosuppression; Intensive care medicine; Internal medicine; Transplantation; Dermatology; Immunology; Microbiology; Biology","score_opus":0.025228476135107047,"score_gpt":0.3492903120464481,"score_spread":0.3240618359113411,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2937696062","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99835,0.0005102097,0.000018254825,0.0002923829,0.000084797575,0.00048976473,0.00001962058,0.0000074679974,0.0002274833],"genre_scores_gemma":[0.9970413,0.0027269288,0.000057627934,0.00005850652,0.000023464345,0.000015109072,0.00005955364,0.0000054837014,0.000012068641],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986127,0.00014381822,0.0006270701,0.00022063577,0.00029280587,0.00010299006],"domain_scores_gemma":[0.99924624,0.0004538465,0.000085509804,0.000094634815,0.000024474759,0.000095273055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002576796,0.000100992314,0.00035907034,0.0000332657,0.000023251665,0.0000031713557,0.000021793852,0.00011840629,0.00015314987],"category_scores_gemma":[0.00002576724,0.000064733664,0.00009549341,0.00008522052,0.0002525124,0.00006183096,0.000005852063,0.00012111352,0.0000014447603],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005225296,0.0007519838,0.98808134,0.0001228855,0.000034071087,0.000037919082,0.0011170533,6.066809e-7,0.0023536212,0.0002572421,0.0000017777793,0.0020162137],"study_design_scores_gemma":[0.0054777386,0.0029567631,0.97927576,0.00021346293,0.000056211822,0.00009117988,0.00033975617,0.00029482774,0.011170858,0.000033008844,0.000028586173,0.00006181534],"about_ca_topic_score_codex":0.00016974051,"about_ca_topic_score_gemma":0.00021926156,"teacher_disagreement_score":0.008817237,"about_ca_system_score_codex":0.000017795199,"about_ca_system_score_gemma":0.000044074517,"threshold_uncertainty_score":0.26397622},"labels":[],"label_agreement":null},{"id":"W2937797957","doi":"10.1503/cmaj.181210","title":"Rhino-orbital-cerebral mucormycosis","year":2019,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Mucormycosis; Medicine; Presentation (obstetrics); Emergency department; Chemotherapy; Diabetes mellitus; Pediatrics; Type 2 Diabetes Mellitus; Surgery; Endocrinology; Psychiatry","score_opus":0.006288992832936338,"score_gpt":0.23559641694461056,"score_spread":0.2293074241116742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2937797957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9466241,0.00016796868,0.00002361568,0.020395309,0.0008514414,0.00013976323,0.000012346837,0.00002091847,0.03176452],"genre_scores_gemma":[0.9800148,0.000046317076,0.00009273128,0.010902985,0.0009115686,0.0000016254985,0.000008992743,0.000014457133,0.008006508],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973711,0.000081827515,0.00039967406,0.00017902243,0.001448025,0.00052039797],"domain_scores_gemma":[0.9972342,0.00010494088,0.00013774236,0.00015980522,0.00036941023,0.0019938466],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.001362783,0.000112546935,0.00029532512,0.00013350979,0.00014832288,0.00005728641,0.00013187375,0.00037208747,0.027468761],"category_scores_gemma":[0.0016427559,0.000095537835,0.00018539169,0.00020154589,0.00002817679,0.00014036924,0.00001123883,0.0010219467,0.0022328512],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023681068,0.000029261253,0.905863,0.000014917752,0.00007476974,0.0002994571,0.00008897779,3.1909036e-7,0.000044344135,0.00020011711,0.08597835,0.007382811],"study_design_scores_gemma":[0.0014999209,0.00013789389,0.7921783,0.000116198105,0.000039953542,0.00055262074,0.0004508493,0.00015985048,0.00004379292,0.00014935459,0.20451662,0.00015467257],"about_ca_topic_score_codex":0.001660175,"about_ca_topic_score_gemma":0.014003862,"teacher_disagreement_score":0.118538275,"about_ca_system_score_codex":0.0013416477,"about_ca_system_score_gemma":0.0034506486,"threshold_uncertainty_score":0.99854404},"labels":[],"label_agreement":null},{"id":"W2938571768","doi":"10.1038/s41596-019-0157-3","title":"Author Correction: Design, execution, and analysis of CRISPR–Cas9-based deletions and genetic interaction networks in the fungal pathogen Candida albicans","year":2019,"lang":"en","type":"erratum","venue":"Nature Protocols","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"CRISPR; Candida albicans; Genome editing; Computational biology; Locus (genetics); Cas9; Genetics; Biology; Sentence; Computer science; Genome; Gene; Artificial intelligence","score_opus":0.02417847305317495,"score_gpt":0.35144949995929053,"score_spread":0.3272710269061156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2938571768","genre_codex":"protocol","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02313362,0.020435136,0.28257588,0.0069235624,0.015544315,0.6421567,0.0011157024,0.00029843635,0.007816627],"genre_scores_gemma":[0.896793,0.00027948403,0.0018022464,0.001718555,0.0012029302,0.07316323,0.0014458589,0.00009872359,0.02349593],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9975854,0.00048062595,0.00057518,0.00060552085,0.00047740852,0.00027584963],"domain_scores_gemma":[0.99815154,0.00039614504,0.0003675603,0.0006137308,0.00037475032,0.00009624894],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0007531946,0.00032763678,0.0008528908,0.0004731839,0.00012835885,0.000060033475,0.0001448805,0.0012277202,0.00008798395],"category_scores_gemma":[0.00041774946,0.00023352102,0.00021861617,0.0011431184,0.00015554854,0.000061936735,0.000031390733,0.0024779816,0.0000010086052],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0041103642,0.00068202964,0.37053,0.0018306263,0.0012869444,0.00015589356,0.0008508868,0.0019062408,0.00060600205,0.00004745317,0.60967755,0.008316002],"study_design_scores_gemma":[0.0013283617,0.0010126391,0.8363915,0.0017098676,0.0028955743,0.00006292658,0.00037927504,0.06361174,0.000068333764,0.000029682025,0.09209798,0.0004121014],"about_ca_topic_score_codex":0.00017287211,"about_ca_topic_score_gemma":0.0017598708,"teacher_disagreement_score":0.87365943,"about_ca_system_score_codex":0.00016521683,"about_ca_system_score_gemma":0.00048078285,"threshold_uncertainty_score":0.99982333},"labels":[],"label_agreement":null},{"id":"W2942204395","doi":"10.3389/fmicb.2019.00900","title":"Analyses of the Global Multilocus Genotypes of the Human Pathogenic Yeast Candida tropicalis","year":2019,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Natural Science Foundation of Hainan Province; National Natural Science Foundation of China","keywords":"Biology; Geographical distance; Genetic variation; Genetic diversity; Mantel test; Analysis of molecular variance; Genetics; Population; Genetic distance; Locus (genetics); Genotype; Gene flow; Evolutionary biology; Gene; Demography","score_opus":0.013436715380392976,"score_gpt":0.2884168048709724,"score_spread":0.2749800894905794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2942204395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974429,0.0011018844,0.00008307382,0.00011761837,0.0004362124,0.00028140872,0.0001302955,0.0000036729175,0.00040294067],"genre_scores_gemma":[0.99902594,0.000018324263,0.00041670562,0.00011477363,0.000018393644,0.0000016087407,0.000009420243,0.000004574609,0.00039025076],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991575,0.00014828677,0.00028620998,0.00018456664,0.0000551009,0.00016835879],"domain_scores_gemma":[0.99930865,0.000013509153,0.00013011886,0.00047404092,0.000053955166,0.000019701838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000106245425,0.00009097871,0.0003746184,0.000026789201,0.000028950282,0.0000012750955,0.00023907959,0.00012031419,0.00006431149],"category_scores_gemma":[0.000068338224,0.00004763842,0.00020011338,0.00021025802,0.0003903784,0.0000107766255,0.000078856654,0.00013391173,0.000003021977],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062881336,0.000034599012,0.561245,0.000028183804,0.00003781736,4.6762514e-7,0.000046687175,0.0000030853046,0.43781573,0.000032377127,0.00056091504,0.00013225785],"study_design_scores_gemma":[0.000703827,0.00006978054,0.9393828,0.00005248411,0.000072187286,0.000005100638,0.00022950889,0.000008775649,0.05837228,0.00015485926,0.0008969559,0.00005144261],"about_ca_topic_score_codex":0.00039420798,"about_ca_topic_score_gemma":0.00066623365,"teacher_disagreement_score":0.37944344,"about_ca_system_score_codex":0.00009959069,"about_ca_system_score_gemma":0.0000960929,"threshold_uncertainty_score":0.19426383},"labels":[],"label_agreement":null},{"id":"W2943679160","doi":"","title":"Bruton's Tyrosine Kinase (BTK) and Vav1 Contribute to Dectin1-Dependent Phagocytosis of Candida albicans in Macrophages","year":2013,"lang":"en","type":"book-chapter","venue":"DSpace@MIT (Massachusetts Institute of Technology)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Bruton's tyrosine kinase; Phagocytosis; Phagosome; Candida albicans; Microbiology; Biology; Immune system; Tyrosine kinase; Corpus albicans; Innate immune system; Cell biology; Immunology; Signal transduction","score_opus":0.01267439076220816,"score_gpt":0.25530711073868734,"score_spread":0.24263271997647917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2943679160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92359775,0.014637538,0.00035376754,0.014191996,0.00069327885,0.0040971437,0.0016674127,0.00037461636,0.040386505],"genre_scores_gemma":[0.9370406,0.0023333943,0.0029348703,0.00034384948,0.000074465665,0.000084577616,0.00007936434,0.000105740575,0.057003107],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963125,0.000017492235,0.0011631441,0.0011148974,0.00069402484,0.0006979444],"domain_scores_gemma":[0.9969483,0.00007706575,0.0006633385,0.0014441459,0.0005463925,0.00032075273],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00035914057,0.0007868212,0.0022176832,0.0017026236,0.00009933839,0.000020959844,0.00046029562,0.0014886826,0.0003675791],"category_scores_gemma":[0.0006533323,0.0007348065,0.00029052977,0.0004391631,0.0013065567,0.00017352463,0.0004199944,0.0011482243,0.000042337917],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0062224995,0.002699854,0.41717964,0.00925005,0.005733555,0.0058347112,0.0011343309,0.000060200822,0.24954876,0.12383098,0.037889898,0.14061552],"study_design_scores_gemma":[0.01674791,0.0048509343,0.081293054,0.01151327,0.0028290153,0.00035735167,0.00043811262,0.000048099042,0.2071273,0.006989046,0.6642691,0.003536828],"about_ca_topic_score_codex":0.0007115986,"about_ca_topic_score_gemma":0.0041325763,"teacher_disagreement_score":0.6263792,"about_ca_system_score_codex":0.00045627463,"about_ca_system_score_gemma":0.00039177004,"threshold_uncertainty_score":0.9998076},"labels":[],"label_agreement":null},{"id":"W2944152825","doi":"10.1101/631960","title":"A novel genetic circuitry governing hypoxic metabolic flexibility, commensalism and virulence in the fungal pathogen <i>Candida albicans</i>","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Research Council Canada; Centre Hospitalier Universitaire Vaudois; Medizinische Universität Wien; Universität Wien; Carnegie Mellon University","keywords":"Biology; Candida albicans; Mutant; Corpus albicans; Cell biology; Phenotype; Genetic screen; Microbiology; Gene; Genetics","score_opus":0.022601701313333854,"score_gpt":0.24560195993781156,"score_spread":0.2230002586244777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944152825","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9857769,0.009493721,0.0011263646,0.00048780473,0.00046048066,0.0017822206,0.0006899663,0.00013160701,0.00005092014],"genre_scores_gemma":[0.9942846,0.0011942631,0.0015721906,0.0022994499,0.00035262285,0.00017020972,0.000001298543,0.00011263429,0.000012761347],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9954628,0.0003537423,0.00087584835,0.0015834082,0.0008985455,0.00082567474],"domain_scores_gemma":[0.99619734,0.00031266903,0.0004236329,0.0024643224,0.00029508842,0.00030695507],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018720814,0.0007350007,0.0012190321,0.00019559296,0.00017658884,0.00019835161,0.00069541385,0.0006306509,0.000057275145],"category_scores_gemma":[0.000548149,0.00061664585,0.00025799696,0.0005718446,0.00037269676,0.00013405205,0.00056365476,0.0017591879,0.00004864721],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014578912,0.00039128773,0.42422676,0.0010869259,0.00014242253,0.0001618659,0.00010676038,0.000026833848,0.57334065,0.0002474138,0.00010063689,0.000022673818],"study_design_scores_gemma":[0.001343258,0.00009225233,0.98751795,0.0006904635,0.0003518168,6.084961e-7,0.000038644917,0.00041484117,0.0058288854,0.000006175332,0.0030626792,0.0006524474],"about_ca_topic_score_codex":0.0004690787,"about_ca_topic_score_gemma":0.000064692365,"teacher_disagreement_score":0.56751174,"about_ca_system_score_codex":0.00028332527,"about_ca_system_score_gemma":0.0010351617,"threshold_uncertainty_score":0.9996285},"labels":[],"label_agreement":null},{"id":"W2945371590","doi":"10.1177/1040638719852981","title":"Fatal <i>Aspergillus flavus</i> rhinitis with gastrointestinal gaseous distension in a Cape porcupine","year":2019,"lang":"en","type":"article","venue":"Journal of Veterinary Diagnostic Investigation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Cégep de Sherbrooke","funders":"","keywords":"Lethargy; Medicine; Porcupine; Abdominal distension; Physical examination; Distension; Gastroenterology; Internal medicine; Biology","score_opus":0.018146228782205804,"score_gpt":0.25332137118514964,"score_spread":0.23517514240294382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945371590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979758,0.00019642501,0.00022417928,0.0007624171,0.00015757194,0.00034603832,0.000009939441,0.000015099157,0.00031247764],"genre_scores_gemma":[0.9953619,0.00006277448,0.0038258214,0.00042030733,0.00014440194,0.0000039423867,0.000041254745,0.000023375957,0.00011621201],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982728,0.00009889909,0.0006425257,0.00022569583,0.0004958474,0.00026426598],"domain_scores_gemma":[0.9983231,0.0004897161,0.00037688826,0.00023143699,0.00034189766,0.00023699299],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040687542,0.00019591949,0.0004601453,0.0001873537,0.000040610317,0.000022556422,0.00009048927,0.000058041387,0.000107749904],"category_scores_gemma":[0.0014116259,0.00014830088,0.00010216743,0.00025461987,0.00015739325,0.00031902068,0.000029930905,0.00041426427,0.00003548499],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024967098,0.00027553661,0.8760045,0.0003356682,0.000026046107,0.010235151,0.00038329815,0.0001906466,0.108754165,0.000055884986,0.00040319818,0.00083916547],"study_design_scores_gemma":[0.003275405,0.01298526,0.9488471,0.0045199366,0.000088244014,0.027202396,0.00046513416,0.00042898036,0.0016686072,0.00014786395,0.00017590952,0.00019515597],"about_ca_topic_score_codex":0.00005279639,"about_ca_topic_score_gemma":0.000029569383,"teacher_disagreement_score":0.107085556,"about_ca_system_score_codex":0.00018271715,"about_ca_system_score_gemma":0.00032097645,"threshold_uncertainty_score":0.6047535},"labels":[],"label_agreement":null},{"id":"W2945601044","doi":"10.1097/mph.0000000000001508","title":"Isavuconazole Treatment of Cerebral and Pulmonary Aspergillosis in a Pediatric Patient With Acute Lymphoblastic Leukemia: Case Report and Review of Literature","year":2019,"lang":"en","type":"article","venue":"Journal of Pediatric Hematology/Oncology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Medicine; Voriconazole; Aspergillosis; Lymphoblastic Leukemia; Chemotherapy; Pulmonary aspergillosis; Leukemia; Pediatrics; Internal medicine; Intensive care medicine; Antifungal; Dermatology; Immunology","score_opus":0.008937497810612385,"score_gpt":0.27858661130047035,"score_spread":0.269649113489858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945601044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90102017,0.09760345,0.00000564771,0.00043149522,0.00010861059,0.0004439536,0.000012513823,0.0000035225914,0.00037060847],"genre_scores_gemma":[0.89709353,0.101815954,0.0007960889,0.00010686769,0.000111509464,0.000007125816,0.0000057644293,0.000012810399,0.000050349332],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99760044,0.00016776226,0.0014327373,0.00029560243,0.00025355592,0.00024990347],"domain_scores_gemma":[0.9973362,0.00042228718,0.0013834528,0.0002527151,0.00041196204,0.00019339853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046066937,0.00022623244,0.0016668559,0.00038193454,0.00002275166,0.0000033464696,0.00005436058,0.00029514244,0.00003334952],"category_scores_gemma":[0.00021799022,0.00014627408,0.00015941907,0.00048472008,0.00011796962,0.00011602866,0.000040574254,0.00027703602,0.0000010814042],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013059141,0.0007108223,0.8127575,0.005441309,0.00014443167,0.1772855,0.0004605881,9.773372e-7,0.0001021985,0.000030208095,0.00018647118,0.0015740815],"study_design_scores_gemma":[0.0058912197,0.013827248,0.12825766,0.001337588,0.0030113922,0.84613776,0.00059180777,0.000035016896,0.00024272884,0.00006554156,0.0003768409,0.00022518939],"about_ca_topic_score_codex":0.000024302919,"about_ca_topic_score_gemma":0.000027733013,"teacher_disagreement_score":0.6844998,"about_ca_system_score_codex":0.0003867716,"about_ca_system_score_gemma":0.0014395257,"threshold_uncertainty_score":0.59648836},"labels":[],"label_agreement":null},{"id":"W2945839580","doi":"10.1002/psp4.12414","title":"Physiologically‐Based Pharmacokinetic Modeling of Fluconazole Using Plasma and Cerebrospinal Fluid Samples From Preterm and Term Infants","year":2019,"lang":"en","type":"article","venue":"CPT Pharmacometrics & Systems Pharmacology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; National Institute of Child Health and Human Development; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Pharmacokinetics; Cerebrospinal fluid; Dosing; Fluconazole; Medicine; Physiologically based pharmacokinetic modelling; Plasma concentration; Pharmacology; Internal medicine; Antifungal","score_opus":0.05298117718930536,"score_gpt":0.3324642961910152,"score_spread":0.27948311900170986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945839580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98759377,0.008199578,0.0010978776,0.000048849368,0.0011164426,0.0014791646,0.00021501124,0.00007867756,0.00017064018],"genre_scores_gemma":[0.9973056,0.0010301552,0.00077107566,0.0004080501,0.00029806036,0.00003408966,0.000055817378,0.000049045375,0.00004813195],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99681485,0.0002758789,0.00095823925,0.000876278,0.0004676149,0.00060714054],"domain_scores_gemma":[0.99793965,0.0006510969,0.00037335986,0.00031117146,0.00031853357,0.00040617943],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00053612306,0.00045020707,0.0012364091,0.0006374132,0.00012532722,0.000040097366,0.00024059175,0.000234425,0.0004218467],"category_scores_gemma":[0.0000961236,0.0003976025,0.00018321691,0.0007735715,0.00026574158,0.00020412078,0.0002034666,0.00047469465,0.000012884526],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016065395,0.00022363616,0.18837625,0.0011374182,0.0003534793,0.000027100212,0.00008658429,0.002271277,0.8046696,0.00000853455,0.00007396124,0.0011656191],"study_design_scores_gemma":[0.011561145,0.0005774121,0.055336382,0.00029882533,0.0012005118,0.00005333534,0.000111612,0.8586639,0.071393706,0.000020569474,0.00027626773,0.00050634413],"about_ca_topic_score_codex":0.00016853929,"about_ca_topic_score_gemma":7.003381e-7,"teacher_disagreement_score":0.8563926,"about_ca_system_score_codex":0.00013100292,"about_ca_system_score_gemma":0.00017290647,"threshold_uncertainty_score":0.9998476},"labels":[],"label_agreement":null},{"id":"W2946073473","doi":"10.1016/j.pharma.2019.04.004","title":"Application of HPTLC, spectrofluorimetry and differential pulse voltammetry for determination of the antifungal drug posaconazole in suspension dosage form","year":2019,"lang":"en","type":"article","venue":"Annales Pharmaceutiques Françaises","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Alberta Health Services","funders":"","keywords":"Posaconazole; Differential pulse voltammetry; Antifungal drugs; Antifungal; Dosage form; Chromatography; Drug; Chemistry; Pharmacology; Medicine; Amphotericin B; Dermatology; Cyclic voltammetry","score_opus":0.013956484468191307,"score_gpt":0.31476829691380515,"score_spread":0.30081181244561384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946073473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99541926,0.0014943453,0.0011725787,0.00017712245,0.0000951805,0.001225109,0.000040368293,0.000016641314,0.00035940035],"genre_scores_gemma":[0.9989346,0.00040589983,0.00026359683,0.00008991209,0.000049698214,0.000018005125,0.000030257013,0.000016555772,0.00019145045],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988339,0.00004769271,0.00040961689,0.00027303977,0.00023953935,0.00019622874],"domain_scores_gemma":[0.99911034,0.0001856105,0.00020282727,0.00027477843,0.00017363673,0.00005282192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030222602,0.00015145952,0.00037462046,0.00013072017,0.000048487476,0.0000068411764,0.000113997594,0.00008497594,0.00005737423],"category_scores_gemma":[0.00006834682,0.00011182386,0.00015155452,0.00020898097,0.00015978253,0.00015549727,0.00005712774,0.0001681631,0.0000019165805],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064019166,0.00015876701,0.5015096,0.00057834643,0.000013345916,5.8308603e-7,0.00023567618,2.3536063e-7,0.4827642,0.00017024895,0.00004148334,0.013887269],"study_design_scores_gemma":[0.0010934216,0.00008128377,0.4652779,0.00010173572,0.000053318578,0.000002582696,0.00011390625,0.0016577336,0.53115594,0.00013756717,0.0002558865,0.00006872649],"about_ca_topic_score_codex":0.0001181986,"about_ca_topic_score_gemma":0.00016669405,"teacher_disagreement_score":0.04839171,"about_ca_system_score_codex":0.000029576528,"about_ca_system_score_gemma":0.000056926507,"threshold_uncertainty_score":0.45600447},"labels":[],"label_agreement":null},{"id":"W2946842165","doi":"10.1186/s12879-019-4039-7","title":"Utility of CT assessment in hematology patients with invasive aspergillosis: a post-hoc analysis of phase 3 data","year":2019,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Pfizer","keywords":"Aspergillosis; Medicine; Internal medicine; Voriconazole; Post-hoc analysis; Galactomannan; Hematology; Medical microbiology; Hematopoietic stem cell transplantation; Anidulafungin; Surgery; Caspofungin; Transplantation; Immunology; Dermatology; Antifungal","score_opus":0.01817463711327303,"score_gpt":0.322295337177016,"score_spread":0.3041207000637429,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946842165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974266,0.0002544938,0.00008095927,0.0000093488125,0.000032552645,0.00064438523,0.0009758837,0.000020581174,0.000555154],"genre_scores_gemma":[0.9987708,0.000029362605,0.000077051285,0.000054385455,0.0000050715043,0.00001187805,0.0010272982,0.000009935748,0.000014245247],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984396,0.00013123207,0.00046315437,0.00044111288,0.00034107274,0.00018382892],"domain_scores_gemma":[0.99789524,0.0002816885,0.0002524255,0.0011083027,0.00035910553,0.00010323242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014949271,0.00015179088,0.00082549156,0.00030896257,0.000020763242,0.0000046031173,0.00013972622,0.000039653365,0.0005418062],"category_scores_gemma":[0.00042777316,0.00011566194,0.00016592386,0.0007596258,0.00014130418,0.00014631383,0.000099082004,0.00009822429,0.0000043455943],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022795093,0.005199353,0.9904272,0.00068235636,0.00078872015,0.000010082207,0.000041304324,0.000015321742,0.00009390478,0.00008273552,0.00002752695,0.00035197719],"study_design_scores_gemma":[0.005468455,0.0013623936,0.9899464,0.00013497581,0.0019359251,0.0000010831423,0.00022532963,0.00067337207,0.00012436447,0.00001903159,0.0000057030343,0.000102933205],"about_ca_topic_score_codex":0.00039477792,"about_ca_topic_score_gemma":0.005027205,"teacher_disagreement_score":0.0046324274,"about_ca_system_score_codex":0.00004926039,"about_ca_system_score_gemma":0.0006130534,"threshold_uncertainty_score":0.5932398},"labels":[],"label_agreement":null},{"id":"W2946884765","doi":"10.1016/j.mib.2019.04.006","title":"The role of Aspergillus fumigatus polysaccharides in host–pathogen interactions","year":2019,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé","keywords":"Aspergillus fumigatus; Biology; Microbiology; Polysaccharide; Immune system; Cell wall; Pathogen; Glycan; Fungus; Immunity; Pathogenesis; Aspergillus; Immunology; Glycoprotein; Biochemistry","score_opus":0.07822563390784397,"score_gpt":0.4045373486542637,"score_spread":0.32631171474641973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946884765","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006517438,0.9938316,0.0000030904157,0.00003629973,0.004098206,0.000982641,0.0002196484,0.000010592413,0.00016618457],"genre_scores_gemma":[0.0016369162,0.9974702,0.000015828318,0.0000053493013,0.00018343757,0.00006374037,0.0004901851,0.000023366392,0.000110964706],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977147,0.00034283017,0.0010384404,0.00047238005,0.00006043091,0.0003712177],"domain_scores_gemma":[0.9984271,0.0004921667,0.00037887736,0.00057900435,0.00007504383,0.00004783032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044029535,0.0003043002,0.0015192225,0.0002912654,0.000040753588,0.00000807312,0.00028673006,0.0002943799,0.00007451798],"category_scores_gemma":[0.00023751006,0.00019588853,0.00044022256,0.00035856882,0.0002207086,0.000034991506,0.00013950572,0.0009694066,0.000117879084],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011182928,0.00031601108,0.006708428,0.013223386,0.00008666739,0.0000014619965,0.00013284093,1.6900161e-7,0.0036868905,0.0006146854,0.0005756532,0.97454196],"study_design_scores_gemma":[0.0002701469,0.00007747612,0.00071194576,0.015045419,0.000076650285,0.000043229815,0.00012185881,0.0000015690534,0.000022827584,0.000037096896,0.98343366,0.00015809572],"about_ca_topic_score_codex":0.000036865986,"about_ca_topic_score_gemma":0.00008969498,"teacher_disagreement_score":0.982858,"about_ca_system_score_codex":0.00025269372,"about_ca_system_score_gemma":0.00048270484,"threshold_uncertainty_score":0.7988102},"labels":[],"label_agreement":null},{"id":"W2948257756","doi":"10.1111/ctr.13623","title":"<i>Candida</i> infections in solid organ transplantation: Guidelines from the American Society of Transplantation Infectious Diseases Community of Practice","year":2019,"lang":"en","type":"article","venue":"Clinical Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":157,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Intensive care medicine; Transplantation; Echinocandin; Organ transplantation; Candida infections; Pancreas transplantation; Antifungal; Invasive candidiasis; Internal medicine; Kidney transplantation; Dermatology; Fluconazole","score_opus":0.05445481795908905,"score_gpt":0.4158374934613422,"score_spread":0.3613826755022531,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2948257756","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9895896,0.00013937174,0.0072420267,0.001061691,0.00016834274,0.0006246373,0.0005350271,0.000045855184,0.00059345586],"genre_scores_gemma":[0.9817748,0.015099847,0.0009090213,0.0013333529,0.00009843891,0.00001576087,0.0007262601,0.000019148858,0.000023336708],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99700946,0.00079432916,0.0013469285,0.0002787689,0.0003767698,0.00019374222],"domain_scores_gemma":[0.99374294,0.0047357664,0.00055307976,0.00042485178,0.00045750444,0.0000858804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001224479,0.00018370665,0.0006581695,0.00005938167,0.00012464207,0.000011000352,0.00013875517,0.00012556204,0.00005229811],"category_scores_gemma":[0.0003702917,0.00014249673,0.00036467914,0.0005744529,0.0004483163,0.00027110017,0.0000065556437,0.00058266864,0.000010533652],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002867758,0.0010527691,0.982586,0.00078729715,0.00016871048,0.000008557377,0.0029709437,0.00019532564,0.0062200436,0.00008271175,0.00011069081,0.0029491496],"study_design_scores_gemma":[0.0039179507,0.0008385593,0.9887602,0.00057188934,0.00096350623,0.000032242177,0.0018516943,0.00020671035,0.0022953996,0.00031567572,0.000104462524,0.00014171469],"about_ca_topic_score_codex":0.0028859694,"about_ca_topic_score_gemma":0.002115501,"teacher_disagreement_score":0.014960475,"about_ca_system_score_codex":0.00003738179,"about_ca_system_score_gemma":0.00022499017,"threshold_uncertainty_score":0.58108485},"labels":[],"label_agreement":null},{"id":"W2948513468","doi":"10.1139/cjm-2019-0155","title":"Zerumbone inhibits <i>Candida albicans</i> biofilm formation and hyphal growth","year":2019,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Research Foundation of Korea; Soonchunhyang University; National Research Foundation","keywords":"Biofilm; Candida albicans; Hypha; Microbiology; Corpus albicans; Chemistry; Virulence factor; Virulence; Antifungal; Biology; Bacteria; Biochemistry; Gene","score_opus":0.007074663704514448,"score_gpt":0.20669335389359725,"score_spread":0.1996186901890828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2948513468","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950993,0.0014423184,0.000042505428,0.0016448081,0.00022963605,0.0001266327,0.00003562881,0.00000295877,0.0013762282],"genre_scores_gemma":[0.9978518,0.00009570884,0.00017772605,0.0012783548,0.00007925228,3.25471e-7,0.00001813349,0.000007910906,0.00049077155],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992364,0.000043300395,0.0003113786,0.00011194748,0.000035435354,0.00026152423],"domain_scores_gemma":[0.9991567,0.000034737284,0.00014126723,0.000102399244,0.00019690648,0.0003679895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025385062,0.00009505608,0.00030621316,0.00018486561,0.000049840553,0.000011601538,0.00006349188,0.00012423485,0.0003086425],"category_scores_gemma":[0.00008207275,0.00007679899,0.00007081591,0.0000951084,0.0001460015,0.00011213469,0.000007326592,0.000228055,0.000040665433],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019417304,0.000016500308,0.30062768,0.000104970204,0.000053300526,0.00011387715,0.0003287726,3.4955502e-7,0.68852764,0.0002876387,0.007941771,0.0018033028],"study_design_scores_gemma":[0.011743383,0.0047208103,0.48712942,0.0010680222,0.00037572652,0.025966577,0.0022352424,0.000024747596,0.21330847,0.0009719162,0.2515798,0.0008758999],"about_ca_topic_score_codex":0.000793167,"about_ca_topic_score_gemma":0.008930998,"teacher_disagreement_score":0.4752192,"about_ca_system_score_codex":0.0001188116,"about_ca_system_score_gemma":0.0006811892,"threshold_uncertainty_score":0.49837065},"labels":[],"label_agreement":null},{"id":"W2951453703","doi":"10.1128/msphere.00299-19","title":"mSphere of Influence: Start with an Interesting Biological Phenomenon","year":2019,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Candida albicans; Phenomics; Biology; Functional genomics; Computational biology; Genetics; Genomics; Genome; Gene","score_opus":0.023389580510655043,"score_gpt":0.2771219344224899,"score_spread":0.25373235391183485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2951453703","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98265547,0.00022765218,0.00005547437,0.000048661914,0.00002846673,0.000295245,0.000005381507,0.000052588024,0.016631065],"genre_scores_gemma":[0.99656314,0.000013650522,0.0018695892,0.00016917552,0.000038565686,0.0000040895316,0.000010395124,0.000014298236,0.0013170952],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99898285,0.00004230004,0.00023972192,0.00030616217,0.00020127169,0.00022767],"domain_scores_gemma":[0.999178,0.000051229752,0.0000890753,0.0004238248,0.00014492021,0.00011296209],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016732735,0.00013616947,0.00033700574,0.000012922063,0.000030161642,0.0000098327,0.00010939154,0.00009523953,0.0020142177],"category_scores_gemma":[0.00007030526,0.00008757508,0.00004982365,0.0001470225,0.00013380968,0.00012131866,0.00003484261,0.00019350398,0.00009339665],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00096995983,0.00015075857,0.9635002,0.00016913428,0.000028285971,0.000016423282,0.00023763855,0.000024838031,0.030415932,0.00015661388,0.000049045055,0.004281168],"study_design_scores_gemma":[0.0013151162,0.003862118,0.98648256,0.0005005507,0.00003120174,0.000013397874,0.0036786632,0.00012138334,0.0025002635,0.00021486483,0.001086663,0.00019322062],"about_ca_topic_score_codex":0.00007434635,"about_ca_topic_score_gemma":0.00014969107,"teacher_disagreement_score":0.02791567,"about_ca_system_score_codex":0.000040746476,"about_ca_system_score_gemma":0.000097418066,"threshold_uncertainty_score":0.9988981},"labels":[],"label_agreement":null},{"id":"W2951636677","doi":"10.1128/mbio.01226-18","title":"Candida albicans Hyphal Expansion Causes Phagosomal Membrane Damage and Luminal Alkalinization","year":2018,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":115,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Candida albicans; Microbiology; Hypha; Chemistry; Phagosome; Cell biology; Biology; Phagocytosis","score_opus":0.015766572682484846,"score_gpt":0.28605297530951096,"score_spread":0.27028640262702613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2951636677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958434,0.00014142292,0.00018018152,0.0005505226,0.00017058745,0.0001646409,0.000012178136,0.000048369,0.0028886574],"genre_scores_gemma":[0.9958768,0.000057024794,0.00024717234,0.00057049096,0.0004665483,0.000003353636,0.000040285802,0.000013620348,0.0027247213],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99914706,0.00003088029,0.00016595733,0.00026722602,0.00019519251,0.0001937121],"domain_scores_gemma":[0.99944705,0.000032254993,0.000039351133,0.00022939799,0.00011983267,0.00013210092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013175061,0.00010955081,0.00018906896,0.000044511857,0.00013082555,0.00001811041,0.000041120493,0.00007993677,0.0005260217],"category_scores_gemma":[0.000110725174,0.000091430826,0.000033765828,0.000126372,0.00027678057,0.000097449345,0.000027963475,0.00008933224,0.00004674039],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010255447,0.00026691405,0.5912836,0.00021128726,0.000058485544,0.00013384927,0.0017276988,2.3288683e-7,0.39433503,0.00029973334,0.0044340207,0.0062236018],"study_design_scores_gemma":[0.0018584434,0.0008267143,0.87266237,0.00013269208,0.00013792509,0.00005856762,0.0007101784,0.000271513,0.11351412,0.00007712199,0.009533456,0.00021687848],"about_ca_topic_score_codex":0.00028930386,"about_ca_topic_score_gemma":0.0010306559,"teacher_disagreement_score":0.2813788,"about_ca_system_score_codex":0.0000324716,"about_ca_system_score_gemma":0.00008660758,"threshold_uncertainty_score":0.5759569},"labels":[],"label_agreement":null},{"id":"W2951802063","doi":"10.1097/inf.0000000000002317","title":"Management of Invasive Fungal Disease in Neonates and Children","year":2019,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Medical Research Council Centre for Medical Mycology; Imperial College Healthcare NHS Trust; Imperial College London; University of Aberdeen; University Hospital Southampton NHS Foundation Trust; Wellcome Trust; McMaster University; University of Oxford; Alder Hey Children's NHS Foundation Trust; Gilead Sciences","keywords":"Medicine; Voriconazole; Fluconazole; Intensive care medicine; Aspergillosis; Pediatrics; Neutropenia; Amphotericin B; Antifungal; Internal medicine; Chemotherapy; Immunology; Dermatology","score_opus":0.0043038106035590065,"score_gpt":0.22765480272495553,"score_spread":0.22335099212139653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2951802063","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951343,0.0033548635,0.000011915574,0.00025622098,0.00011344677,0.00049431634,0.000014089767,0.000013511052,0.0006073215],"genre_scores_gemma":[0.9947604,0.0046344283,0.00001450438,0.000103650025,0.00022093738,0.0000057128195,0.0000031580087,0.000011903813,0.00024531636],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989373,0.000077446515,0.00028856663,0.00017152955,0.00030694195,0.00021818317],"domain_scores_gemma":[0.99912804,0.000103449696,0.00013534784,0.00024067797,0.00007608034,0.00031639487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032862197,0.00012683231,0.00021028791,0.00014408003,0.000086231725,0.000022144262,0.00008385432,0.000027513915,0.00016053635],"category_scores_gemma":[0.000101149184,0.00008352412,0.00012546111,0.00024532728,0.000062579245,0.000094926785,0.00006420591,0.00027898967,0.000024766889],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071413664,0.00022425744,0.9974839,0.00028333266,0.000066681525,0.00016756545,0.00007889149,0.000065320615,0.000008315542,0.00014250797,0.00009455411,0.0006705237],"study_design_scores_gemma":[0.0015813829,0.00009764752,0.9959165,0.00007686505,0.00047132687,0.0000573694,0.000083363615,0.000039270897,0.00000306517,0.0015800446,0.0000058194446,0.000087340224],"about_ca_topic_score_codex":0.000022133494,"about_ca_topic_score_gemma":0.000006565869,"teacher_disagreement_score":0.0015674086,"about_ca_system_score_codex":0.00006448941,"about_ca_system_score_gemma":0.00020409112,"threshold_uncertainty_score":0.34060147},"labels":[],"label_agreement":null},{"id":"W2952016643","doi":"10.1101/113696","title":"Microbial glycoside hydrolases as antibiofilm agents with cross-kingdom activity","year":2017,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children; McGill University; McGill University Health Centre","funders":"","keywords":"Aspergillus fumigatus; Biofilm; Microbiology; Glycoside hydrolase; Caspofungin; Pseudomonas aeruginosa; Chemistry; Biology; Biochemistry; Amphotericin B; Enzyme; Bacteria; Antifungal","score_opus":0.0262235794059743,"score_gpt":0.29056312006006835,"score_spread":0.26433954065409404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952016643","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959358,0.00030990367,0.00021733,0.0002617392,0.0009026848,0.0013282177,0.00035958787,0.00042522463,0.00025948498],"genre_scores_gemma":[0.9969998,0.00020817984,0.00133627,0.00032372246,0.00074596994,0.000055201483,0.000001420967,0.00020041283,0.0001290393],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99557734,0.00013379211,0.0005732346,0.0019084434,0.0008268903,0.0009802856],"domain_scores_gemma":[0.9941809,0.00008066897,0.00084668526,0.0034839555,0.0008061342,0.00060162117],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00069446146,0.0009542975,0.0013605242,0.0002309798,0.00062474475,0.00060893403,0.0007591999,0.00093466026,0.00020507781],"category_scores_gemma":[0.00075580407,0.00086110533,0.0004101079,0.00022805523,0.0007543771,0.00035482418,0.00063162553,0.0015940742,0.00025637753],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001669208,0.00050749694,0.3213798,0.0010059625,0.00038468526,0.00091432803,0.000006388644,0.000008555459,0.6734449,0.00005385792,0.00062159286,0.000003198478],"study_design_scores_gemma":[0.0013844183,0.00020271698,0.55891275,0.0012301535,0.00029238246,1.9264908e-7,6.872817e-7,0.00006796007,0.4342516,0.0000012589456,0.003004978,0.00065085985],"about_ca_topic_score_codex":0.0005445901,"about_ca_topic_score_gemma":0.00003823712,"teacher_disagreement_score":0.2391933,"about_ca_system_score_codex":0.0005106158,"about_ca_system_score_gemma":0.0021691676,"threshold_uncertainty_score":0.999384},"labels":[],"label_agreement":null},{"id":"W2952117804","doi":"10.5539/gjhs.v11n7p60","title":"Direct Treatment Costs of Invasive Candidiasis in Haematology Patients at a South African Private Hospital","year":2019,"lang":"en","type":"article","venue":"Global Journal of Health Science","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Fluconazole; Echinocandin; Hematology; Medicine; Invasive candidiasis; Anidulafungin; Internal medicine; Echinocandins; Antifungal; Intensive care medicine; Micafungin; Caspofungin; Dermatology","score_opus":0.014341596493475266,"score_gpt":0.3032647380354,"score_spread":0.2889231415419247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952117804","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977602,0.00036294202,0.000004554434,0.00052396697,0.00025980588,0.00043063276,0.000017305998,0.000002823028,0.0006378079],"genre_scores_gemma":[0.99951136,0.00013308828,0.00020177002,0.00012637569,0.0000096547055,0.0000012789214,0.0000010298124,0.0000026792889,0.000012756578],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981057,0.00005796885,0.00064464874,0.00022054515,0.00058248854,0.00038865246],"domain_scores_gemma":[0.99851525,0.000045347173,0.000677167,0.00020495501,0.00029176136,0.000265524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006752464,0.0001052108,0.0006394953,0.000121971665,0.000063786625,0.000007436417,0.00017282774,0.00003533411,0.000017417373],"category_scores_gemma":[0.00030284844,0.000072105104,0.00009127099,0.0005836933,0.00030615597,0.00014578094,0.00005110281,0.00007618241,0.0000099892795],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035442377,0.0003021613,0.9965495,0.00006185676,0.000010198421,0.000039042818,0.0005617077,0.0000043693162,0.00014754165,0.000054874945,0.000030123982,0.0018842077],"study_design_scores_gemma":[0.0017197039,0.0031829404,0.9931167,0.00028991263,0.000010951498,0.00005331753,0.0006201521,0.0000049056885,0.0008880215,0.00002155297,0.000038303962,0.000053590484],"about_ca_topic_score_codex":0.0005317453,"about_ca_topic_score_gemma":0.00041547604,"teacher_disagreement_score":0.0034328445,"about_ca_system_score_codex":0.0024026372,"about_ca_system_score_gemma":0.001970096,"threshold_uncertainty_score":0.62828124},"labels":[],"label_agreement":null},{"id":"W2952282925","doi":"10.1002/chin.201330266","title":"ChemInform Abstract: Designing a New Antifungal Glycoconjugate Vaccine","year":2013,"lang":"en","type":"article","venue":"ChemInform","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Chemistry; Antifungal; Glycoconjugate; Nanotechnology; Combinatorial chemistry; Microbiology; Biochemistry","score_opus":0.019276513025025012,"score_gpt":0.26317522683319655,"score_spread":0.24389871380817155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952282925","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16153401,0.00023464556,0.0000055052,0.0005887794,0.00010578319,0.00069304416,0.0000034259542,0.00019589569,0.8366389],"genre_scores_gemma":[0.83850545,0.00005956701,0.00037170574,0.0007842311,0.00030939278,0.000029411713,0.000059570077,0.000029755181,0.15985093],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981021,5.4805795e-8,0.00058594823,0.0003239638,0.00038302856,0.0006049053],"domain_scores_gemma":[0.998428,0.00007437868,0.000161774,0.000576956,0.00021212945,0.0005467875],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00020648631,0.00030793436,0.00047718314,0.00007876183,0.000104076746,0.000082113416,0.00018791699,0.00021731197,0.014065518],"category_scores_gemma":[0.00027947268,0.0002529025,0.00021143927,0.00023747307,0.000060049697,0.0006330846,0.00007151195,0.00037803836,0.0018043534],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028874923,0.00009281894,0.010717905,0.00037400998,0.00008705259,0.00002951508,0.0005383262,5.0672682e-8,0.060084768,0.00008439934,0.3523477,0.5753547],"study_design_scores_gemma":[0.0028748664,0.00018651683,0.22565114,0.0003033253,0.000095780044,0.00008980115,0.0007396655,0.000023801513,0.7225983,0.00028438366,0.046641704,0.00051071646],"about_ca_topic_score_codex":0.00019206837,"about_ca_topic_score_gemma":0.000011303643,"teacher_disagreement_score":0.67697144,"about_ca_system_score_codex":0.00015144466,"about_ca_system_score_gemma":0.00033534513,"threshold_uncertainty_score":0.9999923},"labels":[],"label_agreement":null},{"id":"W2953080604","doi":"10.3390/jof5020052","title":"Mass Spectrometry-Based Proteomics of Fungal Pathogenesis, Host–Fungal Interactions, and Antifungal Development","year":2019,"lang":"en","type":"review","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Proteomics; Antifungal; Biology; Antifungal drug; Computational biology; Host (biology); Identification (biology); Quantitative proteomics; Fungal pathogen; Pathogen; Microbiology; Ecology; Genetics; Gene","score_opus":0.05398653113381112,"score_gpt":0.3431747507967975,"score_spread":0.28918821966298636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953080604","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008199783,0.9871798,0.0024020742,0.000039484497,0.00068500446,0.001072219,0.000089434354,0.000014222853,0.0003179428],"genre_scores_gemma":[0.00438155,0.94795066,0.046360042,0.000043702268,0.00043919942,0.000010858057,0.000032314754,0.00008228879,0.0006993762],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9957016,0.00023802288,0.0022862554,0.00045065852,0.0008949975,0.00042845812],"domain_scores_gemma":[0.9958136,0.00041852315,0.002303449,0.0005252915,0.0006187792,0.0003203238],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014041981,0.0005882961,0.0034531795,0.0008797875,0.0000806024,0.000047547295,0.00029210286,0.00039235957,0.00021095497],"category_scores_gemma":[0.0003464607,0.000433934,0.0010867708,0.0005171295,0.000113472146,0.00017464536,0.00006792847,0.0012599515,0.000032038453],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025590174,0.0015877831,0.04804135,0.12571412,0.0035217823,0.0013418768,0.00016758859,0.0000017280857,0.032135807,0.00010121807,0.0019131814,0.7829145],"study_design_scores_gemma":[0.003866381,0.002572189,0.028668398,0.08201564,0.008576978,0.003779373,0.00024239665,0.000028524379,0.006684445,0.000019085432,0.86205745,0.0014891529],"about_ca_topic_score_codex":0.000002428015,"about_ca_topic_score_gemma":0.000003764321,"teacher_disagreement_score":0.86014426,"about_ca_system_score_codex":0.0004940808,"about_ca_system_score_gemma":0.0032948777,"threshold_uncertainty_score":0.99981123},"labels":[],"label_agreement":null},{"id":"W2953152748","doi":"10.1038/s41598-018-29973-8","title":"A phenotypic small-molecule screen identifies halogenated salicylanilides as inhibitors of fungal morphogenesis, biofilm formation and host cell invasion","year":2018,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Université Laval","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Dartmouth College; Centre Hospitalier Universitaire de Québec; Government of Canada; Fondation CHU de Québec; Audrey and Theodor Geisel School of Medicine at Dartmouth; Université Laval","keywords":"Niclosamide; Candida albicans; Biology; Biofilm; Corpus albicans; Microbiology; Yeast; Pathogenic fungus; Antimicrobial; Biochemistry; Bacteria; Genetics; Gene","score_opus":0.018086037035289364,"score_gpt":0.25340128584652727,"score_spread":0.23531524881123791,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953152748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953771,0.0007467843,0.00014227115,0.000073493065,0.0009810784,0.0005254346,0.000008848246,0.000060635262,0.0020843209],"genre_scores_gemma":[0.9970433,0.000027384382,0.00031367043,0.000053561616,0.0000897751,0.0000074548425,0.000103429884,0.000018584788,0.002342801],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976175,0.00006535772,0.00075032393,0.0006827327,0.0005715151,0.00031259228],"domain_scores_gemma":[0.99796695,0.00003327046,0.00042108595,0.0007586529,0.00063479657,0.00018525834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013401328,0.00019046072,0.0003366953,0.00027419635,0.00032765506,0.000118880445,0.00008471601,0.00013564185,0.00012929113],"category_scores_gemma":[0.0004207364,0.00015883161,0.00011549251,0.00059076137,0.0007924045,0.00025043773,0.00010834934,0.00010125983,0.00004412294],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013554168,0.000104938386,0.08660156,0.00021793663,0.000017145168,0.00013328287,0.00047049258,2.1304766e-7,0.9091356,0.0000138672485,0.002856036,0.00031341787],"study_design_scores_gemma":[0.0002897755,0.00020557515,0.071368426,0.00016406803,0.00007626904,0.00019643843,0.0005007656,0.000049624956,0.9262122,0.00031410766,0.0004792094,0.00014357192],"about_ca_topic_score_codex":0.00031991865,"about_ca_topic_score_gemma":0.0004331591,"teacher_disagreement_score":0.017076604,"about_ca_system_score_codex":0.0000539089,"about_ca_system_score_gemma":0.00024311861,"threshold_uncertainty_score":0.64769655},"labels":[],"label_agreement":null},{"id":"W2953431223","doi":"10.1016/j.mib.2019.05.008","title":"Global epidemiology of emerging Candida auris","year":2019,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":319,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Natural Environment Research Council; Sight Research UK; Mauritius Research Council; Canadian Institute for Advanced Research","keywords":"Candida auris; Biology; Outbreak; Epidemiology; Clade; Infection control; Public health; Antifungal; Intensive care medicine; Microbiology; Virology; Medicine; Phylogenetics; Genetics; Pathology","score_opus":0.1859075478273592,"score_gpt":0.47803708860377,"score_spread":0.2921295407764108,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953431223","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019634864,0.9916515,0.00009063934,0.000040892584,0.006521696,0.0009094265,0.0004298429,0.000017801602,0.00014190182],"genre_scores_gemma":[0.00017391688,0.99766743,0.00008995394,0.000019748868,0.0003006217,0.000029273167,0.0016258403,0.000019637955,0.00007357136],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99646646,0.00067193067,0.0015632851,0.0007246341,0.000046753245,0.00052692246],"domain_scores_gemma":[0.99805343,0.00048306154,0.0006792212,0.0006152707,0.000083687126,0.00008531619],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000804112,0.00040689958,0.0038541968,0.0002194199,0.000021165073,0.0000010661731,0.00025442315,0.0006552576,0.00017765201],"category_scores_gemma":[0.0005812405,0.00031171864,0.0007103883,0.00041252846,0.00027735042,0.000020546046,0.0001483081,0.0005800914,0.00013071828],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008475586,0.00023041977,0.1275508,0.10663129,0.00015751694,0.0000018956034,0.000038130558,7.488338e-7,0.0000054640436,0.00062179216,0.011461832,0.7532154],"study_design_scores_gemma":[0.0004320232,0.00013533782,0.0018800523,0.022920612,0.00018507178,0.000077967015,0.000016133417,0.0000014087789,2.4745938e-7,0.000056411736,0.9740742,0.00022057629],"about_ca_topic_score_codex":0.00005452873,"about_ca_topic_score_gemma":0.00002079473,"teacher_disagreement_score":0.96261233,"about_ca_system_score_codex":0.00038850808,"about_ca_system_score_gemma":0.00075331784,"threshold_uncertainty_score":0.9999335},"labels":[],"label_agreement":null},{"id":"W2954402320","doi":"10.1038/s41598-019-45624-y","title":"Screening of Candida albicans GRACE library revealed a unique pattern of biofilm formation under repression of the essential gene ILS1","year":2019,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Concordia University","funders":"Fonds de recherche du Québec – Nature et technologies; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biofilm; Mutant; Gene; Biology; Candida albicans; Psychological repression; Yeast; Cell biology; Microbiology; Corpus albicans; Genetics; Gene expression; Bacteria","score_opus":0.011512054402777493,"score_gpt":0.2501702778880355,"score_spread":0.23865822348525798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2954402320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956747,0.0001089984,0.0017430095,0.00015811497,0.00068475923,0.0005307153,0.000012051027,0.000014577203,0.0010730535],"genre_scores_gemma":[0.9938326,0.000009224571,0.00047111273,0.000026753301,0.000015975313,0.000003022767,0.000060322265,0.000010160465,0.0055708378],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980887,0.00006667075,0.00076288165,0.0003498589,0.0005791515,0.00015270218],"domain_scores_gemma":[0.9977135,0.000038362003,0.0008507683,0.0011582334,0.00018152996,0.000057593166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083788583,0.00009395311,0.00031142932,0.00010359367,0.000067621724,0.000014522549,0.000112137226,0.00007872588,0.00027706698],"category_scores_gemma":[0.00009429121,0.00006142843,0.00017403917,0.00045738256,0.00026990974,0.00024836272,0.00010676947,0.00010720042,0.0000010920685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007730506,0.0000683976,0.40051955,0.00034709417,0.000017455852,0.000009309866,0.00035231354,0.000039244933,0.5969989,0.000019092035,0.0009988872,0.00055246445],"study_design_scores_gemma":[0.00025282937,0.000046601155,0.21875986,0.000698854,0.00004714775,0.00003982699,0.00034972795,0.00029904637,0.7787318,0.00052453845,0.00018664058,0.00006310581],"about_ca_topic_score_codex":0.00016897752,"about_ca_topic_score_gemma":0.00003997165,"teacher_disagreement_score":0.1817597,"about_ca_system_score_codex":0.000017153721,"about_ca_system_score_gemma":0.00024966247,"threshold_uncertainty_score":0.30336893},"labels":[],"label_agreement":null},{"id":"W2955030705","doi":"10.1016/j.mmcr.2019.07.002","title":"Disseminated cerebral aspergillosis complicated by thrombotic microangiopathy","year":2019,"lang":"en","type":"article","venue":"Medical Mycology Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Medicine; Voriconazole; Thrombotic microangiopathy; Aspergillosis; Rituximab; Cyclophosphamide; Amphotericin B; Internal medicine; Gastroenterology; Pathology; Dermatology; Immunology; Chemotherapy; Antifungal; Lymphoma","score_opus":0.005981406734810818,"score_gpt":0.2693699813152469,"score_spread":0.2633885745804361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955030705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905932,0.0007599065,0.00006370471,0.002081632,0.0004930174,0.0006536226,0.000011579469,0.00016222906,0.0051811403],"genre_scores_gemma":[0.99529105,0.00004016604,0.00009795911,0.0014826555,0.00007215549,0.000025373964,0.00018303795,0.000033244072,0.0027743399],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99724454,0.00011708618,0.000753314,0.00075602013,0.00057009945,0.0005589433],"domain_scores_gemma":[0.99802464,0.00023517165,0.00019550211,0.00076175,0.00015835218,0.00062458037],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000698838,0.00025501676,0.0007961906,0.000080025195,0.0001031231,0.00001039893,0.000071871444,0.0005152915,0.007932207],"category_scores_gemma":[0.00096115033,0.00020109047,0.00021511794,0.00031172784,0.00037231445,0.000053918455,0.00009550627,0.0005427403,0.0002979799],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016484797,0.0007512497,0.68165684,0.00018159642,0.00016633426,0.2326308,0.000084951054,1.8286177e-7,0.045377277,0.000051074076,0.03766559,0.0012692726],"study_design_scores_gemma":[0.0023737787,0.0012355802,0.48872128,0.0003735686,0.000476626,0.47835687,0.0004338372,0.00035514514,0.011176631,0.00021753288,0.01562997,0.00064918364],"about_ca_topic_score_codex":0.0001690291,"about_ca_topic_score_gemma":0.000044830133,"teacher_disagreement_score":0.24572606,"about_ca_system_score_codex":0.00014939689,"about_ca_system_score_gemma":0.00027884488,"threshold_uncertainty_score":0.9929747},"labels":[],"label_agreement":null},{"id":"W2955588583","doi":"10.1371/journal.ppat.1007850","title":"The protective effect of inflammatory monocytes during systemic C. albicans infection is dependent on collaboration between C-type lectin-like receptors","year":2019,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council Centre for Medical Mycology; UK Dementia Research Institute; National Institutes of Health; Kidney Research UK; University of Aberdeen; Parc Geneteg Cymru; International Seafood Sustainability Foundation; Wellcome Trust; National Institute of General Medical Sciences; Medical Research Council; Wellcome","keywords":"Candida albicans; C-type lectin; Immune system; Innate immune system; Corpus albicans; Immunology; Pattern recognition receptor; Biology; Systemic candidiasis; Microbiology; Monocyte; Acquired immune system; Receptor; Chemokine","score_opus":0.011119370151046196,"score_gpt":0.25835657689088337,"score_spread":0.24723720673983718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955588583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965779,0.00013212801,0.000011631424,0.000047504043,0.0006113576,0.0022829778,0.000008059996,0.000066821405,0.00026159547],"genre_scores_gemma":[0.9985812,0.00008566293,0.00000776405,0.000013797886,0.00011874458,0.00007644881,0.00001241873,0.000027062799,0.0010769347],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99837077,0.00028507618,0.00035125724,0.0003369525,0.00042795105,0.00022796897],"domain_scores_gemma":[0.99858785,0.00035526507,0.00021980665,0.0004459375,0.00031919195,0.00007194677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005106116,0.0001857607,0.00038532107,0.00008951008,0.00020021184,0.00001977806,0.00006900553,0.00014627111,0.000030274743],"category_scores_gemma":[0.00042645627,0.00012666978,0.000096105214,0.00033307902,0.00005764366,0.00008054972,0.000027912234,0.00026384325,0.00012555599],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010118871,0.00003631227,0.74658203,0.00057024055,0.00014196816,0.0000025757795,0.0004683856,0.000017808201,0.25063977,0.0000057507236,0.000046971007,0.00047629734],"study_design_scores_gemma":[0.0010640363,0.002043417,0.56060076,0.00054206,0.00021942759,0.000004603241,0.00033483875,0.00006189287,0.4348259,0.000012467866,0.00013210281,0.00015852615],"about_ca_topic_score_codex":0.00003781431,"about_ca_topic_score_gemma":0.000074462834,"teacher_disagreement_score":0.18598129,"about_ca_system_score_codex":0.00035862147,"about_ca_system_score_gemma":0.00013997922,"threshold_uncertainty_score":0.5165444},"labels":[],"label_agreement":null},{"id":"W2955740612","doi":"10.1053/j.jepm.2019.06.007","title":"Diagnosis and long-term management of blastomycosis in two ferrets (Mustela putorius furo)","year":2019,"lang":"en","type":"article","venue":"Journal of Exotic Pet Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Health Sciences Centre","funders":"","keywords":"Blastomycosis; Medicine; Blastomyces dermatitidis; Mustela putorius; Pathology; Respiratory distress; Histopathology; Surgery","score_opus":0.030778817855905763,"score_gpt":0.3251764795408859,"score_spread":0.29439766168498016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955740612","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931621,0.0031744882,0.000056602155,0.0012635833,0.0004227303,0.00031287727,0.000001386582,0.00000518617,0.0016010486],"genre_scores_gemma":[0.9952318,0.0034318913,0.00030411634,0.00018849681,0.00018434798,0.0000028378574,0.0000019849317,0.00001496448,0.0006395778],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979815,0.000060703216,0.00085329486,0.0002033143,0.00066228275,0.00023892424],"domain_scores_gemma":[0.99870163,0.0002065432,0.00039437375,0.0002934797,0.00018686656,0.00021709365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009251581,0.00017142692,0.00082375796,0.00029102137,0.000016688942,0.000005384464,0.00012908086,0.000039758586,0.0005674903],"category_scores_gemma":[0.00016742315,0.000118929056,0.0001081421,0.00027942998,0.00015660703,0.00011070997,0.00005124936,0.00032497806,0.000008520991],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00086573337,0.0004254747,0.9123841,0.0017454552,0.00024190574,0.07080619,0.000392404,0.000005276147,0.001659975,0.00012072537,0.00040702833,0.010945753],"study_design_scores_gemma":[0.005704761,0.00090181176,0.96671146,0.0049073547,0.00037667557,0.020420024,0.00062653364,0.000027227163,0.00003594207,0.00008678209,0.00010773809,0.000093665534],"about_ca_topic_score_codex":0.000018966835,"about_ca_topic_score_gemma":0.000044482502,"teacher_disagreement_score":0.054327406,"about_ca_system_score_codex":0.00011980839,"about_ca_system_score_gemma":0.00006565385,"threshold_uncertainty_score":0.62136203},"labels":[],"label_agreement":null},{"id":"W2956200033","doi":"10.1111/tid.13141","title":"Perspectives on <i>Scedosporium</i> species and <i>Lomentospora prolificans</i> in lung transplantation: Results of an international practice survey from ESCMID fungal infection study group and study group for infections in compromised hosts, and European Confederation of Medical Mycology","year":2019,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Contraindication; Lung transplantation; Colonization; Medicine; Transplantation; Cystic fibrosis; Internal medicine; Lung; Biology; Microbiology; Pathology; Alternative medicine","score_opus":0.016993713322201134,"score_gpt":0.30385350799988103,"score_spread":0.2868597946776799,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2956200033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954643,0.00008499437,0.0001635272,0.00011674963,0.00013079982,0.0030097389,0.0006984334,0.00003081114,0.00030063133],"genre_scores_gemma":[0.99825203,0.0010078545,0.000018349541,0.000041018433,0.00004555827,0.00006675974,0.0005434535,0.00001899491,0.000005998194],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973873,0.0007569581,0.0006583221,0.0006029644,0.000431396,0.0001630777],"domain_scores_gemma":[0.9984573,0.0008024069,0.00020340041,0.00019966344,0.00015996034,0.00017725957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017639119,0.0002145272,0.0004693431,0.00026151558,0.00007076489,0.000036078785,0.00005725267,0.00008544323,0.00001771348],"category_scores_gemma":[0.00029624303,0.00020358106,0.00004182829,0.0001570913,0.00014616961,0.00034798644,0.000013242702,0.00026732092,3.269486e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.023247529,0.009812595,0.95552564,0.00035219832,0.00014834017,0.00010464918,0.008704765,0.000025765386,0.0015964374,0.00029901622,0.0000014487147,0.00018161043],"study_design_scores_gemma":[0.020243425,0.0046709417,0.9699951,0.00021427308,0.00025393622,0.000021426837,0.0038635845,0.0004924595,0.0000536064,0.000022268161,0.000007589887,0.00016140654],"about_ca_topic_score_codex":0.004202569,"about_ca_topic_score_gemma":0.020391013,"teacher_disagreement_score":0.016188445,"about_ca_system_score_codex":0.00007423191,"about_ca_system_score_gemma":0.00008960088,"threshold_uncertainty_score":0.99748427},"labels":[],"label_agreement":null},{"id":"W2958392080","doi":"10.1007/s11046-019-00361-8","title":"Contemporary Gene Flow is a Major Force Shaping the Aspergillus fumigatus Population in Auckland, New Zealand","year":2019,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Aspergillus fumigatus; Gene flow; Biology; Population; Aspergillosis; Gene; Genetics; Evolutionary biology; Genetic variation; Microbiology; Immunology; Medicine","score_opus":0.028131589542648452,"score_gpt":0.27344398257760116,"score_spread":0.24531239303495272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2958392080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99332076,0.0012872501,0.00010003695,0.0012436389,0.00019616677,0.0006451928,0.00002008589,0.00005462654,0.0031322318],"genre_scores_gemma":[0.98368174,0.000040226034,0.0005750243,0.0016561482,0.00012814671,0.000009543009,0.00009208606,0.000018313181,0.013798788],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99866414,0.000080366044,0.00033848663,0.00038316863,0.00023894644,0.00029486488],"domain_scores_gemma":[0.9992026,0.00007484798,0.00008667532,0.0005042439,0.000041169133,0.00009042842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050688203,0.00016862978,0.00036286266,0.00006988759,0.000060850154,0.000023796209,0.00012217778,0.00015800545,0.00030309046],"category_scores_gemma":[0.00014698261,0.0001088955,0.000106549545,0.00021564815,0.000041985008,0.00010567559,0.00005431507,0.0002953821,0.00020660103],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049165444,0.000032905587,0.9758859,0.000040202533,0.000009329584,0.00011015325,0.00054461457,0.000010364379,0.01614819,0.000021283706,0.005097027,0.0016083444],"study_design_scores_gemma":[0.0017279986,0.00019185257,0.9944212,0.00011687452,0.000020065314,0.00005086097,0.00016563162,0.0007578326,0.0010592025,0.00035172293,0.0009998768,0.00013692048],"about_ca_topic_score_codex":0.00066728744,"about_ca_topic_score_gemma":0.0001720126,"teacher_disagreement_score":0.018535228,"about_ca_system_score_codex":0.000095353054,"about_ca_system_score_gemma":0.00012283801,"threshold_uncertainty_score":0.44406298},"labels":[],"label_agreement":null},{"id":"W2961241773","doi":"10.1016/j.fgb.2019.103253","title":"Epigenetic mechanisms of drug resistance in fungi","year":2019,"lang":"en","type":"review","venue":"Fungal Genetics and Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Canadian Institute for Advanced Research; National Institutes of Health; Max and Minnie Tomerlin Voelcker Fund","keywords":"Epigenetics; Biology; Drug resistance; Antifungal drug; Antifungal drugs; Chromatin; Drug; Gene; Efflux; Mechanism (biology); Drug development; Computational biology; Genetics; Bioinformatics; Pharmacology; Candida albicans","score_opus":0.06929565958319552,"score_gpt":0.3540616030564913,"score_spread":0.2847659434732958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2961241773","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017498665,0.99596274,0.000108068285,0.00002291943,0.000220225,0.0007755166,0.000113280235,0.000008733014,0.0010386327],"genre_scores_gemma":[0.01068615,0.985244,0.0012427227,0.000036707086,0.00006801323,0.000030230856,0.00008892384,0.000031475225,0.0025718298],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980112,0.00017741424,0.0007674426,0.00059421395,0.00010363755,0.0003461006],"domain_scores_gemma":[0.9988365,0.00018882801,0.0002671518,0.0005342369,0.00007502686,0.00009825561],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00036781395,0.0003330941,0.0020481283,0.00018172206,0.000022103828,0.000005475049,0.00016017097,0.00047903392,0.00007449503],"category_scores_gemma":[0.000056362394,0.00024643293,0.00027455125,0.00023367943,0.00016402156,0.0000072226044,0.00010774981,0.00034988203,0.000024880663],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002794394,0.00031990884,0.014265245,0.08366827,0.00034841357,0.00007694636,0.0001380007,2.913253e-7,0.0008044103,0.012003877,0.00054519984,0.88755],"study_design_scores_gemma":[0.0006981517,0.0004871388,0.0049032457,0.008692359,0.0009265964,0.000030472636,0.000032781074,0.0000054211623,0.00010879491,0.004656352,0.97894585,0.0005128645],"about_ca_topic_score_codex":0.000010792341,"about_ca_topic_score_gemma":0.00016415246,"teacher_disagreement_score":0.97840065,"about_ca_system_score_codex":0.000046061265,"about_ca_system_score_gemma":0.00031479052,"threshold_uncertainty_score":0.9999988},"labels":[],"label_agreement":null},{"id":"W2962874894","doi":"10.3390/jof5030067","title":"Emerging Fungal Infections: New Patients, New Patterns, and New Pathogens","year":2019,"lang":"en","type":"review","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":354,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Microbiology","score_opus":0.05697115820610245,"score_gpt":0.3445708391717104,"score_spread":0.28759968096560795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2962874894","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00088351447,0.9963099,0.0006892779,0.00012959474,0.0011214524,0.00051934214,0.000028679811,0.00001621141,0.00030207812],"genre_scores_gemma":[0.00013510145,0.98853296,0.0005068098,0.00014847299,0.0022524851,7.937842e-7,0.000030475923,0.000060932587,0.00833196],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99727124,0.00010694222,0.0013375436,0.00034056447,0.00059076614,0.00035293231],"domain_scores_gemma":[0.9972053,0.00020325849,0.0011467774,0.00041755367,0.00022177046,0.00080534327],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00036667575,0.00044552566,0.0022398192,0.0003593366,0.00006433002,0.00006182862,0.00016834926,0.0003521498,0.0005153186],"category_scores_gemma":[0.0003745981,0.00031985517,0.0009984436,0.00028220192,0.000021326652,0.0002235153,0.000072697665,0.001056421,0.000088960944],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054322627,0.000098628,0.046542846,0.005819643,0.0003362637,0.00006770052,0.00006880173,1.6279934e-7,0.0000019843394,0.00001075306,0.03684117,0.91015774],"study_design_scores_gemma":[0.0011556917,0.00076550053,0.01271425,0.01960458,0.0028057834,0.00039083188,0.00003157491,6.7639684e-7,8.804223e-7,0.00003268704,0.9622243,0.0002732556],"about_ca_topic_score_codex":0.00009884501,"about_ca_topic_score_gemma":0.0000428151,"teacher_disagreement_score":0.9253831,"about_ca_system_score_codex":0.0002562358,"about_ca_system_score_gemma":0.0028179898,"threshold_uncertainty_score":0.9999254},"labels":[],"label_agreement":null},{"id":"W2963369706","doi":"10.1097/tp.0000000000002697","title":"Aerosolization of Second-generation Triazoles: In Vitro Evaluation and Application in Therapy of Invasive Airway Aspergillosis","year":2019,"lang":"en","type":"article","venue":"Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Voriconazole; Medicine; Posaconazole; Aerosolization; Aspergillosis; Galactomannan; Caspofungin; Aspergillus fumigatus; Regimen; Bronchoalveolar lavage; Gastroenterology; Surgery; Lung; Anesthesia; Internal medicine; Inhalation; Antifungal; Immunology; Dermatology","score_opus":0.023578664155243487,"score_gpt":0.2932395764669485,"score_spread":0.26966091231170497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2963369706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99737406,0.00024687,0.0008843166,0.000039313774,0.000024128329,0.0011342943,0.000016521813,0.000004955302,0.00027552646],"genre_scores_gemma":[0.99789816,0.0013835251,0.00016687615,0.000028457258,0.00001163331,0.0000393777,0.0004527297,0.0000066361636,0.000012610358],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990585,0.000091573595,0.0003785787,0.0001786361,0.00022382777,0.00006889391],"domain_scores_gemma":[0.9995457,0.00006469307,0.00012537953,0.00011509525,0.00013248067,0.000016687722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047448065,0.00007234728,0.00021126209,0.00016944179,0.000009105407,0.0000026084601,0.00002241999,0.000080457445,0.000049157985],"category_scores_gemma":[0.000023786746,0.00006838369,0.000028029852,0.00024479468,0.00002699351,0.00014737908,0.0000013228306,0.000053285272,0.0000018357282],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012436985,0.00008329697,0.2220904,0.00026521573,0.0000061420283,1.9564808e-7,0.0014572586,0.00019242144,0.76898503,0.00006453532,6.2313563e-7,0.005611219],"study_design_scores_gemma":[0.0028127476,0.00008478236,0.50213265,0.00006803684,0.000015307405,7.2835104e-7,0.00014285256,0.0032311054,0.49143183,0.00004211692,8.246831e-7,0.000036994337],"about_ca_topic_score_codex":0.00011737302,"about_ca_topic_score_gemma":0.0014864275,"teacher_disagreement_score":0.28004226,"about_ca_system_score_codex":0.00005173166,"about_ca_system_score_gemma":0.00008149016,"threshold_uncertainty_score":0.2788606},"labels":[],"label_agreement":null},{"id":"W2964577461","doi":"10.1590/0001-3765201920180654","title":"Candida albicans Clinical Isolates from a Southwest Brazilian Tertiary Hospital Exhibit MFS-mediated Azole Resistance Profile","year":2019,"lang":"en","type":"article","venue":"Anais da Academia Brasileira de Ciências","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; University of Toronto; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Candida albicans; Microbiology; Multiple drug resistance; Efflux; Fluconazole; Azole; Corpus albicans; Drug resistance; Biology; Major facilitator superfamily; Transporter; Gene; Antifungal; Genetics","score_opus":0.016320959275239577,"score_gpt":0.29921695200186166,"score_spread":0.2828959927266221,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2964577461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98835975,0.0014973345,0.00005691697,0.0017669878,0.00036946323,0.001239652,0.0004904343,0.0003194056,0.005900035],"genre_scores_gemma":[0.9870037,0.00019538053,0.00065945485,0.0054370803,0.0007626749,0.000060213737,0.000614556,0.00011264098,0.0051543163],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99506336,0.0002725866,0.0013561251,0.0014434446,0.00070490845,0.0011595914],"domain_scores_gemma":[0.9962998,0.0009027185,0.00042899916,0.0012587436,0.00024056569,0.00086914905],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.00097085634,0.0005920053,0.0011823076,0.00015861029,0.00020575983,0.00008712634,0.0005998971,0.0016654009,0.0026438816],"category_scores_gemma":[0.0015510606,0.0005416176,0.00052589993,0.0005871002,0.00047368644,0.00043413774,0.00017945703,0.0029332584,0.0018898755],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006717048,0.00030069062,0.9547423,0.0001304078,0.0001899173,0.00011959832,0.00088236056,6.2200826e-7,0.004391955,0.000056812696,0.037704773,0.0008088291],"study_design_scores_gemma":[0.0025682517,0.00034166765,0.9812628,0.0004922948,0.00019156268,0.000006431961,0.000927226,0.0002159891,0.0010541113,0.00010525029,0.012220514,0.0006139023],"about_ca_topic_score_codex":0.0013285128,"about_ca_topic_score_gemma":0.0019190324,"teacher_disagreement_score":0.02652047,"about_ca_system_score_codex":0.00036557054,"about_ca_system_score_gemma":0.0009263168,"threshold_uncertainty_score":0.9997035},"labels":[],"label_agreement":null},{"id":"W2967573308","doi":"10.1128/jcm.00884-19","title":"Identification of Candida auris by Use of the Updated Vitek 2 Yeast Identification System, Version 8.01: a Multilaboratory Evaluation Study","year":2019,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Centre intégré universitaire de santé et de services sociaux de l'Est-de-l'Île-de-Montréal; Institut National de Santé Publique du Québec; Centre Intégré Universitaire de Santé et de Services Sociaux du Centre-Sud-de-l'Île-de-Montréal; Hôpital Maisonneuve-Rosemont; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Candida auris; Biology; Microbiology; Clinical microbiology; Clade; Identification (biology); Yeast; Candida tropicalis; Antifungal; Genetics; Phylogenetics; Gene; Ecology","score_opus":0.040315647712168425,"score_gpt":0.3752044278056694,"score_spread":0.334888780093501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2967573308","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99759877,0.0001701693,0.000070558,0.0001312175,0.0011126967,0.000790203,0.00011305203,0.000004416788,0.0000089465675],"genre_scores_gemma":[0.9995886,0.000029248102,0.00003234755,0.00004482569,0.000056263154,0.0000018429964,0.000041397987,0.000008660965,0.00019678615],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9961146,0.00088147307,0.002422652,0.00022054976,0.0002516372,0.00010907002],"domain_scores_gemma":[0.99466103,0.000320174,0.0027544622,0.00048796603,0.0017175684,0.00005879042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004854621,0.00010069135,0.0006559252,0.000089406516,0.000034807028,0.000008631262,0.00018899357,0.00019684013,0.00007522003],"category_scores_gemma":[0.0017383003,0.00006528616,0.0002567732,0.00024836246,0.0001752656,0.00016539365,0.000038397073,0.0003172231,0.000023816881],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010604255,0.00056381844,0.37220317,0.00006495187,0.00011420815,6.506565e-7,0.00008481911,0.000009788271,0.6232913,0.0000034090115,0.0022867722,0.00031668463],"study_design_scores_gemma":[0.0036314484,0.0008495642,0.945447,0.00019991727,0.00057179877,0.000015963766,0.0011971198,0.0003132733,0.04680065,0.000004288765,0.00090087927,0.000068060675],"about_ca_topic_score_codex":0.000036159217,"about_ca_topic_score_gemma":0.00002812368,"teacher_disagreement_score":0.57649064,"about_ca_system_score_codex":0.00011682493,"about_ca_system_score_gemma":0.0003831579,"threshold_uncertainty_score":0.26622927},"labels":[],"label_agreement":null},{"id":"W2967890583","doi":"10.1093/jac/dkz344","title":"Matched-paired analysis of patients treated for invasive mucormycosis: standard treatment versus posaconazole new formulations (MoveOn)","year":2019,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Merck","keywords":"Posaconazole; Mucormycosis; Medicine; Internal medicine; Surgery; Dermatology; Antifungal; Amphotericin B","score_opus":0.018449121584643045,"score_gpt":0.288075606986123,"score_spread":0.26962648540147993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2967890583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976162,0.000067290006,0.00060032605,0.0006030803,0.00016528073,0.00061941025,0.00019523599,0.000010599206,0.0001225906],"genre_scores_gemma":[0.99602544,0.00033192438,0.0026066827,0.0002756682,0.00007838821,0.0000014123766,0.00011148094,0.000025418807,0.0005435798],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99854887,0.000023238208,0.0007387108,0.0001904628,0.00027638127,0.00022233273],"domain_scores_gemma":[0.9980842,0.0001673982,0.0006442405,0.00026077114,0.0006979524,0.00014546396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014597352,0.00020561363,0.0010261973,0.00033450263,0.00004553557,0.000017755097,0.00010331954,0.0001187026,0.00029686932],"category_scores_gemma":[0.00006153364,0.00015492011,0.00092937605,0.0004697139,0.00003924419,0.00016804697,0.000007346335,0.000085116575,0.000003846576],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.048911154,0.0012460107,0.734466,0.00011472895,0.007802009,0.0000049803953,0.0010475912,0.00012775905,0.19779995,0.000026424592,0.0032561696,0.005197225],"study_design_scores_gemma":[0.043624166,0.00820207,0.55417794,0.00022112964,0.004517472,0.000003773354,0.00023930354,0.00015124226,0.38619053,0.000039704562,0.002350477,0.0002821854],"about_ca_topic_score_codex":0.00006122796,"about_ca_topic_score_gemma":0.00011899341,"teacher_disagreement_score":0.18839057,"about_ca_system_score_codex":0.0003463726,"about_ca_system_score_gemma":0.0004941247,"threshold_uncertainty_score":0.6317459},"labels":[],"label_agreement":null},{"id":"W2969204814","doi":"10.1016/j.jcf.2019.07.011","title":"Omalizumab for asthma and allergic bronchopulmonary aspergillosis in adults with cystic fibrosis","year":2019,"lang":"en","type":"article","venue":"Journal of Cystic Fibrosis","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Michael's Hospital","funders":"Centre Hospitalier Universitaire Vaudois; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Canadian Lung Association","keywords":"Allergic bronchopulmonary aspergillosis; Medicine; Cystic fibrosis; Omalizumab; Asthma; Allergic asthma; Aspergillosis; Dermatology; Immunology; Immunoglobulin E; Internal medicine; Antibody","score_opus":0.00663786534377642,"score_gpt":0.23915388434294016,"score_spread":0.23251601899916374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969204814","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99520993,0.0024160803,0.00071284006,0.00044469518,0.00014188228,0.00061008625,0.00003181664,0.000014191776,0.00041845845],"genre_scores_gemma":[0.9831286,0.00016252956,0.01583326,0.00012690897,0.0001403579,0.000012633824,0.00001124536,0.000041375482,0.0005430652],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99787843,0.0000670463,0.00077195396,0.00035215748,0.0005333318,0.00039707212],"domain_scores_gemma":[0.9982091,0.000525233,0.00036906745,0.00031477673,0.00032171907,0.0002601085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000457258,0.00027367106,0.00083595887,0.00025658993,0.00006167567,0.000034112876,0.00013746838,0.00016563975,0.00016305868],"category_scores_gemma":[0.00032146942,0.00019695492,0.00023334574,0.00028330827,0.000109900095,0.00027161176,0.000035577934,0.00031536375,0.000012900963],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.09718629,0.0010105206,0.8273506,0.005920146,0.00048171644,0.00042812258,0.0015409292,0.00039728175,0.051695384,0.0002501717,0.0023339072,0.011404903],"study_design_scores_gemma":[0.009635747,0.007958303,0.9706663,0.0047998005,0.0002472035,0.0006653574,0.0009927065,0.0015359104,0.00088202365,0.0002253226,0.0020513504,0.0003399971],"about_ca_topic_score_codex":0.000044595043,"about_ca_topic_score_gemma":0.00005162781,"teacher_disagreement_score":0.14331564,"about_ca_system_score_codex":0.00018669092,"about_ca_system_score_gemma":0.00020770537,"threshold_uncertainty_score":0.8031589},"labels":[],"label_agreement":null},{"id":"W2969566064","doi":"10.1093/jac/dkz287","title":"Species distribution and antifungal susceptibility of invasive Candida isolates from Canadian hospitals: results of the CANWARD 2011–16 study","year":2019,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Shared Health; Western University; Hôpital Maisonneuve-Rosemont; University of Alberta; Alberta Health Services; London Health Sciences Centre","funders":"Pfizer Canada; Merck Canada; Astellas Pharma; Public Health Agency of Canada; Astellas Pharma US","keywords":"Micafungin; Candida glabrata; Candida parapsilosis; Fluconazole; Candida tropicalis; Microbiology; Candida krusei; Candida albicans; Candida dubliniensis; Biology; Broth microdilution; Anidulafungin; Corpus albicans; Antifungal; Minimum inhibitory concentration; Antibiotics","score_opus":0.007669534043475004,"score_gpt":0.23187839916682793,"score_spread":0.22420886512335292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969566064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966903,0.00018990449,0.000009152349,0.0013848952,0.0002944189,0.0005783763,0.0006616257,0.000003496688,0.00018787906],"genre_scores_gemma":[0.9989328,0.00040107602,0.00005859167,0.00017951483,0.00010538783,2.5750933e-7,0.000022809762,0.000014942085,0.00028462993],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982465,0.000112261594,0.00086560217,0.00024644277,0.0002949477,0.00023427868],"domain_scores_gemma":[0.99793583,0.00014842708,0.0007347204,0.00044028074,0.0005861535,0.00015456711],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006427475,0.00019081544,0.0007418724,0.0000823673,0.00006879311,0.000019632738,0.00021463384,0.00012412586,0.00020676639],"category_scores_gemma":[0.00022716419,0.00012635274,0.00025327125,0.00016998408,0.00027494298,0.00013315094,0.000031249412,0.00031016508,0.0000023774496],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001714585,0.0002525182,0.72543734,0.00006249906,0.00017901877,0.000005421172,0.0010242471,0.000001591355,0.26702127,0.000002766118,0.0041347104,0.00016405994],"study_design_scores_gemma":[0.0036054468,0.00083548384,0.8055884,0.00025683985,0.00009013368,0.000012738418,0.0013817555,0.0000024607148,0.18773271,0.000023151983,0.0003720651,0.000098784694],"about_ca_topic_score_codex":0.05589168,"about_ca_topic_score_gemma":0.118969746,"teacher_disagreement_score":0.0801511,"about_ca_system_score_codex":0.00025172494,"about_ca_system_score_gemma":0.00090219453,"threshold_uncertainty_score":0.9503952},"labels":[],"label_agreement":null},{"id":"W2970375531","doi":"10.1111/tid.13163","title":"The use of genome sequencing to investigate an outbreak of hospital‐acquired mucormycosis in transplant patients","year":2019,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Health Services; Public Health Agency of Canada; Provincial Laboratory of Public Health; University of Alberta","funders":"","keywords":"Mucormycosis; Outbreak; Medicine; Whole genome sequencing; Epidemiology; Genome; DNA sequencing; Internal medicine; Virology; Pathology; Genetics; Biology; Gene","score_opus":0.02174640220799315,"score_gpt":0.23750137606933494,"score_spread":0.2157549738613418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2970375531","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977448,0.00008844549,0.00007650249,0.000076499105,0.00013353645,0.0011784957,0.0005815897,0.0000388985,0.00008123204],"genre_scores_gemma":[0.999261,0.0002458802,0.00003830571,0.00020711678,0.000014339113,0.000027479304,0.00014473566,0.00002464258,0.000036500474],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99826837,0.00010075377,0.00058676826,0.00034315937,0.00036686225,0.00033410487],"domain_scores_gemma":[0.9986371,0.00014525623,0.00011604274,0.00053576607,0.00015617356,0.0004096662],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021635195,0.00020716127,0.0004208421,0.00013371052,0.000060478545,0.0000141999935,0.00012953824,0.00007015635,0.000031763488],"category_scores_gemma":[0.00007353161,0.00015230788,0.00016512281,0.00029590217,0.00012470435,0.00020502275,0.000010058011,0.00010886715,0.000015779477],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016931492,0.0006131548,0.98234135,0.0005588747,0.00005313696,0.000030401916,0.0023639624,0.00049383397,0.011496066,0.000047373647,0.0000066171515,0.000302073],"study_design_scores_gemma":[0.0015325684,0.0010058063,0.99483967,0.00045747988,0.00017212368,0.0000013728993,0.00006572226,0.00028302433,0.001348354,0.00003920445,0.000074897376,0.00017976144],"about_ca_topic_score_codex":0.001033366,"about_ca_topic_score_gemma":0.00094425067,"teacher_disagreement_score":0.012498328,"about_ca_system_score_codex":0.00012053874,"about_ca_system_score_gemma":0.00024411354,"threshold_uncertainty_score":0.6210935},"labels":[],"label_agreement":null},{"id":"W2971138656","doi":"10.1093/pch/pxz103","title":"A preterm neonate with diffuse rash at birth","year":2019,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Health Services; Izaak Walton Killam Health Centre; Alberta Children's Hospital; University of Calgary","funders":"","keywords":"Medicine; Umbilical cord; Rash; Neonatal intensive care unit; Obstetrics; Gestational age; Chorioamnionitis; Neonatal sepsis; Sepsis; Pregnancy; Pediatrics; Dermatology; Surgery; Immunology","score_opus":0.00872893608193219,"score_gpt":0.25354139170683415,"score_spread":0.24481245562490195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2971138656","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851741,0.0031315614,0.00008611752,0.004220905,0.00019848954,0.0011152544,0.000041536136,0.00012814469,0.005903895],"genre_scores_gemma":[0.98817664,0.002354231,0.0004644299,0.004669637,0.0003111383,0.000010721106,0.000053753007,0.000044472145,0.0039149686],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978641,0.0000688058,0.0003771886,0.0005333288,0.0005397551,0.0006167914],"domain_scores_gemma":[0.9984505,0.00010729224,0.00019599598,0.00067981076,0.00009576844,0.00047061846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000431833,0.00022773539,0.00052435865,0.0001257335,0.00019456318,0.000016717695,0.00012027493,0.000086724474,0.000253376],"category_scores_gemma":[0.00007030666,0.00016483651,0.0001242253,0.00040557008,0.0000587656,0.00007833119,0.000071442,0.00041940474,0.00041796162],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061603764,0.00020852142,0.99308026,0.00074401684,0.000024257784,0.000022703358,0.00046115564,0.0000021723565,0.000025437565,0.00018701419,0.0031022741,0.0015261255],"study_design_scores_gemma":[0.003911379,0.0008890623,0.9704874,0.0001308989,0.00003975077,0.00005142167,0.00009063629,0.000078644196,0.000032980035,0.000053172378,0.024011975,0.00022264937],"about_ca_topic_score_codex":0.00009735708,"about_ca_topic_score_gemma":0.00025990722,"teacher_disagreement_score":0.022592854,"about_ca_system_score_codex":0.00034174562,"about_ca_system_score_gemma":0.0004499749,"threshold_uncertainty_score":0.67218375},"labels":[],"label_agreement":null},{"id":"W2972034917","doi":"10.1101/754143","title":"Chromosomal rearrangements and loss of subtelomeric adhesins linked to clade-specific phenotypes in <i>Candida auris</i>","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Broad Institute; Canadian Institute for Advanced Research; U.S. Department of Health and Human Services","keywords":"Clade; Biology; Genetics; Genome; Gene; Evolutionary biology; Phylogenetics","score_opus":0.016112593428431365,"score_gpt":0.239431647628771,"score_spread":0.22331905420033965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972034917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99468493,0.0025843352,0.00011608993,0.0002308982,0.0005260875,0.0015340177,0.00018164063,0.00009649518,0.000045487413],"genre_scores_gemma":[0.996675,0.0012369036,0.0013915607,0.00023660176,0.0002563695,0.00007372884,0.0000010692274,0.00010067915,0.000028047516],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99678504,0.00011452237,0.0008071534,0.0011630524,0.00055167737,0.000578575],"domain_scores_gemma":[0.9974446,0.0000784993,0.00033258562,0.0014123322,0.00038675667,0.0003452094],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00047670223,0.00052256,0.0012059434,0.00039449456,0.000056732653,0.000054160384,0.00030898378,0.0005259464,0.00008299591],"category_scores_gemma":[0.00018543573,0.0005304435,0.0001567754,0.00068073755,0.00020669606,0.000098553624,0.00036417315,0.000761451,0.00007446589],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052249315,0.0002526878,0.45614797,0.0012982747,0.00008914071,0.00008581146,0.000044241362,0.0000095508885,0.5412276,0.00005516163,0.0002615229,0.0000055527166],"study_design_scores_gemma":[0.0013236897,0.00021233674,0.9491991,0.0014055101,0.00009367956,2.6546198e-8,0.000012391007,0.00002881318,0.044336874,0.0000015288643,0.0029191147,0.000466943],"about_ca_topic_score_codex":0.00012347191,"about_ca_topic_score_gemma":0.000022296614,"teacher_disagreement_score":0.49689072,"about_ca_system_score_codex":0.00033063712,"about_ca_system_score_gemma":0.0005850074,"threshold_uncertainty_score":0.99971473},"labels":[],"label_agreement":null},{"id":"W2975621535","doi":"10.1080/10428194.2019.1660977","title":"Granulocyte transfusions – bridging to allogeneic hematopoietic stem cell transplantation","year":2019,"lang":"en","type":"letter","venue":"Leukemia & lymphoma/Leukemia and lymphoma","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; BC Cancer Agency","funders":"","keywords":"Neutropenia; Medicine; Hematopoietic stem cell transplantation; Bridging (networking); Haematopoiesis; Granulocyte; Transplantation; Stem cell; Chemotherapy; Disease; Intensive care medicine; Immunology; Internal medicine; Biology","score_opus":0.0119281698805527,"score_gpt":0.23265665868198396,"score_spread":0.22072848880143126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2975621535","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9525736,0.0031370837,0.0015036399,0.031999994,0.001038074,0.002705108,0.00043956158,0.0004746872,0.006128274],"genre_scores_gemma":[0.6826612,0.0032730084,0.00038719195,0.28773543,0.0019942198,0.00021259279,0.0010885868,0.00039040914,0.022257378],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99259746,0.0002800024,0.0014667996,0.0024015056,0.0014937224,0.001760505],"domain_scores_gemma":[0.9964403,0.0004947844,0.00038127243,0.0017690662,0.000267406,0.00064715487],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.00047698486,0.001539583,0.0022694839,0.00067033246,0.00052063446,0.00021067372,0.0006068574,0.0022910817,0.000174968],"category_scores_gemma":[0.0000259513,0.0014517173,0.0009157921,0.0007544968,0.0003126511,0.00026598002,0.000117213945,0.0008926526,0.00063369126],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036591191,0.0003525745,0.011145083,0.018607365,0.0007576871,0.011750842,0.00685271,0.00010311277,0.02968501,0.00008234219,0.7879755,0.12902866],"study_design_scores_gemma":[0.02799621,0.0015148337,0.10960486,0.0052323877,0.0042622834,0.0057026716,0.0010702948,0.00093328446,0.023429027,0.00013973564,0.8151925,0.004921894],"about_ca_topic_score_codex":0.0009896333,"about_ca_topic_score_gemma":0.00013142238,"teacher_disagreement_score":0.2699124,"about_ca_system_score_codex":0.0061874953,"about_ca_system_score_gemma":0.0048259054,"threshold_uncertainty_score":0.9997353},"labels":[],"label_agreement":null},{"id":"W29776286","doi":"","title":"Itraconazole (Sporanox®) for vulvovaginal candidiasis.","year":2002,"lang":"en","type":"article","venue":"PubMed","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Itraconazole; Etiology; Candida albicans; Medicine; Antibiotics; Pregnancy; Vulvovaginal Candidiasis; Dermatology; Nystatin; Antifungal; Immunology; Biology; Internal medicine; Microbiology","score_opus":0.05908893795158476,"score_gpt":0.2504386751255961,"score_spread":0.19134973717401133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W29776286","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9554534,0.0017829025,0.000520247,0.004455645,0.00027374315,0.0018962617,0.00003468702,0.000121891375,0.035461225],"genre_scores_gemma":[0.9845729,0.00006623216,0.00024557312,0.0009418142,0.00023593573,0.00082780916,0.000012461878,0.000015143465,0.013082165],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9990091,0.0000106985935,0.00017732831,0.00023552828,0.00017372191,0.00039366086],"domain_scores_gemma":[0.999388,0.000056507728,0.00003757081,0.00023963595,0.000078980476,0.00019929754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022555425,0.00010159862,0.00021817004,0.000044920806,0.00006848196,0.00001781558,0.00006060618,0.000064638065,0.00030726317],"category_scores_gemma":[0.00018598046,0.000086181564,0.000115551404,0.00010676727,0.00006221065,0.00008958489,0.000008935303,0.00009294855,0.000044252392],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080147403,0.0005905813,0.29682887,0.0003552763,0.00013951871,0.000066786444,0.00026750614,0.00000104765,0.0004917887,0.0010398037,0.089712426,0.6097049],"study_design_scores_gemma":[0.0015061335,0.000050284074,0.9121436,0.000008549405,0.000073263895,0.000012934096,0.000071836956,0.000082016864,0.0011527749,0.00019714236,0.08458273,0.0001187468],"about_ca_topic_score_codex":0.000019727277,"about_ca_topic_score_gemma":0.00003578659,"teacher_disagreement_score":0.6153147,"about_ca_system_score_codex":0.00006625233,"about_ca_system_score_gemma":0.000017452316,"threshold_uncertainty_score":0.35143822},"labels":[],"label_agreement":null},{"id":"W2978048836","doi":"10.1177/1078155219876683","title":"Voriconazole prophylaxis in leukemic patients: A retrospective single-center study","year":2019,"lang":"en","type":"article","venue":"Journal of Oncology Pharmacy Practice","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Health Sciences Centre; Institute for Clinical Evaluative Sciences; Sunnybrook Health Science Centre","funders":"","keywords":"Voriconazole; Medicine; Posaconazole; Internal medicine; Incidence (geometry); Fluconazole; Retrospective cohort study; Myeloid leukemia; Acute leukemia; Leukemia; Surgery; Antifungal; Dermatology","score_opus":0.028973254345573834,"score_gpt":0.3749430525480026,"score_spread":0.34596979820242874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2978048836","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98537916,0.0001486141,0.0000098928485,0.001153434,0.000823122,0.00092676247,0.0000025940174,0.00000840507,0.0115480395],"genre_scores_gemma":[0.9976867,0.00008461582,0.00034408932,0.0012356262,0.00020058996,0.000005885039,0.0000014376576,0.000017420125,0.00042366443],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99759316,0.00052488537,0.00081949146,0.00025234805,0.0005441766,0.00026592685],"domain_scores_gemma":[0.99712455,0.0005400588,0.0009128652,0.00021125551,0.0010696795,0.00014160718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016503412,0.0001563786,0.0006263514,0.00022224907,0.000035242105,0.000016660704,0.00014943676,0.00007916293,0.00033230166],"category_scores_gemma":[0.002094856,0.00012330868,0.00013442348,0.00033998082,0.00005543691,0.0009001008,0.00005515091,0.0012608551,0.00010469563],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012076123,0.016220631,0.95720583,0.000036601094,0.00020026838,0.00064550043,0.0013660691,0.0000026175287,0.006266875,0.0000057619827,0.00088496506,0.0050887386],"study_design_scores_gemma":[0.03067728,0.01851913,0.9006135,0.00007444105,0.00027074662,0.00045204096,0.0038462325,0.000020081758,0.00035105308,0.000019980147,0.045016147,0.00013937886],"about_ca_topic_score_codex":0.000034332505,"about_ca_topic_score_gemma":0.000022727801,"teacher_disagreement_score":0.05659236,"about_ca_system_score_codex":0.0019951158,"about_ca_system_score_gemma":0.0006952602,"threshold_uncertainty_score":0.5477858},"labels":[],"label_agreement":null},{"id":"W2980032979","doi":"10.1128/aac.01626-19","title":"Amphotericin B Penetrates into the Central Nervous System through Focal Disruption of the Blood-Brain Barrier in Experimental Hematogenous <i>Candida</i> Meningoencephalitis","year":2019,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Sick Kids Foundation","keywords":"Candida albicans; Meningoencephalitis; In vivo; Blood–brain barrier; Cerebrospinal fluid; Amphotericin B; Pathology; Evans Blue; In vitro; Central nervous system; Bolus (digestion); Medicine; Biology; Microbiology; Surgery; Antifungal; Internal medicine","score_opus":0.007148587216021794,"score_gpt":0.24771030928452922,"score_spread":0.24056172206850743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980032979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971293,0.00022291086,0.00002427686,0.0014135884,0.00015692164,0.00067520596,0.000010438241,0.000016272534,0.00035104758],"genre_scores_gemma":[0.9954303,0.00018464925,0.00007938683,0.0038256713,0.00005918169,0.0000073986935,0.00000860291,0.00002195496,0.00038283528],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987651,0.00008005875,0.000340259,0.00030504397,0.00020659782,0.0003029428],"domain_scores_gemma":[0.99944687,0.000033377266,0.00011599668,0.00032288153,0.000029353025,0.00005153865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015351501,0.00018955489,0.00034860714,0.0000200578,0.00012067143,0.00003113512,0.00015146141,0.00009093619,0.00011426909],"category_scores_gemma":[0.000006464847,0.00010910458,0.00013884071,0.00015989188,0.00021106421,0.00008595074,0.000044438413,0.00013234475,0.000003735286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003823739,0.0002519857,0.42416933,0.00021536779,0.000068638685,0.000012305694,0.0108006885,0.000003154492,0.5626276,0.00022759975,0.0007190986,0.0005218762],"study_design_scores_gemma":[0.0033738406,0.00032484112,0.48165625,0.0004987787,0.000050222192,0.00010113298,0.004731188,0.00010006321,0.50721866,0.000029255427,0.0016986873,0.00021709135],"about_ca_topic_score_codex":0.0016066382,"about_ca_topic_score_gemma":0.00013806365,"teacher_disagreement_score":0.057486918,"about_ca_system_score_codex":0.00006618879,"about_ca_system_score_gemma":0.000059044884,"threshold_uncertainty_score":0.44491553},"labels":[],"label_agreement":null},{"id":"W2980178991","doi":"10.1182/blood.v118.21.4567.4567","title":"Reduced Incidence of Early Invasive Fungal Infection in Allogeneic Transplant Patients Following Micafungin Prophylaxis","year":2011,"lang":"en","type":"article","venue":"Blood","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Cancer Agency; Vancouver Hospital and Health Sciences Centre; Leukemia & Lymphoma Society of Canada; Vancouver Coastal Health; University of British Columbia","funders":"","keywords":"Medicine; Incidence (geometry); Micafungin; Internal medicine; Cumulative incidence; Transplantation; Population; Hematopoietic stem cell transplantation; Alemtuzumab; Cohort; Neutropenia; Retrospective cohort study; Surgery; Pediatrics; Chemotherapy; Amphotericin B; Antifungal","score_opus":0.020599358465035834,"score_gpt":0.24103973005809232,"score_spread":0.2204403715930565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980178991","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987652,0.00011325574,0.000015419479,0.0000038735293,0.0000842941,0.00045001417,0.000007833197,0.00002161496,0.0005385022],"genre_scores_gemma":[0.9995576,0.000052962896,0.00027680304,0.00001910125,0.000018457004,0.00001820106,0.00001007378,0.000012577532,0.000034209585],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99887884,0.00005971103,0.00034432186,0.00026209315,0.00024558228,0.00020946765],"domain_scores_gemma":[0.99948406,0.00003946934,0.00008364502,0.00023057833,0.000085789645,0.00007646741],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019300189,0.00012230381,0.00028306845,0.00012028439,0.000027139882,0.0000032020516,0.00006838824,0.00011432767,0.000028266797],"category_scores_gemma":[0.00019159957,0.00010743629,0.00013759044,0.0002507393,0.00004686109,0.00011057781,0.00001624207,0.00016658094,0.0000107665455],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032833236,0.00095306645,0.8734265,0.00012302324,0.00004981605,0.00006600432,0.0014767731,1.3367462e-7,0.12325363,0.000007670263,0.0000015465847,0.00031349168],"study_design_scores_gemma":[0.001567099,0.0010209113,0.8139608,0.0002550637,0.00009334062,0.000003641975,0.000023869183,4.293598e-7,0.18295395,0.00003794728,6.523197e-7,0.000082308004],"about_ca_topic_score_codex":0.00087916764,"about_ca_topic_score_gemma":0.00072589604,"teacher_disagreement_score":0.05970032,"about_ca_system_score_codex":0.00003382399,"about_ca_system_score_gemma":0.00013033401,"threshold_uncertainty_score":0.43811247},"labels":[],"label_agreement":null},{"id":"W2980264725","doi":"10.1111/all.14087","title":"The presence of <i>Aspergillus fumigatus</i> in asthmatic airways is not clearly related to clinical disease severity","year":2019,"lang":"en","type":"article","venue":"Allergy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"University College Cork; Science Foundation Ireland; Teva Pharmaceutical Industries","keywords":"Aspergillus fumigatus; Bronchoalveolar lavage; Immunology; Medicine; Immunoglobulin E; Asthma; Aspergillus; Allergic bronchopulmonary aspergillosis; Sensitization; Allergy; Galactomannan; Aspergillosis; Microbiology; Lung; Internal medicine; Biology; Antibody","score_opus":0.015988864279026377,"score_gpt":0.30733496076209466,"score_spread":0.2913460964830683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980264725","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920114,0.0002605846,0.000009240949,0.004123048,0.00022506498,0.00047930967,0.0000127789435,0.000023197563,0.002855347],"genre_scores_gemma":[0.99238724,0.0003189923,0.00009545025,0.0014061515,0.000026027967,0.000008325369,0.0000054841985,0.0000148829495,0.005737476],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981847,0.00014416651,0.0006311771,0.00035937838,0.0003944173,0.00028618562],"domain_scores_gemma":[0.99827725,0.0004398626,0.00009355111,0.00081341504,0.000115598115,0.00026032334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006980985,0.00012581883,0.00036454826,0.000032830874,0.000046944944,0.000010680572,0.000212677,0.00010400147,0.00026093711],"category_scores_gemma":[0.00085740647,0.00008691765,0.0001704563,0.0002595713,0.00015425889,0.00007457882,0.00010697747,0.00030396594,0.00027836498],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005723885,0.0006477712,0.9637449,0.00021976855,0.00014018985,0.00007002758,0.0011483704,0.0000473809,0.0013559996,0.002154369,0.00931954,0.0154278325],"study_design_scores_gemma":[0.0009097831,0.0003058006,0.9739208,0.00018051865,0.000012366543,0.0000011845086,0.000178879,0.0007358028,0.0001647881,0.00033233885,0.023153778,0.00010396312],"about_ca_topic_score_codex":0.0001599353,"about_ca_topic_score_gemma":0.00033963256,"teacher_disagreement_score":0.015323869,"about_ca_system_score_codex":0.000039337618,"about_ca_system_score_gemma":0.00019500834,"threshold_uncertainty_score":0.35779116},"labels":[],"label_agreement":null},{"id":"W2980297967","doi":"10.1182/blood.v114.22.1136.1136","title":"High Incidence of Invasive Fungal Infections in Adult Patients Undergoing Hematopoietic Stem Cell Transplantation.","year":2009,"lang":"en","type":"article","venue":"Blood","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Leukemia & Lymphoma Society of Canada; Vancouver Coastal Health; Providence Health Care","funders":"","keywords":"Medicine; Hematopoietic stem cell transplantation; Internal medicine; Incidence (geometry); Transplantation; Cumulative incidence; Chronic lymphocytic leukemia; Surgery; Fluconazole; Leukemia; Multiple myeloma; Population; Antifungal","score_opus":0.007760450464512809,"score_gpt":0.22874060336092725,"score_spread":0.22098015289641443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980297967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984251,0.00007846247,0.000111858804,0.000072470655,0.00003480698,0.00025829565,0.000011154884,0.000021351929,0.0009864988],"genre_scores_gemma":[0.9993346,0.00021561969,0.00020165642,0.00012867239,0.000015750631,0.0000052187024,0.000014709055,0.00000607814,0.00007770196],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990962,0.000036643152,0.00031591882,0.00018330818,0.00021692629,0.00015100051],"domain_scores_gemma":[0.99938935,0.00014565319,0.00008436441,0.0001726251,0.00014783775,0.00006014691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000074581265,0.00009568627,0.0002198874,0.00008693033,0.000037410577,0.0000051163497,0.000049018014,0.00006768137,0.0000206798],"category_scores_gemma":[0.00006728552,0.00008903247,0.000060450202,0.00023252435,0.000033525695,0.000098713186,0.000005673267,0.0001286461,0.000011361669],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009428974,0.0016462646,0.99055636,0.00044592243,0.000010982846,0.00004101787,0.0009715377,0.000014439974,0.0056499895,0.0003320058,0.000015751692,0.00022146145],"study_design_scores_gemma":[0.0039258613,0.0007213447,0.9267691,0.0004687889,0.000107985295,0.0000134315305,0.00032867174,0.0000024794076,0.06731354,0.00026090845,6.0670556e-7,0.00008729714],"about_ca_topic_score_codex":0.000061681196,"about_ca_topic_score_gemma":0.00076095865,"teacher_disagreement_score":0.063787244,"about_ca_system_score_codex":0.000032180913,"about_ca_system_score_gemma":0.00014981435,"threshold_uncertainty_score":0.3630639},"labels":[],"label_agreement":null},{"id":"W2980460186","doi":"10.1182/blood.v118.21.4265.4265","title":"Retrospective Review of Invasive Fungal Disease in a Cohort of Patients with Acute Leukemia","year":2011,"lang":"en","type":"article","venue":"Blood","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Medicine; Internal medicine; Posaconazole; Neutropenia; Acute leukemia; Leukemia; Retrospective cohort study; Fluconazole; Induction chemotherapy; Chemotherapy regimen; Febrile neutropenia; Regimen; Hematopoietic stem cell transplantation; Oncology; Intensive care medicine; Transplantation; Chemotherapy; Amphotericin B; Antifungal","score_opus":0.010733384846135832,"score_gpt":0.23504055355113046,"score_spread":0.22430716870499462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980460186","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948218,0.0018197383,0.0000037378377,0.000009332931,0.000010626723,0.00066394213,0.00007032311,0.0000066213483,0.0025938866],"genre_scores_gemma":[0.9977044,0.0018843944,0.00019681542,0.00009304398,0.00000736232,0.000016107926,0.000025068412,0.000008764761,0.00006408299],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990888,0.000030358555,0.00028308036,0.0001968959,0.0002815639,0.000119284785],"domain_scores_gemma":[0.99913865,0.000015591633,0.0001443828,0.00032789973,0.00028124414,0.00009221883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013436312,0.00009349134,0.0004375923,0.00004008748,0.000008941595,5.9483347e-7,0.000060949646,0.000031740907,0.00012874717],"category_scores_gemma":[0.0002782738,0.00006690758,0.00007351956,0.00019719944,0.0001098413,0.000050945207,0.000022743765,0.000100331374,0.0000030666736],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008911057,0.00085356133,0.9952477,0.0023827136,0.00015254888,0.00007360011,0.00013689754,9.1837595e-9,0.00012312207,0.0000621687,0.000044047138,0.000032476128],"study_design_scores_gemma":[0.0019946655,0.00049230934,0.98990285,0.0044041057,0.0006912435,7.645754e-7,0.000015710933,1.949535e-7,0.002380507,0.00005135276,0.0000030862993,0.0000631792],"about_ca_topic_score_codex":0.00007796014,"about_ca_topic_score_gemma":0.000068875364,"teacher_disagreement_score":0.0053448696,"about_ca_system_score_codex":0.00006089996,"about_ca_system_score_gemma":0.00036076264,"threshold_uncertainty_score":0.2728412},"labels":[],"label_agreement":null},{"id":"W2981008872","doi":"10.1016/j.injury.2019.10.027","title":"Severe fungal infections following blunt traumatic injuries: A 5-year multicenter descriptive study","year":2019,"lang":"en","type":"article","venue":"Injury","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Naval Medical Research Center; City, University of London; Western University","keywords":"Medicine; Injury Severity Score; Leukocytosis; Amputation; Population; Surgery; Retrospective cohort study; Blunt trauma; Injury prevention; Poison control; Emergency medicine","score_opus":0.018016027843972483,"score_gpt":0.3029895875370516,"score_spread":0.2849735596930791,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981008872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99111485,0.00005160038,0.00004290905,0.00007331209,0.0005147631,0.0014024333,0.000018121222,0.00011499439,0.006666995],"genre_scores_gemma":[0.9965554,0.000004524497,0.000198483,0.00019464623,0.0000876828,0.00004344304,0.0000065559957,0.000028723547,0.0028805346],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99850637,0.00009595429,0.00035095523,0.00037630383,0.00036173264,0.00030868422],"domain_scores_gemma":[0.9991036,0.0000874601,0.00006644838,0.00050974137,0.000100384874,0.00013233189],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032706518,0.000194506,0.00040788113,0.00011291043,0.00011519648,0.00003637976,0.000088907844,0.00009118082,0.0006233476],"category_scores_gemma":[0.00019356293,0.00016330535,0.00024354462,0.00024098837,0.000045560755,0.00022482172,0.00005564728,0.0003416761,0.0008453453],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005616693,0.0012768195,0.98944193,0.000088402754,0.00022583641,0.000024869492,0.004780505,0.0000010165189,0.0023417654,0.000030277322,0.0004937266,0.00073318894],"study_design_scores_gemma":[0.0026796844,0.0023273132,0.96796083,0.00025706994,0.00027452406,0.000005167708,0.024983462,0.000059339516,0.00043936874,0.000048213285,0.0007091814,0.0002558127],"about_ca_topic_score_codex":0.00014272868,"about_ca_topic_score_gemma":0.000158553,"teacher_disagreement_score":0.02148106,"about_ca_system_score_codex":0.00021569028,"about_ca_system_score_gemma":0.00012704747,"threshold_uncertainty_score":0.9999326},"labels":[],"label_agreement":null},{"id":"W2981184925","doi":"10.6002/ect.2019.0105","title":"Pulmonary Blastomycosis Following Eculizumab Therapy in a Lung Transplant Recipient","year":2019,"lang":"en","type":"article","venue":"Experimental and Clinical Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; Institute of Aging; University Health Network","funders":"","keywords":"Medicine; Eculizumab; Lung; Blastomycosis; Renal transplant; Surgery; Dermatology; Internal medicine; Immunology; Transplantation; Complement system; Immune system","score_opus":0.02375827150132936,"score_gpt":0.3491719674459095,"score_spread":0.32541369594458014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981184925","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946066,0.0014123302,0.000080939266,0.00011209074,0.00022837121,0.00055157096,0.000009894398,0.000030019291,0.0029681686],"genre_scores_gemma":[0.9968061,0.0024539856,0.00015896048,0.00027148053,0.000041260348,0.000021469416,0.000068609756,0.000013020814,0.00016511082],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986596,0.00008214162,0.00045974788,0.00038926047,0.00021821188,0.00019103948],"domain_scores_gemma":[0.99957836,0.0001267768,0.000040214196,0.00013322858,0.000010664925,0.00011075748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002820912,0.00014332865,0.00033163434,0.000052122163,0.00004072352,0.000012011105,0.00004298695,0.00011735166,0.00015606465],"category_scores_gemma":[0.0000047835565,0.00011618756,0.00021118882,0.0001066673,0.00004869714,0.0001262424,0.0000044582694,0.00019336486,0.00002480298],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004319233,0.0007457549,0.9278271,0.00008551905,0.00005596436,0.00022254998,0.0010245059,0.0000010884307,0.0614853,0.00005428445,0.000004363197,0.0041743075],"study_design_scores_gemma":[0.005227017,0.00093478744,0.97476315,0.00036480496,0.000050697647,0.000054300897,0.00069040706,0.00057864294,0.017086437,0.00002176544,0.000052517564,0.00017544196],"about_ca_topic_score_codex":0.00004770911,"about_ca_topic_score_gemma":0.000012742357,"teacher_disagreement_score":0.04693605,"about_ca_system_score_codex":0.000044748216,"about_ca_system_score_gemma":0.00003150384,"threshold_uncertainty_score":0.4737991},"labels":[],"label_agreement":null},{"id":"W2981393896","doi":"10.1093/ofid/ofz360.1796","title":"2116. Comparative Effectiveness of Amphotericin B, Azoles, and Echinocandins in the Treatment of Candidemia and Invasive Candidiasis: A Systematic Review and Network Meta-Analysis","year":2019,"lang":"en","type":"review","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Amphotericin B; Medicine; Echinocandins; Echinocandin; Randomized controlled trial; Meta-analysis; Internal medicine; Fluconazole; Intensive care medicine; Antifungal; Caspofungin","score_opus":0.10950620853779494,"score_gpt":0.39837286902152597,"score_spread":0.288866660483731,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981393896","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0039023126,0.98423314,0.00000564076,0.000014026189,0.0000142464705,0.011216305,0.00042286006,0.0000054357124,0.0001860552],"genre_scores_gemma":[0.25619653,0.74270314,0.0000034895231,0.000075555196,0.0000045573797,0.00085966865,0.00012003435,0.000013723217,0.000023290277],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99610734,0.0018679905,0.0010157492,0.00054654275,0.0002146126,0.00024775192],"domain_scores_gemma":[0.9956778,0.002525707,0.0009027209,0.00066904485,0.000096527765,0.00012815188],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00087832264,0.0005148169,0.011806651,0.00019057025,0.0000931306,0.000059725648,0.00016186183,0.0001227048,0.000020576232],"category_scores_gemma":[0.00018795718,0.00026024517,0.0010667245,0.0008089269,0.00022265232,0.00011050688,0.000099678575,0.00013021246,9.218516e-7],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011583437,0.0004303832,0.06633708,0.86228,0.069660835,0.000016698312,0.00023460375,0.0000032785913,1.1302414e-7,0.00011087099,0.000048330614,0.0007619641],"study_design_scores_gemma":[0.00092925143,0.001138588,0.01630379,0.107554235,0.8728608,0.000045903616,0.0003043989,0.000003462529,8.9825267e-7,0.000079063895,0.0004850955,0.00029450786],"about_ca_topic_score_codex":0.0029370172,"about_ca_topic_score_gemma":0.006342261,"teacher_disagreement_score":0.80319995,"about_ca_system_score_codex":0.00017558993,"about_ca_system_score_gemma":0.00038098014,"threshold_uncertainty_score":0.999985},"labels":[],"label_agreement":null},{"id":"W2981494509","doi":"10.1101/816082","title":"Broad-Spectrum Antifungal Activities and Mechanism of Drimane Sesquiterpenoids","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Johnson Cancer Research Center, Kansas State University; National Institutes of Health; King Saud University; University of Missouri-Kansas City; Merck Sharp and Dohme; University of Kansas; Kansas IDeA Network of Biomedical Research Excellence; University of Nebraska Medical Center","keywords":"Corpus albicans; Candida albicans; Biology; Microbiology; Cryptococcus neoformans; Mutant; Gene; Biochemistry","score_opus":0.01186407430982401,"score_gpt":0.23320359625116402,"score_spread":0.22133952194134002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981494509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942462,0.0017166694,0.0014849583,0.00019052418,0.0007490733,0.0010318442,0.00028077833,0.00020551911,0.00009447667],"genre_scores_gemma":[0.99688095,0.00082507,0.0015938062,0.00016250521,0.0002802411,0.000036503636,7.5145783e-7,0.00012353844,0.000096657095],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968855,0.0001123675,0.0006548057,0.0011440086,0.00061232515,0.00059104164],"domain_scores_gemma":[0.9972278,0.0001069516,0.00045964593,0.0016415857,0.00027972492,0.00028431055],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00064031535,0.0006152731,0.0013314077,0.0003115427,0.00009999602,0.000092894465,0.00029372884,0.00069016597,0.00014179821],"category_scores_gemma":[0.00016415433,0.00061029254,0.0002642865,0.00026703507,0.0003044255,0.00017311164,0.00054629386,0.0009928488,0.000028880053],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033868093,0.0002666933,0.08650035,0.003386975,0.00029846135,0.000079104495,0.000026886273,0.0000028435586,0.9053627,0.0035651026,0.00016931549,0.0000028905956],"study_design_scores_gemma":[0.0010183959,0.0003223893,0.38493696,0.001262349,0.00037489308,9.710283e-8,0.000019734629,0.00023764116,0.61061543,0.000018969567,0.0005428391,0.00065028755],"about_ca_topic_score_codex":0.0000774384,"about_ca_topic_score_gemma":0.0000055818796,"teacher_disagreement_score":0.2984366,"about_ca_system_score_codex":0.00022150448,"about_ca_system_score_gemma":0.00081534224,"threshold_uncertainty_score":0.99963486},"labels":[],"label_agreement":null},{"id":"W2982967984","doi":"10.1093/ofid/ofz229","title":"A 7-Year-Old Child With Headaches and Prolonged Fever Associated With Oral and Nail Lesions","year":2019,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Medicine; Headaches; Fluconazole; Context (archaeology); Vomiting; Magnetic resonance imaging; Candida albicans; Cerebrospinal fluid; Meningoencephalitis; Pathology; Dermatology; Gastroenterology; Internal medicine; Surgery; Radiology; Antifungal","score_opus":0.009467179702343476,"score_gpt":0.2510859905176116,"score_spread":0.24161881081526812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982967984","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98905253,0.00030093672,0.000006245492,0.0006761636,0.000015000274,0.0011829997,0.000048147707,0.000062399326,0.008655584],"genre_scores_gemma":[0.9962687,0.00004268332,0.000026423359,0.00064149086,0.000008781689,0.000045203305,0.000047492395,0.000026107497,0.0028931096],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998994,0.000047137502,0.000119855904,0.00037402342,0.00019271966,0.00027227547],"domain_scores_gemma":[0.9993136,0.000060408092,0.00006827903,0.00025524915,0.000086889755,0.00021560084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010439621,0.00017681505,0.0003600701,0.00004175617,0.0002356066,0.00011720782,0.00006011316,0.00006406027,0.00015239896],"category_scores_gemma":[0.00011227731,0.00011435025,0.00003433226,0.0001602014,0.00017402347,0.00027553822,0.00009867905,0.000151113,0.000013598077],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009288097,0.0003680092,0.9967808,0.000059542017,0.00015747106,0.000023790064,0.000058311172,0.0000011427808,0.000023004312,0.00026502932,0.000605914,0.0007281928],"study_design_scores_gemma":[0.0036978812,0.001355493,0.9932723,0.0002976819,0.0002248847,0.000044269775,0.00037840524,0.000021162667,0.000029258177,0.00012369086,0.00037264836,0.00018230775],"about_ca_topic_score_codex":0.00036709404,"about_ca_topic_score_gemma":0.0047789146,"teacher_disagreement_score":0.0072161853,"about_ca_system_score_codex":0.000048712736,"about_ca_system_score_gemma":0.00013151168,"threshold_uncertainty_score":0.4663068},"labels":[],"label_agreement":null},{"id":"W2987020709","doi":"10.1007/s40506-019-00205-5","title":"Treatment of Non-Aspergillus Mold Infections: a Focus on Mucormycosis and Fusariosis","year":2019,"lang":"en","type":"article","venue":"Current treatment options in infectious diseases/Current treatment options in infectious disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; University Health Network","funders":"","keywords":"Posaconazole; Fusariosis; Mucormycosis; Medicine; Voriconazole; Amphotericin B; Zygomycosis; Aspergillosis; Intensive care medicine; Antifungal; Dermatology; Surgery; Immunology; Biology; Fusarium","score_opus":0.020697077614028135,"score_gpt":0.31769433116049345,"score_spread":0.29699725354646533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2987020709","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97260296,0.015720371,0.000097457196,0.00016443503,0.0017035253,0.0065095,0.0012239715,0.00037302123,0.0016047475],"genre_scores_gemma":[0.9247993,0.06907304,0.00003743027,0.000016330687,0.0002048322,0.0047004526,0.00082606275,0.000109935245,0.00023260366],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99434185,0.00037780075,0.0015326441,0.0019625672,0.00066469214,0.0011204415],"domain_scores_gemma":[0.9958713,0.0005598704,0.00044632624,0.0017732632,0.0002938853,0.0010553504],"candidate_categories":["metaepi_narrow"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.00014248931,0.0014531018,0.0018070355,0.0024114433,0.00046205556,0.00012760071,0.00014799512,0.0002656946,0.00040812834],"category_scores_gemma":[0.00017855632,0.0012294102,0.0012483015,0.0019752884,0.0004050046,0.0004972104,0.000082413426,0.00036018723,0.0002848357],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009681415,0.07839158,0.8377769,0.00037860227,0.0005817455,0.00007102366,0.0003857826,0.0023675482,0.000057311372,0.0023890347,0.000029080906,0.07660325],"study_design_scores_gemma":[0.026424404,0.016433304,0.9449986,0.0012244717,0.0027613442,0.000054203272,0.00021279525,0.0028891156,0.00008729777,0.0014866857,0.0022777244,0.00115003],"about_ca_topic_score_codex":0.001028723,"about_ca_topic_score_gemma":0.0012994941,"teacher_disagreement_score":0.10722173,"about_ca_system_score_codex":0.007908384,"about_ca_system_score_gemma":0.001024173,"threshold_uncertainty_score":0.99982184},"labels":[],"label_agreement":null},{"id":"W2987248752","doi":"10.1016/s1473-3099(19)30312-3","title":"Global guideline for the diagnosis and management of mucormycosis: an initiative of the European Confederation of Medical Mycology in cooperation with the Mycoses Study Group Education and Research Consortium","year":2019,"lang":"en","type":"review","venue":"The Lancet Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1756,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; European Research Council; Deutsche Gesellschaft für Epileptologie; Basilea Pharmaceutica; Astellas Pharma; Agenzia Spaziale Italiana; Teva Pharmaceutical Industries; Meso Scale Diagnostics; Les Laboratories Pierre Fabre; Deutsches Zentrum für Infektionsforschung; University of Leeds; Roche; Charitable Leadership Foundation; AstraZeneca; Chiesi Farmaceutici; GlaxoSmithKline Australia; European Commission; Bundesministerium für Bildung und Forschung; Merck KGaA; Bayer; Gilead Sciences; Deutsches Zentrum für Lungenforschung; 3M; Pfizer; Covidien; Physicians' Services Incorporated Foundation; Novartis","keywords":"Mucormycosis; Guideline; Posaconazole; Medicine; Disease; Intervention (counseling); Intensive care medicine; Amphotericin B; Multidisciplinary approach; Medical mycology; Surgery; Antifungal; Pathology; Dermatology; Political science","score_opus":0.13845565104651142,"score_gpt":0.45941529037736845,"score_spread":0.320959639330857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2987248752","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18130559,0.8059502,0.00013534339,0.001411617,0.00013039784,0.010037825,0.00024432875,0.000014585901,0.000770074],"genre_scores_gemma":[0.5465919,0.45280442,0.000004014458,0.000116497096,0.000076221724,0.00036142653,0.00003246617,0.000007695327,0.000005382617],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99676305,0.001852414,0.00054743205,0.00024652548,0.00044738664,0.000143209],"domain_scores_gemma":[0.9973969,0.001267679,0.0003610213,0.00051728403,0.00041825202,0.000038895287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028965753,0.00015585372,0.00074102666,0.00004665515,0.00017920643,0.000026899908,0.00023781868,0.00005986615,0.000011381852],"category_scores_gemma":[0.0006318244,0.000060447626,0.000073021896,0.00026819154,0.0006165102,0.000052592568,0.0001366156,0.00019152307,2.786744e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007236176,0.0037387533,0.5104758,0.018516922,0.0011059874,0.0000037501627,0.0010476573,0.0000109643615,0.0000012363236,0.010322318,0.0030577765,0.4509952],"study_design_scores_gemma":[0.003253394,0.0030968897,0.9373591,0.009750459,0.0048169815,0.000023529423,0.008851194,0.00008820594,0.0000029221915,0.00028101777,0.032277934,0.00019837146],"about_ca_topic_score_codex":0.00030634273,"about_ca_topic_score_gemma":0.002680721,"teacher_disagreement_score":0.45079684,"about_ca_system_score_codex":0.000059259008,"about_ca_system_score_gemma":0.00045808477,"threshold_uncertainty_score":0.24649826},"labels":[],"label_agreement":null},{"id":"W2987507623","doi":"10.1001/jama.2019.15702","title":"Effect of Caspofungin vs Fluconazole Prophylaxis on Invasive Fungal Disease Among Children and Young Adults With Acute Myeloid Leukemia","year":2019,"lang":"en","type":"article","venue":"JAMA","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":108,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hospital for Sick Children","funders":"National Cancer Institute","keywords":"Medicine; Caspofungin; Fluconazole; Internal medicine; Aspergillosis; Neutropenia; Myeloid leukemia; Randomized controlled trial; Chemotherapy; Immunology; Antifungal; Dermatology","score_opus":0.0024484703385698335,"score_gpt":0.21108807863445778,"score_spread":0.20863960829588793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2987507623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972221,0.00024390573,0.0000027686176,0.00006387715,0.00005764242,0.0014615309,0.00010003008,0.000035938432,0.00081216876],"genre_scores_gemma":[0.99861383,0.00006652509,0.000025131001,0.00008076629,0.00008893678,0.000024387806,0.00007122884,0.000027445487,0.0010017381],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99859935,0.00008502109,0.00020753777,0.00045423108,0.0003862515,0.00026763135],"domain_scores_gemma":[0.9989023,0.00015521105,0.00010496248,0.00047699735,0.000107488326,0.0002530307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022678245,0.00023313846,0.00045981954,0.00007787625,0.000048419603,0.000020096813,0.00008735204,0.00011134916,0.00008013904],"category_scores_gemma":[0.00019801097,0.00015382463,0.00009813802,0.00015113998,0.00016824427,0.00015412697,0.000044873486,0.00030073363,0.000045423378],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.02363849,0.000060155315,0.96629024,0.0005950511,0.00014932406,0.00018112856,0.0002584176,0.0000031137035,0.0030695025,0.000022231518,0.00016930228,0.0055630635],"study_design_scores_gemma":[0.005474189,0.005521,0.96315014,0.0007137534,0.00019371597,0.000027198328,0.000050031536,0.000058202186,0.024640203,0.000004376214,0.000005557727,0.00016162744],"about_ca_topic_score_codex":0.00025544545,"about_ca_topic_score_gemma":0.00012001366,"teacher_disagreement_score":0.0215707,"about_ca_system_score_codex":0.00011436487,"about_ca_system_score_gemma":0.00021433295,"threshold_uncertainty_score":0.6272786},"labels":[],"label_agreement":null},{"id":"W2993072965","doi":"10.1371/journal.ppat.1007823","title":"A novel genetic circuitry governing hypoxic metabolic flexibility, commensalism and virulence in the fungal pathogen Candida albicans","year":2019,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; National Institutes of Health; Centre Hospitalier Universitaire Vaudois; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Medizinische Universität Wien; Universität Wien; National Research Council Canada; Carnegie Mellon University","keywords":"Biology; Candida albicans; Cell biology; Mutant; Corpus albicans; Genetic screen; Microbiology; Biochemistry; Gene","score_opus":0.029589101417777937,"score_gpt":0.2609176351216605,"score_spread":0.23132853370388257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2993072965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99390876,0.0022705626,0.00012363098,0.00045756812,0.000082512386,0.00096756575,0.00032175655,0.000044583252,0.0018230393],"genre_scores_gemma":[0.99666595,0.00026980776,0.00059023814,0.0019896806,0.000112605965,0.000046995538,0.000027329066,0.00003507349,0.0002623416],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99750924,0.00019905872,0.00045229658,0.0006734218,0.0006231038,0.0005428933],"domain_scores_gemma":[0.9983968,0.00031053743,0.00011573653,0.00091929483,0.00008412216,0.00017349744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007301417,0.00028735123,0.00057494396,0.00008348225,0.0001193749,0.000044283788,0.0002514208,0.00015114604,0.00022900668],"category_scores_gemma":[0.00029974608,0.00021078959,0.00014080762,0.0003517681,0.00017447575,0.00009430823,0.00010684058,0.00047639187,0.00009767177],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008409409,0.00031051532,0.63297445,0.000150389,0.000042738713,0.00008908378,0.0015891157,0.0000042901042,0.36250097,0.00016605819,0.000022523305,0.0020657908],"study_design_scores_gemma":[0.001266094,0.00017933614,0.99394536,0.00013244229,0.00019316214,0.00013537279,0.0012335429,0.0007396218,0.0008445401,0.00013029891,0.0009439238,0.0002562768],"about_ca_topic_score_codex":0.00029858234,"about_ca_topic_score_gemma":0.00054152944,"teacher_disagreement_score":0.36165643,"about_ca_system_score_codex":0.00008896771,"about_ca_system_score_gemma":0.00018259564,"threshold_uncertainty_score":0.859575},"labels":[],"label_agreement":null},{"id":"W2995718936","doi":"10.1097/mph.0000000000001690","title":"A Retrospective Analysis of Invasive Fungal Diseases (IFD) of the Central Nervous System in Children With Lymphoid Malignancies","year":2019,"lang":"en","type":"article","venue":"Journal of Pediatric Hematology/Oncology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Medicine; Mucormycosis; Neutropenia; Lymphoma; Internal medicine; Rituximab; Febrile neutropenia; Amphotericin B; Acute leukemia; Retrospective cohort study; Cancer; Leukemia; Chemotherapy; Surgery; Dermatology; Antifungal","score_opus":0.006536218614980853,"score_gpt":0.24689866177245418,"score_spread":0.24036244315747332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2995718936","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969688,0.0018599654,0.00003362918,0.00015949177,0.00018126612,0.000436916,0.000048309583,0.000006395116,0.00030523157],"genre_scores_gemma":[0.9993445,0.00026070714,0.0001495004,0.00005406092,0.00013638164,0.0000039021843,0.0000036762106,0.000011910247,0.000035327645],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974369,0.00032278252,0.0011533637,0.0002455017,0.00048545995,0.0003559962],"domain_scores_gemma":[0.9968531,0.00034894535,0.0017093665,0.00036731554,0.00057413825,0.00014711983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005146773,0.00018744521,0.0019181778,0.0005996615,0.000032181368,0.0000035080352,0.00027118187,0.00023633709,0.000051713952],"category_scores_gemma":[0.0005124939,0.00011041639,0.00053063367,0.0015464308,0.00025444958,0.00009093137,0.00006659525,0.00034167914,0.0000022537977],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012017204,0.00053067895,0.99455917,0.00031070842,0.0013761466,0.0001871077,0.0005208289,0.00008516674,0.0005258245,0.00049445865,0.0001525995,0.000055613116],"study_design_scores_gemma":[0.0024457907,0.001480222,0.9876874,0.0001017667,0.004668956,0.001147391,0.0018001822,0.000028822787,0.0005145158,0.000027115757,0.000005703403,0.00009212386],"about_ca_topic_score_codex":0.00009154149,"about_ca_topic_score_gemma":0.0002775212,"teacher_disagreement_score":0.006871737,"about_ca_system_score_codex":0.00065081846,"about_ca_system_score_gemma":0.002144529,"threshold_uncertainty_score":0.450265},"labels":[],"label_agreement":null},{"id":"W2996027202","doi":"10.1016/j.ijid.2019.12.017","title":"Invasive Scedosporium spp. and Lomentospora prolificans infections in pediatric patients: Analysis of 55 cases from FungiScope® and the literature","year":2019,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"MSD Sharp and Dohme; Basilea Pharmaceutica; Astellas Pharma; Amplyx; Cidara Therapeutics; Gilead Sciences","keywords":"Medicine; Biology","score_opus":0.004031465109039978,"score_gpt":0.24828924664845498,"score_spread":0.244257781539415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2996027202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99559176,0.0033409118,0.000015067051,0.00024314974,0.00024077958,0.00022643588,0.00019880352,0.000005133932,0.00013795191],"genre_scores_gemma":[0.9964823,0.0031228992,0.000008445324,0.00014114735,0.00014419774,0.0000038791522,0.00005494244,0.0000063503217,0.000035812594],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99882376,0.00007304569,0.00047252834,0.00015235205,0.0003895298,0.00008880028],"domain_scores_gemma":[0.9980572,0.0005367779,0.00039861538,0.000121025274,0.00079269276,0.00009372669],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016426109,0.00011273651,0.00040510096,0.0005617707,0.000026749758,0.000051498675,0.00007963525,0.00004744675,0.000112587615],"category_scores_gemma":[0.0008358909,0.000072811716,0.00019792691,0.0005205958,0.000115426905,0.00023802026,0.00003817344,0.00018030703,0.0000019768245],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00111762,0.00055368023,0.99615866,0.000046918976,0.0008920008,0.000052709554,0.0005643811,0.00007430786,0.000054148473,0.00010071433,0.00007054122,0.00031433668],"study_design_scores_gemma":[0.0034977293,0.00023970808,0.99411905,0.00016179224,0.0012082898,0.000022103828,0.0002594418,0.000035947287,0.00002588378,0.00034266952,0.000024266334,0.00006309303],"about_ca_topic_score_codex":0.00020808546,"about_ca_topic_score_gemma":0.00033160255,"teacher_disagreement_score":0.0023801092,"about_ca_system_score_codex":0.00008325423,"about_ca_system_score_gemma":0.0001512082,"threshold_uncertainty_score":0.29691756},"labels":[],"label_agreement":null},{"id":"W2996119600","doi":"10.3138/jammi.2019-0020","title":"<i>Candida albicans</i> ventriculoperitoneal shunt infection in an infant: A case report and review of the literature","year":2019,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Manitoba Health; University of Manitoba","funders":"","keywords":"Shunt (medical); Candida albicans; Medicine; Microbiology; Surgery; Biology","score_opus":0.0028642030490199904,"score_gpt":0.23698980366519884,"score_spread":0.23412560061617885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2996119600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878419,0.007354977,6.683509e-7,0.0041384203,0.00038404824,0.000210237,0.00002886289,0.0000011379982,0.00003974179],"genre_scores_gemma":[0.9933383,0.004659869,0.000001198125,0.0018780341,0.000052119027,0.0000012047036,0.0000057200687,0.0000030203125,0.00006052652],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987489,0.00028910808,0.00051746995,0.00009795529,0.00024758096,0.00009900783],"domain_scores_gemma":[0.9986218,0.00012861512,0.0006809196,0.00014868543,0.0002852451,0.00013468773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010979963,0.00007431696,0.00035047956,0.000034841072,0.000046557525,0.0000041866924,0.00006112291,0.0001237395,0.000047200007],"category_scores_gemma":[0.0020832696,0.00004021789,0.000099127115,0.0002054655,0.00007731747,0.00005638814,0.000038305003,0.00039275474,4.1786453e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000087341774,0.00008229253,0.9956906,0.00096212013,0.00005912681,0.00056571665,0.000047891543,0.0000010137279,0.0005988931,0.000013792748,0.001663351,0.00022789069],"study_design_scores_gemma":[0.0010530916,0.00014271292,0.9819028,0.0047232294,0.00017217398,0.008140271,0.00002621226,0.0000056806684,0.00013463192,0.000024912742,0.0036209659,0.00005335981],"about_ca_topic_score_codex":0.015947865,"about_ca_topic_score_gemma":0.128815,"teacher_disagreement_score":0.112867124,"about_ca_system_score_codex":0.00025773855,"about_ca_system_score_gemma":0.0013981228,"threshold_uncertainty_score":0.990605},"labels":[],"label_agreement":null},{"id":"W2996591767","doi":"10.1016/j.jcrc.2019.12.012","title":"Pulmonary mucormycosis in a patient with acute liver failure: A case report and systematic review of the literature","year":2019,"lang":"en","type":"review","venue":"Journal of Critical Care","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Medicine; Mucormycosis; Intensive care medicine; Liver failure; Surgery","score_opus":0.02119086499006264,"score_gpt":0.33579285405857556,"score_spread":0.31460198906851294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2996591767","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006898802,0.99740815,0.000002389418,0.00019236995,0.00007224959,0.001462767,0.00005715093,0.0000019015557,0.000113160095],"genre_scores_gemma":[0.06376233,0.93579763,0.00013216914,0.00018271347,0.00004201996,0.000018027642,0.000008321375,0.000020704842,0.000036104997],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9969743,0.00036420964,0.0016420853,0.00021845201,0.0006344278,0.00016653193],"domain_scores_gemma":[0.9969905,0.00036032862,0.0007818212,0.00055449735,0.0011688679,0.00014395818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053693884,0.00026971562,0.0031443536,0.00011001118,0.00002723206,0.000019952899,0.000116794385,0.00021372586,0.0000140572165],"category_scores_gemma":[0.0019847252,0.00011712753,0.0007042272,0.00037284172,0.00013148454,0.00009766354,0.000059060018,0.0009495596,8.9305627e-7],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030170664,0.000056383782,0.000054163414,0.7271461,0.00007922354,0.27004138,0.00017607538,2.2712923e-9,1.3691933e-7,0.00001261413,0.00003159352,0.0023721452],"study_design_scores_gemma":[0.000072980736,0.0002366819,0.000011547746,0.57216597,0.006948741,0.41902572,0.00035844021,1.5444819e-7,3.013607e-7,0.0000023036998,0.001107551,0.00006964384],"about_ca_topic_score_codex":0.0000039715187,"about_ca_topic_score_gemma":0.000009907772,"teacher_disagreement_score":0.15498015,"about_ca_system_score_codex":0.0001637212,"about_ca_system_score_gemma":0.0006324243,"threshold_uncertainty_score":0.4776322},"labels":[],"label_agreement":null},{"id":"W2996856721","doi":"10.1101/2020.01.06.896548","title":"Tracing the evolutionary history and global expansion of <i>Candida auris</i> using population genomic analyses","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"Centers for Disease Control and Prevention; U.S. Department of Health and Human Services; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Broad Institute; Canadian Institute for Advanced Research","keywords":"Clade; Candida auris; Biology; Phylogeography; Population; Phylogenetic tree; Context (archaeology); Zoology; Evolutionary biology; Genetics; Demography; Gene; Microbiology; Antifungal","score_opus":0.04384933973751019,"score_gpt":0.28269024656250086,"score_spread":0.23884090682499065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2996856721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98684853,0.010561038,0.0012768253,0.00016437196,0.0003746251,0.00054375385,0.00012902048,0.000092287955,0.000009554897],"genre_scores_gemma":[0.9958793,0.00027618516,0.0033106364,0.00019514456,0.00028282174,0.000012603484,0.0000011707617,0.00004045607,0.0000016717017],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99791265,0.000111641995,0.0005900693,0.00070110895,0.00041703935,0.00026747026],"domain_scores_gemma":[0.998269,0.000050758863,0.0004551812,0.0007582856,0.00027826085,0.00018851736],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00034528252,0.00034199312,0.00066863635,0.00009228509,0.00013602874,0.000023201359,0.00016959096,0.00031053554,0.00002399879],"category_scores_gemma":[0.00021801249,0.00029101607,0.00020251937,0.00026354796,0.00021505794,0.00010075313,0.00023274815,0.0004684274,0.000002800324],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020728914,0.000052257637,0.29646903,0.00082792033,0.00013905937,0.00002721255,0.000019153289,0.00011252595,0.70185643,0.000095080795,0.00019072412,0.0000033058873],"study_design_scores_gemma":[0.00036721598,0.000049868635,0.9843296,0.00057713693,0.0005496965,8.6326544e-8,0.000014294417,0.002683721,0.010966031,0.0000070427654,0.00018616382,0.00026919044],"about_ca_topic_score_codex":0.0007607342,"about_ca_topic_score_gemma":0.000010678557,"teacher_disagreement_score":0.6908904,"about_ca_system_score_codex":0.0012921428,"about_ca_system_score_gemma":0.0009779355,"threshold_uncertainty_score":0.9999542},"labels":[],"label_agreement":null},{"id":"W2997470473","doi":"10.1093/jac/dkz534","title":"Prevalence and mechanisms of azole resistance in clinical isolates of Aspergillus section Fumigati species in a Canadian tertiary care centre, 2000 to 2013","year":2019,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Institut National de la Recherche Scientifique; Institut National de Santé Publique du Québec; Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"National Institute of General Medical Sciences; Fonds de Recherche du Québec - Santé; National Institutes of Health","keywords":"Azole; Aspergillus fumigatus; Efflux; Aspergillus; Biology; Microbiology; Drug resistance; Aspergillosis; Genetics; Antifungal; Immunology","score_opus":0.007518769431899114,"score_gpt":0.25811660908507306,"score_spread":0.25059783965317395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997470473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99694914,0.00065133575,0.00003774325,0.001649754,0.00016090799,0.00031365582,0.000019325293,0.0000019821546,0.00021618255],"genre_scores_gemma":[0.99630386,0.0013285354,0.0013224914,0.00049198524,0.00006130212,2.3456586e-7,0.0000012941283,0.000012965766,0.00047735282],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985683,0.00006417936,0.00081909675,0.00017817103,0.00014973528,0.00022051788],"domain_scores_gemma":[0.9991224,0.000051388914,0.00027714198,0.00017020786,0.00022896375,0.00014993935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048704442,0.00011829884,0.00051852106,0.00024580414,0.00001377635,0.0000071456047,0.0001016217,0.00013090335,0.00014708874],"category_scores_gemma":[0.000058222668,0.00010235676,0.00011775245,0.00020793869,0.00007147116,0.00010779038,0.00001118601,0.00025841928,0.0000016720559],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013225774,0.000113348564,0.7702744,0.00044428091,0.000024657556,0.0000140618195,0.0015314559,0.000009923877,0.22520009,0.000019420213,0.00076401565,0.0002817629],"study_design_scores_gemma":[0.0021074992,0.00030040782,0.9207467,0.0014158475,0.000015976755,0.000011835177,0.00044970564,0.000010891605,0.074100144,0.000049971975,0.0006950913,0.000095967414],"about_ca_topic_score_codex":0.005216553,"about_ca_topic_score_gemma":0.09262061,"teacher_disagreement_score":0.15109994,"about_ca_system_score_codex":0.0001960226,"about_ca_system_score_gemma":0.00046952578,"threshold_uncertainty_score":0.9239367},"labels":[],"label_agreement":null},{"id":"W2998446256","doi":"10.1093/infdis/jiz688","title":"Chronic Disseminated Candidiasis During Hematological Malignancies: An Immune Reconstitution Inflammatory Syndrome With Expansion of Pathogen-Specific T Helper Type 1 Cells","year":2019,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Health, British Columbia","keywords":"Immunology; Neutrophilia; Immune system; Neutropenia; CD8; Biology; Medicine; Chemotherapy; Internal medicine","score_opus":0.007285666774194722,"score_gpt":0.22743773410399667,"score_spread":0.22015206732980194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998446256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939713,0.005431412,0.00004330165,0.000018965917,0.000162468,0.0002741639,0.000009322639,0.000023469827,0.00006558851],"genre_scores_gemma":[0.9982047,0.001652117,0.0000116127,0.000009513713,0.00005504349,0.0000018540825,0.0000052914775,0.000013306103,0.00004656538],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99878806,0.00013236712,0.00046516338,0.00012761196,0.0003020764,0.00018471171],"domain_scores_gemma":[0.99869776,0.00009887802,0.00038038302,0.0003332563,0.00035528807,0.00013444998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029787957,0.00014835165,0.00045457933,0.00009874333,0.00010160341,0.000012750151,0.000101833895,0.00007062737,0.00028586676],"category_scores_gemma":[0.000055440607,0.000081854414,0.00013159536,0.00021346552,0.00021644602,0.0002346604,0.000021365951,0.00019947339,0.000016641125],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019749615,0.00024095118,0.43636775,0.00040672274,0.00010091385,0.00028189452,0.00022278824,0.00013718703,0.55995584,0.00003282244,0.000015111453,0.00026305034],"study_design_scores_gemma":[0.0014923097,0.0024249225,0.934866,0.0012706701,0.00024190638,0.0022959341,0.0009574101,0.000009493042,0.05625539,0.000030182846,0.000020850328,0.00013493546],"about_ca_topic_score_codex":0.000010366685,"about_ca_topic_score_gemma":0.000010059416,"teacher_disagreement_score":0.50370044,"about_ca_system_score_codex":0.0001894527,"about_ca_system_score_gemma":0.00036742736,"threshold_uncertainty_score":0.3337926},"labels":[],"label_agreement":null},{"id":"W2998829041","doi":"10.1016/j.micinf.2019.12.004","title":"Galactosaminogalactan secreted from Aspergillus fumigatus and Aspergillus flavus induces platelet activation","year":2020,"lang":"en","type":"article","venue":"Microbes and Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Austrian Science Fund","keywords":"Aspergillus fumigatus; Platelet; Microbiology; Biology; Immune system; Secretion; Platelet activation; Aspergillus flavus; Flow cytometry; Innate immune system; Immunology; Biochemistry","score_opus":0.018930642929391606,"score_gpt":0.23665441336911675,"score_spread":0.21772377043972513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998829041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966568,0.00044619007,0.0003905953,0.0011267333,0.000080081714,0.00023852587,0.000015058789,0.0000930154,0.0009530486],"genre_scores_gemma":[0.99754286,0.0007282107,0.00009467038,0.0011723444,0.00023841148,0.000004172568,0.00012383507,0.000017642336,0.000077884026],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99905294,0.000039655755,0.00021613328,0.00038864577,0.000120944744,0.00018168875],"domain_scores_gemma":[0.99950445,0.000046904082,0.00007481094,0.00012062582,0.0000691938,0.00018400508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000701214,0.0001800743,0.00028101003,0.000051137442,0.0001520258,0.000056012723,0.000022129148,0.00017995274,0.00015165574],"category_scores_gemma":[0.00010863487,0.00015606752,0.000054642165,0.00015439102,0.00008818663,0.0002479248,0.00003560223,0.00025706502,0.000014172636],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040620245,0.00004304808,0.16074082,0.00009537249,0.0000643052,0.00000788472,0.00070568564,0.0000017851867,0.8254935,0.00003006894,0.00029728882,0.01211405],"study_design_scores_gemma":[0.00116192,0.0004173479,0.8212624,0.00008294007,0.00006171424,0.000015287296,0.00021906433,0.000341629,0.16970468,0.000044954875,0.0065125874,0.00017547046],"about_ca_topic_score_codex":0.0010250928,"about_ca_topic_score_gemma":0.00009660681,"teacher_disagreement_score":0.66052157,"about_ca_system_score_codex":0.00005229429,"about_ca_system_score_gemma":0.000035045814,"threshold_uncertainty_score":0.6364249},"labels":[],"label_agreement":null},{"id":"W2998961622","doi":"10.1503/cmaj.74194","title":"The authors respond to “<i>Candida auris</i> can be identified accurately”","year":2020,"lang":"en","type":"letter","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Candida auris; Candida infections; Limit (mathematics); Psychology; Primer (cosmetics); Medicine; Dermatology; Antifungal; Mathematics; Chemistry","score_opus":0.025880634753165516,"score_gpt":0.29316251026963797,"score_spread":0.2672818755164724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998961622","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0061871884,0.00022757066,0.000024810579,0.9877668,0.0027751278,0.00041645282,0.00025992372,0.000034010187,0.0023081184],"genre_scores_gemma":[0.013153887,0.00024343193,0.000026726695,0.93389666,0.015581647,0.000017297123,0.00015404412,0.00006136019,0.03686493],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99272275,0.0006494704,0.0009993245,0.00047952292,0.0039431993,0.0012057547],"domain_scores_gemma":[0.9932141,0.0008890264,0.00047364287,0.00040564474,0.0011000935,0.0039175246],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.002909995,0.00035407432,0.0006962936,0.0002498657,0.0010707191,0.00047788574,0.00067311263,0.0016482199,0.0026282817],"category_scores_gemma":[0.019596143,0.0002583379,0.0003488691,0.00071232463,0.00012106231,0.00007552119,0.000048300957,0.008432742,0.00037053326],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007685272,0.00000575597,0.0047562374,0.000030686442,0.00023117872,0.00786225,0.000307438,1.04815015e-7,0.000012165225,0.000010183619,0.98252773,0.0041794037],"study_design_scores_gemma":[0.00064332737,0.00010777973,0.009662896,0.0001963898,0.0001352477,0.0002333017,0.00037570423,0.000008303984,0.000012984111,0.00012536986,0.98824596,0.00025273563],"about_ca_topic_score_codex":0.0036353723,"about_ca_topic_score_gemma":0.116242796,"teacher_disagreement_score":0.11260742,"about_ca_system_score_codex":0.003448985,"about_ca_system_score_gemma":0.01689407,"threshold_uncertainty_score":0.9999869},"labels":[],"label_agreement":null},{"id":"W2999244147","doi":"10.1016/j.chembiol.2019.12.008","title":"Overcoming Fungal Echinocandin Resistance through Inhibition of the Non-essential Stress Kinase Yck2","year":2020,"lang":"en","type":"article","venue":"Cell chemical biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Structural Genomics Consortium; Ontario Genomics; University of Toronto","funders":"Argonne National Laboratory; Eshelman Institute for Innovation, University of North Carolina at Chapel Hill; Janssen Pharmaceuticals; Biological and Environmental Research; National Institute of Allergy and Infectious Diseases; Takeda Canada; Canadian Institutes of Health Research; Innovative Medicines Initiative; Novartis Pharma; Canada Foundation for Innovation; Meso Scale Diagnostics; Ministerio de Educación, Cultura y Deporte; Merck; Ontario Ministry of Economic Development and Innovation; Wellcome Trust; Fundação de Amparo à Pesquisa do Estado de São Paulo; Genome Canada; Canadian Institute for Advanced Research; U.S. Department of Energy; Pfizer; National Institutes of Health; Canada Research Chairs; U.S. Department of Health and Human Services; Boehringer Ingelheim","keywords":"Caspofungin; Echinocandins; Echinocandin; Candida albicans; Corpus albicans; Kinase; Drug resistance; Fungal pathogen; Microbiology; Biology; Antifungal drug; Antifungal; Pharmacology; Pathogen; Biochemistry; Amphotericin B; Fluconazole","score_opus":0.015985093660141374,"score_gpt":0.2632149904132043,"score_spread":0.24722989675306292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999244147","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99115497,0.0003094997,0.0003559153,0.0013761864,0.000090923655,0.00020867048,0.000059020163,0.000021513768,0.0064232857],"genre_scores_gemma":[0.99839497,0.000024323812,0.0003006675,0.0007931846,0.00022273048,0.0000039867223,0.000041259853,0.000010375064,0.00020849593],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989659,0.000049665272,0.0002963002,0.0003382098,0.00012396504,0.00022591102],"domain_scores_gemma":[0.9993713,0.00008997622,0.000115467876,0.0002720965,0.00006191688,0.000089223824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007121956,0.00013385422,0.00032012517,0.000009714151,0.000051732135,0.000004128649,0.00012294012,0.00019079408,0.00015748857],"category_scores_gemma":[0.0001937826,0.00009253626,0.0001639397,0.00016671082,0.00035562934,0.000036039233,0.00010539954,0.00031040047,0.00001532312],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060151477,0.00009650808,0.048136085,0.00028259563,0.000012178847,0.000009774883,0.00022295462,3.321136e-7,0.94864434,0.00032487762,0.0016272533,0.000041610983],"study_design_scores_gemma":[0.000866843,0.00007206447,0.004517085,0.00008720772,0.000044934633,0.0000012180462,0.000112515714,0.000026661535,0.9929577,0.0004638419,0.00075642316,0.000093493785],"about_ca_topic_score_codex":0.000018008086,"about_ca_topic_score_gemma":0.0000122037445,"teacher_disagreement_score":0.044313397,"about_ca_system_score_codex":0.000043661556,"about_ca_system_score_gemma":0.000075032396,"threshold_uncertainty_score":0.37735194},"labels":[],"label_agreement":null},{"id":"W2999544729","doi":"10.1016/j.prosdent.2019.09.024","title":"The effects of three disinfection protocols on Candida spp., denture stomatitis, and biofilm: A parallel group randomized controlled trial","year":2020,"lang":"en","type":"article","venue":"Journal of Prosthetic Dentistry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Dentures; Candida albicans; Dentistry; Candida tropicalis; Biofilm; Medicine; Randomized controlled trial; Stomatitis; Chlorhexidine; Sodium hypochlorite; Antifungal; Microbiology; Internal medicine; Biology; Dermatology; Chemistry; Bacteria","score_opus":0.011632110383673967,"score_gpt":0.28529652806214134,"score_spread":0.2736644176784674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999544729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97005254,0.0013448057,0.0014813651,0.0009620142,0.000433672,0.025601944,0.0000026933417,0.000010595456,0.000110363646],"genre_scores_gemma":[0.9980178,0.0003269932,0.00014979897,0.00011103913,0.0002442775,0.0009978457,0.0000012342613,0.000013193992,0.00013781103],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99791443,0.0003096799,0.0008901121,0.0001518996,0.00057002646,0.00016382376],"domain_scores_gemma":[0.99782026,0.00078611186,0.00088900916,0.00016881507,0.00016952743,0.00016629511],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011681218,0.00016611126,0.0012760592,0.00004174802,0.00010891172,0.00006458611,0.00010149432,0.0001075696,0.000022604541],"category_scores_gemma":[0.0025831389,0.000085004016,0.00051030796,0.00009802297,0.00025064626,0.00006909414,0.000022155882,0.00035738005,0.0000030322228],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.98450077,0.00032134043,0.0061433045,0.0006441138,0.0003594322,0.00018819603,0.00010980815,6.309739e-7,0.0049729417,0.00030055616,0.0005536717,0.0019052497],"study_design_scores_gemma":[0.97484714,0.004681288,0.016532488,0.0009637573,0.00061192905,0.00024513996,0.00005643968,0.00010552763,0.0009017012,0.0007635826,0.00019795212,0.00009303558],"about_ca_topic_score_codex":0.000008047605,"about_ca_topic_score_gemma":0.000027668826,"teacher_disagreement_score":0.02796526,"about_ca_system_score_codex":0.000039057846,"about_ca_system_score_gemma":0.0001268988,"threshold_uncertainty_score":0.34663633},"labels":[],"label_agreement":null},{"id":"W3000203935","doi":"10.1093/cid/ciaa007","title":"High Rates of Influenza-Associated Invasive Pulmonary Aspergillosis May Not Be Universal: A Retrospective Cohort Study from Alberta, Canada","year":2020,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Health Services; University of Alberta","funders":"","keywords":"Medicine; Aspergillosis; Retrospective cohort study; Intensive care medicine; Respiratory disease; Cohort; Pulmonary aspergillosis; Cohort study; Internal medicine; Immunology; Lung","score_opus":0.039203327248614785,"score_gpt":0.3269602339117523,"score_spread":0.28775690666313747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000203935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956038,0.0001171031,0.000001563435,0.001615225,0.00023978589,0.0010173902,0.0007410079,0.00008964074,0.0005744866],"genre_scores_gemma":[0.9939289,0.00013093108,0.0000028448064,0.0053559863,0.00018349383,0.000025597063,0.0001875923,0.000036310026,0.00014831306],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969826,0.0003971594,0.00093219546,0.00077743613,0.00061714853,0.00029348035],"domain_scores_gemma":[0.99548084,0.0024743844,0.00040181226,0.00047440222,0.00054181734,0.00062675035],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00021686759,0.00029066525,0.0012916249,0.00003939781,0.00012213478,0.000016776745,0.0001632867,0.00016974375,0.00059208693],"category_scores_gemma":[0.011732374,0.00026064718,0.00036384803,0.00044372884,0.0003135707,0.00011607206,0.00012647005,0.00042561823,0.000014829744],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000932634,0.0024168144,0.99139285,0.000044165252,0.001396919,0.00024381757,0.00011099238,0.000011069792,0.00008224753,0.00003842362,0.0032544,0.00007568661],"study_design_scores_gemma":[0.0023464202,0.0014392438,0.99340135,0.00007338555,0.0013570063,3.3262634e-7,0.0006933863,0.000038910744,0.0001810221,0.00006646973,0.00016275849,0.00023969452],"about_ca_topic_score_codex":0.6220624,"about_ca_topic_score_gemma":0.6272152,"teacher_disagreement_score":0.0115155075,"about_ca_system_score_codex":0.0004917209,"about_ca_system_score_gemma":0.0014759115,"threshold_uncertainty_score":0.99998456},"labels":[],"label_agreement":null},{"id":"W3000254694","doi":"10.1017/ice.2019.369","title":"Preparedness for <i>Candida auris</i> in Canadian Nosocomial Infection Surveillance Program (CNISP) hospitals, 2018","year":2020,"lang":"en","type":"article","venue":"Infection Control and Hospital Epidemiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Public Health Agency of Canada; Sinai Health System; Université Laval","funders":"","keywords":"Candida auris; Preparedness; Medicine; Infection control; Microbiology; Intensive care medicine; Antifungal; Biology; Dermatology","score_opus":0.021378199257981765,"score_gpt":0.3173330090812442,"score_spread":0.2959548098232624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000254694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98126906,0.00056964863,0.0019440413,0.012392248,0.00065551756,0.002409708,0.00007899241,0.00014208806,0.0005386847],"genre_scores_gemma":[0.9949867,0.0003611521,0.00015712698,0.0033647732,0.0005559471,0.00044543867,0.00007218379,0.000020753845,0.000035895606],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99787784,0.00022745074,0.00059651386,0.00058578554,0.00007272877,0.00063966867],"domain_scores_gemma":[0.99844843,0.0005120815,0.00017216707,0.00017313173,0.00015889555,0.0005352959],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00096981257,0.00023410599,0.0008461404,0.00009913884,0.00015364682,0.000017322063,0.000043564865,0.00032459362,0.000024099849],"category_scores_gemma":[0.0035331734,0.00021078117,0.00019049544,0.00019930954,0.00020069901,0.0001356392,0.000016599866,0.00029244268,0.0000127911435],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059981184,0.0001156163,0.9831163,0.00013891551,0.000059117432,0.000006967376,0.0001764058,0.000032665987,0.000089405745,0.00032222847,0.0038122241,0.0115303295],"study_design_scores_gemma":[0.0028749206,0.0028370644,0.9466462,0.000029069468,0.000040115618,0.000007776794,0.000021568128,0.0037656492,0.0000106888865,0.00039816624,0.043147948,0.00022081936],"about_ca_topic_score_codex":0.17853607,"about_ca_topic_score_gemma":0.29442492,"teacher_disagreement_score":0.11588884,"about_ca_system_score_codex":0.0002410726,"about_ca_system_score_gemma":0.00031858808,"threshold_uncertainty_score":0.8595407},"labels":[],"label_agreement":null},{"id":"W3000348398","doi":"10.1101/2020.01.20.912592","title":"Glutamate dehydrogenase (Gdh2)-dependent alkalization is dispensable for escape from macrophages and virulence of <i>Candida albicans</i>","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Stockholms Universitet; Hospital for Sick Children; Julius-Maximilians-Universität Würzburg; Vetenskapsrådet","keywords":"Biochemistry; Candida albicans; Glutamate dehydrogenase; Biology; Amino acid; Corpus albicans; Virulence; Deamination; Cell biology; Chemistry; Microbiology; Glutamate receptor; Enzyme; Gene","score_opus":0.015891231065588752,"score_gpt":0.24319196858403946,"score_spread":0.2273007375184507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000348398","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9823589,0.0052364427,0.005790436,0.0006160643,0.00023544155,0.0013551238,0.0042679408,0.00013338709,0.0000062966205],"genre_scores_gemma":[0.9936902,0.00198487,0.003160673,0.00073245855,0.00017746032,0.00012224549,0.0000076575625,0.00010833953,0.000016104785],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99711686,0.000057204124,0.000692833,0.0012209914,0.00048663458,0.0004254961],"domain_scores_gemma":[0.9976105,0.0001075363,0.0004812958,0.0009689085,0.00043522345,0.00039651437],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030862246,0.00050193985,0.0009666388,0.000084173436,0.00011951224,0.000088806904,0.00027559625,0.00041798103,0.00015383158],"category_scores_gemma":[0.00028341834,0.0005062796,0.00019528596,0.00024462704,0.00021065859,0.00012226088,0.00027557078,0.000382135,0.000014076917],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004596536,0.00015949876,0.039761446,0.001595882,0.00024601482,0.00003162983,0.000035660705,0.0000039091283,0.9565723,0.000068944144,0.0010597782,0.000005302636],"study_design_scores_gemma":[0.0013957534,0.00015354215,0.040783413,0.0007234582,0.00053610833,1.6883973e-8,0.000013887966,0.000975635,0.95308274,0.000019525207,0.001807855,0.00050803827],"about_ca_topic_score_codex":0.0003048936,"about_ca_topic_score_gemma":0.000013698091,"teacher_disagreement_score":0.0113313235,"about_ca_system_score_codex":0.00014605031,"about_ca_system_score_gemma":0.00041841075,"threshold_uncertainty_score":0.9997389},"labels":[],"label_agreement":null},{"id":"W3000969918","doi":"10.1093/femsyr/foaa005","title":"Transcriptional control of hyphal morphogenesis in<i>Candida albicans</i>","year":2020,"lang":"en","type":"review","venue":"FEMS Yeast Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Candida albicans; Morphogenesis; Multicellular organism; Hypha; Virulence; Corpus albicans; Cell biology; Organism; Transcription factor; Microbiology; Fungal protein; Yeast; Phenotype; Model organism; Budding yeast; Genetics; Saccharomyces cerevisiae; Gene","score_opus":0.13265435036001416,"score_gpt":0.4164326489317116,"score_spread":0.28377829857169745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000969918","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023592493,0.99404764,0.00009159823,0.0002533165,0.00008091593,0.0015838173,0.000539442,0.000019233554,0.0031481],"genre_scores_gemma":[0.035696942,0.9618157,0.000045741774,0.000039803406,0.00032698034,0.00017714416,0.00015044231,0.00005923997,0.0016879798],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9957046,0.00059238623,0.00088017486,0.0006791654,0.0015067796,0.00063690497],"domain_scores_gemma":[0.99824274,0.00038262663,0.00011991915,0.00054875494,0.0003501995,0.0003557651],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014672293,0.00032344885,0.002357144,0.00045798012,0.00006263384,0.000019289755,0.00036720408,0.000374909,0.001035401],"category_scores_gemma":[0.00045050879,0.00025636426,0.0007309162,0.0012036018,0.000443632,0.000049513288,0.000056106426,0.0013540558,0.00022345856],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00094457157,0.000536575,0.00245399,0.034297433,0.00038914054,0.00058008486,0.00012564384,3.262789e-7,0.000937514,0.0007636904,0.0014339804,0.95753706],"study_design_scores_gemma":[0.0011695343,0.0002854996,0.0021129928,0.006740592,0.00024909843,0.000045049514,0.00007165838,0.000015610893,0.000009777618,0.000031120388,0.98908585,0.0001832153],"about_ca_topic_score_codex":0.0002668659,"about_ca_topic_score_gemma":0.00012793629,"teacher_disagreement_score":0.9876519,"about_ca_system_score_codex":0.0003428649,"about_ca_system_score_gemma":0.0024272057,"threshold_uncertainty_score":0.99998885},"labels":[],"label_agreement":null},{"id":"W3001165932","doi":"10.1101/2020.01.21.901744","title":"The zinc cluster transcription factor Rha1 is a positive filamentation regulator in <i>Candida albicans</i>","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Canadian Institutes of Health Research; Concordia University","keywords":"Candida albicans; Biology; Filamentation; Cell biology; Gene; Corpus albicans; Transcription factor; Microbiology; Genetics","score_opus":0.01668199406727845,"score_gpt":0.24798128306734804,"score_spread":0.2312992890000696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3001165932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9886028,0.000978317,0.00089103356,0.0062169386,0.00058577553,0.0019479962,0.00057319633,0.00016699727,0.000036931007],"genre_scores_gemma":[0.9961555,0.00038641004,0.00059239264,0.002216813,0.00033002096,0.00017476424,0.0000025460683,0.00009524699,0.000046290097],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99671316,0.00022589485,0.00076488353,0.0010949619,0.0006540888,0.00054700323],"domain_scores_gemma":[0.99782574,0.00013143169,0.00032792398,0.0010177335,0.00038193038,0.00031521957],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00046203943,0.0005318541,0.000714707,0.00013406073,0.0002082002,0.00018230581,0.00030904135,0.0005038547,0.00011603399],"category_scores_gemma":[0.00020779387,0.00044462894,0.0003033401,0.000466185,0.00021519774,0.00016803535,0.00013561914,0.0010788596,0.00005415678],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001414274,0.00022469094,0.07038738,0.0006963482,0.00027118842,0.00009158135,0.00029449526,0.000004125492,0.9245679,0.00027687266,0.0017519697,0.000019220319],"study_design_scores_gemma":[0.0015538305,0.0001604126,0.8467779,0.0007660865,0.00020581436,2.8862763e-8,0.000050845854,0.0003061864,0.14606637,0.000008755874,0.00359149,0.0005122522],"about_ca_topic_score_codex":0.0001436459,"about_ca_topic_score_gemma":0.00006932294,"teacher_disagreement_score":0.7785015,"about_ca_system_score_codex":0.0007296389,"about_ca_system_score_gemma":0.0007742374,"threshold_uncertainty_score":0.99980056},"labels":[],"label_agreement":null},{"id":"W3001479705","doi":"10.1101/2020.01.21.914549","title":"Candida albicans exhibits distinct cytoprotective responses to anti-fungal drugs that facilitate the evolution of drug resistance","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Candida albicans; Biology; Epigenetics; Corpus albicans; Drug resistance; Population; Caspofungin; Efflux; Fluconazole; Drug; Antifungal drug; Auxotrophy; Genetics; Computational biology; Microbiology; Pharmacology; Antifungal; Gene; Mutant; Medicine","score_opus":0.022639623499948226,"score_gpt":0.24488838980147185,"score_spread":0.22224876630152363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3001479705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9866539,0.0018412961,0.0028877137,0.003866946,0.00042921002,0.002620762,0.0013434209,0.00025966234,0.00009709203],"genre_scores_gemma":[0.99759954,0.000089357585,0.0011205751,0.0002594508,0.00025453963,0.00027438177,7.80153e-7,0.00010414426,0.0002972581],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9952404,0.00055966334,0.00084162375,0.0015560145,0.0010945878,0.00070769136],"domain_scores_gemma":[0.9953558,0.00038740656,0.00056780747,0.0021122203,0.0010731771,0.0005035908],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014865217,0.0007148128,0.0012452794,0.00024098571,0.00032764758,0.000087530854,0.00066726556,0.00036845377,0.00005329849],"category_scores_gemma":[0.0024087685,0.00058231864,0.00040376358,0.00095935585,0.0005184325,0.00012348127,0.00054847973,0.001320073,0.000056247034],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005633578,0.00032186872,0.25548527,0.0030405833,0.00054905907,0.00022390812,0.00089281594,0.000016426578,0.7303618,0.0009521623,0.0025175773,0.000004944305],"study_design_scores_gemma":[0.0006950068,0.000110176334,0.87310266,0.0014113421,0.0002842921,3.2552776e-8,0.0001993738,0.000034190773,0.12066711,0.00001719023,0.0028812892,0.000597348],"about_ca_topic_score_codex":0.0010497159,"about_ca_topic_score_gemma":0.0002669814,"teacher_disagreement_score":0.61761737,"about_ca_system_score_codex":0.0013009321,"about_ca_system_score_gemma":0.0022634515,"threshold_uncertainty_score":0.9996628},"labels":[],"label_agreement":null},{"id":"W3001775527","doi":"10.1111/tid.13250","title":"Incidence and outcomes of invasive fungal infection among solid organ transplant recipients: A population‐based cohort study","year":2020,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; University of Toronto; University Health Network; Western University","funders":"","keywords":"Medicine; Incidence (geometry); Cohort; Solid organ; Population; Cohort study; Organ transplantation; Internal medicine; Transplantation; Environmental health","score_opus":0.013822264826334744,"score_gpt":0.2711227090197365,"score_spread":0.25730044419340176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3001775527","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966945,0.000044211374,0.0008959408,0.0001898074,0.000088726396,0.00164776,0.00020275939,0.00016096434,0.000075307726],"genre_scores_gemma":[0.99912673,0.00011702341,0.000010823892,0.00043122648,0.000041546806,0.00006231561,0.00016711457,0.000027642782,0.000015582982],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99806786,0.00014393976,0.0005381028,0.00051437435,0.00048433527,0.00025141356],"domain_scores_gemma":[0.998717,0.00016499468,0.00014539734,0.00028685833,0.0001406656,0.0005450912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002204094,0.00027835017,0.0006270356,0.00012905618,0.000145579,0.000020776435,0.00006482624,0.000085971624,0.00011131782],"category_scores_gemma":[0.00023425177,0.00023998447,0.00017655616,0.0003327069,0.00011193058,0.0002035818,0.000010939734,0.00023645331,0.000008319247],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00150614,0.0009694266,0.994685,0.0005393918,0.00022621472,0.00021580225,0.0010843847,0.00010052648,0.00055633194,0.000011796272,0.000008599111,0.000096389],"study_design_scores_gemma":[0.00250367,0.00077339355,0.9942702,0.00026292785,0.0011881243,0.000008130721,0.000044969795,0.0003178093,0.00038098547,0.00002359303,0.0000012176135,0.00022495698],"about_ca_topic_score_codex":0.0014048812,"about_ca_topic_score_gemma":0.0024089196,"teacher_disagreement_score":0.002432201,"about_ca_system_score_codex":0.00007554321,"about_ca_system_score_gemma":0.00018684885,"threshold_uncertainty_score":0.9786283},"labels":[],"label_agreement":null},{"id":"W3002277460","doi":"10.1503/cmaj.191136","title":"<i>Talaromyces marneffei</i> fungemia after travel to China in a Canadian patient with AIDS","year":2020,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Odynophagia; China; Fungemia; Medicine; Diarrhea; Pediatrics; Family medicine; Surgery; Dysphagia; Geography; Internal medicine; Mycosis","score_opus":0.00416974461428219,"score_gpt":0.20759465965620028,"score_spread":0.2034249150419181,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3002277460","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9134691,0.00015262718,0.000043093594,0.08166885,0.00013741772,0.00026603654,0.00005238303,0.000008429747,0.004202086],"genre_scores_gemma":[0.9443628,0.000023288154,0.00016082142,0.054747544,0.00044294132,0.0000131229945,0.000009470383,0.000018319808,0.0002216988],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973364,0.00010912066,0.00040487642,0.00025407434,0.0011059698,0.00078957004],"domain_scores_gemma":[0.9921703,0.000044294502,0.00007930187,0.000105922554,0.00019326987,0.007406942],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000712314,0.0001588984,0.00034434165,0.00022377081,0.00011660876,0.000057133573,0.00012728812,0.0002836174,0.0026647374],"category_scores_gemma":[0.0014593782,0.00012871354,0.00008504844,0.00052689255,0.00003208806,0.00009521366,0.000009333031,0.0010605976,0.00013480574],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020134264,0.000025904905,0.9539858,0.000025596028,0.00005776508,0.0050509204,0.00215338,0.000005296305,0.000031251006,0.00001602937,0.025524752,0.0129219685],"study_design_scores_gemma":[0.0009745655,0.0005238439,0.89329517,0.00019563358,0.000028820396,0.00017257013,0.00077827123,0.00007991344,0.000022695882,0.000010615248,0.103749774,0.00016811113],"about_ca_topic_score_codex":0.21145074,"about_ca_topic_score_gemma":0.9375703,"teacher_disagreement_score":0.7261195,"about_ca_system_score_codex":0.0021798057,"about_ca_system_score_gemma":0.009335882,"threshold_uncertainty_score":0.99824697},"labels":[],"label_agreement":null},{"id":"W3004078013","doi":"10.1101/2020.01.28.917278","title":"Functional characterization of clinical isolates of the opportunistic fungal pathogen <i>Aspergillus nidulans</i>","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Universidade Federal de Minas Gerais; Conselho Nacional de Desenvolvimento Científico e Tecnológico; European Regional Development Fund; Fundação de Amparo à Pesquisa do Estado de São Paulo; Howard Hughes Medical Institute","keywords":"Aspergillus nidulans; Virulence; Biology; Microbiology; Context (archaeology); Aspergillus; Gene; Aspergillus fumigatus; Chronic granulomatous disease; Genetics","score_opus":0.047212241050935994,"score_gpt":0.2704619936661398,"score_spread":0.22324975261520383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004078013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937235,0.00018790815,0.0019217897,0.00060412235,0.0012988913,0.00076917396,0.0013856471,0.00008633852,0.000022622422],"genre_scores_gemma":[0.9982308,0.0002746623,0.00040092913,0.0003925322,0.00058007817,0.000026076139,0.000007024923,0.00006634759,0.000021516185],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99672216,0.00023697823,0.0014346068,0.0007653512,0.0005639656,0.00027695214],"domain_scores_gemma":[0.996376,0.00011548307,0.001096443,0.0012501886,0.0008919882,0.00026990962],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00084721803,0.0003720846,0.0011232856,0.00007693434,0.00008224823,0.000020724647,0.0003417827,0.00055448775,0.0001400192],"category_scores_gemma":[0.0010758142,0.00029574812,0.00054293004,0.00037555164,0.0003656003,0.00006435468,0.00036861,0.0008721798,0.000015429854],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031531253,0.00021828561,0.29584104,0.00082763174,0.00017129972,0.000017084938,0.000004928571,0.0000015856817,0.7022116,0.00027883865,0.00010872918,0.0000036505933],"study_design_scores_gemma":[0.00058874104,0.00013019858,0.91123354,0.0005647986,0.00038895343,3.1172313e-8,0.0000028165418,0.0003714007,0.085508406,0.0000025662757,0.00097289693,0.0002356467],"about_ca_topic_score_codex":0.000012886999,"about_ca_topic_score_gemma":0.0000013516485,"teacher_disagreement_score":0.6167032,"about_ca_system_score_codex":0.00007653883,"about_ca_system_score_gemma":0.0016912377,"threshold_uncertainty_score":0.99994946},"labels":[],"label_agreement":null},{"id":"W3004193413","doi":"10.1128/aac.00099-20","title":"Activity of a Long-Acting Echinocandin, Rezafungin, and Comparator Antifungal Agents Tested against Contemporary Invasive Fungal Isolates (SENTRY Program, 2016 to 2018)","year":2020,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"bioMérieux; Dr. Falk Pharma; Idorsia Pharmaceuticals; Wockhardt; TenNor Therapeutics; Astellas Foundation for Research on Metabolic Disorders; Shionogi; Basilea Pharmaceutica; Astellas Pharma; Pfizer; Melinta Therapeutics; Entasis Therapeutics; Albany College of Pharmacy and Health Sciences; Achaogen; U.S. Food and Drug Administration; Amplyx; University of North Texas; Medicines Company; Roivant Sciences; Nabriva Therapeutics; BD; GenePOC; Boston Pharmaceuticals; Novartis; Harvard University; F. Hoffmann-La Roche; Allergan; Cidara Therapeutics; University of Southern California; GlaxoSmithKline; Bayer","keywords":"Echinocandin; Anidulafungin; Microbiology; Candida dubliniensis; Candida parapsilosis; Candida krusei; Candida tropicalis; Broth microdilution; Candida glabrata; Biology; Micafungin; Caspofungin; Fluconazole; Aspergillus fumigatus; Cryptococcus neoformans; Candida albicans; Corpus albicans; Minimum inhibitory concentration; Antimicrobial; Antifungal","score_opus":0.04492092114504406,"score_gpt":0.30234790266308,"score_spread":0.2574269815180359,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004193413","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943603,0.0001645026,0.0001239314,0.0032662037,0.0000928056,0.0012983361,0.00009431824,0.0000905823,0.00050898903],"genre_scores_gemma":[0.9885657,0.00083795213,0.00044310465,0.009719214,0.00013664034,0.000007620522,0.000043060107,0.000046200108,0.00020054575],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99822,0.00006799424,0.00045635892,0.000650197,0.00020494072,0.0004005086],"domain_scores_gemma":[0.99884087,0.000077424585,0.00024055185,0.00026245165,0.00013380955,0.00044490007],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015415954,0.00036650803,0.0007843816,0.000078001525,0.00016615538,0.000072953684,0.00012430652,0.00016504287,0.00007015792],"category_scores_gemma":[0.00008039888,0.0003129048,0.00014297402,0.000283895,0.00021066038,0.00020952949,0.000098898374,0.00027132937,0.000011829593],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025432974,0.00053718506,0.69618136,0.0005300414,0.00025657145,0.00007656107,0.0009778092,7.610992e-7,0.24438144,0.0000016958525,0.044364277,0.010148995],"study_design_scores_gemma":[0.005095358,0.0013192334,0.81553453,0.0007937237,0.000094281364,0.00003207436,0.00031434876,0.00038308694,0.17054977,0.0000027529827,0.0053509865,0.00052987516],"about_ca_topic_score_codex":0.00009872151,"about_ca_topic_score_gemma":0.000021158892,"teacher_disagreement_score":0.11935316,"about_ca_system_score_codex":0.000035144123,"about_ca_system_score_gemma":0.00018487402,"threshold_uncertainty_score":0.9999323},"labels":[],"label_agreement":null},{"id":"W3005048641","doi":"10.1128/mbio.03202-19","title":"Reducing Aspergillus fumigatus Virulence through Targeted Dysregulation of the Conidiation Pathway","year":2020,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; Hospital for Sick Children; University of Toronto; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Cystic Fibrosis Canada; Canada Research Chairs; Government of Canada; Burroughs Wellcome Fund","keywords":"Conidiation; Aspergillus fumigatus; Virulence; Biology; Microbiology; Downregulation and upregulation; Gliotoxin; Virulence factor; Cell biology; Gene; Biochemistry","score_opus":0.02735419744198047,"score_gpt":0.2524518998420246,"score_spread":0.22509770240004412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3005048641","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99375325,0.00035391163,0.00054751703,0.0026533287,0.000120684024,0.00024570106,0.000012060636,0.000033244018,0.0022802777],"genre_scores_gemma":[0.9986321,0.000021997748,0.00031680314,0.0006946898,0.00009663936,0.00000253573,0.000014710686,0.000007751902,0.0002128244],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992092,0.00004435043,0.0002168907,0.00018598374,0.0002297699,0.0001137797],"domain_scores_gemma":[0.9994922,0.00002942229,0.00010001476,0.00023755671,0.00009578201,0.000044976143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010195223,0.00007394669,0.00015982386,0.000007765005,0.00006613177,0.000005560723,0.00006733371,0.000064041684,0.00011897703],"category_scores_gemma":[0.00034197938,0.00005110718,0.0000827168,0.00021772683,0.00008763576,0.000084129744,0.000026767297,0.0001127993,0.000018524515],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026791278,0.00006461342,0.10953758,0.00018149476,0.000029618512,0.0000035725793,0.0028430938,0.00007302597,0.8805006,0.0017408753,0.00079411565,0.003963467],"study_design_scores_gemma":[0.0004777664,0.00012837055,0.6015119,0.00009329735,0.00003340039,0.0000012732025,0.00033825324,0.0011627034,0.3943031,0.00028018883,0.0015942936,0.00007545714],"about_ca_topic_score_codex":0.000063240775,"about_ca_topic_score_gemma":0.000009328436,"teacher_disagreement_score":0.4919743,"about_ca_system_score_codex":0.000043881984,"about_ca_system_score_gemma":0.0001021524,"threshold_uncertainty_score":0.20840903},"labels":[],"label_agreement":null},{"id":"W3005156440","doi":"10.1097/inf.0000000000002568","title":"Safety, Efficacy and Pharmacokinetics of Anidulafungin in Patients 1 Month to &lt;2 Years of Age With Invasive Candidiasis, Including Candidemia","year":2020,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, Los Angeles; Astellas Pharma; University of Alberta; Teva Pharmaceutical Industries; Gilead Sciences; Sanofi; GlaxoSmithKline; Pfizer","keywords":"Anidulafungin; Medicine; Pharmacokinetics; Invasive candidiasis; Fluconazole; Adverse effect; Internal medicine; Antifungal; Dermatology; Micafungin","score_opus":0.013339681692414906,"score_gpt":0.26199346099337,"score_spread":0.2486537793009551,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3005156440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985496,0.00046828334,0.000060718492,0.00027444522,0.000044383574,0.0004709996,0.000034696175,0.0000084083895,0.000088460125],"genre_scores_gemma":[0.9983241,0.0011186174,0.00004299437,0.00028827917,0.00019914238,0.0000028188822,0.000003920521,0.000015420334,0.000004731699],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987838,0.000095044095,0.0004029087,0.0001532474,0.00036348272,0.00020148557],"domain_scores_gemma":[0.99885386,0.00022367232,0.00021708185,0.00012755035,0.00015029208,0.00042755867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021935873,0.00012372101,0.00033581548,0.00014062042,0.00006684575,0.000012136323,0.00008456676,0.000033778706,0.000027092014],"category_scores_gemma":[0.0008794259,0.00008803361,0.00006254498,0.00051263324,0.00006468313,0.000060979066,0.00006773272,0.00029173365,0.0000013661588],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003053118,0.00021235792,0.9930872,0.00018045955,0.00005258721,0.00008886439,0.0013644014,0.00050634245,0.00028070062,0.000004089345,0.00029836394,0.00087152974],"study_design_scores_gemma":[0.003989829,0.00077994185,0.9943912,0.000071908864,0.0004270848,0.000007983178,0.0000997346,0.000035998895,0.00006216483,0.000024291043,0.000019768644,0.00009006418],"about_ca_topic_score_codex":0.00009362799,"about_ca_topic_score_gemma":0.00009697098,"teacher_disagreement_score":0.0013040444,"about_ca_system_score_codex":0.000096405696,"about_ca_system_score_gemma":0.00034662845,"threshold_uncertainty_score":0.35899064},"labels":[],"label_agreement":null},{"id":"W3005406464","doi":"10.3389/fcimb.2020.00028","title":"What Are the Functions of Chitin Deacetylases in Aspergillus fumigatus?","year":2020,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Institutes of Health; National Eye Institute; Fondation pour la Recherche Médicale; Alliance Nationale pour les Sciences de la Vie et de la Santé","keywords":"Aspergillus fumigatus; Virulence; Chitin; Cell wall; Microbiology; Conidiation; Biology; Chitosan; Mutant; Glucosamine; Biochemistry; Gene","score_opus":0.013258843019317332,"score_gpt":0.2271297459194861,"score_spread":0.21387090290016875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3005406464","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906404,0.0047754105,0.0020699096,0.001477656,0.00059256953,0.0002305668,0.000009558426,0.000013016862,0.00019093657],"genre_scores_gemma":[0.99725175,0.001850497,0.00009239339,0.0005477024,0.00006386154,0.000006671441,0.000036920952,0.000006688688,0.00014349603],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992271,0.000111823356,0.00025198612,0.00022543315,0.000029069195,0.00015456334],"domain_scores_gemma":[0.99969625,0.000033215005,0.00007092747,0.00012185936,0.000033644515,0.000044113873],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016339385,0.000097769676,0.0002958195,0.00008411842,0.000045838748,0.000008620441,0.000034407887,0.00012915158,0.000047515634],"category_scores_gemma":[0.00011000154,0.00007190508,0.00007075105,0.0002499381,0.00023468418,0.00008426481,0.000027760569,0.00025814614,0.000005234505],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022094233,0.00008410502,0.8731969,0.00008569148,0.000024043937,0.000007592026,0.00034342776,0.000020072106,0.12209921,0.000020257316,0.0023432767,0.0015544756],"study_design_scores_gemma":[0.0043587647,0.0009913906,0.8430365,0.00037090227,0.00012535935,0.00006628284,0.01268873,0.0006385173,0.08755169,0.00020771677,0.049612008,0.00035216703],"about_ca_topic_score_codex":0.0000688432,"about_ca_topic_score_gemma":0.00020632547,"teacher_disagreement_score":0.04726873,"about_ca_system_score_codex":0.00003955781,"about_ca_system_score_gemma":0.000034751127,"threshold_uncertainty_score":0.2932204},"labels":[],"label_agreement":null},{"id":"W3006825747","doi":"10.1128/msphere.00913-19","title":"Metabolic Reprogramming in the Opportunistic Yeast Candida albicans in Response to Hypoxia","year":2020,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Government of Canada; Fondation CHU de Québec; Centre Hospitalier Universitaire de Québec; Natural Sciences and Engineering Research Council of Canada","keywords":"Lipidome; Metabolome; Candida albicans; Biology; Metabolomics; Ergosterol; Biochemistry; Metabolic pathway; Pentose phosphate pathway; Yeast; Cell biology; Microbiology; Lipidomics; Metabolism; Glycolysis; Bioinformatics","score_opus":0.04365688164241893,"score_gpt":0.30098017254226916,"score_spread":0.25732329089985023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3006825747","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98370904,0.0004427202,0.00008426913,0.011993027,0.000026563464,0.0004702388,0.000009899301,0.000026599653,0.003237667],"genre_scores_gemma":[0.9944022,0.000021118112,0.00035285033,0.004347056,0.00006594984,0.000035019497,0.0000065344966,0.0000132676605,0.00075597415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987303,0.00018868705,0.0002590666,0.0003131185,0.00024075744,0.00026805187],"domain_scores_gemma":[0.99928313,0.0001102181,0.000029719924,0.00037044726,0.000027340888,0.00017914629],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071868167,0.00011003327,0.000270922,0.000029195357,0.000033371805,0.000020426109,0.00014569472,0.000052595657,0.00029974736],"category_scores_gemma":[0.0012365098,0.00007831591,0.00005932317,0.0005857074,0.000046883844,0.000032655178,0.00003252022,0.00024986744,0.00006675694],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010782988,0.00043306843,0.826035,0.000194192,0.00004200646,0.0028917808,0.017124306,0.000023537681,0.047019493,0.0007335195,0.0053157723,0.089404345],"study_design_scores_gemma":[0.00079314475,0.00022616748,0.87929296,0.00009172121,0.000027689297,0.000010266308,0.0065099252,0.00009712482,0.00010711379,0.000034719706,0.112691104,0.00011804583],"about_ca_topic_score_codex":0.0005098038,"about_ca_topic_score_gemma":0.0036151316,"teacher_disagreement_score":0.10737533,"about_ca_system_score_codex":0.000046295616,"about_ca_system_score_gemma":0.00019725483,"threshold_uncertainty_score":0.32820234},"labels":[],"label_agreement":null},{"id":"W3007138041","doi":"10.1007/978-3-030-01751-4_44-1","title":"Aspergillus in Solid Organ and Stem Cell Transplant Patients: Emerging Options for Diagnosis and Management","year":2020,"lang":"en","type":"book-chapter","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Intensive care medicine; Stem cell; Medicine; Solid organ; Organ transplantation; Transplantation; Internal medicine; Biology; Cell biology","score_opus":0.02130487986159956,"score_gpt":0.2510563861702117,"score_spread":0.22975150630861213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3007138041","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14904028,0.00988338,0.0022406303,0.004580496,0.0004075637,0.010487454,0.0010507868,0.000240332,0.82206905],"genre_scores_gemma":[0.81087077,0.030833773,0.0008220757,0.00071301725,0.00007028569,0.000117208074,0.00023031601,0.000075187025,0.15626739],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988406,0.0000067808296,0.0003389667,0.00047055102,0.00016814812,0.00017496369],"domain_scores_gemma":[0.9995247,0.000057180867,0.000058693444,0.00016956379,0.00004853285,0.00014132872],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007843637,0.0002399594,0.00044777457,0.00010595245,0.00006305043,0.000015300504,0.000042767115,0.00014037841,0.00015601191],"category_scores_gemma":[0.000003390263,0.00020499593,0.00008114344,0.000025127187,0.000056140332,0.00004182813,0.00003847975,0.00016116172,0.0000072243556],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036018742,0.0015234646,0.49298158,0.040046964,0.001667021,0.00094571384,0.0067478092,0.0000078335715,0.00026501648,0.24625672,0.015677828,0.19027817],"study_design_scores_gemma":[0.03556476,0.0065322113,0.31836253,0.014275508,0.0071020657,0.000022870094,0.0052454555,0.0010051411,0.0018821115,0.0087014055,0.5963931,0.0049128295],"about_ca_topic_score_codex":0.000009281205,"about_ca_topic_score_gemma":0.00019950084,"teacher_disagreement_score":0.6658017,"about_ca_system_score_codex":0.00005923135,"about_ca_system_score_gemma":0.000018008299,"threshold_uncertainty_score":0.8359492},"labels":[],"label_agreement":null},{"id":"W3007821104","doi":"10.1101/2020.02.18.955534","title":"Mutations in <i>TAC1B</i> : a novel genetic determinant of clinical fluconazole resistance in <i>C. auris</i>","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention; National Institutes of Health; Broad Institute; Canadian Institute for Advanced Research","keywords":"Fluconazole; Candida auris; Biology; Microbiology; Gene; Genetics; Antifungal","score_opus":0.03709095605710347,"score_gpt":0.3034521961447536,"score_spread":0.26636124008765016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3007821104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947683,0.0017570634,0.0009982933,0.0005066525,0.0004049848,0.0011543507,0.00027850247,0.000083961444,0.000047869613],"genre_scores_gemma":[0.98335314,0.00047035216,0.015336549,0.00040445878,0.00020837439,0.00013007104,8.375887e-7,0.0000842585,0.000011950683],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9953724,0.00018504517,0.0020892299,0.0012859997,0.00052942766,0.0005378944],"domain_scores_gemma":[0.9970141,0.0002506856,0.00064972474,0.0013444284,0.00039718402,0.00034386772],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010345515,0.00047651847,0.0015687726,0.00027831914,0.000042590556,0.00003193832,0.00041331473,0.0006651199,0.000032438078],"category_scores_gemma":[0.0014433776,0.00050913414,0.00033806136,0.0008409942,0.00031630252,0.000085822256,0.00031039127,0.0014418242,0.000021960304],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000704778,0.0010232803,0.6860375,0.0020833914,0.00007305269,0.0005853533,0.000047987858,0.000024617422,0.30910042,0.00015847568,0.0001525928,0.000008555686],"study_design_scores_gemma":[0.0022574128,0.00009207474,0.96698654,0.0017343975,0.00012369051,1.9817993e-8,0.000009193404,0.00037385922,0.026839249,0.000008352809,0.0011497145,0.00042549043],"about_ca_topic_score_codex":0.00015224317,"about_ca_topic_score_gemma":0.00041986766,"teacher_disagreement_score":0.28226116,"about_ca_system_score_codex":0.0002468083,"about_ca_system_score_gemma":0.00214174,"threshold_uncertainty_score":0.999736},"labels":[],"label_agreement":null},{"id":"W3007996303","doi":"10.1097/tp.0000000000003187","title":"Late Onset Invasive Pulmonary Aspergillosis in Lung Transplant Recipients in the Setting of a Targeted Prophylaxis/Preemptive Antifungal Therapy Strategy","year":2020,"lang":"en","type":"article","venue":"Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Lung transplantation; Interquartile range; Aspergillosis; Bronchoalveolar lavage; Incidence (geometry); Transplantation; Galactomannan; Internal medicine; Surgery; Retrospective cohort study; Lung; Mortality rate; Bronchoscopy; Immunology","score_opus":0.027776495190848616,"score_gpt":0.2766108789120156,"score_spread":0.24883438372116695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3007996303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973837,0.00032477532,0.00010649687,0.0004946791,0.000026781787,0.0009970311,0.00018654618,0.00002089986,0.0004590721],"genre_scores_gemma":[0.9976407,0.0015648174,0.000083509745,0.00027999308,0.000024719007,0.000034548102,0.00034650814,0.000015844109,0.000009336231],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99823546,0.00029485117,0.0005022915,0.00034288154,0.00037335983,0.0002511634],"domain_scores_gemma":[0.9994017,0.00021806147,0.000106284926,0.00015011421,0.00006233208,0.00006150153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041000918,0.00018345284,0.00034987123,0.00012123943,0.000045152767,0.000010689188,0.00013276837,0.000120657365,0.000052013685],"category_scores_gemma":[0.00003474507,0.00013343777,0.000099652476,0.00063993636,0.00006658184,0.00016574902,0.0000030736544,0.00037200228,0.000004336138],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0052664867,0.00024717112,0.8874505,0.0005370235,0.00003554798,0.00036210328,0.020776335,0.00016352386,0.08392862,0.0000141914115,0.0000061621686,0.0012122896],"study_design_scores_gemma":[0.0019777028,0.0005423007,0.97368294,0.00045603627,0.000048427508,0.00001843656,0.0011513012,0.001068456,0.020884667,0.000040309886,7.6854616e-7,0.00012865348],"about_ca_topic_score_codex":0.00027770738,"about_ca_topic_score_gemma":0.00069374806,"teacher_disagreement_score":0.086232394,"about_ca_system_score_codex":0.00004171168,"about_ca_system_score_gemma":0.00013046381,"threshold_uncertainty_score":0.54414344},"labels":[],"label_agreement":null},{"id":"W3008082660","doi":"10.1128/msphere.00062-20","title":"Nucleotide Excision Repair Protein Rad23 Regulates Cell Virulence Independent of Rad4 in Candida albicans","year":2020,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Virulence; Candida albicans; Nucleotide excision repair; Microbiology; Biology; Gene; DNA repair; Genetics","score_opus":0.015129738315740502,"score_gpt":0.2433463645208688,"score_spread":0.2282166262051283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3008082660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99310637,0.00079528615,0.00011060555,0.00078471587,0.000024855728,0.0006021299,0.000008237423,0.00006661425,0.00450121],"genre_scores_gemma":[0.9967355,0.000057961857,0.0010644159,0.0002702097,0.000047505368,0.0000111797135,0.0000049561363,0.000019190098,0.0017890721],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99852914,0.00006795175,0.0004116343,0.00038579325,0.00037511627,0.00023039017],"domain_scores_gemma":[0.9992558,0.000040865336,0.00010408892,0.0003678418,0.000066855515,0.0001645784],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021834491,0.00014446418,0.00037579454,0.000023286522,0.000030317093,0.0000062465697,0.00012274906,0.00010721196,0.0010114815],"category_scores_gemma":[0.00020876982,0.00012163876,0.0001311585,0.00028012498,0.000090934656,0.00007470566,0.000059643677,0.000254498,0.00004638465],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018362205,0.0003587689,0.4557299,0.0011082188,0.000026774242,0.00027549473,0.0015327927,0.000035758174,0.53229713,0.00008750688,0.0025510818,0.004160373],"study_design_scores_gemma":[0.003329772,0.0010090667,0.7311745,0.001130937,0.00005499165,0.0000047941176,0.002656431,0.001159875,0.25418818,0.00034630505,0.0045969253,0.00034818545],"about_ca_topic_score_codex":0.0006139031,"about_ca_topic_score_gemma":0.0007675339,"teacher_disagreement_score":0.27810892,"about_ca_system_score_codex":0.00007870499,"about_ca_system_score_gemma":0.00015297817,"threshold_uncertainty_score":0.9999017},"labels":[],"label_agreement":null},{"id":"W3008642437","doi":"10.1007/82_2020_199","title":"Exopolysaccharides and Biofilms","year":2020,"lang":"en","type":"review","venue":"Current topics in microbiology and immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Biofilm; Microbiology; Candida albicans; Antifungal; Biology; Bacteria","score_opus":0.05198542779479307,"score_gpt":0.3512347039353216,"score_spread":0.2992492761405285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3008642437","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0029298519,0.9957699,0.0000051539846,0.0001987411,0.00055305526,0.0004068432,0.00003670501,0.000020549109,0.00007915777],"genre_scores_gemma":[0.00028005216,0.9991392,0.00006359675,0.000067543435,0.00011625339,0.000020221158,0.00014052629,0.000013414732,0.0001592271],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985556,0.00015606421,0.00046712326,0.0005287081,0.00001683347,0.0002756593],"domain_scores_gemma":[0.99946654,0.00010414633,0.00012057823,0.00023465227,0.000022343036,0.000051767183],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012382041,0.00029189955,0.0015913288,0.00014458419,0.000050057562,0.00000770097,0.000104535015,0.0005836491,0.00005110473],"category_scores_gemma":[0.0001323559,0.00022328028,0.00013138163,0.00012440667,0.0005970631,0.000022743441,0.00018557838,0.00096385274,0.000026771364],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034173216,0.00005086789,0.0017898685,0.0052454346,0.00010647749,0.000031139145,0.000056982495,3.5404574e-10,0.00038533667,0.0009487687,0.00016859372,0.9911824],"study_design_scores_gemma":[0.0003297925,0.00015412056,0.00054807053,0.0024195847,0.00021696789,0.0003546617,0.000023157038,2.2352704e-7,0.000016242197,0.0000878582,0.99567044,0.00017887261],"about_ca_topic_score_codex":0.0000039250185,"about_ca_topic_score_gemma":0.000009738494,"teacher_disagreement_score":0.9955019,"about_ca_system_score_codex":0.00004697989,"about_ca_system_score_gemma":0.0001595719,"threshold_uncertainty_score":0.91051054},"labels":[],"label_agreement":null},{"id":"W3011746056","doi":"10.1128/aac.00261-20","title":"Enhanced Efflux Pump Expression in <i>Candida</i> Mutants Results in Decreased Manogepix Susceptibility","year":2020,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada; Amplyx","keywords":"Efflux; Candida albicans; Mutant; Candida parapsilosis; Biology; Gene; Microbiology; Corpus albicans; Transcription factor; Transporter; ATP-binding cassette transporter; Genetics","score_opus":0.01810413515031307,"score_gpt":0.27180739481297506,"score_spread":0.253703259662662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3011746056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99359316,0.000030370436,0.00011384196,0.004715219,0.000051643212,0.0006351167,0.000039580846,0.000043710483,0.0007773601],"genre_scores_gemma":[0.9856961,0.0007972007,0.00026566308,0.0129073085,0.00008938492,0.00000643743,0.00005357156,0.00002864542,0.00015573886],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979685,0.000082023194,0.0005810655,0.00074248714,0.00020954481,0.0004163719],"domain_scores_gemma":[0.9992418,0.00005283535,0.00010460185,0.0003139698,0.000046523237,0.00024025259],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027829886,0.00026687997,0.00055316155,0.00007409478,0.00006005175,0.000028557566,0.000121273464,0.00017994855,0.00020749125],"category_scores_gemma":[0.00012510792,0.0002290823,0.00010425808,0.00033642483,0.00012611439,0.000121030185,0.00004503079,0.00028214988,0.00001981711],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00586646,0.000512253,0.38579327,0.00018075622,0.000015833242,0.00006774847,0.0015308382,0.0000022858305,0.5996201,0.0000021061492,0.0027238156,0.0036845282],"study_design_scores_gemma":[0.00935661,0.00021470894,0.66743886,0.0003411108,0.000010481704,0.0000037085115,0.00015839243,0.00011431421,0.3206709,0.000020663256,0.0014436474,0.00022655149],"about_ca_topic_score_codex":0.00018113146,"about_ca_topic_score_gemma":0.00034178965,"teacher_disagreement_score":0.28164563,"about_ca_system_score_codex":0.0000760368,"about_ca_system_score_gemma":0.000089641704,"threshold_uncertainty_score":0.93417054},"labels":[],"label_agreement":null},{"id":"W3011784154","doi":"10.2174/1381612826666200311130812","title":"Development of an Oral Amphotericin B Formulation as an Alternative Approach to Parenteral Amphotericin B Administration in the Treatment of Blood-Borne Fungal Infections","year":2020,"lang":"en","type":"article","venue":"Current Pharmaceutical Design","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Amphotericin B; Medicine; Intensive care medicine; Drug; Oral administration; Antifungal; Pharmacology; Dermatology","score_opus":0.21417126099285114,"score_gpt":0.43072515456451577,"score_spread":0.21655389357166463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3011784154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9581415,0.00007342095,0.04016109,0.00013169624,0.000069306116,0.0012926969,0.00001781289,0.000020855128,0.000091628666],"genre_scores_gemma":[0.99181384,0.000043813547,0.007665142,0.00016470111,0.00007938705,0.000088245026,0.00013022359,0.000011574579,0.0000030528965],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981851,0.00028573358,0.00057517726,0.00035965667,0.00036722553,0.00022711002],"domain_scores_gemma":[0.99924237,0.000072629984,0.00010769074,0.00020570063,0.00010579734,0.0002658271],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032203208,0.00019823514,0.00035464636,0.00008205529,0.000058219182,0.000019024817,0.00012384346,0.000048455506,0.000033696597],"category_scores_gemma":[0.000064315194,0.00013996256,0.0000788909,0.0003715888,0.00005874561,0.00017113525,0.000013515776,0.00013641469,0.0000055209593],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.021499421,0.068589956,0.09892713,0.0010960352,0.0004983783,0.00007097318,0.08224416,0.0012296801,0.34402406,0.002528754,0.0000838114,0.37920764],"study_design_scores_gemma":[0.009324221,0.02274928,0.31973317,0.00019833723,0.00073271187,0.00003762133,0.0019261233,0.07859976,0.5635168,0.00019552099,0.0024520324,0.00053443626],"about_ca_topic_score_codex":0.000016647491,"about_ca_topic_score_gemma":0.000016282076,"teacher_disagreement_score":0.3786732,"about_ca_system_score_codex":0.00009987743,"about_ca_system_score_gemma":0.0002319056,"threshold_uncertainty_score":0.5707508},"labels":[],"label_agreement":null},{"id":"W3012151770","doi":"10.1001/jama.2020.0175","title":"Prophylaxis Against Invasive Fungal Disease for Neutropenic Children and Young Adults—Reply","year":2020,"lang":"en","type":"letter","venue":"JAMA","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Disease; Intensive care medicine; Pediatrics; Internal medicine","score_opus":0.011952454177600024,"score_gpt":0.23767976988001666,"score_spread":0.22572731570241664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012151770","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38037902,0.0024003987,0.0000300801,0.6106933,0.0003381039,0.0038984884,0.0015233933,0.0001409161,0.0005963342],"genre_scores_gemma":[0.38737646,0.00040394897,0.00017742137,0.6002772,0.006314036,0.00016591612,0.0022409286,0.00010491337,0.0029392038],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99746186,0.000082084574,0.0004333503,0.0010613106,0.00046353665,0.0004978596],"domain_scores_gemma":[0.99831975,0.00016814482,0.00019556347,0.0006793461,0.0002726867,0.0003645128],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010903738,0.00045593418,0.00076387014,0.00008914479,0.00015586286,0.00010925491,0.00021975995,0.00042150775,0.000050099192],"category_scores_gemma":[0.0012572927,0.00037499843,0.0003845727,0.00014360818,0.0002155435,0.00014087319,0.0001248009,0.0015777651,0.00005765558],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024912048,0.000052998326,0.11587708,0.002155645,0.00019321182,0.0011258993,0.00014708002,6.3472484e-8,0.0001162706,0.00000478127,0.86971796,0.008117806],"study_design_scores_gemma":[0.0061031305,0.0014359512,0.8011462,0.0012141786,0.00069111114,0.000042455078,0.0000719237,0.000035468416,0.00014592816,0.0001151015,0.18818493,0.00081362546],"about_ca_topic_score_codex":0.00006328702,"about_ca_topic_score_gemma":0.000039550116,"teacher_disagreement_score":0.6852691,"about_ca_system_score_codex":0.00011346753,"about_ca_system_score_gemma":0.0005141412,"threshold_uncertainty_score":0.9998702},"labels":[],"label_agreement":null},{"id":"W3014209777","doi":"10.1016/j.healun.2020.01.106","title":"Voriconazole Associated Adverse Drug Events and Drug Monitoring in Lung Transplant (LTx) Recipients","year":2020,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver General Hospital","funders":"","keywords":"Medicine; Voriconazole; Drug; Lung transplantation; Adverse effect; Lung; Intensive care medicine; Therapeutic drug monitoring; Internal medicine; Pharmacology; Dermatology; Antifungal","score_opus":0.0142055083800128,"score_gpt":0.2735633339933957,"score_spread":0.25935782561338294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014209777","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960922,0.0013774005,0.00009483675,0.0020912986,0.00011575958,0.0001805791,0.0000103731245,0.000007405054,0.00003012048],"genre_scores_gemma":[0.996857,0.0028362887,0.000050949224,0.000116441486,0.00008117775,8.492653e-7,0.0000066754146,0.000007962445,0.00004266158],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99900705,0.00014112034,0.00035040104,0.0000969081,0.0002634043,0.00014111833],"domain_scores_gemma":[0.9995386,0.00014114611,0.00009879993,0.000047496196,0.000055432447,0.000118521944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069828203,0.00009781219,0.00024712938,0.00005690421,0.00008231546,0.000006563633,0.0000427852,0.000039568335,0.00000831308],"category_scores_gemma":[0.000026087439,0.00006804018,0.000052924497,0.00012663282,0.000030176754,0.00017660517,0.0000034520867,0.00029694743,8.093341e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018835223,0.000048249785,0.9743,0.00022393872,0.000048429712,0.00003953389,0.010936837,0.000022586757,0.012277558,0.000002290578,0.00010476315,0.000112244394],"study_design_scores_gemma":[0.0022375681,0.00008394926,0.9933628,0.00066387653,0.00031627898,0.00006857378,0.00061451993,0.000451199,0.0021043278,0.000017029488,0.000013734631,0.00006615083],"about_ca_topic_score_codex":0.00004702438,"about_ca_topic_score_gemma":0.000060438637,"teacher_disagreement_score":0.019062744,"about_ca_system_score_codex":0.000039948984,"about_ca_system_score_gemma":0.000040151976,"threshold_uncertainty_score":0.2774598},"labels":[],"label_agreement":null},{"id":"W3014222253","doi":"10.1016/j.healun.2020.01.046","title":"Molecular Identification of Aspergillus Fumigatus Complex from Lung Transplant Recipients Using Multi Locus Sequencing Analysis (MLSA)","year":2020,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Public Health Ontario; Mount Sinai Hospital","funders":"","keywords":"Aspergillus fumigatus; Microbiology; Biology; Aspergillus; Aspergillosis; Sputum; Medicine; Immunology; Tuberculosis; Pathology","score_opus":0.04816363814518636,"score_gpt":0.3154686071123418,"score_spread":0.26730496896715544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014222253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9068382,0.0010335433,0.091474295,0.00039309662,0.000042164673,0.00014569554,0.000060634742,0.000006090338,0.0000062701843],"genre_scores_gemma":[0.99763113,0.00061891985,0.0014995063,0.00013992374,0.000043139273,3.297364e-7,0.00005526361,0.000009014777,0.0000027968726],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99859655,0.0001613577,0.00063352333,0.00012881949,0.00036010033,0.00011965083],"domain_scores_gemma":[0.9992472,0.0000956563,0.0002660771,0.00011762716,0.00016104945,0.00011238541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004713868,0.000109752,0.0003920029,0.00010968371,0.000091334616,0.000013679339,0.00007077895,0.00005795415,0.000028128057],"category_scores_gemma":[0.0000204493,0.000078619916,0.00017844274,0.00029658896,0.000074350486,0.00013376247,0.0000034526176,0.00019258034,6.2102e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016635165,0.000029527464,0.14844726,0.00017533875,0.00048902695,0.00003204467,0.005063141,0.00202556,0.84198517,0.0000042808488,0.00000581414,0.00007929829],"study_design_scores_gemma":[0.0017693262,0.00013032283,0.7924308,0.00025975736,0.0072036465,0.00008414356,0.0006428678,0.08855453,0.10880055,0.000015608668,0.0000034960208,0.0001049513],"about_ca_topic_score_codex":0.00016096981,"about_ca_topic_score_gemma":0.000060341965,"teacher_disagreement_score":0.73318464,"about_ca_system_score_codex":0.000052258332,"about_ca_system_score_gemma":0.00006937188,"threshold_uncertainty_score":0.3206027},"labels":[],"label_agreement":null},{"id":"W3015094475","doi":"10.17126/joralres.2020.009","title":"Efficacy of copper sulphate on Candida albicans on heat-polymerized acrylic resin","year":2020,"lang":"en","type":"article","venue":"Journal Of Oral Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Sodium hypochlorite; Candida albicans; Acrylic resin; Chlorhexidine; Chemistry; Nuclear chemistry; Nystatin; Minimum inhibitory concentration; Corpus albicans; Copper; Distilled water; Microbiology; Chromatography; Medicine; Dentistry; In vitro; Biology; Biochemistry; Organic chemistry","score_opus":0.1848734263341844,"score_gpt":0.4451553088551851,"score_spread":0.2602818825210007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015094475","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97620547,0.00045116965,0.000012242354,0.019162089,0.00006342515,0.000267395,0.000010744525,0.0000072632006,0.0038202202],"genre_scores_gemma":[0.9974802,0.00032252324,0.00013867175,0.0007760678,0.00024225321,0.000001372823,0.0000024283318,0.000022116341,0.0010143318],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9965712,0.00035911344,0.0005982605,0.00022750015,0.0018072665,0.00043669622],"domain_scores_gemma":[0.99780136,0.0006094507,0.00012466245,0.0003082883,0.00059933803,0.00055690046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016866609,0.00013659812,0.0006221325,0.0002432612,0.00009454223,0.000023119388,0.00025293123,0.00009814139,0.00055924203],"category_scores_gemma":[0.003080587,0.000093067094,0.00025468963,0.00061090634,0.00029038786,0.00007575818,0.00004779803,0.0011492807,0.00006799435],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.121457905,0.0017724297,0.03638979,0.0003851607,0.00035842054,0.0013511907,0.0014146537,0.000040714272,0.7560578,0.00056489726,0.058468338,0.0217387],"study_design_scores_gemma":[0.023522155,0.03593233,0.5798684,0.001967607,0.000159548,0.000072710034,0.0017025137,0.00025352812,0.31442028,0.00015937907,0.04156243,0.0003791447],"about_ca_topic_score_codex":0.00014142599,"about_ca_topic_score_gemma":0.000024087225,"teacher_disagreement_score":0.54347855,"about_ca_system_score_codex":0.00016002412,"about_ca_system_score_gemma":0.00075844437,"threshold_uncertainty_score":0.61233085},"labels":[],"label_agreement":null},{"id":"W3015328062","doi":"10.1128/msphere.00153-20","title":"Functional Characterization of Clinical Isolates of the Opportunistic Fungal Pathogen Aspergillus nidulans","year":2020,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"National Institute on Aging; European Regional Development Fund; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Universidade Federal de Minas Gerais; Ministério da Ciência, Tecnologia e Inovação; AW Howard Memorial Trust; Fundação de Amparo à Pesquisa do Estado de São Paulo; Howard Hughes Medical Institute","keywords":"Aspergillus nidulans; Virulence; Biology; Microbiology; Context (archaeology); Aspergillus; Chronic granulomatous disease; Aspergillus fumigatus; Gene; Genetics","score_opus":0.08270442474911646,"score_gpt":0.30604422771076206,"score_spread":0.2233398029616456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015328062","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954836,0.00006105992,0.00088854425,0.0012869847,0.00016512985,0.00017605822,0.000117987285,0.00001544808,0.0018051972],"genre_scores_gemma":[0.9981857,0.0000417751,0.000072142604,0.00055898685,0.0001899194,0.0000018454256,0.00006062274,0.000009540302,0.0008794983],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99895984,0.0000696628,0.000494642,0.00017386451,0.00020934377,0.00009264908],"domain_scores_gemma":[0.99928874,0.000059092115,0.00019075752,0.00022156921,0.00014518495,0.00009462958],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001822711,0.000078657904,0.0003103408,0.00000534501,0.00003355817,0.0000026370603,0.000076347445,0.00008883997,0.0011786186],"category_scores_gemma":[0.00040707862,0.00005163521,0.00019060072,0.00012757897,0.00013067032,0.000033472883,0.000037026413,0.00014873718,0.000017083803],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004676643,0.00011386144,0.74622697,0.00016036919,0.00004579359,0.000005229431,0.00008656071,0.0000016039356,0.24832179,0.0002332576,0.0003893505,0.003947539],"study_design_scores_gemma":[0.0005000761,0.00022936809,0.9939372,0.00006880068,0.00008288913,0.0000029295022,0.00012021958,0.00058845675,0.0025433663,0.000026199014,0.0018504498,0.00005006706],"about_ca_topic_score_codex":0.000005734438,"about_ca_topic_score_gemma":0.000008977628,"teacher_disagreement_score":0.2477102,"about_ca_system_score_codex":0.000008737883,"about_ca_system_score_gemma":0.00019210957,"threshold_uncertainty_score":0.99973446},"labels":[],"label_agreement":null},{"id":"W3015933272","doi":"10.1128/msphere.00256-20","title":"Oxadiazole-Containing Macrocyclic Peptides Potentiate Azole Activity against Pathogenic <i>Candida</i> Species","year":2020,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Government of Canada","keywords":"Azole; Fluconazole; Candida albicans; Efflux; Fungal pathogen; Microbiology; Antimicrobial; Biology; Chemistry; Antifungal; Pathogen; Biochemistry","score_opus":0.02847863867963116,"score_gpt":0.248045119907039,"score_spread":0.21956648122740785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3015933272","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9700254,0.0010236586,0.00044382276,0.0018238082,0.00009396166,0.0003133628,0.000036500413,0.00019055404,0.026048893],"genre_scores_gemma":[0.99332196,0.0002904977,0.00030405767,0.0032895145,0.00035006145,0.000011962763,0.00002429853,0.000041245552,0.0023663833],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982851,0.000063788306,0.00028949682,0.00051568076,0.0003614391,0.00048450305],"domain_scores_gemma":[0.99899995,0.000055509707,0.000110544264,0.000373157,0.00007889902,0.00038191085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001479323,0.00026546099,0.000494067,0.000021218011,0.00020778926,0.000055159548,0.000154349,0.0001266575,0.0006362566],"category_scores_gemma":[0.00016216625,0.00023746894,0.00028861925,0.0002503014,0.00013105894,0.00017764932,0.00009114736,0.00040593147,0.00036753019],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001292219,0.0001509461,0.36199582,0.000291559,0.0001407735,0.00038800697,0.0008289304,0.000022218623,0.6014935,0.000046674297,0.004297501,0.029051876],"study_design_scores_gemma":[0.0027309577,0.00053112564,0.9049716,0.00025618056,0.00021004998,0.000020212423,0.002829001,0.0007938324,0.057155784,0.00007245579,0.029831404,0.00059740315],"about_ca_topic_score_codex":0.000033414253,"about_ca_topic_score_gemma":0.00019383039,"teacher_disagreement_score":0.5443377,"about_ca_system_score_codex":0.000096042255,"about_ca_system_score_gemma":0.00013781109,"threshold_uncertainty_score":0.9683702},"labels":[],"label_agreement":null},{"id":"W3016732475","doi":"10.1128/mbio.00290-20","title":"The Proteasome Governs Fungal Morphogenesis via Functional Connections with Hsp90 and cAMP-Protein Kinase A Signaling","year":2020,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canada Research Chairs; Government of Canada","keywords":"Proteostasis; Proteasome; Biology; Candida albicans; Virulence; Morphogenesis; Cell biology; Corpus albicans; Hsp90; Regulator; Microbiology; Heat shock protein; Genetics; Gene","score_opus":0.020911997870325452,"score_gpt":0.22134590982496086,"score_spread":0.2004339119546354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3016732475","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892974,0.00050191634,0.0039421218,0.0051570246,0.00003378571,0.0006593567,0.000022087806,0.000062912724,0.00032342115],"genre_scores_gemma":[0.9977722,0.000011278648,0.00027591508,0.00053022575,0.00019820231,0.00007579429,0.0000095268,0.000017295102,0.0011095157],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99899286,0.000042592856,0.00015847979,0.00030499068,0.00029097806,0.00021010115],"domain_scores_gemma":[0.9993888,0.00006507347,0.000054997483,0.00019053592,0.00010548612,0.00019510176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015261442,0.0001332779,0.00017416748,0.000014453257,0.00037278404,0.000038880014,0.000047813573,0.00005707709,0.00018641863],"category_scores_gemma":[0.00017374437,0.000083532264,0.00006137786,0.00018182804,0.00016419958,0.00006076377,0.000029369836,0.00019218244,0.00004216672],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00447208,0.00018491625,0.30664083,0.00024932917,0.00025949607,0.00017818203,0.00045693645,0.000022812323,0.6815657,0.0012164734,0.0013711653,0.0033820902],"study_design_scores_gemma":[0.007205095,0.003846156,0.7770118,0.00041911716,0.0006261511,0.0002901523,0.004423085,0.0033645185,0.16736953,0.00056335644,0.033875793,0.0010052107],"about_ca_topic_score_codex":0.00008905203,"about_ca_topic_score_gemma":0.00016403155,"teacher_disagreement_score":0.51419616,"about_ca_system_score_codex":0.00005300674,"about_ca_system_score_gemma":0.00012421323,"threshold_uncertainty_score":0.34063467},"labels":[],"label_agreement":null},{"id":"W3016811807","doi":"10.1093/cid/ciaa406","title":"Reply to Ku et al","year":2020,"lang":"fr","type":"letter","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Health Services; University of Alberta","funders":"","keywords":"Computer science","score_opus":0.05887993658575708,"score_gpt":0.4037237472339689,"score_spread":0.34484381064821185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3016811807","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.032987095,0.0044334545,0.0007093893,0.9424706,0.008411357,0.0015500305,0.00088050275,0.00054659107,0.008010962],"genre_scores_gemma":[0.12795278,0.0023403547,0.000038619844,0.85117644,0.010776491,0.00008684838,0.0005431065,0.00013292053,0.006952455],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99255985,0.0012997922,0.0020662125,0.0021268092,0.00085708965,0.0010902261],"domain_scores_gemma":[0.99107164,0.0042959373,0.00042150184,0.0015893022,0.00042087058,0.0022007523],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0007771779,0.0008126248,0.0021841694,0.00012544365,0.00024488592,0.00014591598,0.00040974215,0.0006887695,0.0036611112],"category_scores_gemma":[0.021986952,0.0007527221,0.001929444,0.00055353413,0.0009501392,0.00015096384,0.0003850105,0.0037191228,0.011644308],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002699165,0.0008243218,0.4257191,0.00044306775,0.0003178805,0.0016584087,0.000026954547,0.0000032712528,0.0000068340414,0.00008825337,0.565138,0.0055040075],"study_design_scores_gemma":[0.0009990168,0.0018699197,0.35049585,0.00075376214,0.0008475149,0.0000075886837,0.000022192231,0.000024505149,0.000002528615,0.00047466214,0.6440129,0.000489503],"about_ca_topic_score_codex":0.00016865092,"about_ca_topic_score_gemma":0.00007607747,"teacher_disagreement_score":0.0949657,"about_ca_system_score_codex":0.00034094273,"about_ca_system_score_gemma":0.001387753,"threshold_uncertainty_score":0.9994924},"labels":[],"label_agreement":null},{"id":"W3017243919","doi":"10.1139/cjm-2019-0531","title":"The yeast, the antifungal, and the wardrobe: a journey into antifungal resistance mechanisms of <i>Candida tropicalis</i>","year":2020,"lang":"en","type":"review","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Candida tropicalis; Microbiology; Candida albicans; Biology; Antifungal; Yeast; Fluconazole; Azole; Corpus albicans; Genetics","score_opus":0.018447765922213956,"score_gpt":0.2734590212554041,"score_spread":0.25501125533319013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3017243919","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005986019,0.9888709,0.00012031051,0.008578933,0.0006334316,0.0007203229,0.0001900854,0.000004107962,0.0002832627],"genre_scores_gemma":[0.0131629165,0.9843442,0.00015716236,0.00085720007,0.00039229242,0.000006070121,0.000016029579,0.000047070993,0.0010170821],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99657536,0.00092173996,0.0014596351,0.00033921096,0.00016551763,0.0005385607],"domain_scores_gemma":[0.99622864,0.00092577585,0.0012882864,0.00064641336,0.00040990007,0.0005009658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019504622,0.00042379857,0.002382969,0.00013753312,0.0005650121,0.000079140176,0.0009008248,0.0003852583,0.00007324255],"category_scores_gemma":[0.0012183436,0.00017616566,0.0009284652,0.00037437354,0.0024607324,0.000043857654,0.00007290167,0.0016488477,0.000010530103],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005523273,0.00016638225,0.0012366711,0.02517027,0.009519362,0.0036474706,0.004779851,7.547715e-7,0.0062762615,0.07977651,0.46820927,0.39569393],"study_design_scores_gemma":[0.0009485754,0.00016513394,0.000049374554,0.0036908097,0.0013228077,0.0016196662,0.00035486836,4.3331676e-7,0.000058929963,0.0017748195,0.98984736,0.00016722029],"about_ca_topic_score_codex":0.0004314809,"about_ca_topic_score_gemma":0.024989901,"teacher_disagreement_score":0.5216381,"about_ca_system_score_codex":0.0002149502,"about_ca_system_score_gemma":0.0047975513,"threshold_uncertainty_score":0.9928015},"labels":[],"label_agreement":null},{"id":"W3017284598","doi":"10.1503/cmaj.191364","title":"Mucormycosis in a 40-year-old woman with diabetic ketoacidosis","year":2020,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Diabetic ketoacidosis; Medicine; Diabetes mellitus; Indigenous; Insulin; Chest pain; Edema; Mucormycosis; Pediatrics; Surgery; Internal medicine; Endocrinology","score_opus":0.00896121803523282,"score_gpt":0.22399653508212083,"score_spread":0.21503531704688802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3017284598","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9116223,0.00014695025,0.000047631158,0.085152954,0.00008477803,0.00013308185,0.0000106572925,0.00001685941,0.002784772],"genre_scores_gemma":[0.9674088,0.00011390219,0.00011877479,0.031506807,0.00052869285,0.000005151807,0.0000060846946,0.000015670144,0.0002961358],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997593,0.00010871665,0.00038735836,0.00020217603,0.0012065016,0.000502232],"domain_scores_gemma":[0.9969496,0.0001019432,0.00011578233,0.00009876332,0.00021970076,0.0025141733],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00083000085,0.00012121074,0.0003298503,0.00012413865,0.00010884904,0.000046695088,0.00012453637,0.00025318755,0.0032352302],"category_scores_gemma":[0.002360086,0.00009785494,0.00008987832,0.00048200067,0.000045109577,0.000095179355,0.000009278641,0.0010625387,0.0001542147],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000089740235,0.00003146024,0.97522634,0.000021840322,0.000053648313,0.0006858791,0.00043531778,8.749531e-7,0.000023217233,0.000033966673,0.019539883,0.0038578333],"study_design_scores_gemma":[0.002011604,0.00025745577,0.9625657,0.00017921526,0.000044925844,0.00006418692,0.0011100257,0.0002230842,0.000027268603,0.000029436833,0.03334633,0.00014076213],"about_ca_topic_score_codex":0.0013626807,"about_ca_topic_score_gemma":0.047090277,"teacher_disagreement_score":0.055786464,"about_ca_system_score_codex":0.0010162506,"about_ca_system_score_gemma":0.0025061122,"threshold_uncertainty_score":0.99767596},"labels":[],"label_agreement":null},{"id":"W3020256411","doi":"10.1128/mbio.03364-19","title":"Tracing the Evolutionary History and Global Expansion of Candida auris Using Population Genomic Analyses","year":2020,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":449,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"Centers for Disease Control and Prevention; U.S. Department of Health and Human Services; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Broad Institute; Canadian Institute for Advanced Research","keywords":"Candida auris; Tracing; Population; Biology; Evolutionary biology; Computational biology; Microbiology; Computer science; Medicine","score_opus":0.08369128218056042,"score_gpt":0.3280982581601647,"score_spread":0.24440697597960426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3020256411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949267,0.0040928787,0.00035640184,0.00027891656,0.000037622995,0.00008944524,0.000007964502,0.000010952216,0.00019911931],"genre_scores_gemma":[0.9992664,0.000024607627,0.0004111012,0.00020214214,0.000059254162,4.326413e-7,0.000009840345,0.0000032418045,0.000022971526],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995362,0.000021143838,0.00014025017,0.00012230138,0.0001116797,0.00006839616],"domain_scores_gemma":[0.9997612,0.000014912529,0.00005246418,0.000096098716,0.00002908207,0.00004621025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006204631,0.000051257208,0.0001316002,0.000011586459,0.0000499716,0.000001967924,0.000023629498,0.000032923705,0.00003992442],"category_scores_gemma":[0.000053511212,0.000036681857,0.000044659853,0.00006978154,0.0000591654,0.000038992115,0.00001583161,0.00004968278,0.000001093056],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023742317,0.00001713197,0.8632124,0.000112916,0.000026064388,0.000006341217,0.0005372051,0.00006536422,0.1336214,0.000040258346,0.00063343084,0.0014900607],"study_design_scores_gemma":[0.00019847827,0.000050002025,0.9944287,0.000034992514,0.00008835786,0.0000054117318,0.00028529583,0.004152282,0.0005091494,0.000041486084,0.0001671125,0.000038766208],"about_ca_topic_score_codex":0.0016298002,"about_ca_topic_score_gemma":0.000094356736,"teacher_disagreement_score":0.13311224,"about_ca_system_score_codex":0.00025369515,"about_ca_system_score_gemma":0.00008227354,"threshold_uncertainty_score":0.24637812},"labels":[],"label_agreement":null},{"id":"W3023554914","doi":"10.1007/s11046-020-00451-y","title":"First Case of Rhinocerebral Mucormycosis Caused by Lichtheimia ornata, with a Review of Lichtheimia Infections","year":2020,"lang":"en","type":"review","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Natural Science Foundation of China","keywords":"Mucormycosis; Zygomycosis; Dermatology; Medicine; Biology; Amphotericin B; Surgery; Antifungal","score_opus":0.03095999027508064,"score_gpt":0.3250769074308259,"score_spread":0.2941169171557453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3023554914","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008774806,0.9943285,0.00009288685,0.00012762475,0.00009014933,0.002114125,0.0009350125,0.00010043951,0.0013337588],"genre_scores_gemma":[0.003346958,0.9950066,0.00043800738,0.00028049244,0.000080774524,0.00016694583,0.00029515283,0.0000958817,0.00028916603],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964318,0.00032080812,0.0015928762,0.00082506955,0.00041065254,0.0004187691],"domain_scores_gemma":[0.9963917,0.00040217483,0.0012527511,0.0012835047,0.0003967052,0.00027316154],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00065903214,0.0007242565,0.004722173,0.00017785352,0.00010898669,0.0000118136,0.00030390036,0.0004886451,0.00051813235],"category_scores_gemma":[0.0011696091,0.0004772607,0.0009458425,0.0012144073,0.00037942672,0.00008806624,0.00014629467,0.0009274458,0.00007658192],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015454102,0.0009937851,0.0050045387,0.7670132,0.0009671371,0.008027314,0.00022751372,1.6931806e-7,0.000028608381,0.00013366296,0.024730101,0.19271941],"study_design_scores_gemma":[0.0007559601,0.0021031878,0.00028804006,0.22338545,0.008691955,0.0076912483,0.00006113685,0.0000035715684,0.000036772326,0.000006310623,0.75634104,0.0006353331],"about_ca_topic_score_codex":0.00015384278,"about_ca_topic_score_gemma":0.00015831653,"teacher_disagreement_score":0.73161095,"about_ca_system_score_codex":0.00018925391,"about_ca_system_score_gemma":0.0008350651,"threshold_uncertainty_score":0.9997679},"labels":[],"label_agreement":null},{"id":"W30241777","doi":"10.1007/978-1-59745-204-5_25","title":"Oral Mucosal Cell Response to Candida albicans in Transgenic Mice Expressing HIV-1","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Clinical Research Institute; Université de Montréal","funders":"","keywords":"Candida albicans; Immune system; Genetically modified mouse; Immunology; Transgene; Human immunodeficiency virus (HIV); Biology; Immunity; Immunodeficiency; Phenotype; Virology; Microbiology; Gene","score_opus":0.03606054961950395,"score_gpt":0.40405981263570223,"score_spread":0.3679992630161983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W30241777","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.67148095,0.00041313763,0.32675895,0.0005312878,0.000075061056,0.00024801804,0.0000066821644,0.00001647671,0.00046940148],"genre_scores_gemma":[0.5844353,0.000024180794,0.4142866,0.00080255495,0.00001717735,0.00002195745,0.000007938673,0.000016331858,0.0003879422],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99611026,0.002387154,0.0004096604,0.0005210002,0.00010148718,0.0004704222],"domain_scores_gemma":[0.9989896,0.00038106617,0.00004189696,0.0004002216,0.000039827486,0.00014739708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019265082,0.00018553314,0.00051629654,0.00027794682,0.000042959087,0.0000036633137,0.0001552687,0.00023351655,0.00009276502],"category_scores_gemma":[0.00085638417,0.00017019307,0.000119032666,0.00046349873,0.0001903446,0.000021168637,0.000044213342,0.00037143155,0.000014314562],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002718223,0.00012096882,0.07639299,0.000025215397,0.000008026853,0.00030238277,0.00096816436,0.000018942354,0.91725796,0.00001684578,0.00005380473,0.0021164757],"study_design_scores_gemma":[0.0038938124,0.00078669615,0.21539646,0.000101213394,0.00004014523,0.00007994939,0.0004926168,0.00018909531,0.76940006,0.00041350088,0.0087590385,0.00044741278],"about_ca_topic_score_codex":0.00030013538,"about_ca_topic_score_gemma":0.00028543785,"teacher_disagreement_score":0.1478579,"about_ca_system_score_codex":0.000141714,"about_ca_system_score_gemma":0.0002460332,"threshold_uncertainty_score":0.6940272},"labels":[],"label_agreement":null},{"id":"W3025328549","doi":"10.1371/journal.ppat.1008544","title":"Platelets are critical for survival and tissue integrity during murine pulmonary Aspergillus fumigatus infection","year":2020,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Cancer Institute; National Heart, Lung, and Blood Institute; York University; Memorial Sloan-Kettering Cancer Center","keywords":"Syk; Aspergillus fumigatus; Immunology; Platelet; Biology; Immune system; Innate immune system; Neutropenia; Microbiology; Hemostasis; Medicine; Tyrosine kinase; Signal transduction; Cell biology; Internal medicine","score_opus":0.056530777592844056,"score_gpt":0.30758941035821025,"score_spread":0.2510586327653662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3025328549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956558,0.00031294284,0.0003823729,0.0022748378,0.000113930575,0.00044920354,0.00012689264,0.00012225744,0.000561779],"genre_scores_gemma":[0.9985266,0.00013112463,0.00048721005,0.00019402758,0.00045871382,0.00002719293,0.000036361977,0.000028251994,0.0001105314],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99875665,0.000047063673,0.00024159375,0.0004382996,0.00021597951,0.0003004418],"domain_scores_gemma":[0.99914294,0.00014980207,0.000039475774,0.00018234659,0.00016449984,0.00032090518],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012139422,0.00017397835,0.00039057565,0.000035326582,0.00015091179,0.000018405352,0.000038710306,0.00014801351,0.000090837246],"category_scores_gemma":[0.0015327925,0.0001563673,0.00009009676,0.00011686229,0.000107747124,0.00008949788,0.00005752298,0.00033471186,0.000022098837],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010695419,0.0003135565,0.49448845,0.0018457776,0.000057081612,0.00056700374,0.00020760437,6.9627293e-7,0.49948016,0.00023788043,0.000052686133,0.001679575],"study_design_scores_gemma":[0.0008465299,0.0004468254,0.94100696,0.00017027368,0.00016545881,0.00006788293,0.00026829628,0.0007088518,0.055317875,0.00014220462,0.0006354213,0.00022339681],"about_ca_topic_score_codex":0.000015876314,"about_ca_topic_score_gemma":0.00003934245,"teacher_disagreement_score":0.44651854,"about_ca_system_score_codex":0.00005245098,"about_ca_system_score_gemma":0.000039304887,"threshold_uncertainty_score":0.63764733},"labels":[],"label_agreement":null},{"id":"W3025501143","doi":"10.1038/s41467-020-16144-5","title":"Structural and biochemical characterization of the exopolysaccharide deacetylase Agd3 required for Aspergillus fumigatus biofilm formation","year":2020,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta; McGill University; McGill University Health Centre; Institute of Infection and Immunity; Hospital for Sick Children; SickKids Foundation; University of Toronto","funders":"National Institute of General Medical Sciences; Fonds de Recherche du Québec - Santé; Hospital for Sick Children; University of Toronto; Natural Sciences and Engineering Research Council of Canada; Cystic Fibrosis Canada; Canadian Institutes of Health Research; McGill University; McGill University Health Centre; Canada Research Chairs; Biological and Environmental Research; Government of Ontario; Government of Canada; U.S. Department of Energy","keywords":"Virulence; Aspergillus fumigatus; Biofilm; Microbiology; Virulence factor; Operon; Biology; Gene; Human pathogen; Biochemistry; Chemistry; Bacteria; Genetics; Escherichia coli","score_opus":0.035055124569640106,"score_gpt":0.301719286766587,"score_spread":0.2666641621969469,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3025501143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9810501,0.0011705634,0.00022297665,0.016687505,0.000046429603,0.0005648202,0.00012631174,0.0000291291,0.00010218921],"genre_scores_gemma":[0.9967781,0.00024896907,0.0014991598,0.0010589551,0.000043970686,0.000019368099,0.0003168138,0.000009024714,0.00002565928],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993584,0.000044440403,0.00024411052,0.00012887912,0.00012562309,0.00009851726],"domain_scores_gemma":[0.9988233,0.00008846507,0.00013303773,0.000685782,0.0001966644,0.00007276593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008797398,0.0000853162,0.00016246602,0.000022260365,0.00017448088,0.00001145037,0.00026070836,0.00017983081,0.000006440244],"category_scores_gemma":[0.00058831484,0.000060444345,0.00008472636,0.00021182728,0.00018808682,0.00012431953,0.00013467664,0.00033501186,8.247038e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014916442,0.000021700556,0.0059523876,0.0001029682,0.000018607581,7.569991e-8,0.00043226685,9.3810335e-8,0.98904026,0.0031532114,0.00030119816,0.0008280599],"study_design_scores_gemma":[0.0016130715,0.0001617833,0.4350205,0.00015020308,0.00022585377,0.000014182818,0.00043594078,0.008740648,0.5482926,0.00029623447,0.004844589,0.00020439686],"about_ca_topic_score_codex":0.0000034796556,"about_ca_topic_score_gemma":0.000019594654,"teacher_disagreement_score":0.44074768,"about_ca_system_score_codex":0.00003229729,"about_ca_system_score_gemma":0.000057431535,"threshold_uncertainty_score":0.24648489},"labels":[],"label_agreement":null},{"id":"W3025731814","doi":"10.1128/mbio.00365-20","title":"Mutations in <i>TAC1B</i> : a Novel Genetic Determinant of Clinical Fluconazole Resistance in Candida auris","year":2020,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":197,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention; National Institutes of Health; Broad Institute; Canadian Institute for Advanced Research","keywords":"Candida auris; Fluconazole; Biology; Fungal pathogen; Multiple drug resistance; Drug resistance; Microbiology; Pathogen; Genetics; Antifungal","score_opus":0.058203482627387934,"score_gpt":0.35597182151160994,"score_spread":0.297768338884222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3025731814","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996463,0.00042315185,0.00026491913,0.0011850204,0.000044765125,0.00024774444,0.000027809781,0.000010721792,0.0013328644],"genre_scores_gemma":[0.99675536,0.000058577505,0.0021846376,0.0006414623,0.0000462007,0.000009774554,0.000008048799,0.000009197623,0.00028673979],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986395,0.000042105632,0.0006852685,0.00028143122,0.00016894669,0.00018272025],"domain_scores_gemma":[0.99940306,0.0001237255,0.000091821545,0.00021490594,0.000049523394,0.00011694132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023679569,0.00008867807,0.00040522005,0.000044528868,0.00001586776,0.0000038135993,0.00008122247,0.00008814324,0.00006571651],"category_scores_gemma":[0.00054424076,0.000081733786,0.0000909371,0.00030544144,0.00011574195,0.000033482385,0.000026726791,0.00021384378,0.000013840514],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005813799,0.00027766766,0.98653865,0.0001763699,0.0000076156157,0.00012974034,0.00082924403,0.00000422893,0.008875198,0.00004180147,0.0002895059,0.0022485752],"study_design_scores_gemma":[0.0020790442,0.0001359136,0.9932431,0.0001433689,0.000018746736,0.000001387504,0.00019290982,0.00038247896,0.0018590578,0.00005908025,0.0018057443,0.000079189005],"about_ca_topic_score_codex":0.00033970192,"about_ca_topic_score_gemma":0.009653739,"teacher_disagreement_score":0.009314037,"about_ca_system_score_codex":0.000038693714,"about_ca_system_score_gemma":0.00025905712,"threshold_uncertainty_score":0.5387013},"labels":[],"label_agreement":null},{"id":"W3026958586","doi":"10.1021/acs.chemrev.0c00199","title":"Antifungal Drug Resistance: Molecular Mechanisms in <i>Candida albicans</i> and Beyond","year":2020,"lang":"en","type":"review","venue":"Chemical Reviews","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":774,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Chemistry; Candida albicans; Antifungal; Antifungal drug; Drug resistance; Drug; Microbiology; Computational biology; Pharmacology","score_opus":0.02491011252050278,"score_gpt":0.3239073919797439,"score_spread":0.2989972794592411,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3026958586","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003123241,0.9909617,0.00011596956,0.00035843288,0.00008043789,0.0023019204,0.000042029777,0.000046218243,0.006062098],"genre_scores_gemma":[0.000053492873,0.9946412,0.0020783634,0.0010741636,0.00011476758,0.0002053109,0.00019091376,0.00009089205,0.0015509385],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99589175,0.0002338268,0.0016070468,0.0012654623,0.00045451554,0.00054738985],"domain_scores_gemma":[0.99794614,0.00019764257,0.00041323056,0.0008587272,0.0000533266,0.00053093984],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007860667,0.00077432074,0.0052753305,0.00010641818,0.00003982107,0.000038541,0.00031961183,0.00045909814,0.00021929192],"category_scores_gemma":[0.0010944109,0.00057667145,0.0009454421,0.0007411593,0.00021022446,0.00006268114,0.0001846077,0.0013012881,0.000139708],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008294153,0.00017331063,0.000014207982,0.10252476,0.000097748656,0.00068816025,0.00006085747,1.0799027e-9,0.002023407,0.0013646944,0.01641252,0.8765574],"study_design_scores_gemma":[0.0003840584,0.000021387958,0.0000018487921,0.027454386,0.0008667602,0.000035957713,0.000009847211,4.4759244e-7,0.0002991305,0.0005530135,0.9699089,0.00046427172],"about_ca_topic_score_codex":0.000004166275,"about_ca_topic_score_gemma":0.000013584322,"teacher_disagreement_score":0.9534964,"about_ca_system_score_codex":0.00026936247,"about_ca_system_score_gemma":0.00039861278,"threshold_uncertainty_score":0.9996685},"labels":[],"label_agreement":null},{"id":"W3027703925","doi":"10.1093/cid/ciaa603","title":"Invasive Fungal Infections in Lung Transplant Recipients","year":2020,"lang":"en","type":"letter","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Medicine; Lung; Lung transplantation; Mycosis; Intensive care medicine; Internal medicine; Immunology","score_opus":0.046249817081763,"score_gpt":0.35610047391433364,"score_spread":0.3098506568325706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3027703925","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6708563,0.002099796,0.00014186779,0.31155136,0.0040496453,0.0027599486,0.0013144733,0.00083930354,0.006387307],"genre_scores_gemma":[0.63387114,0.0017147539,0.0000036655529,0.35909867,0.0036688196,0.00009877678,0.00084575027,0.00006764218,0.0006307697],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99588877,0.00050682743,0.0013557135,0.0011346859,0.0005140938,0.000599904],"domain_scores_gemma":[0.9963121,0.0020359457,0.00028512656,0.0006870248,0.00018739843,0.000492447],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00021464685,0.00051533664,0.0014864373,0.00024016977,0.0001435131,0.000053384214,0.00018586458,0.0010521371,0.0005861463],"category_scores_gemma":[0.0034765496,0.00046790828,0.0011177594,0.00052298885,0.00045188327,0.00012283909,0.000074585,0.003979955,0.00035704684],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011640002,0.0006726211,0.59097964,0.000518454,0.00017625853,0.0027728337,0.000022440396,0.0000010414021,0.0000019303532,0.0000037173513,0.40441272,0.00032192122],"study_design_scores_gemma":[0.0024314295,0.0010143821,0.9300509,0.001155231,0.0011321527,0.000037769707,0.000009762421,0.000031649626,0.000003426277,0.00040607396,0.06322065,0.00050655025],"about_ca_topic_score_codex":0.000074514326,"about_ca_topic_score_gemma":0.00037798696,"teacher_disagreement_score":0.34119207,"about_ca_system_score_codex":0.000313554,"about_ca_system_score_gemma":0.0010079738,"threshold_uncertainty_score":0.99977726},"labels":[],"label_agreement":null},{"id":"W3028897740","doi":"10.4103/ijmy.ijmy_46_20","title":"Spectrum of pulmonary fungal pathogens, associated risk factors, and anti-fungal susceptibility pattern among persons with presumptive tuberculosis at Gombe, Nigeria","year":2020,"lang":"en","type":"article","venue":"International Journal of Mycobacteriology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Aspergillus fumigatus; Tuberculosis; Medicine; GeneXpert MTB/RIF; Sputum; Immunology; Biology; Microbiology; Pathology","score_opus":0.012325332436880922,"score_gpt":0.24346370317448277,"score_spread":0.23113837073760185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3028897740","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997369,0.00019640253,0.00015525836,0.000921865,0.00029936281,0.00020961865,0.0007235246,0.000018367668,0.00010659849],"genre_scores_gemma":[0.9989158,0.00042041106,0.000070842296,0.00015830851,0.0002896575,0.000001743948,0.00007913457,0.000025092317,0.0000390099],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99760205,0.00034230488,0.0008029246,0.0004024413,0.000549062,0.00030121402],"domain_scores_gemma":[0.99763364,0.00033264735,0.0009815628,0.00018307347,0.0005687069,0.00030039664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004469354,0.00028607607,0.00087096426,0.00012337802,0.00006745078,0.000022035154,0.0002490923,0.0002162421,0.00040361602],"category_scores_gemma":[0.0007179359,0.00020570074,0.00029901485,0.00011109267,0.00043275117,0.0002161583,0.00014751012,0.00058125134,0.0000040453156],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027292464,0.00028749046,0.9392193,0.000044301436,0.0011297661,0.00053482753,0.0011828522,0.00000649139,0.05441947,0.0000025524664,0.00012470396,0.0003189903],"study_design_scores_gemma":[0.0013658025,0.0013015049,0.9916786,0.00014347759,0.00025086972,0.00033633754,0.00057584315,0.00013128742,0.003970764,0.000016249514,0.000056739187,0.00017252262],"about_ca_topic_score_codex":0.00016000401,"about_ca_topic_score_gemma":0.00046004113,"teacher_disagreement_score":0.052459292,"about_ca_system_score_codex":0.00028080505,"about_ca_system_score_gemma":0.00015247836,"threshold_uncertainty_score":0.83882326},"labels":[],"label_agreement":null},{"id":"W3030494473","doi":"10.1200/jco.20.00158","title":"Clinical Practice Guideline for Systemic Antifungal Prophylaxis in Pediatric Patients With Cancer and Hematopoietic Stem-Cell Transplantation Recipients","year":2020,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":142,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Clinical Evaluative Sciences; Pediatric Oncology Group; SickKids Foundation; University of Toronto; Hospital for Sick Children; Princess Margaret Cancer Centre","funders":"Medical Research Council; University of Exeter; Astellas Pharma; Wellcome Trust; National Institute for Health and Care Research; Gilead Sciences; Pediatric Oncology Group of Ontario; Pfizer","keywords":"Medicine; Posaconazole; Echinocandin; Voriconazole; Guideline; Intensive care medicine; Transplantation; Hematopoietic stem cell transplantation; Itraconazole; Immunosuppression; Cancer; Internal medicine; Antifungal; Fluconazole; Dermatology","score_opus":0.07317244729589775,"score_gpt":0.43790391005571855,"score_spread":0.3647314627598208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3030494473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902615,0.0010806655,0.0018178829,0.0054197796,0.0005006027,0.0007588175,0.000014244015,0.0000068061804,0.00013973101],"genre_scores_gemma":[0.9829339,0.0035531,0.009016693,0.003519962,0.0009036311,0.000008854467,0.0000072213934,0.00001903402,0.000037600425],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99453545,0.0005036295,0.00393542,0.00034676347,0.0004610777,0.00021765412],"domain_scores_gemma":[0.9928747,0.003130949,0.0021922388,0.00012665466,0.0012512741,0.0004241858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004329976,0.00015232505,0.0014366312,0.00007382373,0.000033071738,0.000009471651,0.00011047726,0.0003792354,0.000015635478],"category_scores_gemma":[0.003074086,0.00010101666,0.00024452133,0.00021185086,0.00011713232,0.00021165865,0.00001606646,0.0009179487,0.00000332833],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.028685318,0.0017302735,0.93938607,0.0007140419,0.00007537342,0.00026606547,0.0002382901,0.0000108435415,0.0000156661,0.0000061718038,0.002038483,0.026833424],"study_design_scores_gemma":[0.023843799,0.029545583,0.9381174,0.00028728327,0.0011180122,0.000091161106,0.0003372418,0.00012511184,0.0000118010685,0.000014592262,0.0063546086,0.00015344663],"about_ca_topic_score_codex":0.0000070378696,"about_ca_topic_score_gemma":0.000021704209,"teacher_disagreement_score":0.02781531,"about_ca_system_score_codex":0.000085236185,"about_ca_system_score_gemma":0.0013866278,"threshold_uncertainty_score":0.411934},"labels":[],"label_agreement":null},{"id":"W3032222154","doi":"10.1182/blood.v130.suppl_1.2294.2294","title":"Utility of Computed Tomography for the Diagnosis of Invasive Aspergillosis in Hematological Malignancy","year":2017,"lang":"en","type":"article","venue":"Blood","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Aspergillosis; Computed tomography; Medicine; Hematologic Neoplasms; Malignancy; Hematological malignancy; Hematologic malignancy; Pathogenic organism; Radiology; Pathology; Internal medicine; Cancer; Immunology; Biology","score_opus":0.04858335193690119,"score_gpt":0.30680890834436825,"score_spread":0.258225556407467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3032222154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971192,0.0010608038,0.00007370602,0.0004253,0.00003421224,0.00056552066,0.000043789023,0.000007539688,0.00066994573],"genre_scores_gemma":[0.9991374,0.00018552996,0.00055045367,0.00004267532,0.000016148135,0.000047242047,0.0000039060924,0.000004762759,0.000011862706],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991778,0.000030349387,0.0003131916,0.00018828196,0.00014770214,0.00014265742],"domain_scores_gemma":[0.99842656,0.0005776355,0.0001850479,0.0006255174,0.00014701979,0.000038247177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026736152,0.00008611415,0.00040671203,0.000037760696,0.0000835768,0.000005614436,0.00021176098,0.00008334395,0.00004778279],"category_scores_gemma":[0.0010624224,0.000053170876,0.00022509249,0.00008502465,0.00032631756,0.00003557472,0.000059103502,0.000077518634,6.0902937e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017776334,0.0010934409,0.995832,0.00037667836,0.000090029585,0.000008435004,0.00008369927,1.0228154e-7,0.0009946042,0.00059492525,0.000116404924,0.0006318865],"study_design_scores_gemma":[0.001639207,0.0001826518,0.9006355,0.00024804974,0.00014121734,0.0000020840619,0.00010875306,0.000022018643,0.09648972,0.00046355664,0.00002317099,0.000044088854],"about_ca_topic_score_codex":0.00011545705,"about_ca_topic_score_gemma":0.0003982816,"teacher_disagreement_score":0.09549512,"about_ca_system_score_codex":0.0000026975167,"about_ca_system_score_gemma":0.000049456237,"threshold_uncertainty_score":0.21682455},"labels":[],"label_agreement":null},{"id":"W3033452142","doi":"10.3389/fmicb.2020.00996","title":"FDA Approved Drug Library Screening Identifies Robenidine as a Repositionable Antifungal","year":2020,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Program for Professor of Special Appointment (Eastern Scholar) at Shanghai Institutions of Higher Learning; School of Medicine, Shanghai Jiao Tong University; Shanghai Jiao Tong University; Chinese Academy of Sciences; Shanghai Municipal Education Commission; National Natural Science Foundation of China","keywords":"Candida albicans; Microbiology; Biology; Corpus albicans; Antifungal drug; Fluconazole; Antifungal","score_opus":0.010508992633884901,"score_gpt":0.2283656648416058,"score_spread":0.2178566722077209,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033452142","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97398156,0.0036604344,0.007159072,0.0078093596,0.0005909156,0.00059908064,0.00005960763,0.00019322068,0.005946773],"genre_scores_gemma":[0.9654397,0.00020606552,0.022596745,0.003918247,0.00021634661,0.000015675192,0.00045780427,0.000036247922,0.0071131815],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998307,0.00012873592,0.0004543087,0.0006196302,0.00007524768,0.00041510124],"domain_scores_gemma":[0.99936575,0.00003814958,0.00010617144,0.0002926409,0.000046327612,0.00015094562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001832138,0.0002092575,0.00056506257,0.00012542901,0.00009474319,0.000033153414,0.00019106868,0.00018490257,0.00038216353],"category_scores_gemma":[0.00018957799,0.00019670773,0.00015785678,0.00035921508,0.0002284641,0.00024427232,0.00013303536,0.00041180925,0.00006219641],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014472589,0.00009384593,0.2894519,0.00016777424,0.00008663955,0.00020424754,0.00048421038,0.000009395279,0.4680458,0.00008541281,0.23920338,0.0007201245],"study_design_scores_gemma":[0.009020071,0.0009766141,0.10307899,0.0006945189,0.00031087946,0.0005664122,0.009003382,0.0019419179,0.632015,0.0020845626,0.23884857,0.0014590578],"about_ca_topic_score_codex":0.00004387184,"about_ca_topic_score_gemma":0.000010381199,"teacher_disagreement_score":0.18637292,"about_ca_system_score_codex":0.00004110144,"about_ca_system_score_gemma":0.00013496773,"threshold_uncertainty_score":0.8021508},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W3033828382","doi":"10.1186/s13756-020-00752-3","title":"Prevalence of Candida auris in Canadian acute care hospitals among at-risk patients, 2018","year":2020,"lang":"en","type":"article","venue":"Antimicrobial Resistance and Infection Control","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Mount Sinai Hospital; Public Health Agency of Canada; Université Laval","funders":"Centers for Disease Control and Prevention; Fraser Health Authority; British Columbia Centre for Disease Control; University of Alberta; IWK Health Centre; Jewish General Hospital; Public Health Agency; McGill University; McGill University Health Centre; Public Health Agency of Canada; Hamilton Health Sciences; BC Children's Hospital; McMaster University","keywords":"Candida auris; Medicine; Medical microbiology; Indian subcontinent; Health care; Prevalence; Internal medicine; Emergency medicine; Intensive care medicine; Epidemiology; Antifungal; Dermatology; Virology","score_opus":0.0037004001433798015,"score_gpt":0.215420665462255,"score_spread":0.2117202653188752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033828382","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99648464,0.0007457288,0.000041611882,0.0004805383,0.00010082688,0.0006841808,0.00045449586,0.000022291128,0.0009857053],"genre_scores_gemma":[0.9964976,0.0022403894,0.000028392002,0.0007271421,0.000059952938,0.000011203358,0.00003193122,0.000016301849,0.00038708712],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99860954,0.00005813108,0.00040584107,0.0003986313,0.00016209787,0.00036577164],"domain_scores_gemma":[0.9990113,0.00004287177,0.00018255085,0.00020426749,0.00023547816,0.00032357525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001412544,0.00018071968,0.0004216729,0.00010384166,0.00015148551,0.000017170363,0.000058101185,0.00014445007,0.00008690928],"category_scores_gemma":[0.00027933228,0.00017241425,0.0001160491,0.00023835633,0.00018297815,0.00018182053,0.000020542348,0.00020691712,0.000011143539],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081101817,0.000032547847,0.990562,0.00069152954,0.000057966063,0.000013863418,0.0005343351,0.0000035798628,0.0028692854,0.000010765121,0.004000024,0.00041306936],"study_design_scores_gemma":[0.002839408,0.00028727335,0.99113005,0.00025644188,0.00018296503,6.279862e-7,0.00003212997,0.000026752043,0.0028175872,0.0000029129276,0.0022648294,0.00015900921],"about_ca_topic_score_codex":0.07769149,"about_ca_topic_score_gemma":0.40996176,"teacher_disagreement_score":0.33227026,"about_ca_system_score_codex":0.0002771652,"about_ca_system_score_gemma":0.00026215968,"threshold_uncertainty_score":0.9284502},"labels":[],"label_agreement":null},{"id":"W3035631360","doi":"10.3389/fgene.2020.00554","title":"Understanding the Emergence of Multidrug-Resistant Candida: Using Whole-Genome Sequencing to Describe the Population Structure of Candida haemulonii Species Complex","year":2020,"lang":"en","type":"article","venue":"Frontiers in Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"U.S. Department of Health and Human Services; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; Broad Institute; Canadian Institute for Advanced Research","keywords":"Multiple drug resistance; Biology; Genome; Population structure; Computational biology; Population; Genetics; Whole genome sequencing; Drug resistance; Gene; Medicine","score_opus":0.15220704242650848,"score_gpt":0.2949705832573202,"score_spread":0.1427635408308117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3035631360","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94068855,0.0007874717,0.056708563,0.0008183053,0.000197291,0.0005505887,0.00018016073,0.000007966561,0.00006107672],"genre_scores_gemma":[0.9870602,0.000067226785,0.012497397,0.00022438014,0.000077726,0.0000012296523,0.00003089122,0.000017982744,0.000022953513],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985172,0.000072346964,0.0005045668,0.0002476069,0.00040288654,0.0002553551],"domain_scores_gemma":[0.9992406,0.000039517858,0.00018237854,0.00034609827,0.000096003656,0.00009540821],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017577871,0.00015918151,0.000395649,0.000070970564,0.00014838742,0.000012630119,0.00021511193,0.00006847054,0.000031796204],"category_scores_gemma":[0.00015517806,0.000105859144,0.000085033134,0.00050864584,0.0002399222,0.000032248463,0.00007188683,0.00019007406,2.2396111e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002550129,0.000009760547,0.5288331,0.00015483824,0.000046616584,0.0000047772464,0.00582288,0.01508273,0.44920895,0.000081703925,0.00043154196,0.000068090696],"study_design_scores_gemma":[0.00068437366,0.00021528677,0.90097064,0.00019241223,0.00018361081,0.0000030607403,0.03962218,0.045549024,0.011440764,0.0006172881,0.0002862142,0.00023516474],"about_ca_topic_score_codex":0.000711235,"about_ca_topic_score_gemma":0.0019619043,"teacher_disagreement_score":0.43776816,"about_ca_system_score_codex":0.00036977849,"about_ca_system_score_gemma":0.00015612536,"threshold_uncertainty_score":0.43168107},"labels":[],"label_agreement":null},{"id":"W3036453600","doi":"10.1128/aac.00402-20","title":"Antifungal Susceptibility of Clinical Yeast Isolates from a Large Canadian Reference Laboratory and Application of Whole-Genome Sequence Analysis To Elucidate Mechanisms of Acquired Resistance","year":2020,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; University of Toronto; London Health Sciences Centre; Public Health Ontario","funders":"","keywords":"Caspofungin; Biology; Microbiology; Candida tropicalis; Candida glabrata; Anidulafungin; Echinocandin; Micafungin; Fluconazole; Candida parapsilosis; Corpus albicans; Candida albicans; Antifungal","score_opus":0.03107488119877565,"score_gpt":0.31331712134531736,"score_spread":0.2822422401465417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3036453600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99162847,0.00006272499,0.0032027748,0.0013867696,0.000018129336,0.00036230363,0.0032810117,0.000010717066,0.000047128742],"genre_scores_gemma":[0.9950545,0.00031785714,0.0017931698,0.0025323494,0.000027212256,0.0000021720155,0.0002182306,0.000014122043,0.000040415474],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99829835,0.00007341218,0.00071791647,0.0005393958,0.00015620208,0.00021473372],"domain_scores_gemma":[0.99868387,0.000036079946,0.00029483225,0.00039079945,0.0002851678,0.00030926056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039788344,0.00016643139,0.0008166896,0.000085889376,0.000051733765,0.000009676856,0.0001410368,0.00014945502,0.000102434526],"category_scores_gemma":[0.000073205105,0.00015305886,0.00012381336,0.00055847043,0.00021025851,0.000069428,0.000038494338,0.00008247119,0.000002451047],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074313756,0.00010885495,0.35468167,0.00013934108,0.00026037483,0.0000019704926,0.00040936325,9.559791e-7,0.64294827,0.00006328046,0.00018226886,0.000460551],"study_design_scores_gemma":[0.0012632839,0.00022791683,0.93361956,0.00007376947,0.0002912137,2.1719103e-7,0.00020009816,0.00024883714,0.060967196,0.000067775334,0.0028718845,0.0001682704],"about_ca_topic_score_codex":0.0050745667,"about_ca_topic_score_gemma":0.01700755,"teacher_disagreement_score":0.58198106,"about_ca_system_score_codex":0.000021030615,"about_ca_system_score_gemma":0.00018788362,"threshold_uncertainty_score":0.9490612},"labels":[],"label_agreement":null},{"id":"W3036748165","doi":"10.1101/2020.06.19.160531","title":"High resolution genome-wide occupancy in <i>Candida spp</i> . using ChEC-seq","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Université de Genève","keywords":"Chromatin; Biology; Tiling array; Candida albicans; Genome; Genetics; ChIP-on-chip; Computational biology; Chromatin immunoprecipitation; Gene; Regulator; ChIP-sequencing; Promoter; DNA microarray; Nucleosome; Gene expression","score_opus":0.026375405935720013,"score_gpt":0.25207025078979106,"score_spread":0.22569484485407104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3036748165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99178046,0.0023660285,0.0024638888,0.0007370206,0.00076702115,0.0013001638,0.0002192945,0.00033874356,0.000027372284],"genre_scores_gemma":[0.98867786,0.00047308666,0.008897352,0.0009348746,0.0007765481,0.00006962903,0.000002618274,0.00015576101,0.000012275184],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9955359,0.00023318012,0.0010355272,0.0016392099,0.00068631954,0.0008698652],"domain_scores_gemma":[0.9968341,0.000095332056,0.00046863072,0.0016450585,0.00043635652,0.00052050955],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009192125,0.00072895264,0.0013202451,0.00034176488,0.00017723319,0.00011509748,0.00042374677,0.0008126977,0.00012189044],"category_scores_gemma":[0.0009750866,0.0007858619,0.00031051607,0.0009311247,0.00020215024,0.00016973306,0.00049496995,0.0019999163,0.00013118112],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005582273,0.00024924194,0.4143437,0.0014361087,0.00013890296,0.00051392923,0.000021864977,0.000097837736,0.58214927,0.00016528214,0.00032468885,9.27425e-7],"study_design_scores_gemma":[0.001404842,0.00010197863,0.9458509,0.0011761669,0.00025844746,3.8919172e-8,0.000009570062,0.00066906906,0.04765693,0.000010793763,0.0020455746,0.0008156916],"about_ca_topic_score_codex":0.00046671458,"about_ca_topic_score_gemma":0.000037073893,"teacher_disagreement_score":0.5344924,"about_ca_system_score_codex":0.0013181855,"about_ca_system_score_gemma":0.0017693867,"threshold_uncertainty_score":0.9994592},"labels":[],"label_agreement":null},{"id":"W3037288517","doi":"10.1016/j.mib.2020.05.007","title":"I want to break free – macrophage strategies to recognize and kill Candida albicans, and fungal counter-strategies to escape","year":2020,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Horizon 2020 Framework Programme; European Society of Clinical Microbiology and Infectious Diseases; Deutsche Forschungsgemeinschaft; Hospital for Sick Children; Alexander von Humboldt-Stiftung","keywords":"Candida albicans; Biology; Macrophage; Corpus albicans; Microbiology; Immune system; Innate immune system; Immunology; Immunity; Yeast; In vitro; Genetics","score_opus":0.053049241523357105,"score_gpt":0.38491380239176903,"score_spread":0.33186456086841193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3037288517","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003455315,0.9883498,0.0001804887,0.0009945796,0.002455315,0.0024956684,0.0018127272,0.00005403439,0.00020207536],"genre_scores_gemma":[0.002519545,0.9953451,0.00038970608,0.0002841228,0.00048644142,0.0001774716,0.0006344763,0.000059200145,0.000103902465],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99662673,0.00027893245,0.0009728363,0.0013366124,0.00011525849,0.0006696002],"domain_scores_gemma":[0.9983637,0.00020606413,0.00017081667,0.00058353,0.00012711801,0.0005487687],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00035811285,0.00070238,0.00238832,0.00034350096,0.00008386098,0.00012093927,0.0003524564,0.00042405803,0.00014372032],"category_scores_gemma":[0.00023576141,0.00056503474,0.00018858131,0.0004892761,0.00020965922,0.00008956355,0.00048221488,0.0007838486,0.0001235953],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007264481,0.00020766868,0.0010551172,0.040365383,0.0002227412,0.0000908112,0.0016606273,7.615419e-7,0.0010912331,0.0004316565,0.049283918,0.90486366],"study_design_scores_gemma":[0.0006439121,0.0007774272,0.00082891306,0.012407583,0.00014136249,0.00023431273,0.00078388123,6.097531e-7,0.0000056343215,0.000051586117,0.98358804,0.0005367541],"about_ca_topic_score_codex":0.00015557041,"about_ca_topic_score_gemma":0.0005926421,"teacher_disagreement_score":0.9343041,"about_ca_system_score_codex":0.00023506359,"about_ca_system_score_gemma":0.0008964083,"threshold_uncertainty_score":0.9996801},"labels":[],"label_agreement":null},{"id":"W3037712042","doi":"10.1186/s13223-020-00454-w","title":"Differential response to biologics in a patient with severe asthma and ABPA: a role for dupilumab?","year":2020,"lang":"en","type":"article","venue":"Allergy Asthma and Clinical Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Dupilumab; Omalizumab; Allergic bronchopulmonary aspergillosis; Medicine; Asthma; Immunoglobulin E; Immunology; Cystic fibrosis; Antibody; Internal medicine","score_opus":0.020623631887419624,"score_gpt":0.29801419785603583,"score_spread":0.2773905659686162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3037712042","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916085,0.00063174084,0.00040902596,0.006646839,0.00006421471,0.0004890904,0.000015352207,0.000028286984,0.00010696655],"genre_scores_gemma":[0.99632853,0.00041051462,0.0007398746,0.0022624324,0.000057123834,0.000038887203,0.000016745611,0.000014642369,0.00013126881],"study_design_codex":"randomized_trial","study_design_gemma":"observational","domain_scores_codex":[0.9983029,0.0002340953,0.0004945747,0.000564259,0.00008313137,0.00032104322],"domain_scores_gemma":[0.99879783,0.0006222394,0.00008143673,0.00020933418,0.00008089378,0.00020827248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022750006,0.00018193272,0.00058446894,0.000045194745,0.00006800941,0.000011960476,0.00007487227,0.00028098378,0.00008517281],"category_scores_gemma":[0.0009006944,0.00013094464,0.00008763113,0.00011605387,0.00029525592,0.000035866342,0.00013453301,0.00033131865,0.000009426224],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.4620164,0.0020252462,0.26203915,0.000121364676,0.0013423767,0.0005816122,0.0035221446,0.000007150395,0.039493125,0.0015929848,0.0008511115,0.22640733],"study_design_scores_gemma":[0.0058829035,0.020861048,0.940291,0.00006627521,0.000019174671,0.00008211407,0.0013674903,0.0001998884,0.0001358201,0.00015695348,0.030719,0.00021832291],"about_ca_topic_score_codex":0.000033936303,"about_ca_topic_score_gemma":0.0003867382,"teacher_disagreement_score":0.67825186,"about_ca_system_score_codex":0.000018850244,"about_ca_system_score_gemma":0.00009037765,"threshold_uncertainty_score":0.53397673},"labels":[],"label_agreement":null},{"id":"W3042350762","doi":"10.1128/aac.01450-20","title":"Safety, Tolerability, and Pharmacokinetics of a Novel Oral Amphotericin B Formulation (iCo-019) following Single-Dose Administration to Healthy Human Subjects: an Alternative Approach to Parenteral Amphotericin B Administration","year":2020,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of British Columbia; iCo Therapeutics (Canada)","funders":"","keywords":"Tolerability; Pharmacokinetics; Amphotericin B; Pharmacology; Medicine; Oral administration; Toxicity; Adverse effect; Internal medicine; Antifungal","score_opus":0.07575954511087801,"score_gpt":0.35189943280163566,"score_spread":0.27613988769075765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042350762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98688126,0.0000068032036,0.008619356,0.0031321766,0.000067232235,0.0011097394,0.00006500328,0.000033563258,0.00008486926],"genre_scores_gemma":[0.98273844,0.000033385317,0.004610892,0.0122157205,0.00013148104,0.000008042334,0.00021387775,0.000030642026,0.000017513648],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982641,0.00005364229,0.0005975262,0.0005741882,0.00024402651,0.00026652575],"domain_scores_gemma":[0.99918216,0.00001845457,0.00015997596,0.00018798701,0.00010401207,0.00034740253],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019282017,0.0002614745,0.00051404303,0.00007114892,0.00013458505,0.00007067281,0.000091213056,0.00008575426,0.000016489723],"category_scores_gemma":[0.000026689053,0.00024715826,0.00009195944,0.00022955796,0.000052506388,0.00020132915,0.00004058808,0.0001152347,7.586237e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0087982705,0.0022353574,0.10418979,0.00037227056,0.00010025395,0.000007878485,0.0064165136,0.000027230237,0.8720296,0.000039389975,0.00034174466,0.00544168],"study_design_scores_gemma":[0.014348654,0.014113762,0.75826365,0.00033425825,0.00019496027,0.000041008792,0.00089766865,0.006127369,0.20310096,0.000029094,0.0017651994,0.0007833981],"about_ca_topic_score_codex":0.00012346025,"about_ca_topic_score_gemma":0.000081061364,"teacher_disagreement_score":0.6689287,"about_ca_system_score_codex":0.00006342449,"about_ca_system_score_gemma":0.00007726844,"threshold_uncertainty_score":0.9999981},"labels":[],"label_agreement":null},{"id":"W3042767997","doi":"10.1128/aac.00899-20","title":"Antifungal Activity of Gepinacin Scaffold Glycosylphosphatidylinositol Anchor Biosynthesis Inhibitors with Improved Metabolic Stability","year":2020,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Glycomics Network; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Potency; Biosynthesis; Antifungal; Pharmacokinetics; In vitro; Metabolic stability; Biochemistry; Solubility; Pharmacology; Chemistry; Toxicity; Biological activity; Biology; Microbiology; Enzyme","score_opus":0.018604001252299628,"score_gpt":0.2439260366667461,"score_spread":0.22532203541444645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042767997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940569,0.00013487713,0.00021025474,0.0045710457,0.000052356125,0.0007063463,0.000076265496,0.000060037226,0.00013193664],"genre_scores_gemma":[0.9948129,0.00081072544,0.0007084273,0.003438601,0.00013325542,0.0000048758184,0.000010595723,0.00004061261,0.00004002417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983434,0.000052726733,0.00037864238,0.000623759,0.000246651,0.0003547988],"domain_scores_gemma":[0.9989676,0.000056570476,0.00020859916,0.0003532058,0.00015123545,0.0002628153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016908355,0.00032445078,0.0008079505,0.000046456393,0.000113012786,0.000031363645,0.00011665184,0.0001514165,0.00024015349],"category_scores_gemma":[0.000058654594,0.00024406059,0.00019326515,0.00033302334,0.00030720842,0.0001794959,0.00004260442,0.00018792092,0.0000038600815],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035129865,0.00045918545,0.3858599,0.00033232616,0.00019092494,0.000008230835,0.00036188954,1.9653619e-7,0.5992408,0.000009740895,0.001039885,0.008983948],"study_design_scores_gemma":[0.0017922597,0.00039214222,0.3647169,0.00007947409,0.0001027811,0.000004147602,0.00006876649,0.000118834294,0.6312164,0.0000015147884,0.0013286673,0.0001780937],"about_ca_topic_score_codex":0.0001362378,"about_ca_topic_score_gemma":0.0000265465,"teacher_disagreement_score":0.03197564,"about_ca_system_score_codex":0.000025075788,"about_ca_system_score_gemma":0.00012601612,"threshold_uncertainty_score":0.9952502},"labels":[],"label_agreement":null},{"id":"W3044228167","doi":"10.1183/13993003.02554-2020","title":"Confronting and mitigating the risk of COVID-19 associated pulmonary aspergillosis","year":2020,"lang":"en","type":"editorial","venue":"European Respiratory Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Environment Research Council; Canadian Institute for Advanced Research; Medical Research Council; Wellcome Trust; Sight Research UK; Cystic Fibrosis Trust","keywords":"Pulmonary aspergillosis; Medicine; Coronavirus disease 2019 (COVID-19); Aspergillosis; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Lung disease; 2019-20 coronavirus outbreak; Lung; Pulmonary disease; Intensive care medicine; Disease; Immunology; Infectious disease (medical specialty); Virology; Internal medicine; Outbreak","score_opus":0.026815315361250973,"score_gpt":0.29098581481894453,"score_spread":0.26417049945769355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3044228167","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4236209,0.045438223,0.00030945704,0.002532985,0.49050143,0.0014941101,0.0012629031,0.0002946062,0.03454536],"genre_scores_gemma":[0.33923644,0.0020572257,0.00017840491,0.0020110833,0.6550489,0.0000029723158,0.000074783085,0.00022206777,0.0011680885],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99422425,0.0026494348,0.0010984928,0.00047701536,0.0011877322,0.00036307937],"domain_scores_gemma":[0.9951222,0.0016106272,0.0016877115,0.0004085847,0.00053281884,0.00063808414],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0059723044,0.00036544545,0.0008165973,0.00010125357,0.00071926386,0.00011564133,0.00035833972,0.00028216673,0.00011334653],"category_scores_gemma":[0.036487125,0.0002487661,0.00039962554,0.00020554135,0.00043035988,0.00008758888,0.00019247156,0.0035331098,0.000017880084],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003775446,0.00006711819,0.112754054,0.0003744008,0.00052328117,0.0013216551,0.00065083895,0.0000037188424,0.0015784804,0.00000427906,0.87957287,0.0027717475],"study_design_scores_gemma":[0.001298249,0.0004516323,0.06504788,0.0007132375,0.0007691622,0.000041675296,0.00097330095,0.000026184263,0.000040282564,0.000028771796,0.93033105,0.00027854962],"about_ca_topic_score_codex":0.000019992385,"about_ca_topic_score_gemma":0.000015927902,"teacher_disagreement_score":0.16454749,"about_ca_system_score_codex":0.00023060157,"about_ca_system_score_gemma":0.0012433919,"threshold_uncertainty_score":0.9999965},"labels":[],"label_agreement":null},{"id":"W3048149014","doi":"10.1177/1060028020948174","title":"Effect of Therapeutic Drug Monitoring and Cytochrome P450 2C19 Genotyping on Clinical Outcomes of Voriconazole: A Systematic Review","year":2020,"lang":"en","type":"review","venue":"Annals of Pharmacotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Voriconazole; Medicine; Therapeutic drug monitoring; CYP2C19; Dosing; Internal medicine; Pharmacology; Randomized controlled trial; Pharmacogenetics; Intensive care medicine; Pharmacokinetics; Genotype; Cytochrome P450; Biology","score_opus":0.1620748648944884,"score_gpt":0.5290984439273729,"score_spread":0.3670235790328845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3048149014","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0039390572,0.99159485,0.0000062645113,0.0001483095,0.00012767848,0.0040617874,0.000048572267,0.00002476622,0.00004873323],"genre_scores_gemma":[0.016030483,0.9830002,0.000020790621,0.00055231724,0.00014029903,0.000096254575,0.000007973976,0.00007074499,0.000080900056],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9944413,0.0014562513,0.0027200289,0.00050753215,0.0006006169,0.00027432764],"domain_scores_gemma":[0.9943285,0.002721331,0.0018924044,0.0006438125,0.00022401678,0.00018992294],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0032879277,0.00057515025,0.009057115,0.00015466474,0.000029932353,0.000006239225,0.00030997794,0.00018778282,0.00005075382],"category_scores_gemma":[0.0005061309,0.00035836035,0.00189248,0.00036967272,0.0001801121,0.00005366362,0.000040064686,0.0005450953,0.000009456784],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026508633,0.00016079369,0.0014949956,0.802133,0.0026314396,0.000011705176,0.000050575774,2.6832428e-8,0.0005816495,0.000009770126,0.000083095656,0.19257782],"study_design_scores_gemma":[0.001575192,0.0024139746,0.0014149992,0.96833026,0.010179455,0.00001269681,0.000012612615,0.0000029358514,0.003670906,0.000009139105,0.011965153,0.00041269072],"about_ca_topic_score_codex":0.000009594838,"about_ca_topic_score_gemma":1.9865982e-7,"teacher_disagreement_score":0.19216514,"about_ca_system_score_codex":0.000026915026,"about_ca_system_score_gemma":0.00020509011,"threshold_uncertainty_score":0.9998868},"labels":[],"label_agreement":null},{"id":"W3048806317","doi":"10.1139/cjm-2019-0491","title":"<i>Lactobacillus rhamnosus</i> cell-free extract targets virulence and antifungal drug resistance in <i>Candida albicans</i>","year":2020,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Research Foundation","keywords":"Lactobacillus rhamnosus; Microbiology; Candida albicans; Biology; Probiotic; Virulence; Corpus albicans; Efflux; Drug resistance; Multiple drug resistance; Bacteria; Biochemistry; Gene","score_opus":0.00980179826069275,"score_gpt":0.21283552166479985,"score_spread":0.2030337234041071,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3048806317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9691286,0.017043898,0.000095708885,0.010726164,0.00024321211,0.00020326032,0.00016558076,0.000007312017,0.002386275],"genre_scores_gemma":[0.9934157,0.00044797515,0.0009283905,0.0044597113,0.00014359804,0.0000010293982,0.000011838815,0.00001984303,0.0005719042],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982646,0.00013554822,0.00063082285,0.00034091942,0.00008556271,0.000542536],"domain_scores_gemma":[0.99822044,0.00012265089,0.00024915955,0.00027052243,0.00017874148,0.00095849915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043111402,0.00021833455,0.000630704,0.0001695972,0.000092253424,0.000023170905,0.00031228922,0.00016653682,0.0002818917],"category_scores_gemma":[0.00046385947,0.00019454901,0.00012622659,0.00025286875,0.00041946955,0.00012420774,0.00002929187,0.00069253385,0.000012643891],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012687327,0.000066542045,0.32592237,0.00029874453,0.00006103986,0.0038664343,0.0019624897,0.0000031621728,0.5601602,0.000096834054,0.10564969,0.00064376136],"study_design_scores_gemma":[0.0121718375,0.0012340856,0.23773946,0.0009985837,0.00025788267,0.0019238549,0.0021038002,0.000015642212,0.057656687,0.0006391423,0.6840939,0.0011651334],"about_ca_topic_score_codex":0.0009583189,"about_ca_topic_score_gemma":0.077417895,"teacher_disagreement_score":0.5784442,"about_ca_system_score_codex":0.00018482647,"about_ca_system_score_gemma":0.0016505368,"threshold_uncertainty_score":0.9394168},"labels":[],"label_agreement":null},{"id":"W3049399022","doi":"10.1074/jbc.rev120.013731","title":"Structure-guided approaches to targeting stress responses in human fungal pathogens","year":2020,"lang":"en","type":"review","venue":"Journal of Biological Chemistry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Biology; Computational biology; Stress (linguistics)","score_opus":0.23470045955758798,"score_gpt":0.36923518906947767,"score_spread":0.1345347295118897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3049399022","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11643243,0.88251764,0.000010929704,0.000171102,0.000053857162,0.00031525927,0.00017676392,0.000015974942,0.0003060459],"genre_scores_gemma":[0.12885721,0.86831504,0.00106074,0.000098576704,0.0012741352,0.000007724374,0.00012466846,0.000036747864,0.00022517043],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969938,0.00023957515,0.0015716875,0.00047155668,0.00036214918,0.00036127315],"domain_scores_gemma":[0.9981696,0.00027956683,0.00075652555,0.00026780067,0.000107765816,0.00041876073],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006885591,0.00043535393,0.0026557501,0.00007941271,0.000055796074,0.000027223437,0.0003758042,0.0007218435,0.0002577584],"category_scores_gemma":[0.0025236604,0.00026153756,0.0008130122,0.0003379382,0.000116879215,0.000029108582,0.00013696887,0.0016012659,0.000003906437],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038041528,0.0016739476,0.06259248,0.09838846,0.0014427382,0.017614074,0.00046013633,0.000010269594,0.19294903,0.00004031193,0.005567871,0.6154565],"study_design_scores_gemma":[0.0018004937,0.0015537116,0.006254367,0.033324912,0.0013618045,0.0024069583,0.0008320041,0.000003225144,0.019696534,0.00018734817,0.93103683,0.0015417982],"about_ca_topic_score_codex":0.0000011741914,"about_ca_topic_score_gemma":0.0000010695699,"teacher_disagreement_score":0.925469,"about_ca_system_score_codex":0.00028378912,"about_ca_system_score_gemma":0.000431082,"threshold_uncertainty_score":0.99998367},"labels":[],"label_agreement":null},{"id":"W3059317685","doi":"10.1016/j.oooo.2020.08.011","title":"Fungal infections in dentistry: Clinical presentations, diagnosis, and treatment alternatives","year":2020,"lang":"en","type":"review","venue":"Oral Surgery Oral Medicine Oral Pathology and Oral Radiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dentistry; Medicine; Intensive care medicine; Dermatology","score_opus":0.1719971282601026,"score_gpt":0.4551084641544287,"score_spread":0.2831113358943261,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3059317685","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10612501,0.88878983,0.000041272095,0.002018011,0.0013674382,0.001365193,0.000110909416,0.00009190361,0.000090434936],"genre_scores_gemma":[0.03836977,0.9587482,0.00025228562,0.0006066195,0.0006563582,0.0003334903,0.00061430875,0.00006476579,0.00035420505],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9926259,0.0028153004,0.00202419,0.0015112445,0.0002347427,0.0007886375],"domain_scores_gemma":[0.9950825,0.0031297205,0.0005655892,0.00048201694,0.00009704236,0.0006431499],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016589148,0.00090886204,0.0065972297,0.0005588941,0.00019935519,0.000023273305,0.00015286155,0.0011213075,0.00029216742],"category_scores_gemma":[0.0026498565,0.0006327939,0.00059794314,0.00063597475,0.0024928944,0.00017770356,0.00015898436,0.001304545,0.000045794062],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002199869,0.00029589454,0.5028054,0.00086588145,0.00022818816,0.0050716847,0.000055954097,6.544568e-8,7.976195e-7,0.00009594682,0.0036470757,0.48671308],"study_design_scores_gemma":[0.002300404,0.0032618744,0.20614225,0.002239967,0.0021094112,0.006908792,0.0001252291,0.000010803224,8.178646e-7,0.00022601378,0.7760884,0.0005860335],"about_ca_topic_score_codex":0.0004329111,"about_ca_topic_score_gemma":0.0013640301,"teacher_disagreement_score":0.7724413,"about_ca_system_score_codex":0.00017811851,"about_ca_system_score_gemma":0.0004952546,"threshold_uncertainty_score":0.99961233},"labels":[],"label_agreement":null},{"id":"W3081163854","doi":"10.1016/j.mib.2020.07.011","title":"It’s all in your head: antifungal immunity in the brain","year":2020,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Medical Research Council Canada; Division of Intramural Research, National Institute of Allergy and Infectious Diseases","keywords":"Biology; Aspergillus fumigatus; Candida albicans; Cryptococcus neoformans; Immune system; Central nervous system; Immunity; Immunology; Antifungal; Aspergillosis; Parenchyma; Fungus; Microbiology; Neuroscience","score_opus":0.24429191314450455,"score_gpt":0.4703926521333926,"score_spread":0.22610073898888805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081163854","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00073298096,0.9925045,0.0000069092403,0.0025472443,0.0021944318,0.0016636766,0.00016635195,0.000018223278,0.00016572716],"genre_scores_gemma":[0.0008996248,0.99584544,0.000019804633,0.00056589505,0.00031437012,0.000096680385,0.0021909846,0.000030295107,0.00003688032],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9953905,0.0018264262,0.0013392022,0.0007481843,0.00010120217,0.00059453794],"domain_scores_gemma":[0.998307,0.00063318893,0.00026793103,0.0006814482,0.000036798665,0.0000736679],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0015994962,0.00049588515,0.0022393316,0.00038531778,0.00003554345,0.000017201208,0.0006096863,0.0005713089,0.00011606654],"category_scores_gemma":[0.0006226791,0.00033824318,0.00042764327,0.0007848636,0.00023423744,0.000043932007,0.0001954933,0.0027316695,0.00016765895],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003235362,0.002007351,0.023557078,0.058988277,0.00011739858,0.00011906431,0.003012751,5.172121e-7,0.00028145843,0.00034488871,0.08418357,0.8270641],"study_design_scores_gemma":[0.0008653372,0.00014437576,0.0041171955,0.016604954,0.000040013296,0.00010874805,0.00020514958,0.0000017388298,5.934654e-7,0.000021727345,0.97761595,0.00027418864],"about_ca_topic_score_codex":0.00008231118,"about_ca_topic_score_gemma":0.00031114416,"teacher_disagreement_score":0.8934324,"about_ca_system_score_codex":0.00036082338,"about_ca_system_score_gemma":0.0006316814,"threshold_uncertainty_score":0.99990696},"labels":[],"label_agreement":null},{"id":"W3081623395","doi":"10.3390/jof6040216","title":"Diagnosis of Breakthrough Fungal Infections in the Clinical Mycology Laboratory: An ECMM Consensus Statement","year":2020,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Medical Research Council; Da Volterra; Shionogi; Deutsche Forschungsgemeinschaft; Nabriva Therapeutics; Regeneron Pharmaceuticals; Amplyx; Wellcome Trust; Cidara Therapeutics; Astellas Pharma; Mylan; Medpace; Gilead Sciences; Pfizer","keywords":"Medical mycology; Intensive care medicine; Serology; Aspergillosis; Medicine; Antifungal; Biology; Immunology; Dermatology; Microbiology; Antibody","score_opus":0.08417299218077905,"score_gpt":0.4002021127191282,"score_spread":0.31602912053834914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081623395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98869294,0.0011420401,0.000053610886,0.00947675,0.00020280857,0.00019056225,0.00003033592,0.0000055110654,0.0002054592],"genre_scores_gemma":[0.99590003,0.0013060077,0.00046725426,0.0019767657,0.00033081172,0.0000033415133,0.0000018726985,0.0000075599273,0.000006350327],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979133,0.00046919135,0.001021404,0.00013099691,0.00030821507,0.00015687953],"domain_scores_gemma":[0.99809813,0.00075905427,0.00042154486,0.00018583247,0.00037117064,0.0001642679],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016220371,0.00009374021,0.00048193074,0.000058805275,0.000036436904,0.000008794324,0.00011954608,0.00009609273,0.00017950602],"category_scores_gemma":[0.0010582701,0.000060457205,0.00017623423,0.00032561104,0.00015567792,0.00007707334,0.000018823079,0.0005303992,0.000007866599],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082629576,0.0010966418,0.9812794,0.000063946754,0.000099250276,0.0003422264,0.0007572179,0.000012767869,0.00088565063,0.00018361704,0.010994201,0.00345883],"study_design_scores_gemma":[0.0021570348,0.0050901617,0.9704894,0.00008095266,0.00019399163,0.00009815201,0.0023323623,0.00003757125,0.00056950387,0.00011917711,0.0187573,0.00007438447],"about_ca_topic_score_codex":0.000021535208,"about_ca_topic_score_gemma":0.00013501082,"teacher_disagreement_score":0.010789947,"about_ca_system_score_codex":0.000048185775,"about_ca_system_score_gemma":0.0004593948,"threshold_uncertainty_score":0.24653733},"labels":[],"label_agreement":null},{"id":"W3081958521","doi":"10.1002/cpmc.112","title":"A Low‐Cost Tebuconazole‐Based Screening Test for Azole‐Resistant <i>Aspergillus fumigatus</i>","year":2020,"lang":"en","type":"article","venue":"Current Protocols in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Department for International Development; Natural Environment Research Council; Sight Research UK; Canadian Institute for Advanced Research","keywords":"Azole; Aspergillus fumigatus; Biology; Tebuconazole; Protocol (science); Microbiology; Fungicide; Antifungal; Medicine","score_opus":0.07538130282438338,"score_gpt":0.3642770893799687,"score_spread":0.28889578655558534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081958521","genre_codex":"protocol","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26052782,0.0020598161,0.064559214,0.013175886,0.0008007797,0.6521571,0.004461082,0.00087923754,0.00137904],"genre_scores_gemma":[0.9092993,0.000014191268,0.0032858835,0.0033461705,0.0003967477,0.08274642,0.0007842677,0.00006777633,0.000059214894],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974489,0.000104306426,0.0007669944,0.0008364417,0.00010687265,0.00073648605],"domain_scores_gemma":[0.9985702,0.00033864123,0.00019001187,0.00042879648,0.00020283228,0.00026954093],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00041433968,0.00036370973,0.0007667891,0.000103841696,0.000114614275,0.00002749811,0.00029698174,0.00023864824,0.00012412111],"category_scores_gemma":[0.0009985975,0.00031660288,0.00027059455,0.00036488927,0.00028905759,0.00007478041,0.00009922269,0.0005803184,0.000052907533],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0055588773,0.0010860398,0.1368027,0.0027029938,0.000030771535,0.000038334216,0.00015845911,0.000022825312,0.82885003,0.00018575725,0.007150921,0.017412271],"study_design_scores_gemma":[0.021513132,0.0030480016,0.024233323,0.0032408598,0.0001018831,0.000023381519,0.00018992327,0.0015675997,0.25579238,0.00011341696,0.6891308,0.0010453233],"about_ca_topic_score_codex":0.0000044679705,"about_ca_topic_score_gemma":0.000047060486,"teacher_disagreement_score":0.68197984,"about_ca_system_score_codex":0.00013363689,"about_ca_system_score_gemma":0.00042165714,"threshold_uncertainty_score":0.9999286},"labels":[],"label_agreement":null},{"id":"W3082348205","doi":"10.1186/s13223-020-00476-4","title":"Stability of serum precipitins to Aspergillus fumigatus for the diagnosis of allergic bronchopulmonary aspergillosis","year":2020,"lang":"en","type":"article","venue":"Allergy Asthma and Clinical Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Prevention of Organ Failure; University of British Columbia","funders":"","keywords":"Aspergillus fumigatus; Precipitin; Allergic bronchopulmonary aspergillosis; Aspergillus; Aspergillosis; Medicine; Immunology; Immunoglobulin E; Immunodiffusion; Biology; Microbiology; Antibody","score_opus":0.057720620396310755,"score_gpt":0.33250240659992464,"score_spread":0.2747817862036139,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082348205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97909665,0.003951564,0.00024283606,0.015261169,0.00020375692,0.00073934183,0.0001056207,0.000026387317,0.0003727028],"genre_scores_gemma":[0.9921507,0.005293833,0.00040117063,0.0018357808,0.00012530816,0.00007130098,0.000012913521,0.000021804368,0.000087143264],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99759954,0.0002005411,0.0011034267,0.0005609354,0.0001950005,0.0003405704],"domain_scores_gemma":[0.99651766,0.002126676,0.00022751284,0.0005388929,0.0003640691,0.00022521942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005633058,0.00021225373,0.00090616907,0.000029971614,0.00009826708,0.000004822959,0.00026091907,0.0003002682,0.00057382876],"category_scores_gemma":[0.002380728,0.0001481602,0.00046646284,0.00020890095,0.000777288,0.000051217106,0.0002302946,0.0003427961,0.000008698042],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015158068,0.0016575259,0.8249189,0.00036684665,0.0034347742,0.000017124052,0.0014448649,0.000018918496,0.008295746,0.0027174288,0.0015199377,0.14044987],"study_design_scores_gemma":[0.0018048638,0.004701623,0.968266,0.00006143381,0.00010794001,0.0000044940202,0.0012921342,0.00021304983,0.0035258208,0.00012169833,0.019755283,0.00014566023],"about_ca_topic_score_codex":0.00009080631,"about_ca_topic_score_gemma":0.00022939134,"teacher_disagreement_score":0.1433471,"about_ca_system_score_codex":0.000021014961,"about_ca_system_score_gemma":0.0001252101,"threshold_uncertainty_score":0.6283023},"labels":[],"label_agreement":null},{"id":"W3086447589","doi":"","title":"Preparedness for Candida auris in Canadian Nosocomial Infection Surveillance Program (CNISP) Hospitals, 2018.","year":2018,"lang":"en","type":"article","venue":"IDWeek 2018","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Candida auris; Medicine; Preparedness; Medical emergency; Intensive care medicine; Dermatology; Political science; Antifungal","score_opus":0.016160272582971272,"score_gpt":0.3203560893659003,"score_spread":0.30419581678292906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3086447589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991438,0.00010777566,0.000086643326,0.0004751125,0.0009315332,0.0018018144,0.00009751516,0.000097887016,0.004963718],"genre_scores_gemma":[0.9968355,0.000032702614,0.0003967221,0.00020282653,0.00079175713,0.00022164069,0.00008446456,0.000029470093,0.0014049644],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99834454,0.000044477245,0.0003159501,0.00044103892,0.00018801085,0.00066601194],"domain_scores_gemma":[0.998866,0.00005249559,0.00007826692,0.0004200392,0.00023324662,0.0003499081],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004686974,0.00018589916,0.00034643488,0.00013499279,0.00017103973,0.00003786298,0.00009477297,0.00019452276,0.00013638342],"category_scores_gemma":[0.00035305315,0.00017201826,0.00010824354,0.00027961028,0.00024724554,0.00011597295,0.000020606507,0.00013827492,0.00009649341],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044244848,0.00018883155,0.94072056,0.00012395253,0.00003258788,0.000012173984,0.00062348717,4.1452572e-7,0.00037796402,0.00004208597,0.048620697,0.008814824],"study_design_scores_gemma":[0.0011684982,0.001331132,0.8695611,0.00008464743,0.000020316274,0.0000057381903,0.00008259997,0.00019838804,0.00045935178,0.000119641845,0.12674934,0.00021929354],"about_ca_topic_score_codex":0.42507628,"about_ca_topic_score_gemma":0.9400773,"teacher_disagreement_score":0.515001,"about_ca_system_score_codex":0.0006736445,"about_ca_system_score_gemma":0.00090898183,"threshold_uncertainty_score":0.70147014},"labels":[],"label_agreement":null},{"id":"W3087503803","doi":"10.1093/mmy/myaa075","title":"On the lineage of <i>Aspergillus fumigatus</i> isolates in common laboratory use","year":2020,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; Medical Research Council Canada; Wellcome Trust","keywords":"Aspergillus fumigatus; Biology; Documentation; Nomenclature; Microbiology; Genetics; Library science; Computer science; Zoology; Taxonomy (biology); Programming language","score_opus":0.025740067195864608,"score_gpt":0.279775039189854,"score_spread":0.2540349719939894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3087503803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9758462,0.00021117892,0.000032856446,0.022711327,0.00009021414,0.0002178983,0.00001474349,0.000024342113,0.0008512706],"genre_scores_gemma":[0.97248864,0.0001155436,0.000038402024,0.02718454,0.000090259324,0.00000797332,0.000008006134,0.00000980511,0.000056802764],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99869657,0.00022153408,0.00036605712,0.00021609408,0.000285523,0.0002142165],"domain_scores_gemma":[0.99798685,0.0014245899,0.000058596772,0.0002463138,0.00006256058,0.00022110745],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046231932,0.00010292632,0.00042866604,0.00003167479,0.000027653577,0.0000029885564,0.00015044484,0.00022570949,0.0014607966],"category_scores_gemma":[0.004551183,0.00006255008,0.00006404425,0.0003090817,0.00038481047,0.00002603837,0.000059723618,0.0006195765,0.00006109141],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043422715,0.0013342787,0.871248,0.0004027406,0.00011715784,0.0012022657,0.0018114105,0.000008016488,0.04273003,0.018844213,0.055507917,0.0024516745],"study_design_scores_gemma":[0.0056846444,0.005134254,0.8840159,0.00051673956,0.00011437005,0.00001986062,0.00090842514,0.0030602722,0.023637526,0.0008051246,0.0757253,0.00037753838],"about_ca_topic_score_codex":0.00004662417,"about_ca_topic_score_gemma":0.00020073062,"teacher_disagreement_score":0.020217385,"about_ca_system_score_codex":0.00002838144,"about_ca_system_score_gemma":0.0002040979,"threshold_uncertainty_score":0.999452},"labels":[],"label_agreement":null},{"id":"W3087752070","doi":"10.1371/journal.ppat.1008328","title":"Glutamate dehydrogenase (Gdh2)-dependent alkalization is dispensable for escape from macrophages and virulence of Candida albicans","year":2020,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Stockholms Universitet; Hospital for Sick Children; Vetenskapsrådet","keywords":"Biochemistry; Biology; Candida albicans; Glutamate dehydrogenase; Cell biology; Virulence; Amino acid; Chemistry; Microbiology; Glutamate receptor","score_opus":0.03244892627740665,"score_gpt":0.26012262289274735,"score_spread":0.2276736966153407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3087752070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99256086,0.0013840767,0.0019354757,0.0008755978,0.000022214275,0.000532027,0.0025517102,0.00003476024,0.000103246086],"genre_scores_gemma":[0.9971213,0.0005243409,0.0009571134,0.0009663036,0.000059075774,0.000022683298,0.00016096061,0.000026189593,0.00016204047],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988006,0.000022640153,0.00029029467,0.00040822776,0.00026043502,0.00021783239],"domain_scores_gemma":[0.99925286,0.00007669697,0.00010645369,0.00023325048,0.00010987381,0.00022087249],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007351903,0.00015285925,0.00036351848,0.00002037406,0.000072107265,0.000014550943,0.00007424493,0.00007847685,0.0003779251],"category_scores_gemma":[0.00018684311,0.00013540965,0.00008298142,0.00011148526,0.0000843183,0.00006870588,0.000038517814,0.00007077509,0.000013602873],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038852327,0.00012454818,0.09370272,0.00030618763,0.00008584,0.000020310239,0.0010479501,0.0000020961381,0.9030639,0.000020770529,0.00065990235,0.0005772858],"study_design_scores_gemma":[0.0017697522,0.00046303603,0.017412841,0.00014874504,0.00048276767,0.000002609664,0.000663488,0.006211101,0.9716127,0.00019234886,0.00079178106,0.00024882684],"about_ca_topic_score_codex":0.00012464856,"about_ca_topic_score_gemma":0.00007160896,"teacher_disagreement_score":0.07628988,"about_ca_system_score_codex":0.00002812696,"about_ca_system_score_gemma":0.000056956742,"threshold_uncertainty_score":0.5521845},"labels":[],"label_agreement":null},{"id":"W3088120680","doi":"10.1101/2020.09.29.318048","title":"An evolutionarily diverged mitochondrial protein controls biofilm growth and virulence in <i>Candida albicans</i>","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Monash University","keywords":"Candida albicans; Biology; Virulence; Biofilm; Gene; Microbiology; Corpus albicans; Yeast; Genetics; Bacteria","score_opus":0.011997605880666343,"score_gpt":0.23137607132318244,"score_spread":0.2193784654425161,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3088120680","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929333,0.0013336729,0.0010399376,0.0010563817,0.0004453262,0.0024809118,0.0004275875,0.00026534384,0.000017570223],"genre_scores_gemma":[0.9939422,0.0002480504,0.004233919,0.0005121971,0.00063552713,0.0003333688,0.0000017794074,0.00008763876,0.000005319889],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99612474,0.0002647044,0.00073542545,0.001606971,0.0006316829,0.00063645694],"domain_scores_gemma":[0.99750227,0.000070666116,0.00031593684,0.0010782796,0.0003792704,0.00065355416],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00039734048,0.0006200044,0.0010914033,0.00022330099,0.0001520687,0.00013265366,0.0003933226,0.0006597983,0.00005860335],"category_scores_gemma":[0.0008477672,0.00062589545,0.0001695716,0.0005049081,0.00036210963,0.00024436068,0.00029240837,0.0012767232,0.000023541388],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010177344,0.00026262787,0.13204922,0.00068741804,0.000082241895,0.00021418993,0.000017115966,0.0000018697301,0.86492854,0.0006439133,0.00009394636,0.0000011511754],"study_design_scores_gemma":[0.0035807947,0.00044545953,0.8561221,0.0011776533,0.00020805311,5.0026152e-8,0.000011938897,0.00046838453,0.1365577,0.00002842,0.00048805712,0.0009113911],"about_ca_topic_score_codex":0.00050752447,"about_ca_topic_score_gemma":0.000040590177,"teacher_disagreement_score":0.72837085,"about_ca_system_score_codex":0.00030604732,"about_ca_system_score_gemma":0.0012415065,"threshold_uncertainty_score":0.99961925},"labels":[],"label_agreement":null},{"id":"W3088489437","doi":"10.14740/jmc3567","title":"Successful Treatment of Allergic Bronchopulmonary Aspergillosis Using a Combination of Inhaled Fluticasone Furoate/Vilanterol and Oral Voriconazole","year":2020,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Allergic bronchopulmonary aspergillosis; Fluticasone propionate; Asthma; Exacerbation; Sputum culture; Sputum; Fluticasone; Bronchiectasis; Internal medicine; Gastroenterology; Aspergillus fumigatus; Voriconazole; Budesonide; Immunoglobulin E; Lung; Dermatology; Immunology; Pathology; Antibody; Antifungal; Tuberculosis","score_opus":0.05904503522136966,"score_gpt":0.33269540860100216,"score_spread":0.2736503733796325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3088489437","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927391,0.0038831062,0.00016341706,0.0029857105,0.00005949109,0.000116579744,0.000010483345,0.0000043698806,0.000037744925],"genre_scores_gemma":[0.99762183,0.0017592874,0.0002717152,0.00020804616,0.00011631741,5.7242937e-7,0.000003560954,0.00000856893,0.0000100863035],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981021,0.00009474007,0.00068464485,0.00012329471,0.00086787005,0.00012730408],"domain_scores_gemma":[0.99877644,0.00022784276,0.00035016602,0.00009021525,0.00020106435,0.00035429085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029857873,0.0001181069,0.00067096436,0.00007701693,0.000026780837,0.000005232848,0.00007464351,0.00010808604,0.00028038074],"category_scores_gemma":[0.00071363,0.000080591206,0.00016472407,0.00014815103,0.00018862565,0.00008941675,0.000028091541,0.0001466143,5.6124884e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00722511,0.0034610964,0.9227664,0.0010664181,0.00062175386,0.011054517,0.0012206542,0.000012739674,0.031909827,0.00007598755,0.00063485885,0.01995067],"study_design_scores_gemma":[0.036781803,0.03894479,0.8105935,0.0034126826,0.0030429508,0.021304997,0.008084834,0.026078165,0.04956101,0.00019218549,0.0014306946,0.00057242485],"about_ca_topic_score_codex":0.00008736166,"about_ca_topic_score_gemma":0.000011639703,"teacher_disagreement_score":0.112172894,"about_ca_system_score_codex":0.00006380049,"about_ca_system_score_gemma":0.00021379875,"threshold_uncertainty_score":0.32864138},"labels":[],"label_agreement":null},{"id":"W3088807313","doi":"10.1002/cpmc.114","title":"A Simple Nematode Infection Model for Studying <i>Candida albicans</i> Pathogenesis","year":2020,"lang":"en","type":"article","venue":"Current Protocols in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Caenorhabditis elegans; Biology; Candida albicans; Virulence; Corpus albicans; Model organism; Microbiology; Host (biology); Caenorhabditis; Pathogenesis; Nematode; Organism; Genetics; Gene; Immunology; Ecology","score_opus":0.10761994417071,"score_gpt":0.38815239268955937,"score_spread":0.2805324485188494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3088807313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8320747,0.0001980221,0.06527494,0.00042402718,0.00008374176,0.10165387,0.00012544166,0.000105491374,0.00005975011],"genre_scores_gemma":[0.93337697,0.000022879258,0.0006286713,0.00069971767,0.00011928765,0.064976275,0.00012809852,0.0000242672,0.00002386086],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99854213,0.00008184052,0.0004530263,0.0005033455,0.00005199573,0.00036763618],"domain_scores_gemma":[0.9993817,0.00006499093,0.00010989566,0.00022961691,0.0001020557,0.00011170654],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027590757,0.00019056875,0.0004844637,0.000058714042,0.00007609731,0.000012202287,0.00010077987,0.00012933621,0.000040802188],"category_scores_gemma":[0.00021588927,0.00016622548,0.00015173398,0.00020102484,0.00008399497,0.000058625945,0.00006615234,0.00018260513,0.0000131358765],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014968389,0.00048101993,0.50767714,0.0016494723,0.000026342957,0.0000043000923,0.0005696502,0.0002257148,0.4763181,0.00013017851,0.0022178954,0.009203358],"study_design_scores_gemma":[0.052850008,0.009063543,0.2534227,0.0035624204,0.0006191508,0.00011710275,0.0007074814,0.1888015,0.09803178,0.0047195954,0.38454232,0.003562388],"about_ca_topic_score_codex":0.000009664395,"about_ca_topic_score_gemma":0.00009911164,"teacher_disagreement_score":0.38232443,"about_ca_system_score_codex":0.000095606214,"about_ca_system_score_gemma":0.00019950082,"threshold_uncertainty_score":0.67784786},"labels":[],"label_agreement":null},{"id":"W3090336596","doi":"10.1136/bmjopen-2020-037443","title":"Randomised multicentre clinical trial to evaluate voriconazole pre-emptive genotyping strategy in patients with risk of aspergillosis: vorigenipharm study protocol","year":2020,"lang":"en","type":"article","venue":"BMJ Open","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"Spanish National Plan for Scientific and Technical Research and Innovation; European Regional Development Fund; Spanish Clinical Research Network; Instituto de Salud Carlos III; Consejería de Sanidad, Comunidad de Madrid","keywords":"Voriconazole; Medicine; CYP2C19; Aspergillosis; Clinical trial; Intensive care medicine; Internal medicine; Immunology; Antifungal","score_opus":0.1477908344682178,"score_gpt":0.4933942965583641,"score_spread":0.34560346209014625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3090336596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60591567,0.0000014556556,0.000028276629,0.00005819312,0.000029617104,0.39351118,0.000010815809,0.000009717693,0.00043507313],"genre_scores_gemma":[0.89388484,6.634817e-7,0.00031378452,0.00017529132,0.00011995386,0.10537003,0.000006671862,0.000022425626,0.00010635054],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9960899,0.0010070209,0.0012929728,0.00064256805,0.00068487495,0.00028267258],"domain_scores_gemma":[0.99813706,0.00022939034,0.00045639867,0.000483668,0.0003887564,0.0003047562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00287609,0.00022501682,0.0010535775,0.0000463149,0.000060318627,0.00003729253,0.0003409382,0.00008420738,0.00020012104],"category_scores_gemma":[0.0021760163,0.00015383484,0.00014081529,0.00033505133,0.000049542712,0.00015843369,0.00023249039,0.0002873148,0.000025918398],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.48493138,0.0021648682,0.5089306,0.00007523644,0.00018069871,0.000011590176,0.001198094,0.0000681041,0.000014897879,7.860145e-7,0.00007288462,0.0023508552],"study_design_scores_gemma":[0.38483682,0.008691344,0.6047055,0.00012715773,0.00020193824,5.5024397e-8,0.00092217745,0.00024290416,0.000102817976,0.0000024911046,0.00003972917,0.00012706598],"about_ca_topic_score_codex":0.00026242607,"about_ca_topic_score_gemma":0.00042271637,"teacher_disagreement_score":0.28814116,"about_ca_system_score_codex":0.00007861883,"about_ca_system_score_gemma":0.00060035,"threshold_uncertainty_score":0.6273203},"labels":[],"label_agreement":null},{"id":"W3091573649","doi":"10.1016/j.jse.2020.09.004","title":"Chronic, persistent fungal shoulder arthropathy secondary to genetic mutation: a case report","year":2020,"lang":"en","type":"article","venue":"Journal of Shoulder and Elbow Surgery","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hand and Upper Limb Clinic; Western University","funders":"","keywords":"Medicine; Candida albicans; Septic arthritis; Arthritis; Dermatology; Rheumatoid arthritis; Immunology; Microbiology; Biology","score_opus":0.038475997962758426,"score_gpt":0.29328266385880003,"score_spread":0.2548066658960416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3091573649","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97887135,0.009084445,0.002141616,0.008934957,0.00035992844,0.000194383,0.000008185855,0.000019420051,0.0003857439],"genre_scores_gemma":[0.9948088,0.0002612115,0.0005146941,0.0028445672,0.0012689172,0.0000031451887,0.000004150351,0.000025609612,0.00026889937],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9979608,0.00006337199,0.00089665543,0.00030354795,0.0004792432,0.00029636777],"domain_scores_gemma":[0.99828464,0.00015212696,0.00026470993,0.00020694299,0.00036241725,0.00072914036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000588609,0.0001992816,0.00066876906,0.00014050347,0.0001259686,0.000047509453,0.00004739915,0.0001099651,0.00045407913],"category_scores_gemma":[0.0004104748,0.00015989592,0.00048085063,0.00022856661,0.0000939244,0.00017230307,0.000038352704,0.000455465,0.0000075754174],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011398908,0.00016737959,0.2541487,0.0007110818,0.00042009677,0.6560637,0.0022790434,0.0001874926,0.0020113632,0.0000027283677,0.030026576,0.052842],"study_design_scores_gemma":[0.0016081871,0.0018199175,0.30999574,0.00041581492,0.00077240326,0.657311,0.004600555,0.00034531314,0.0014015452,0.000024568979,0.021224564,0.00048040575],"about_ca_topic_score_codex":0.00000882592,"about_ca_topic_score_gemma":0.000018128314,"teacher_disagreement_score":0.05584705,"about_ca_system_score_codex":0.00009657506,"about_ca_system_score_gemma":0.0007315585,"threshold_uncertainty_score":0.6520366},"labels":[],"label_agreement":null},{"id":"W3091792666","doi":"10.1016/j.bmc.2020.115810","title":"Preventing Candida albicans biofilm formation using aromatic-rich piperazines","year":2020,"lang":"en","type":"article","venue":"Bioorganic & Medicinal Chemistry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"PROTEO; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de recherche du Québec – Nature et technologies; Université Laval","keywords":"Chemistry; Candida albicans; Biofilm; Microbiology; Fungi imperfecti; Stereochemistry; Bacteria; Biochemistry","score_opus":0.038841832772419545,"score_gpt":0.281504729259507,"score_spread":0.24266289648708744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3091792666","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99298877,0.00072098925,0.0010805727,0.0022756394,0.000062963074,0.00022738382,0.000009334263,0.00011545588,0.002518881],"genre_scores_gemma":[0.99700755,0.00004796219,0.00075658126,0.00079802715,0.0007057007,0.00000422218,0.000061872925,0.000027533479,0.0005905502],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983097,0.000022381259,0.0004853589,0.00035554668,0.0004787993,0.00034826185],"domain_scores_gemma":[0.99904966,0.00004348096,0.00016756228,0.00028495648,0.000093254865,0.0003610613],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020733498,0.00022582225,0.0004077725,0.000021399137,0.0001292784,0.00002025597,0.00014140738,0.00015019623,0.0010585402],"category_scores_gemma":[0.0006530893,0.00019005346,0.000100644895,0.00037709792,0.00011233928,0.00012271953,0.000051180214,0.0002956623,0.00003906719],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010399151,0.00005443736,0.016707756,0.0010465245,0.00004152317,0.000049093414,0.0007430654,4.0922677e-7,0.9793555,0.0000014349858,0.00088147353,0.0010147952],"study_design_scores_gemma":[0.0019094781,0.00017009876,0.012542707,0.0007469309,0.00046786232,0.0002818784,0.0053179236,0.0027434109,0.9726605,0.000028512977,0.002729765,0.0004009461],"about_ca_topic_score_codex":0.00004972318,"about_ca_topic_score_gemma":0.0000070049505,"teacher_disagreement_score":0.00669501,"about_ca_system_score_codex":0.00016360669,"about_ca_system_score_gemma":0.00029794688,"threshold_uncertainty_score":0.9998546},"labels":[],"label_agreement":null},{"id":"W3092637456","doi":"10.3389/fimmu.2020.550827","title":"Aspergillus-Derived Galactosaminogalactan Triggers Complement Activation on Human Platelets","year":2020,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Austrian Science Fund","keywords":"Complement system; Aspergillus fumigatus; Platelet; Lectin pathway; Classical complement pathway; Microbiology; Anaphylatoxin; Immunology; Biology; Antibody opsonization; Innate immune system; Chemistry; Immune system; Opsonin; Phagocytosis","score_opus":0.04458735703881617,"score_gpt":0.297697990396896,"score_spread":0.2531106333580798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3092637456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880604,0.00023033739,0.0021430317,0.0035695,0.00036962586,0.0004915583,0.0000062016834,0.000078364945,0.0050509814],"genre_scores_gemma":[0.9972157,0.000097570286,0.00085579517,0.0014320535,0.00007868024,0.00001695543,0.00010239542,0.000022199876,0.00017866766],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985188,0.00010882921,0.00038424012,0.0004206469,0.00020143423,0.0003660399],"domain_scores_gemma":[0.9994122,0.00004162337,0.00010661349,0.000298105,0.000046914458,0.00009454728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012875593,0.00019610811,0.0005094999,0.00015577613,0.000101760736,0.000009591117,0.00013792687,0.00017422986,0.0003298017],"category_scores_gemma":[0.00016790284,0.00018550393,0.0001016562,0.00023612556,0.00018268317,0.000078069395,0.00003908886,0.00045927952,0.000040164137],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0075705317,0.0008382036,0.28531578,0.00013532194,0.00043508154,0.0001796981,0.0023183315,0.000018141936,0.6568291,0.0013417191,0.02459762,0.020420419],"study_design_scores_gemma":[0.0065137064,0.0024338842,0.88833773,0.00012370253,0.000045220477,0.000005544512,0.0025520755,0.0002891984,0.08074326,0.00032070963,0.018291203,0.0003437329],"about_ca_topic_score_codex":0.000034182776,"about_ca_topic_score_gemma":0.000011375944,"teacher_disagreement_score":0.603022,"about_ca_system_score_codex":0.00032230825,"about_ca_system_score_gemma":0.000073435316,"threshold_uncertainty_score":0.7564631},"labels":[],"label_agreement":null},{"id":"W3093079070","doi":"","title":"<i>Candida parapsilosis</i> Infection: A Multilocus Microsatellite Genotyping-Based Survey Demonstrating an Outbreak in Hospitalized Patients.","year":2020,"lang":"en","type":"article","venue":"PubMed","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stollery Children's Hospital; University of Alberta","funders":"","keywords":"Microsatellite; Genotyping; Genotype; Biology; Multiplex polymerase chain reaction; Locus (genetics); Allele; Candida parapsilosis; Multiplex; Genetics; Polymerase chain reaction; Gene","score_opus":0.04035900446169198,"score_gpt":0.2596190613512285,"score_spread":0.21926005688953648,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093079070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99698263,0.00015758346,0.00027401888,0.00031206178,0.0001096671,0.0014673043,0.00005730851,0.000116464995,0.0005229778],"genre_scores_gemma":[0.99723774,0.000025919799,0.00024617944,0.0018212633,0.00007555656,0.00032214334,0.00021745212,0.000030545718,0.000023209754],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978669,0.00024481007,0.0005264536,0.00055450527,0.00028936908,0.00051793305],"domain_scores_gemma":[0.99885726,0.0001038625,0.00013501527,0.00030254247,0.00017654718,0.00042477704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006395491,0.00023388937,0.0004566516,0.000076818695,0.00008842004,0.00005142963,0.0000946456,0.00013985684,0.00002311892],"category_scores_gemma":[0.00085210963,0.000217127,0.00012439648,0.0005195234,0.000107584834,0.00017352133,0.000027081722,0.00028827283,0.000014267549],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011194628,0.0003913857,0.9734388,0.0001033176,0.000022453587,0.0000143911275,0.00016548023,0.000016561304,0.00019808002,0.0000028729437,0.00005305822,0.024474109],"study_design_scores_gemma":[0.0033023073,0.00018059216,0.9938705,0.000027413605,0.00003339414,5.922998e-7,0.000017498603,0.0004898523,0.0015446114,0.000008081909,0.00030472619,0.00022046031],"about_ca_topic_score_codex":0.0011801538,"about_ca_topic_score_gemma":0.0017851391,"teacher_disagreement_score":0.024253648,"about_ca_system_score_codex":0.00012524049,"about_ca_system_score_gemma":0.00010880995,"threshold_uncertainty_score":0.8854182},"labels":[],"label_agreement":null},{"id":"W3093419969","doi":"10.1128/msphere.00646-20","title":"High-Resolution Genome-Wide Occupancy in <i>Candida</i> spp. Using ChEC-seq","year":2020,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Biology; ChIP-on-chip; Chromatin immunoprecipitation; ChIP-sequencing; Chromatin; Tiling array; Genetics; Candida albicans; Genome; Computational biology; DNA microarray; Gene; Promoter; Gene expression; Nucleosome","score_opus":0.03169606090837775,"score_gpt":0.2690931908869091,"score_spread":0.23739712997853132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093419969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992226,0.0018520458,0.001530682,0.0014599982,0.00008123363,0.0002931066,0.000011398498,0.00006900893,0.002476499],"genre_scores_gemma":[0.9949833,0.000080982994,0.0020208985,0.0021693478,0.00023729357,0.0000044811522,0.000019881343,0.000022505372,0.00046128553],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998729,0.00005371908,0.00030225705,0.00035937544,0.00023576565,0.00031987322],"domain_scores_gemma":[0.9994133,0.000038110153,0.00006157366,0.0002539653,0.000051521103,0.00018149072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015484777,0.00015365492,0.00034448906,0.000020346972,0.000071033195,0.00001577058,0.00008675211,0.00011281927,0.0008657365],"category_scores_gemma":[0.00023092919,0.00014110861,0.00009251338,0.00033202706,0.000060613547,0.00009724118,0.000043523298,0.00031749843,0.00019969855],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067246606,0.00010771332,0.9589946,0.0002506453,0.00002513472,0.00017102234,0.00039638646,0.00014551906,0.035811298,0.0000590605,0.0023138872,0.0010522235],"study_design_scores_gemma":[0.0020675585,0.00021113157,0.9823602,0.0001935644,0.000066502704,0.0000064065357,0.00063154486,0.0016177072,0.002744921,0.0001642905,0.00966989,0.00026631696],"about_ca_topic_score_codex":0.00037927227,"about_ca_topic_score_gemma":0.00040879886,"teacher_disagreement_score":0.033066377,"about_ca_system_score_codex":0.00017325365,"about_ca_system_score_gemma":0.00015621656,"threshold_uncertainty_score":0.9479208},"labels":[],"label_agreement":null},{"id":"W3093807449","doi":"10.1101/2020.10.22.350991","title":"Systematic characterization and genetic interaction analysis of adhesins in <i>Candida albicans</i> virulence","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Mitacs; John S. Dunn Foundation","keywords":"Bacterial adhesin; Virulence; Candida albicans; Biology; Mutant; Corpus albicans; Microbiology; Gene; Genetics; Biofilm; Fungal protein; Bacteria","score_opus":0.014294589509208613,"score_gpt":0.24202699404741185,"score_spread":0.22773240453820323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093807449","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99417245,0.00053105905,0.00383242,0.00017351998,0.00015588473,0.00092414144,0.00014627459,0.00006171118,0.0000025629395],"genre_scores_gemma":[0.9983439,0.00068857236,0.00057433086,0.00020620372,0.000061462495,0.00008291946,0.0000022119439,0.0000376308,0.0000028033096],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976309,0.00017029616,0.000902775,0.0007281511,0.00034417518,0.00022373548],"domain_scores_gemma":[0.9980556,0.00008448329,0.0006067639,0.00074736454,0.00028475758,0.00022107114],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030666174,0.0003140246,0.0013080334,0.0005139916,0.000034712317,0.00005035288,0.00014843994,0.0002707989,0.000028872873],"category_scores_gemma":[0.00060670206,0.00031189132,0.00018865814,0.0011545965,0.000093808434,0.00010163087,0.00013034731,0.00043006122,0.000005530485],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011092699,0.0001029265,0.22502144,0.015459946,0.0005811322,0.0000459459,0.000035560584,0.000015462663,0.7585988,0.000024216828,0.0000025027741,0.0000011568843],"study_design_scores_gemma":[0.0002830861,0.000063526015,0.95154047,0.0054797237,0.0022232358,1.6726604e-8,0.0000117159425,0.00467238,0.03546748,2.8366568e-7,0.000015557778,0.00024254358],"about_ca_topic_score_codex":0.00009673508,"about_ca_topic_score_gemma":0.000027933913,"teacher_disagreement_score":0.726519,"about_ca_system_score_codex":0.0002171,"about_ca_system_score_gemma":0.00035625245,"threshold_uncertainty_score":0.9999333},"labels":[],"label_agreement":null},{"id":"W3093927132","doi":"10.14740/jmc3588","title":"A COVID-19 Case Complicated by <i>Candida dubliniensis</i> and <i>Klebsiella pneumoniae</i>-Carbapenem-Resistant Enterobacteriaceae","year":2020,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Klebsiella pneumoniae; Candida dubliniensis; Microbiology; Pneumonia; Meropenem; Klebsiella pneumonia; Streptococcus pneumoniae; Enterobacteriaceae; Immunosuppression; Mycoplasma pneumoniae; Virology; Antibiotics; Pseudomonas aeruginosa; Internal medicine; Biology; Antibiotic resistance; Escherichia coli; Bacteria; Dermatology","score_opus":0.04424841404502969,"score_gpt":0.3259831059187289,"score_spread":0.28173469187369926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093927132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9358643,0.0030772109,0.0004091746,0.06009596,0.0001253544,0.00019451803,0.00008073379,0.000032025302,0.00012068799],"genre_scores_gemma":[0.9675495,0.0011686753,0.000121728044,0.030741334,0.00032070858,0.0000021849673,0.000014291721,0.000021841613,0.00005971423],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970222,0.00018882671,0.00095197186,0.00033311732,0.0011778555,0.00032603758],"domain_scores_gemma":[0.99493015,0.0007035759,0.00038935334,0.00021739506,0.0002264263,0.0035331273],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009006813,0.00023951674,0.0008212043,0.000067230285,0.00013598826,0.000059858274,0.00018706103,0.00020887969,0.0008460184],"category_scores_gemma":[0.006716356,0.00017330513,0.00022072575,0.00024630816,0.00037935685,0.000112969334,0.00010361334,0.0006634215,0.000009163332],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01131642,0.0012181642,0.13265778,0.0017104757,0.00053769327,0.3147184,0.0014028031,0.0000015479092,0.09782068,0.000080496626,0.434456,0.0040795505],"study_design_scores_gemma":[0.02352116,0.010888373,0.01491936,0.001206906,0.00150167,0.34439635,0.0062425216,0.00067454565,0.003633663,0.00011049392,0.59188277,0.0010221665],"about_ca_topic_score_codex":0.000119070864,"about_ca_topic_score_gemma":0.000095586765,"teacher_disagreement_score":0.1574268,"about_ca_system_score_codex":0.00011211387,"about_ca_system_score_gemma":0.0011149928,"threshold_uncertainty_score":0.9263308},"labels":[],"label_agreement":null},{"id":"W3094638219","doi":"10.1016/j.ijid.2020.10.092","title":"Candida colonization as a predictor of invasive candidiasis in non-neutropenic ICU patients with sepsis: A systematic review and meta-analysis","year":2020,"lang":"en","type":"review","venue":"International Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; Sunnybrook Hospital; University of Toronto","funders":"","keywords":"Medicine; Meta-analysis; Colonization; Invasive candidiasis; Sepsis; Intensive care medicine; Internal medicine; Microbiology; Biology; Antifungal; Dermatology; Fluconazole","score_opus":0.017059592328485498,"score_gpt":0.3144432705614559,"score_spread":0.2973836782329704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3094638219","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004580162,0.99293315,0.000028813924,0.000096902295,0.000049325132,0.0018501492,0.0004228192,0.0000064687206,0.00003222706],"genre_scores_gemma":[0.20836006,0.7910904,0.000008955353,0.00026311786,0.000031101525,0.0000928546,0.000110694215,0.000020361613,0.000022439719],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9968363,0.00029802465,0.0016225635,0.00026919734,0.0008530092,0.00012090975],"domain_scores_gemma":[0.99531364,0.0003699173,0.0023651782,0.00021220995,0.0015227312,0.00021631869],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022879324,0.00032732054,0.005502952,0.0006418136,0.000023123728,0.000043377087,0.0002194362,0.000091327915,0.00015178912],"category_scores_gemma":[0.0017846089,0.00019376262,0.0016103954,0.0007953702,0.000075038326,0.00019714223,0.00005263882,0.00025541062,0.0000034132179],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026236675,0.00081649044,0.12388571,0.5854511,0.28852004,0.0003050688,0.00011523383,0.000008835409,1.0059118e-7,0.0000084128,0.00013844112,0.00048814018],"study_design_scores_gemma":[0.0010516158,0.0007405574,0.013214841,0.079886355,0.9044944,0.000085962354,0.000029772207,0.0000018280946,4.2291018e-7,0.0000102241265,0.00029790183,0.00018613075],"about_ca_topic_score_codex":0.00013652675,"about_ca_topic_score_gemma":0.00036758865,"teacher_disagreement_score":0.61597437,"about_ca_system_score_codex":0.0004102004,"about_ca_system_score_gemma":0.0011222909,"threshold_uncertainty_score":0.79014105},"labels":[],"label_agreement":null},{"id":"W3094879633","doi":"10.1093/jpids/piaa119","title":"A Randomized Trial of Caspofungin vs Triazoles Prophylaxis for Invasive Fungal Disease in Pediatric Allogeneic Hematopoietic Cell Transplant","year":2020,"lang":"en","type":"article","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Institutes of Health; National Cancer Institute; St. Baldrick's Foundation","keywords":"Caspofungin; Medicine; Hematopoietic stem cell transplantation; Randomized controlled trial; Hematopoietic cell; Internal medicine; Voriconazole; Disease; Intensive care medicine; Oncology; Antifungal; Haematopoiesis; Stem cell; Dermatology","score_opus":0.012890555774229833,"score_gpt":0.24880561589401237,"score_spread":0.23591506011978253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3094879633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98992634,0.005359204,0.00046324095,0.0006466153,0.00044139093,0.0029464252,0.00017621972,0.000020809395,0.000019759824],"genre_scores_gemma":[0.9913569,0.006310796,0.0000707532,0.0003240866,0.0017940837,0.000073814525,0.0000074946593,0.000033451026,0.000028625514],"study_design_codex":"observational","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9968401,0.00039434122,0.0013950415,0.00029882634,0.0007109013,0.00036076564],"domain_scores_gemma":[0.9963808,0.0013673373,0.001104074,0.00027454505,0.00038518282,0.00048806873],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009540871,0.00030029463,0.0013839044,0.00012168562,0.000120256744,0.00002206352,0.00026651926,0.00015635515,0.000026835523],"category_scores_gemma":[0.002137291,0.00019248761,0.0033191978,0.00080973096,0.00014842243,0.000119836186,0.00004678587,0.00048090608,0.0000017764377],"study_design_candidate":"randomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.3983056,0.0010754981,0.59588265,0.002547957,0.0001202976,0.000032956832,0.0010411046,0.00022094531,0.00009308229,0.000008620607,0.00065367174,0.00001762344],"study_design_scores_gemma":[0.93070453,0.0027406565,0.056186818,0.00009790603,0.008582796,0.00005593478,0.0003328226,0.00023942243,0.00015871813,0.00053703133,0.000011919523,0.00035145608],"about_ca_topic_score_codex":0.000012597755,"about_ca_topic_score_gemma":0.0000066342795,"teacher_disagreement_score":0.53969586,"about_ca_system_score_codex":0.00016136176,"about_ca_system_score_gemma":0.0019692262,"threshold_uncertainty_score":0.7849417},"labels":[],"label_agreement":null},{"id":"W3095191031","doi":"10.1007/s11748-020-01522-z","title":"A case of primary pulmonary Schizophyllum commune empyema treated with video-assisted thoracoscopic decortication","year":2020,"lang":"en","type":"article","venue":"General Thoracic and Cardiovascular Surgery","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Humber River Regional Hospital; St Joseph's Health Centre; University of Toronto","funders":"","keywords":"Decortication; Schizophyllum commune; Empyema; Medicine; Surgery; Productive Cough; Video-assisted thoracoscopic surgery; General surgery; Lung; Biology; Internal medicine","score_opus":0.04034323850587632,"score_gpt":0.26742188956569213,"score_spread":0.2270786510598158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3095191031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9809884,0.015470293,0.002120607,0.00019675368,0.000034037177,0.00041253734,0.000018466351,0.00008279789,0.00067613093],"genre_scores_gemma":[0.99679226,0.0009816092,0.0015255788,0.0003088744,0.00013885804,0.00003053892,0.000118425465,0.00003751197,0.00006636722],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99797124,0.0003322582,0.00049197534,0.0005129635,0.00040744853,0.00028409046],"domain_scores_gemma":[0.99850965,0.000113873946,0.00011813227,0.00075106183,0.00021817016,0.0002890965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066929683,0.00025863017,0.0011629594,0.00009174785,0.00013862303,0.000021162741,0.00006253551,0.00013601374,0.000027771372],"category_scores_gemma":[0.00011119747,0.00020203463,0.00065446814,0.0005291723,0.0002128894,0.0001341444,0.000058785412,0.00021866935,0.000005533441],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003423479,0.00027745133,0.5754841,0.0019848307,0.0022377796,0.009603662,0.00016485578,0.00003439367,0.02196956,0.000020817217,0.00022763123,0.38457146],"study_design_scores_gemma":[0.001084447,0.00038532622,0.9722978,0.00046855817,0.0027516496,0.0068429704,0.000573555,0.0009819524,0.01301648,0.000023299606,0.00096864044,0.0006053336],"about_ca_topic_score_codex":0.0001606193,"about_ca_topic_score_gemma":0.000012866933,"teacher_disagreement_score":0.3968137,"about_ca_system_score_codex":0.000036792848,"about_ca_system_score_gemma":0.00019408848,"threshold_uncertainty_score":0.82387334},"labels":[],"label_agreement":null},{"id":"W3095495074","doi":"10.3390/microorganisms8111673","title":"Comparative Genome Sequence Analyses of Geographic Samples of Aspergillus fumigatus—Relevance for Amphotericin B Resistance","year":2020,"lang":"en","type":"article","venue":"Microorganisms","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Michael G. DeGroote Institute for Infectious Disease Research, McMaster University; McMaster University","keywords":"Aspergillus fumigatus; Biology; Single-nucleotide polymorphism; Drug resistance; Amphotericin B; Population; Genome; Microbiology; Genetics; Whole genome sequencing; Gene; Genotype; Antifungal; Medicine","score_opus":0.14074119717841102,"score_gpt":0.36249744156760644,"score_spread":0.22175624438919542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3095495074","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9862621,0.0029534432,0.008886041,0.00057494553,0.000039234747,0.0005636246,0.00048253106,0.000036798716,0.00020131409],"genre_scores_gemma":[0.9826161,0.00020455309,0.016314339,0.00049033354,0.000046570567,0.000008947992,0.00008501637,0.000022166412,0.00021193642],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99843156,0.000043104745,0.0005804445,0.000431773,0.00024661497,0.00026651006],"domain_scores_gemma":[0.9986239,0.0001723031,0.00028888893,0.00037173624,0.0004040506,0.00013909469],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014748175,0.00020894973,0.00091270485,0.00006865283,0.00006623132,0.0000074780655,0.00020187888,0.00008676221,0.000104142324],"category_scores_gemma":[0.00022633042,0.00018248269,0.00024150763,0.0004962568,0.00044541922,0.00006864745,0.00004120785,0.00012767148,0.0000067371852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093744276,0.00008671933,0.013730531,0.0006782924,0.00014275464,0.0000047033304,0.0013594523,0.000009858356,0.9827038,0.00016526385,0.00012729062,0.000053896212],"study_design_scores_gemma":[0.0009099061,0.000449895,0.103591695,0.00012462623,0.00017947689,0.0000022931529,0.00064270664,0.000022770531,0.88940954,0.00018852466,0.0043096235,0.00016892802],"about_ca_topic_score_codex":0.00006841084,"about_ca_topic_score_gemma":0.00008396234,"teacher_disagreement_score":0.09329424,"about_ca_system_score_codex":0.00004350806,"about_ca_system_score_gemma":0.00014857273,"threshold_uncertainty_score":0.74414283},"labels":[],"label_agreement":null},{"id":"W3096938332","doi":"10.1017/ice.2020.542","title":"Whole-Genome Sequencing Reveals a Novel Subclade of Pansusceptible <i>Candida auris</i> in Ontario, Canada","year":2020,"lang":"en","type":"article","venue":"Infection Control and Hospital Epidemiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; Health Sciences Centre; Sunnybrook Health Science Centre; Baycrest Hospital; University Health Network; University of Toronto; Markham Stouffville Hospital","funders":"","keywords":"Candida auris; Subclade; Whole genome sequencing; Biology; Clade; Phylogenetic tree; Genome; Microbiology; Genetics; Antifungal; Gene","score_opus":0.030657391715658833,"score_gpt":0.26023811787226575,"score_spread":0.2295807261566069,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3096938332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98827505,0.0006931934,0.0021407527,0.007622081,0.00014611514,0.00042061458,0.00005111617,0.000022625327,0.0006284582],"genre_scores_gemma":[0.9940448,0.00007165781,0.00014895345,0.005430937,0.00010064015,0.000019569832,0.000028629367,0.000010687582,0.00014416574],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983013,0.00013161878,0.00072065415,0.00039051287,0.00010466327,0.00035121446],"domain_scores_gemma":[0.9988252,0.00046100866,0.00022627557,0.00015531483,0.00010187938,0.00023035443],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006109817,0.00017514694,0.00095024257,0.000053484542,0.000051484763,0.0000033271103,0.000045079574,0.00015959369,0.000077888704],"category_scores_gemma":[0.001391998,0.00015290514,0.00010579621,0.00014714256,0.0001344131,0.0000757192,0.000022720693,0.00042006595,0.000002791664],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030967558,0.000049544953,0.9508284,0.000089080124,0.00006095571,0.000017905155,0.0002414986,0.00013990978,0.04730781,0.00021147447,0.00049902056,0.00024472317],"study_design_scores_gemma":[0.0023541872,0.0008425702,0.98997706,0.000051876905,0.000059174952,0.000010877209,0.00007670712,0.00040748587,0.000051260115,0.00018508457,0.005841609,0.00014212278],"about_ca_topic_score_codex":0.9313362,"about_ca_topic_score_gemma":0.9571469,"teacher_disagreement_score":0.04725655,"about_ca_system_score_codex":0.00043591295,"about_ca_system_score_gemma":0.0008542129,"threshold_uncertainty_score":0.623529},"labels":[],"label_agreement":null},{"id":"W3097833619","doi":"10.1111/febs.15622","title":"Mechanisms to reduce the cytotoxicity of pharmacological nicotinamide concentrations in the pathogenic fungus <i>Candida albicans</i>","year":2020,"lang":"en","type":"article","venue":"FEBS Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Canadian Institutes of Health Research; Roy J. Carver Charitable Trust","keywords":"Candida albicans; NAD+ kinase; Biology; Sirtuin; Corpus albicans; Cytotoxicity; Nicotinamide; Intracellular; Metabolome; Sirtuin 1; Microbiology; Acetylation; Histone deacetylase; Biochemistry; Metabolite; Histone; In vitro; Downregulation and upregulation; Enzyme; Gene","score_opus":0.039724601501221285,"score_gpt":0.3158483071214511,"score_spread":0.2761237056202298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097833619","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97186774,0.00027684626,0.0035568483,0.022727177,0.00009960521,0.0005056383,0.000019758383,0.000010007571,0.0009363986],"genre_scores_gemma":[0.988719,0.00011675091,0.0003512251,0.010528242,0.00020479324,0.000010927198,0.0000022041195,0.000006643536,0.000060230912],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984842,0.0002801441,0.00040084677,0.0001672326,0.00041191396,0.00025567482],"domain_scores_gemma":[0.99923944,0.0001755622,0.00012011299,0.00015904449,0.00010591379,0.00019994828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007746962,0.00010849585,0.00024277628,0.000021418975,0.00016677055,0.000028622144,0.0002853662,0.000052191117,0.00048602614],"category_scores_gemma":[0.00044580005,0.000055225133,0.00015099367,0.00034372645,0.00009751896,0.000051022485,0.00003495288,0.0006221522,0.000015950829],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008887829,0.00020062507,0.014036147,0.000014930592,0.00005243315,0.00014526813,0.0022075046,0.000052996165,0.97512054,0.00096162455,0.0055829184,0.0007362108],"study_design_scores_gemma":[0.0043911445,0.0027731466,0.8028835,0.0001780839,0.0005689495,0.00074648997,0.0102191605,0.00072969747,0.17024748,0.0021874984,0.0047335937,0.00034125056],"about_ca_topic_score_codex":0.000010646853,"about_ca_topic_score_gemma":0.000040402818,"teacher_disagreement_score":0.80487305,"about_ca_system_score_codex":0.000063752916,"about_ca_system_score_gemma":0.00023280524,"threshold_uncertainty_score":0.5321645},"labels":[],"label_agreement":null},{"id":"W3102300687","doi":"10.1128/mbio.02329-20","title":"The Transcription Factor SomA Synchronously Regulates Biofilm Formation and Cell Wall Homeostasis in <i>Aspergillus fumigatus</i>","year":2020,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Institute of Infection and Immunity; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; National Key Research and Development Program of China; Canadian Institutes of Health Research; Priority Academic Program Development of Jiangsu Higher Education Institutions; Program for Jiangsu Excellent Scientific and Technological Innovation Team; National Natural Science Foundation of China; Government of Canada","keywords":"Biofilm; Cell biology; Transcription factor; Biology; Cell wall; Aspergillus fumigatus; Soma; Biochemistry; Gene; Microbiology; Bacteria; Genetics","score_opus":0.01707853158406333,"score_gpt":0.2254943564888343,"score_spread":0.20841582490477098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3102300687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909945,0.0025693579,0.00007190681,0.0054508015,0.000042360974,0.00032320723,0.000018891214,0.000044166198,0.0004847769],"genre_scores_gemma":[0.9979256,0.0010579778,0.00006349912,0.0007101989,0.00004082235,0.000006474134,0.000028102319,0.000011027759,0.00015633779],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99914604,0.000038610357,0.00024071321,0.00020445956,0.000158939,0.00021123294],"domain_scores_gemma":[0.99960464,0.000041922187,0.0000446098,0.0001591797,0.000038360202,0.000111297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000106860956,0.00011623505,0.00018122623,0.00002644793,0.00011226378,0.000033455166,0.00005767653,0.000087416694,0.0000397227],"category_scores_gemma":[0.000041331492,0.00008003699,0.000061157734,0.00014940924,0.00008772697,0.00015937949,0.000013360524,0.00015337534,0.00002601016],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013438022,0.00017377405,0.073865294,0.000802436,0.000033658685,0.000036355395,0.009521556,0.0000036511017,0.8493231,0.000161145,0.0021850788,0.06255014],"study_design_scores_gemma":[0.0031979855,0.0008292623,0.6635044,0.00014156716,0.00007669003,0.000012061407,0.003021071,0.0022226658,0.30080497,0.00023977626,0.025607463,0.00034204495],"about_ca_topic_score_codex":0.000060332368,"about_ca_topic_score_gemma":0.0002738812,"teacher_disagreement_score":0.5896392,"about_ca_system_score_codex":0.000067146146,"about_ca_system_score_gemma":0.000036688733,"threshold_uncertainty_score":0.3263814},"labels":[],"label_agreement":null},{"id":"W3102456690","doi":"10.1126/science.abf1675","title":"Drugs from bugs in creatures of the sea","year":2020,"lang":"en","type":"letter","venue":"Science","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Creatures; Microbiome; Biology; Antifungal; Natural product; Natural (archaeology); Bacteria; Zoology; Computational biology; Microbiology; Bioinformatics; Genetics; Paleontology","score_opus":0.015148109321610865,"score_gpt":0.27250887129322215,"score_spread":0.2573607619716113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3102456690","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27326983,0.00054074964,0.0000045653246,0.7176562,0.00035713182,0.0002865194,0.00007766498,0.000015884372,0.0077914763],"genre_scores_gemma":[0.62683356,0.000017114176,0.00010564606,0.37126252,0.0004099766,0.0000023281361,0.000010657748,0.0000063978696,0.0013517904],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9983289,0.000039768318,0.0001793772,0.00040909802,0.00082451786,0.00021832733],"domain_scores_gemma":[0.9991204,0.000112272726,0.00008228413,0.0005645425,0.00007640306,0.000044107583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022577686,0.00010804129,0.00027594916,0.00005431585,0.000056732726,0.000014802721,0.0005313129,0.0001441055,0.00009849261],"category_scores_gemma":[0.0005759807,0.00006295265,0.00009793196,0.00065320067,0.0011166333,0.000050205796,0.00012245165,0.0009946721,0.00001873276],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056601144,0.000026815127,0.20336886,0.00019501668,0.000008896122,0.00013247691,0.0010193664,3.410893e-7,0.013629146,0.000014707673,0.78071326,0.0008345305],"study_design_scores_gemma":[0.00032647484,0.00006126245,0.76620126,0.0006545647,0.000047603775,0.0000017973149,0.00020457995,0.00003584842,0.015189998,0.0015250879,0.21557881,0.00017272722],"about_ca_topic_score_codex":0.00032085518,"about_ca_topic_score_gemma":0.00004818502,"teacher_disagreement_score":0.5651344,"about_ca_system_score_codex":0.000076357945,"about_ca_system_score_gemma":0.00067786354,"threshold_uncertainty_score":0.43214104},"labels":[],"label_agreement":null},{"id":"W3106668659","doi":"10.1101/2020.11.30.405712","title":"Balancing positive and negative selection: <i>in vivo</i> evolution of <i>Candida lusitaniae MRR1</i>","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Julius-Maximilians-Universität Würzburg; Dartmouth College; National Institute of General Medical Sciences; Canadian Institute for Advanced Research; Cystic Fibrosis Foundation; National Cancer Institute; National Institutes of Health; National Science Foundation","keywords":"Biology; Population; Allele; Virulence; Genetics; Drug resistance; Fluconazole; Microbiology; Gene; Antifungal","score_opus":0.008057999460139877,"score_gpt":0.22150356093410598,"score_spread":0.2134455614739661,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3106668659","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99496114,0.0016421463,0.0014121332,0.0003747095,0.00021488545,0.00093123625,0.0002450427,0.00012722253,0.000091498456],"genre_scores_gemma":[0.99668175,0.00027743334,0.002431374,0.0002479256,0.00024868717,0.000043752247,2.2154565e-7,0.00006140699,0.0000074286418],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99749875,0.0001120699,0.0006152597,0.00096146326,0.0004194162,0.00039304813],"domain_scores_gemma":[0.9982833,0.00012380464,0.00035175213,0.00040455174,0.0005706958,0.00026585624],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00042934107,0.0004292038,0.0009329314,0.00020389614,0.00009592959,0.000039569615,0.00013766307,0.00042998785,0.000038843755],"category_scores_gemma":[0.0004474896,0.00045528286,0.0001478455,0.00072774827,0.00019684111,0.00013410709,0.00022716945,0.0008748293,0.0000066893126],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003976506,0.000114585164,0.28170326,0.00082698686,0.000115292445,0.00005736432,0.000045505793,0.000006432899,0.7161141,0.00044439154,0.00017321607,0.0000012117848],"study_design_scores_gemma":[0.00097029033,0.00019440074,0.7347196,0.0012763845,0.00018427878,6.6087615e-8,0.00003090535,0.00044689066,0.26167506,0.000012035646,0.00013131811,0.00035878154],"about_ca_topic_score_codex":0.0004355444,"about_ca_topic_score_gemma":0.000074495496,"teacher_disagreement_score":0.45443904,"about_ca_system_score_codex":0.00079293764,"about_ca_system_score_gemma":0.0010254638,"threshold_uncertainty_score":0.9997899},"labels":[],"label_agreement":null},{"id":"W3107203535","doi":"10.15698/mic2020.12.738","title":"Maintaining phagosome integrity during fungal infection: do or die?","year":2020,"lang":"en","type":"letter","venue":"Microbial Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"","keywords":"Phagosome; Candida albicans; Biology; Microbiology; Cell biology; Innate immune system; Endosome; Phagocytosis; Intracellular; Immune system; Immunology","score_opus":0.027670317601022995,"score_gpt":0.2684796879352786,"score_spread":0.2408093703342556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3107203535","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.58474904,0.0012724705,0.00019871048,0.39084768,0.0027071359,0.0017421455,0.000339456,0.00070739747,0.017435975],"genre_scores_gemma":[0.49025673,0.0005589805,0.0004953537,0.4449648,0.02008865,0.000027439497,0.00062060764,0.00021025677,0.04277718],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.997214,0.00014703389,0.0005937102,0.00095584773,0.0003808339,0.0007085485],"domain_scores_gemma":[0.9987334,0.00010678543,0.00021284563,0.00060408603,0.00015545759,0.00018743034],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017688295,0.0005626073,0.0009661,0.00014850919,0.00024623788,0.000103578495,0.00021174984,0.0009482371,0.0024795712],"category_scores_gemma":[0.00016895235,0.00046605265,0.0004973242,0.0002376566,0.00018570737,0.00010435118,0.00019070912,0.0054348847,0.000764141],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012877331,0.00011925262,0.0097529525,0.0030938117,0.00012127488,0.010283769,0.00030491548,4.224684e-7,0.060355123,0.0000014160976,0.9143815,0.00029783274],"study_design_scores_gemma":[0.0018958866,0.00041360498,0.0053632744,0.0006463214,0.00033380828,0.00027194284,0.0000720531,0.0000030963947,0.020965677,0.000023941331,0.9693424,0.00066798314],"about_ca_topic_score_codex":0.00014521542,"about_ca_topic_score_gemma":0.0001086075,"teacher_disagreement_score":0.0944923,"about_ca_system_score_codex":0.0004653269,"about_ca_system_score_gemma":0.00047116936,"threshold_uncertainty_score":0.9997791},"labels":[],"label_agreement":null},{"id":"W3108198681","doi":"10.14740/gr1255","title":"Fungal Infection in Acutely Decompensated Cirrhosis Patients: Value of Model for End-Stage Liver Disease Score","year":2020,"lang":"en","type":"article","venue":"Gastroenterology Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Internal medicine; Ascites; Gastroenterology; Odds ratio; White blood cell; Cirrhosis; Confidence interval; Systemic inflammatory response syndrome; Complete blood count; Spontaneous bacterial peritonitis; Logistic regression; Urinalysis; Model for End-Stage Liver Disease; Concordance; Liver disease; Sepsis; Urine; Liver transplantation","score_opus":0.13461138170897652,"score_gpt":0.3801048045809086,"score_spread":0.2454934228719321,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3108198681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99391466,0.000037847873,0.0038317237,0.00091761356,0.00003182553,0.001032565,0.00017232259,0.000022541684,0.000038903592],"genre_scores_gemma":[0.9985703,0.000083269304,0.00040572337,0.0005696145,0.000040266834,0.000084858104,0.00012278145,0.000020154534,0.00010300602],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979306,0.00026134434,0.00037786816,0.0004493213,0.00040717042,0.0005737097],"domain_scores_gemma":[0.9987253,0.0001253032,0.00006579616,0.00026568706,0.000489075,0.00032886243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006025132,0.00013304708,0.0003705673,0.00020940286,0.0000696647,0.0000079145075,0.00013073144,0.000096716,0.000104431776],"category_scores_gemma":[0.00077817624,0.00012275619,0.00014513211,0.00025221947,0.00028160823,0.000102089034,0.00012481288,0.00044351228,0.00001201978],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014527436,0.00054484524,0.9815877,0.0004237047,0.000044476496,0.000028272043,0.00026845545,0.00025971016,0.0013093223,0.00009294769,0.0006201108,0.0002929816],"study_design_scores_gemma":[0.002656709,0.0014706285,0.9024118,0.000055006185,0.00003061585,7.671537e-7,0.000024956773,0.0930379,0.00019685748,0.000047518777,0.000023838236,0.00004339808],"about_ca_topic_score_codex":0.00013173766,"about_ca_topic_score_gemma":0.00045705115,"teacher_disagreement_score":0.09277819,"about_ca_system_score_codex":0.00011671949,"about_ca_system_score_gemma":0.00017612989,"threshold_uncertainty_score":0.5005852},"labels":[],"label_agreement":null},{"id":"W3109520480","doi":"10.1016/j.bioorg.2020.104484","title":"Structurally homologous sialidases exhibit a commonality in reactivity: Glycoside hydrolase-catalyzed hydrolysis of Kdn-thioglycosides","year":2020,"lang":"en","type":"article","venue":"Bioorganic Chemistry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Chemistry; Aspergillus fumigatus; Sialidase; Enzyme kinetics; Stereochemistry; Glycoconjugate; Hydrolysis; Enzyme; Hydrolase; Biochemistry; Glycoside hydrolase; Cyclopropanation; Aryl; Active site; Catalysis; Organic chemistry; Neuraminidase; Microbiology; Biology; Alkyl","score_opus":0.024166394211961692,"score_gpt":0.25009561972873834,"score_spread":0.22592922551677663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3109520480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99623513,0.000558015,0.000019357658,0.001568443,0.000018756518,0.0002581958,0.00007943751,0.00009855568,0.0011641082],"genre_scores_gemma":[0.99907184,0.00005462427,0.000144391,0.00033731043,0.00012511824,0.000008391161,0.000121851124,0.000033746124,0.00010273645],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99778754,0.00006309449,0.0006899723,0.0006478485,0.00043988356,0.00037167824],"domain_scores_gemma":[0.9984643,0.0002035121,0.00025945646,0.000675501,0.00010563046,0.0002916119],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00025048424,0.00031331385,0.0008865529,0.00003578096,0.000052809555,0.000018228135,0.00025143073,0.00027354382,0.0006938902],"category_scores_gemma":[0.001140258,0.00029310287,0.00026931413,0.0005223564,0.00028140668,0.00010868648,0.00014512904,0.00045690188,0.000022875622],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009381887,0.00023100585,0.11681427,0.00061342027,0.000080137426,0.00019314964,0.00020340754,0.0000014842461,0.8800843,0.0000047181525,0.00015832171,0.0006776332],"study_design_scores_gemma":[0.0015684305,0.00007987511,0.07525291,0.0001283615,0.00014022719,0.00006885986,0.00036827085,0.00011703458,0.9218091,0.000111873705,0.00010600638,0.00024905012],"about_ca_topic_score_codex":0.0003137163,"about_ca_topic_score_gemma":0.000073227224,"teacher_disagreement_score":0.04172484,"about_ca_system_score_codex":0.00017083887,"about_ca_system_score_gemma":0.00031884958,"threshold_uncertainty_score":0.99995214},"labels":[],"label_agreement":null},{"id":"W3110033516","doi":"10.1016/j.csbj.2020.11.034","title":"Loss of Arp1, a putative actin-related protein, triggers filamentous and invasive growth and impairs pathogenicity in <i>Candida albicans</i>","year":2020,"lang":"en","type":"article","venue":"Computational and Structural Biotechnology Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Candida albicans; Virulence; Biology; Corpus albicans; Cell biology; Microbiology; Fungal protein; Saccharomyces cerevisiae; Yeast; Gene; Genetics","score_opus":0.009184406540918193,"score_gpt":0.2391558911016641,"score_spread":0.2299714845607459,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3110033516","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990534,0.00085476943,0.00029948322,0.007935207,0.000017876306,0.0002890957,0.000033106262,0.000018542603,0.00001788733],"genre_scores_gemma":[0.9977128,0.00026861104,0.0016970843,0.0002807122,0.000016333597,0.0000022132062,0.000011105047,0.000006269566,0.000004903805],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99894303,0.000061140905,0.00038711246,0.00026587036,0.0001650295,0.00017781442],"domain_scores_gemma":[0.9993746,0.000118752934,0.00020261726,0.000043361168,0.00010401582,0.00015663083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000112137735,0.00015243399,0.00038409742,0.00012423124,0.000112359514,0.000017128365,0.000054889162,0.00019158566,0.00001659591],"category_scores_gemma":[0.00032906118,0.00011635922,0.000047621732,0.00023692554,0.0006784605,0.000098562996,0.000058909645,0.00055639906,2.3951884e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0046511563,0.000111780064,0.56150234,0.0008550642,0.0006166169,0.0011911442,0.0068562706,0.00017967609,0.3793504,0.005927082,0.00007324971,0.03868523],"study_design_scores_gemma":[0.005876497,0.0017515986,0.91659015,0.00023047825,0.00009638476,0.0024633664,0.0025314798,0.003388812,0.019367216,0.047400452,0.000011871925,0.00029170062],"about_ca_topic_score_codex":0.000018387247,"about_ca_topic_score_gemma":0.000008734632,"teacher_disagreement_score":0.35998318,"about_ca_system_score_codex":0.000031287564,"about_ca_system_score_gemma":0.00014295382,"threshold_uncertainty_score":0.4744991},"labels":[],"label_agreement":null},{"id":"W3110836949","doi":"10.1016/j.jval.2020.08.885","title":"PIN44 Isavuconazole for the Treatment of Invasive Aspergillosis and Mucormycosis: A Canadian Cost-Utility Analysis","year":2020,"lang":"en","type":"article","venue":"Value in Health","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; Université de Montréal","funders":"","keywords":"Voriconazole; Medicine; Aspergillosis; Internal medicine; Case fatality rate; Population; Intensive care medicine; Mucormycosis; Economic evaluation; Emergency medicine; Surgery; Epidemiology; Antifungal; Environmental health; Immunology; Pathology","score_opus":0.09615228891756904,"score_gpt":0.3281833001406183,"score_spread":0.23203101122304925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3110836949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9717231,0.00534535,0.00015890856,0.020793142,0.000027529224,0.0015928608,0.0002368314,0.000009283219,0.00011299408],"genre_scores_gemma":[0.99372715,0.0037285653,0.0002281131,0.0021516227,0.00003513742,0.00007273142,0.000025655521,0.000007114184,0.000023899856],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988626,0.00008656967,0.0003691877,0.00027837208,0.00012817854,0.00027509648],"domain_scores_gemma":[0.9987563,0.0004431366,0.00008561846,0.00025724532,0.00007315228,0.00038452866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003375762,0.00010891143,0.00048729163,0.000096705175,0.00011327591,0.000006229706,0.00005466363,0.000051670733,0.00005111611],"category_scores_gemma":[0.00027577378,0.00007359357,0.00015711006,0.00049907237,0.000088912675,0.00002584344,0.000006824727,0.000066041175,0.0000015887254],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034743594,0.00015798547,0.9842095,0.0004204977,0.00032194162,0.000004427735,0.004038864,0.00014673344,0.000041234667,0.00019053764,0.00021470824,0.009906141],"study_design_scores_gemma":[0.0012227698,0.0011733348,0.97054017,0.0000608296,0.00037697592,8.0114177e-7,0.0020246997,0.019324265,0.00032805922,0.000066681096,0.0048062224,0.00007517467],"about_ca_topic_score_codex":0.33751798,"about_ca_topic_score_gemma":0.3400493,"teacher_disagreement_score":0.02200406,"about_ca_system_score_codex":0.00033708673,"about_ca_system_score_gemma":0.0009600843,"threshold_uncertainty_score":0.6719931},"labels":[],"label_agreement":null},{"id":"W3112274548","doi":"10.1007/s15010-020-01561-x","title":"A challenging complication following SARS-CoV-2 infection: a case of pulmonary mucormycosis","year":2020,"lang":"en","type":"article","venue":"Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":186,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Università degli Studi di Sassari","keywords":"Mucormycosis; Opportunistic infection; Medicine; Coronavirus; Complication; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Intensive care medicine; Disease; Immunology; Infectious disease (medical specialty); Viral disease; Internal medicine; Human immunodeficiency virus (HIV); Surgery","score_opus":0.06736362529003181,"score_gpt":0.3364128720750443,"score_spread":0.26904924678501246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112274548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98415536,0.00011261553,0.011350241,0.00055992143,0.00012236722,0.00029275997,0.0000020473303,0.00013890736,0.0032657643],"genre_scores_gemma":[0.99936014,0.00006839212,0.00009573231,0.00027872488,0.0001414629,0.000019242114,0.000012479501,0.000013677921,0.000010147421],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99921006,0.000037516063,0.00026292368,0.00023665903,0.00012801932,0.00012480411],"domain_scores_gemma":[0.9995402,0.00003641622,0.000093417955,0.0001780316,0.00009562094,0.000056310673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014572644,0.00010455003,0.00022964817,0.00007244101,0.00010665708,0.00000842397,0.000017536458,0.00008348526,0.000019639252],"category_scores_gemma":[0.00014930028,0.00010393135,0.00019485118,0.00035563452,0.00002777979,0.00015966746,0.000020028385,0.00015520219,0.0000307547],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018601652,0.00024806266,0.64023477,0.0004855184,0.00009441032,0.00032778172,0.00052739383,0.000020844947,0.33683246,0.00015214716,0.00015411549,0.020736493],"study_design_scores_gemma":[0.0014389777,0.0007723823,0.8413265,0.00036868363,0.00040915236,0.0018145728,0.00022017345,0.022223765,0.1277222,0.0002208926,0.0031219067,0.0003607914],"about_ca_topic_score_codex":0.0008555874,"about_ca_topic_score_gemma":0.00012087014,"teacher_disagreement_score":0.20911027,"about_ca_system_score_codex":0.000078653844,"about_ca_system_score_gemma":0.000030312012,"threshold_uncertainty_score":0.42381975},"labels":[],"label_agreement":null},{"id":"W3112865824","doi":"10.1101/2020.12.04.412718","title":"DeORFanizing <i>Candida albicans</i> Genes using Co-Expression","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Directorate for Biological Sciences; University of Toronto; University of Michigan","keywords":"Candida albicans; Corpus albicans; Gene; Biology; Open reading frame; Function (biology); Computational biology; Genome; Genetics; Model organism; Peptide sequence","score_opus":0.033540393488257034,"score_gpt":0.2751793142078161,"score_spread":0.24163892071955906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112865824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883998,0.003321201,0.0053151553,0.00036856346,0.0007097911,0.0010443409,0.00022829686,0.0005444562,0.000068388596],"genre_scores_gemma":[0.9847248,0.00050543365,0.012585959,0.0008770216,0.001045496,0.00004960942,0.0000014095017,0.00019904875,0.00001120448],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99598944,0.00016489452,0.00078576844,0.0015451664,0.0007736012,0.0007411328],"domain_scores_gemma":[0.99663204,0.000080599864,0.0004638572,0.0016102574,0.00051057787,0.0007026401],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005095743,0.00074282964,0.0011809403,0.00019068793,0.00028971213,0.00016622995,0.00043623155,0.0007377348,0.00019368004],"category_scores_gemma":[0.0003848326,0.000733574,0.00037275843,0.0004710309,0.00022521582,0.0001545599,0.0004766305,0.0013002892,0.000089636866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022528962,0.00012587727,0.09149552,0.0011268894,0.00013261079,0.00023939004,0.000012896739,0.000018446304,0.9059989,0.00005558955,0.000565621,0.0000029698506],"study_design_scores_gemma":[0.0010046202,0.00010289696,0.12710603,0.0019408027,0.00044852647,7.454602e-8,0.000014451545,0.00077178434,0.8579444,0.0000030043104,0.009694486,0.00096890854],"about_ca_topic_score_codex":0.00009678018,"about_ca_topic_score_gemma":0.0000031403133,"teacher_disagreement_score":0.048054475,"about_ca_system_score_codex":0.0005009852,"about_ca_system_score_gemma":0.0015010573,"threshold_uncertainty_score":0.99951154},"labels":[],"label_agreement":null},{"id":"W3112984291","doi":"10.1016/s1473-3099(20)30847-1","title":"Defining and managing COVID-19-associated pulmonary aspergillosis: the 2020 ECMM/ISHAM consensus criteria for research and clinical guidance","year":2020,"lang":"en","type":"review","venue":"The Lancet Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":953,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Voriconazole; Intensive care medicine; Pulmonary aspergillosis; Aspergillosis; Medicine; Aspergillus fumigatus; Immunology; Antifungal; Dermatology","score_opus":0.20312691579159486,"score_gpt":0.49748470949204804,"score_spread":0.2943577937004532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112984291","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013413982,0.98779356,0.000011651109,0.0061230403,0.00017718018,0.0021901547,0.0008018943,0.00020068756,0.0013604454],"genre_scores_gemma":[0.032014184,0.9640028,0.000020861886,0.0023061899,0.0009095489,0.00033794012,0.00015458501,0.00006604016,0.00018784933],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99583834,0.0014840657,0.0007999868,0.0008430265,0.00039832643,0.00063623267],"domain_scores_gemma":[0.9897409,0.008443709,0.00033755528,0.0007596809,0.00022265821,0.0004955014],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0031076695,0.00041009946,0.002146676,0.00006814661,0.00097643386,0.00017835018,0.00030623382,0.00025296642,0.0000338021],"category_scores_gemma":[0.01354064,0.00023460879,0.00044675756,0.00047794072,0.001222739,0.000041403753,0.00033305725,0.001015792,0.000016505497],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016422853,0.00065339217,0.22658317,0.0497462,0.0023752875,0.0006385103,0.00021348736,5.5234426e-7,9.5039786e-7,0.002697042,0.09989036,0.61555874],"study_design_scores_gemma":[0.0012743289,0.0005641219,0.022428585,0.0063752388,0.0029244537,0.00019256407,0.00024128989,0.00014668173,6.4285196e-8,0.0041873055,0.9612963,0.00036906952],"about_ca_topic_score_codex":0.00008333461,"about_ca_topic_score_gemma":0.00012743073,"teacher_disagreement_score":0.86140597,"about_ca_system_score_codex":0.00022632146,"about_ca_system_score_gemma":0.0008693324,"threshold_uncertainty_score":0.99476874},"labels":[],"label_agreement":null},{"id":"W3113498009","doi":"10.1101/2020.12.23.424276","title":"A heterogeneously expressed gene family modulates biofilm architecture and hypoxic growth of <i>Aspergillus fumigatus</i>","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Dartmouth College; Canadian Institute for Advanced Research; Burroughs Wellcome Fund; Cystic Fibrosis Foundation; National Institutes of Health; National Science Foundation","keywords":"Biofilm; Aspergillus fumigatus; Biology; Microbiology; Hypha; Quorum sensing; Gene; Virulence; Bacteria; Genetics","score_opus":0.015375954057200499,"score_gpt":0.21683264897222046,"score_spread":0.20145669491501997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3113498009","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98932326,0.0064848564,0.0013337338,0.0005040439,0.0002909129,0.0010586616,0.00068800023,0.00030398968,0.000012538828],"genre_scores_gemma":[0.98699737,0.0012923924,0.010451868,0.0006819225,0.00033409233,0.00007163046,0.0000021844571,0.00016394467,0.000004597792],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99623376,0.0001466096,0.0008329863,0.0015409244,0.00062373787,0.00062199426],"domain_scores_gemma":[0.9968181,0.000092349386,0.0004376877,0.0014478676,0.0005868482,0.0006171043],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00032115154,0.00079160003,0.0014371044,0.00024042187,0.00011387398,0.000077078774,0.00041198576,0.0007347005,0.000018755021],"category_scores_gemma":[0.0003784273,0.00074934715,0.00036886596,0.00046747757,0.00042173348,0.00007162214,0.00057630514,0.0010207499,0.000013598027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042011566,0.00017649184,0.021650253,0.0022260786,0.00034286402,0.00022368523,0.00003119213,0.000018228939,0.9747114,0.00006867346,0.00012567542,0.0000053477997],"study_design_scores_gemma":[0.0009819918,0.00023029988,0.1734051,0.00065394695,0.0003306431,1.3425328e-7,0.0000051593684,0.00020704811,0.82321155,0.000017584725,0.0003417058,0.00061481656],"about_ca_topic_score_codex":0.00008783664,"about_ca_topic_score_gemma":0.0000029805244,"teacher_disagreement_score":0.15175484,"about_ca_system_score_codex":0.00012816308,"about_ca_system_score_gemma":0.0006160692,"threshold_uncertainty_score":0.99949574},"labels":[],"label_agreement":null},{"id":"W3113903917","doi":"10.1038/s41467-020-20183-3","title":"An oxindole efflux inhibitor potentiates azoles and impairs virulence in the fungal pathogen Candida auris","year":2020,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Center for Advancing Translational Sciences; Canadian Institutes of Health Research; Centers for Disease Control and Prevention; U.S. Department of Health and Human Services; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Broad Institute; National Institute of General Medical Sciences; Canadian Institute for Advanced Research","keywords":"Candida auris; Fluconazole; Efflux; Microbiology; Azole; Pathogen; Fungal pathogen; Biology; Candida albicans; Corpus albicans; Virulence; Antifungal; Gene; Genetics","score_opus":0.02038064154639831,"score_gpt":0.31036746246774743,"score_spread":0.28998682092134914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3113903917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9720249,0.009838563,0.0000223962,0.016936298,0.000025111396,0.00036690326,0.00006431474,0.000044964057,0.0006765056],"genre_scores_gemma":[0.99490196,0.00091506424,0.0009011739,0.0030643304,0.00007585894,0.000023085307,0.00009581725,0.000010362811,0.0000123740665],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99901116,0.0002232323,0.00020039093,0.00021007538,0.0001955975,0.00015953108],"domain_scores_gemma":[0.99843895,0.00020743471,0.000050854367,0.0010988909,0.000083075145,0.000120767545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033817816,0.00011301236,0.00017482722,0.00003786547,0.00023030156,0.000039068338,0.0005215401,0.00017188577,0.000014263834],"category_scores_gemma":[0.00031599635,0.000079064965,0.000053277177,0.0003049343,0.00019613549,0.00012289443,0.00012297502,0.00095356716,0.000008291074],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013240692,0.0003137256,0.944077,0.00006267755,0.000023310924,0.000014348725,0.00438862,0.0000019419426,0.045455072,0.0011301044,0.002242462,0.0021583424],"study_design_scores_gemma":[0.000542773,0.00015361512,0.9893839,0.000058467707,0.000052651256,0.000013529515,0.0029975893,0.00069588906,0.0009980414,0.000102972466,0.004886123,0.000114449256],"about_ca_topic_score_codex":0.00007457926,"about_ca_topic_score_gemma":0.0013831015,"teacher_disagreement_score":0.04530691,"about_ca_system_score_codex":0.000030150819,"about_ca_system_score_gemma":0.00009293804,"threshold_uncertainty_score":0.41428277},"labels":[],"label_agreement":null},{"id":"W3115999108","doi":"10.2147/idr.s281288","title":"Aspergillus Species in Lower Respiratory Tract of Hospitalized Patients from Shanghai, China: Species Diversity and Emerging Azole Resistance","year":2020,"lang":"en","type":"article","venue":"Infection and Drug Resistance","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Huashan Hospital; National Natural Science Foundation of China","keywords":"Azole; Aspergillus flavus; Biology; Microbiology; Aspergillus; Multilocus sequence typing; Internal transcribed spacer; Aspergillus niger; Aspergillus fumigatus; Antifungal; Gene; Genetics; Biotechnology; Genotype; Phylogenetic tree","score_opus":0.016581051131322192,"score_gpt":0.23593001576783693,"score_spread":0.21934896463651474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3115999108","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99070024,0.0019868657,0.000060767474,0.0007693632,0.00012833394,0.00028283018,0.00005384113,0.000048242586,0.005969536],"genre_scores_gemma":[0.9970721,0.00077867025,0.00007893122,0.00033891806,0.00007744215,0.0000027421354,0.000010749393,0.00001404681,0.001626383],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99850434,0.00007995424,0.00039271818,0.00046629884,0.0003469737,0.00020969196],"domain_scores_gemma":[0.9992604,0.000077963705,0.00017189948,0.00021613117,0.00011408498,0.0001595215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018986239,0.00019937204,0.00046294145,0.00008793898,0.0002714493,0.00002084371,0.00006209055,0.00008758083,0.00013841149],"category_scores_gemma":[0.0003334336,0.00018964628,0.00009185295,0.00031377,0.0002517357,0.0002449555,0.00015036717,0.00022727613,0.000002769936],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013943701,0.00019247925,0.99293774,0.00023883862,0.000023502122,0.000022792572,0.0022578703,0.0000012017429,0.0015097567,0.00020735635,0.0010918152,0.00012229076],"study_design_scores_gemma":[0.0021528013,0.00007997352,0.9864423,0.00023663204,0.000036290443,1.288412e-7,0.0002508099,0.000008829917,0.00067699945,0.00021362209,0.009724728,0.00017687159],"about_ca_topic_score_codex":0.00019721425,"about_ca_topic_score_gemma":0.0018827108,"teacher_disagreement_score":0.008632913,"about_ca_system_score_codex":0.00009103842,"about_ca_system_score_gemma":0.000031751315,"threshold_uncertainty_score":0.77335507},"labels":[],"label_agreement":null},{"id":"W3116621216","doi":"10.1093/ofid/ofaa646","title":"Mucormycosis in Hematopoietic Cell Transplant Recipients and in Patients With Hematological Malignancies in the Era of New Antifungal Agents","year":2020,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Posaconazole; Medicine; Internal medicine; Mucormycosis; Hematopoietic stem cell transplantation; Azole; Echinocandin; Amphotericin B; Surgery; Salvage therapy; Transplantation; Gastroenterology; Fluconazole; Antifungal; Chemotherapy; Dermatology","score_opus":0.01642255842207498,"score_gpt":0.25316789582778204,"score_spread":0.23674533740570705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3116621216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973736,0.00023554031,0.00000890024,0.0005232919,0.000018006931,0.0010625133,0.00003977077,0.000009904732,0.00072848244],"genre_scores_gemma":[0.99897367,0.00009141495,0.000020323901,0.0008244067,0.0000044072085,0.00002963683,0.00003220566,0.000010727984,0.00001322997],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986803,0.00009012593,0.00037263607,0.0003229723,0.000266263,0.0002677336],"domain_scores_gemma":[0.99947625,0.00008126863,0.00008320746,0.00018793566,0.000030708172,0.00014061287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116400064,0.00016290271,0.00046273798,0.000055098313,0.00004043564,0.000033271135,0.00016904213,0.00006120356,0.00007749071],"category_scores_gemma":[0.000090311885,0.00010305845,0.000052544656,0.00040480917,0.00008922519,0.00016894312,0.00006944262,0.00019979036,0.000004393769],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016485606,0.0012626622,0.9951697,0.00018454176,0.000009994583,0.000078721736,0.0010031317,0.0000061773335,0.000026757089,0.000050203176,0.00029982516,0.00025973507],"study_design_scores_gemma":[0.004486163,0.0006571458,0.9934001,0.00045150862,0.00004129563,0.0000040675486,0.0005201798,0.000017122295,0.00014988382,0.00013687345,0.000018277586,0.000117412994],"about_ca_topic_score_codex":0.0004425548,"about_ca_topic_score_gemma":0.0010241824,"teacher_disagreement_score":0.0028376027,"about_ca_system_score_codex":0.000036350666,"about_ca_system_score_gemma":0.000110819994,"threshold_uncertainty_score":0.4202602},"labels":[],"label_agreement":null},{"id":"W3118387144","doi":"10.1128/aac.02031-20","title":"Evaluation of Synergistic Activity of Isavuconazole or Voriconazole plus Anidulafungin and the Occurrence and Genetic Characterization of Candida auris Detected in a Surveillance Program","year":2021,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"bioMérieux; Dr. Falk Pharma; Idorsia Pharmaceuticals; TenNor Therapeutics; Astellas Foundation for Research on Metabolic Disorders; Shionogi; Basilea Pharmaceutica; Astellas Pharma; Pfizer; Melinta Therapeutics; Entasis Therapeutics; Albany College of Pharmacy and Health Sciences; Achaogen; Amplyx; Roivant Sciences; Nabriva Therapeutics; BD; GenePOC; University of North Texas; Boston Pharmaceuticals; Novartis; Harvard University; F. Hoffmann-La Roche; Wockhardt; Allergan; Cidara Therapeutics; University of Southern California; GlaxoSmithKline; Bayer","keywords":"Anidulafungin; Voriconazole; Candida auris; Fluconazole; Biology; Microbiology; Etest; Multilocus sequence typing; Micafungin; Caspofungin; Genotype; Antimicrobial; Antifungal; Genetics; Gene","score_opus":0.02165654749862611,"score_gpt":0.2976502285050241,"score_spread":0.275993681006398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3118387144","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99891144,0.00018321423,0.00008172138,0.00019520154,0.000024336463,0.0005226719,0.000066725224,0.000004363241,0.000010327307],"genre_scores_gemma":[0.9977152,0.002056634,0.000083798,0.00007941472,0.000009824458,0.000007904843,0.00002286756,0.0000054920547,0.000018909097],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991604,0.00010588494,0.00025355598,0.00019222466,0.00018701772,0.00010088211],"domain_scores_gemma":[0.9993443,0.000060069895,0.0001658724,0.0001373996,0.000264488,0.000027907461],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034970997,0.000095697396,0.00034955158,0.00003350145,0.000026506154,0.000008321408,0.00003013893,0.000054337073,0.00003338953],"category_scores_gemma":[0.000103078506,0.000066608656,0.000027426664,0.00020437578,0.0002326648,0.000036790083,0.000019949595,0.00005712409,4.6365273e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014048199,0.000244638,0.3399915,0.00039081773,0.00006278833,0.0000032428638,0.0005358454,0.0000022994795,0.5923407,0.0000047485273,0.000011972304,0.065006636],"study_design_scores_gemma":[0.0041236496,0.00009902904,0.89250344,0.0001272863,0.000063575186,0.0000073411456,0.00003466029,0.0034710302,0.09948016,0.000008736508,0.0000219822,0.000059120306],"about_ca_topic_score_codex":0.00020109382,"about_ca_topic_score_gemma":0.000352472,"teacher_disagreement_score":0.55251193,"about_ca_system_score_codex":0.000019807863,"about_ca_system_score_gemma":0.00019595718,"threshold_uncertainty_score":0.2716222},"labels":[],"label_agreement":null},{"id":"W3119283002","doi":"10.3390/antibiotics10010081","title":"Back to Nature: Combating Candida albicans Biofilm, Phospholipase and Hemolysin Using Plant Essential Oils","year":2021,"lang":"en","type":"article","venue":"Antibiotics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Mansoura University; Zagazig University; Faculty of Science, Cairo University; Cairo University","keywords":"Hemolysin; Candida albicans; Microbiology; Biofilm; Phospholipase; Virulence; Corpus albicans; Eugenol; Chemistry; Biology; Pogostemon; Food science; Traditional medicine; Enzyme; Biochemistry; Bacteria; Medicine","score_opus":0.016037807408056017,"score_gpt":0.29795529635189016,"score_spread":0.28191748894383417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119283002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99606943,0.0006449046,0.00068354706,0.00070978457,0.00026538398,0.00017950217,0.00008965464,0.000022965552,0.0013347969],"genre_scores_gemma":[0.9871216,0.00013160637,0.009668791,0.0018191984,0.00016722818,7.502335e-8,0.00008400664,0.000025256122,0.0009822292],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985679,0.000040926698,0.00029548624,0.00044686167,0.0002718059,0.00037703512],"domain_scores_gemma":[0.99903005,0.00007452771,0.00006559135,0.00038840502,0.0001557202,0.00028572607],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015516176,0.00019168336,0.00039515455,0.00005420231,0.00015039819,0.000062855426,0.0000631164,0.00020267609,0.00030280984],"category_scores_gemma":[0.00023005114,0.0001771218,0.00008701051,0.00036052993,0.0001091881,0.000059627928,0.000101130674,0.00035319963,0.00003755099],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002635732,0.00028732553,0.20821348,0.0004098819,0.00012218644,0.000896233,0.00035956665,0.000010784428,0.7858585,0.00059483526,0.0019274441,0.0010562012],"study_design_scores_gemma":[0.0012820569,0.00014356423,0.041633908,0.0005181127,0.00023743407,0.00029166418,0.0006754202,0.0015165422,0.9512718,0.000028877676,0.0020363915,0.00036425493],"about_ca_topic_score_codex":0.000263937,"about_ca_topic_score_gemma":0.0004300825,"teacher_disagreement_score":0.16657957,"about_ca_system_score_codex":0.00006237714,"about_ca_system_score_gemma":0.00026216314,"threshold_uncertainty_score":0.72228175},"labels":[],"label_agreement":null},{"id":"W3119955330","doi":"10.1016/j.jaip.2020.12.064","title":"Biomarkers for the Diagnosis of Allergic Bronchopulmonary Aspergillosis in Cystic Fibrosis: A Systematic Review and Meta-Analysis","year":2021,"lang":"en","type":"review","venue":"The Journal of Allergy and Clinical Immunology In Practice","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of Victoria; University of British Columbia","funders":"","keywords":"Allergic bronchopulmonary aspergillosis; Medicine; Cystic fibrosis; Meta-analysis; Aspergillus fumigatus; Aspergillosis; Internal medicine; Pathology; Immunology; Immunoglobulin E; Gastroenterology; Antibody","score_opus":0.1070444044546905,"score_gpt":0.43453871727757293,"score_spread":0.32749431282288244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119955330","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000105003,0.99369353,0.000022451573,0.004620796,0.00007430442,0.0014356818,0.000017608632,0.0000020923217,0.000028547778],"genre_scores_gemma":[0.0005102226,0.9981377,0.00026415507,0.0007416318,0.000023328079,0.00019574883,0.000007222956,0.000020099276,0.00009988531],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9895106,0.0055426643,0.0040910984,0.00032715034,0.00028839774,0.00024006565],"domain_scores_gemma":[0.9524105,0.04278279,0.0035319845,0.0007853783,0.00041492993,0.00007437271],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.011733806,0.00036345818,0.008660519,0.000227274,0.00008238177,0.000015869753,0.00042768026,0.00045696777,0.00010940543],"category_scores_gemma":[0.017696349,0.00016445538,0.002822725,0.00084263325,0.00055492664,0.00015822395,0.00015592562,0.001374225,0.0000012081284],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011540895,0.00082042644,0.00017346023,0.1092174,0.88198715,0.0001136836,0.000092869064,0.000002378681,1.7381869e-7,0.00007219504,0.00019209692,0.0061740773],"study_design_scores_gemma":[0.0005374073,0.0006223352,0.0007372968,0.039554883,0.9392616,0.0004586526,0.00083953975,0.000006207755,1.05560346e-7,0.00002471539,0.017813845,0.00014340055],"about_ca_topic_score_codex":0.00007554309,"about_ca_topic_score_gemma":0.0001810215,"teacher_disagreement_score":0.06966251,"about_ca_system_score_codex":0.00006210997,"about_ca_system_score_gemma":0.0003290612,"threshold_uncertainty_score":0.990578},"labels":[],"label_agreement":null},{"id":"W3120511704","doi":"10.3389/fgeed.2020.606281","title":"CRISPR-Based Genetic Manipulation of Candida Species: Historical Perspectives and Current Approaches","year":2021,"lang":"en","type":"review","venue":"Frontiers in Genome Editing","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research","keywords":"CRISPR; Genome editing; Biology; Cas9; Computational biology; Antifungal drug; Genome; Model organism; Genetics; Candida albicans; Gene","score_opus":0.10862508530341884,"score_gpt":0.3198359863790741,"score_spread":0.21121090107565527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120511704","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00046253996,0.98984015,0.0076863826,0.000022658021,0.0011109908,0.0005692685,0.000022413724,0.000013772352,0.00027182806],"genre_scores_gemma":[0.0022886058,0.98793554,0.008098741,0.0000033814842,0.0012565542,0.000035805562,0.00013193898,0.000037728772,0.00021170857],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997985,0.00011057802,0.00071768754,0.0005924315,0.0003242946,0.00026997336],"domain_scores_gemma":[0.99905217,0.000088213616,0.00034697657,0.00031818685,0.00009208167,0.00010236367],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031022972,0.00029729801,0.0017836868,0.00031276268,0.000055545166,0.000015668747,0.00009385437,0.000204749,0.000034430897],"category_scores_gemma":[0.00034863435,0.00027048343,0.00031423682,0.00034650092,0.00012268759,0.0000356383,0.000044964065,0.00050080684,6.30434e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038533057,0.00034702514,0.040208228,0.058416083,0.00019772183,0.000080753525,0.0015030627,0.0000125081715,0.000003626207,0.00006544812,0.0028679322,0.89625907],"study_design_scores_gemma":[0.00060907577,0.00012541925,0.013531463,0.01440357,0.0010967175,0.000013914223,0.005440723,0.00029976742,0.0000018279784,0.000028469469,0.96396005,0.0004890261],"about_ca_topic_score_codex":0.000023224495,"about_ca_topic_score_gemma":0.000010441946,"teacher_disagreement_score":0.9610921,"about_ca_system_score_codex":0.0017530397,"about_ca_system_score_gemma":0.00045823777,"threshold_uncertainty_score":0.9999747},"labels":[],"label_agreement":null},{"id":"W3120974500","doi":"10.1111/tid.13568","title":"Targeted caspofungin prophylaxis for invasive aspergillosis in high‐risk liver transplant recipients, a single‐center experience","year":2021,"lang":"en","type":"article","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Université de Montréal","funders":"","keywords":"Medicine; Caspofungin; Cohort; Liver transplantation; Transplantation; Aspergillosis; Internal medicine; Retrospective cohort study; Incidence (geometry); Surgery; Antifungal; Immunology; Voriconazole","score_opus":0.015442920946491374,"score_gpt":0.2421899230880444,"score_spread":0.22674700214155302,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120974500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937106,0.0010880411,0.0012565044,0.00010593234,0.0003033455,0.0011524416,0.002085844,0.00011967822,0.00017763615],"genre_scores_gemma":[0.9959101,0.0021434382,0.00018462811,0.00033817283,0.000089454654,0.00028649118,0.0007909757,0.00004590358,0.00021080534],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99756765,0.0001559885,0.0005103093,0.00080054195,0.00037563004,0.00058989204],"domain_scores_gemma":[0.9984895,0.00024168973,0.00008926351,0.00047462079,0.00021865593,0.00048627137],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00015612053,0.00035176493,0.00052783155,0.00016496182,0.000165714,0.000034821092,0.00010549291,0.00015883365,0.00035927366],"category_scores_gemma":[0.00024770954,0.00031978,0.00036480904,0.00043618423,0.0001257293,0.00018015652,0.000012087231,0.00031116413,0.000028743605],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039518797,0.0023694509,0.9738138,0.000746832,0.0001172866,0.002430024,0.0027721068,0.000027292255,0.012600519,0.00007966393,0.000056302593,0.0010348528],"study_design_scores_gemma":[0.00559167,0.00078272494,0.9726253,0.0009850672,0.00045681364,0.00011869669,0.0001914913,0.00017145718,0.018232243,0.00014509085,0.00020418297,0.0004952772],"about_ca_topic_score_codex":0.00041820976,"about_ca_topic_score_gemma":0.0032021264,"teacher_disagreement_score":0.005631724,"about_ca_system_score_codex":0.00025733304,"about_ca_system_score_gemma":0.00035735776,"threshold_uncertainty_score":0.99992543},"labels":[],"label_agreement":null},{"id":"W3120978965","doi":"10.1093/mmy/myaa110","title":"CYP51A polymorphisms of<i>Aspergillus fumigatus</i>in lung transplant recipients: Prevalence, correlation with phenotype, and impact on outcomes","year":2021,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Public Health Ontario; University Health Network","funders":"","keywords":"Aspergillus fumigatus; Genotyping; Broth microdilution; Genotype; Aspergillus; Aspergillosis; Biology; Lung; Microbiology; Medicine; Immunology; Internal medicine; Antibiotics; Minimum inhibitory concentration; Gene; Genetics","score_opus":0.007554788825837017,"score_gpt":0.2801611669687001,"score_spread":0.27260637814286304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120978965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955033,0.00087004324,0.0003904034,0.0013480268,0.00016819246,0.0002310488,0.00002365242,0.000017334243,0.0014480017],"genre_scores_gemma":[0.9980719,0.0005007708,0.00014612699,0.00064538396,0.000034737943,0.000009481375,0.000037363974,0.000011645445,0.00054259517],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99842846,0.00013751345,0.00035095864,0.00033948716,0.00046785802,0.00027572096],"domain_scores_gemma":[0.9989539,0.00043655746,0.00006772737,0.00023370524,0.00007937814,0.00022873601],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003441495,0.00015346016,0.00053752225,0.000092500195,0.000032207827,0.0000030761,0.000061749226,0.00023577295,0.0013266272],"category_scores_gemma":[0.00050000893,0.00009720758,0.00007482334,0.0002505945,0.00027464985,0.000040528488,0.000018897414,0.00036254,0.000007939527],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016476732,0.0003728561,0.9936101,0.00014909504,0.00007105293,0.0005371188,0.00028662404,0.0000083961295,0.00059079815,0.00073222147,0.00009575494,0.001898343],"study_design_scores_gemma":[0.0023652993,0.0008315801,0.9952306,0.00046950398,0.00010513405,0.00009189115,0.00006086904,0.00038334,0.00022711056,0.00007626764,0.00006500309,0.000093408824],"about_ca_topic_score_codex":0.00007267186,"about_ca_topic_score_gemma":0.00022161781,"teacher_disagreement_score":0.0025685974,"about_ca_system_score_codex":0.000091137634,"about_ca_system_score_gemma":0.00039821854,"threshold_uncertainty_score":0.9995863},"labels":[],"label_agreement":null},{"id":"W3123093675","doi":"10.3390/jof7020081","title":"Colonisation and Transmission Dynamics of Candida auris among Chronic Respiratory Diseases Patients Hospitalised in a Chest Hospital, Delhi, India: A Comparative Analysis of Whole Genome Sequencing and Microsatellite Typing","year":2021,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":105,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"University Grants Commission","keywords":"Candida auris; Genotyping; Typing; Microsatellite; Whole genome sequencing; Biology; Multilocus sequence typing; Transmission (telecommunications); Genotype; Microbiology; Medicine; Genome; Genetics; Gene; Allele","score_opus":0.012295752108609927,"score_gpt":0.26377973670161264,"score_spread":0.2514839845930027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123093675","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98541456,0.014097995,0.00016848734,0.000043442433,0.000019496028,0.0001620454,0.000078557365,0.0000017752069,0.00001364702],"genre_scores_gemma":[0.99871725,0.00092825905,0.0002538189,0.000019775476,0.000014573047,0.0000011253899,0.00005025212,0.0000056924996,0.000009238196],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988413,0.00005892144,0.00061442255,0.00015400551,0.00020865518,0.00012269345],"domain_scores_gemma":[0.9988373,0.00008102586,0.0004891702,0.00010737009,0.00036757096,0.00011757782],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021780613,0.00010688974,0.0006306385,0.00027536525,0.00003713911,0.000013349804,0.000038380138,0.00007412134,0.0000131446095],"category_scores_gemma":[0.00006095457,0.00009291011,0.00012970406,0.000508453,0.00014005399,0.00016664773,0.000016845406,0.00015762581,5.9382817e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026896378,0.00018218257,0.96480465,0.00031714357,0.0003469154,0.00003737853,0.0031857458,0.00012620978,0.028995963,0.0000035637495,0.0000035244839,0.0017277305],"study_design_scores_gemma":[0.0013568139,0.00065390434,0.99153674,0.00048357228,0.00078812585,0.0000014641253,0.0013087352,0.0017723999,0.0019741147,0.000010600774,0.000033908094,0.00007964505],"about_ca_topic_score_codex":0.000054065662,"about_ca_topic_score_gemma":0.00036885779,"teacher_disagreement_score":0.02702185,"about_ca_system_score_codex":0.00038280088,"about_ca_system_score_gemma":0.0004016795,"threshold_uncertainty_score":0.37887642},"labels":[],"label_agreement":null},{"id":"W3123476692","doi":"10.1016/j.ajic.2021.01.013","title":"First reported outbreak of the emerging pathogen Candida auris in Canada","year":2021,"lang":"en","type":"article","venue":"American Journal of Infection Control","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"BC Centre for Disease Control; Public Health Agency of Canada; Vancouver Coastal Health; University of British Columbia","funders":"","keywords":"Candida auris; Outbreak; Medicine; Infection control; Transmission (telecommunications); Isolation (microbiology); Hygiene; Health care; Intensive care medicine; Microbiology; Virology; Antifungal; Biology; Pathology","score_opus":0.006067380615454954,"score_gpt":0.23482618499831295,"score_spread":0.228758804382858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123476692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964754,0.0001855,0.0005866437,0.002085568,0.00027434833,0.00008092031,0.000007188556,0.0000022299487,0.00030219858],"genre_scores_gemma":[0.99920887,0.00009648183,0.00003605363,0.00051478733,0.00007502657,0.0000014080554,6.486702e-7,0.000006456347,0.00006029729],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987252,0.00011870987,0.0006177907,0.00009569941,0.00030750627,0.00013509631],"domain_scores_gemma":[0.998439,0.000120810466,0.00070039363,0.00020140567,0.00045677653,0.000081607446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033728403,0.00007656283,0.00042703366,0.000055073517,0.00004528418,0.000004290049,0.00003931076,0.000017506229,0.000084297935],"category_scores_gemma":[0.0008207564,0.000052317977,0.00016628417,0.00042958537,0.000072272924,0.000043595515,0.000010157726,0.00023790488,2.6430388e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019452158,0.00004879377,0.98865753,0.00001840666,0.000109407505,0.00020188699,0.00009157847,0.00029316652,0.0042778114,0.0000035645005,0.0002289629,0.0058743656],"study_design_scores_gemma":[0.0011485775,0.00014248826,0.9942856,0.00014749664,0.00010324072,0.00032059764,0.000602478,0.00015526092,0.0010715525,0.0000095018395,0.0019649412,0.000048257625],"about_ca_topic_score_codex":0.57820606,"about_ca_topic_score_gemma":0.8734044,"teacher_disagreement_score":0.2951983,"about_ca_system_score_codex":0.0004293209,"about_ca_system_score_gemma":0.00273519,"threshold_uncertainty_score":0.48521098},"labels":[],"label_agreement":null},{"id":"W3123557566","doi":"10.1128/aac.02353-20","title":"Variability of Hydroxy-Itraconazole in Relation to Itraconazole Bloodstream Concentrations","year":2021,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Itraconazole; Medicine; Microbiology; Biology; Antifungal","score_opus":0.011510398394889064,"score_gpt":0.2745017327794625,"score_spread":0.26299133438457345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123557566","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939765,0.000026816993,0.00035458276,0.003387916,0.000052003048,0.0002724884,0.000028297422,0.000013611145,0.0018878146],"genre_scores_gemma":[0.9944739,0.00027856993,0.000937207,0.0037622652,0.00002793158,0.0000031580864,0.000046728393,0.000010570586,0.00045969075],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990377,0.00004269376,0.00033177368,0.00029848877,0.00011232482,0.00017702412],"domain_scores_gemma":[0.99947625,0.000049113238,0.000056354944,0.00022168904,0.00010659722,0.00008996248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001831946,0.00011209761,0.0002838271,0.000037258054,0.000044631488,0.000012950576,0.000038856757,0.00009471138,0.00036745018],"category_scores_gemma":[0.00006605855,0.00010803151,0.00007337491,0.00021822339,0.00006895935,0.00007163894,0.00001664622,0.00011411134,0.0000059451227],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018114802,0.0006677197,0.7826259,0.00007932089,0.000037251175,0.000014378373,0.0005889049,0.000009864035,0.21258654,0.00023271298,0.0012724452,0.0017038067],"study_design_scores_gemma":[0.0015542503,0.000058391448,0.90455025,0.00009870197,0.000025657459,0.000009427551,0.00010144819,0.00010873598,0.09055394,0.00012271115,0.0027161834,0.00010032074],"about_ca_topic_score_codex":0.000060991697,"about_ca_topic_score_gemma":0.000073382405,"teacher_disagreement_score":0.1220326,"about_ca_system_score_codex":0.00003685676,"about_ca_system_score_gemma":0.00013261377,"threshold_uncertainty_score":0.44053972},"labels":[],"label_agreement":null},{"id":"W3123587813","doi":"10.20944/preprints202008.0672.v1","title":"Diagnosis of Breakthrough Fungal Infections in the Clinical Mycology Laboratory: An ECMM Consensus Statement","year":2020,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Astellas Pharma; Amplyx; Cidara Therapeutics; Regeneron Pharmaceuticals; Gilead Sciences; Pfizer","keywords":"Medical mycology; Intensive care medicine; Serology; Medicine; Medical laboratory; Antifungal; Dermatology; Biology; Immunology; Pathology; Microbiology; Antibody","score_opus":0.26672372817226747,"score_gpt":0.4680748955330385,"score_spread":0.20135116736077102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123587813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98932993,0.00017024876,0.000022366243,0.0059913057,0.00053766277,0.001661389,0.00021951266,0.000083931125,0.0019836703],"genre_scores_gemma":[0.997019,0.0009932724,0.00017972669,0.001013325,0.0002653003,0.00035020732,0.00008947403,0.00003308201,0.0000566475],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9949882,0.0014442864,0.001563514,0.001144042,0.0004825284,0.0003774523],"domain_scores_gemma":[0.9960883,0.0009395726,0.0005421564,0.001797571,0.00040849086,0.00022388472],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0030933262,0.00035146775,0.0011055024,0.00011239712,0.00008134486,0.000011841787,0.00045411265,0.0005517439,0.00080817624],"category_scores_gemma":[0.0027661263,0.00028406418,0.00035186135,0.0003620889,0.0005770185,0.00004841812,0.00073548895,0.0020241195,0.00022436448],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005169921,0.0022404355,0.99293447,0.00047463228,0.00022839534,0.00016978219,0.0014187412,0.00004053603,0.0005957087,0.00031592496,0.00073732814,0.0003270396],"study_design_scores_gemma":[0.0011109818,0.0003807733,0.98844457,0.00020081112,0.00026276326,0.000010906835,0.0009477629,0.00003268691,0.0016409435,0.0009343534,0.005812354,0.00022107334],"about_ca_topic_score_codex":0.0007266908,"about_ca_topic_score_gemma":0.0011590888,"teacher_disagreement_score":0.0076890513,"about_ca_system_score_codex":0.00018494097,"about_ca_system_score_gemma":0.0011750463,"threshold_uncertainty_score":0.99996114},"labels":[],"label_agreement":null},{"id":"W3123705163","doi":"10.14740/jmc3637","title":"Rhinocerebral Mucormycosis and COVID-19 Pneumonia","year":2021,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":180,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Mucormycosis; Medicine; Diabetic ketoacidosis; Pneumonia; Hydroxychloroquine; Diabetes mellitus; Dermatology; Opportunistic infection; Surgery; Pediatrics; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19); Disease; Internal medicine; Immunology; Viral disease","score_opus":0.0463439314427239,"score_gpt":0.3604752723560368,"score_spread":0.3141313409133129,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123705163","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95815146,0.005310199,0.00043633167,0.0354838,0.0001606741,0.00003738331,0.0000052269784,0.000009255001,0.00040568755],"genre_scores_gemma":[0.9886524,0.0021184091,0.00036247977,0.008050829,0.0003766253,4.3239964e-7,0.0000024304218,0.0000072168186,0.00042915271],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980921,0.000084956904,0.00042769907,0.00013424947,0.0010965541,0.00016445441],"domain_scores_gemma":[0.99783707,0.0005250983,0.00013134847,0.00013738213,0.00021256374,0.0011565438],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00084080396,0.00009008353,0.0003805846,0.000055936278,0.000067099914,0.00002177455,0.00007609005,0.00013001164,0.0022981015],"category_scores_gemma":[0.012755427,0.000062441984,0.0001468714,0.00012944697,0.00017259657,0.00007909462,0.000050444363,0.00043057345,0.0000064207543],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010911276,0.00074944104,0.8097794,0.0008187314,0.0002290297,0.08544462,0.0004967815,8.7422075e-7,0.004131145,0.000750749,0.067662925,0.028845146],"study_design_scores_gemma":[0.008756545,0.0023253737,0.6796085,0.0011163866,0.0007115495,0.14278248,0.0055875205,0.0002769221,0.0039559924,0.0013947475,0.15309799,0.00038594607],"about_ca_topic_score_codex":0.000033848533,"about_ca_topic_score_gemma":0.000096981166,"teacher_disagreement_score":0.13017088,"about_ca_system_score_codex":0.00008122016,"about_ca_system_score_gemma":0.0016828487,"threshold_uncertainty_score":0.99861395},"labels":[],"label_agreement":null},{"id":"W3123981312","doi":"10.1002/cpz1.17","title":"Fluorescence Polarization‐Based Measurement of Protein‐Ligand Interaction in Fungal Cell Lysates","year":2021,"lang":"en","type":"article","venue":"Current Protocols","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Science Foundation","keywords":"Lysis; Computational biology; Fluorescence anisotropy; Antifungal; Ligand (biochemistry); Small molecule; Fluorescence; Protein–protein interaction; Biology; Chemistry; Combinatorial chemistry; Biochemistry; Microbiology; Receptor","score_opus":0.07075705008452875,"score_gpt":0.35494437521241207,"score_spread":0.2841873251278833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123981312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90745646,0.0005096379,0.002076728,0.0003162114,0.0001428068,0.088473424,0.000017048198,0.00005771227,0.0009499501],"genre_scores_gemma":[0.9833904,0.000003018324,0.0006137122,0.000017849754,0.000040582894,0.015799513,0.000020580626,0.000011119929,0.00010320738],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984346,0.00010896246,0.0004388411,0.00029649286,0.0005329261,0.00018816751],"domain_scores_gemma":[0.998852,0.000021732565,0.00014421731,0.00034195394,0.0005634058,0.00007665367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043097322,0.0001289851,0.00027392744,0.00008633193,0.000034004228,0.000019809238,0.00007344302,0.000059838043,0.00010035584],"category_scores_gemma":[0.00040757158,0.000115426985,0.000090130234,0.0003454002,0.00005060794,0.00011961302,0.00002971106,0.00024333056,0.000012287072],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004197811,0.0011280761,0.34729475,0.001799525,0.0000057736097,0.000010075742,0.00007057003,0.000004373379,0.64389265,0.00004510299,0.000055448192,0.005273864],"study_design_scores_gemma":[0.0017219108,0.00018325158,0.13462877,0.0027676416,0.000015165706,0.0000012369836,0.000076918695,0.00029612824,0.85850835,0.00004744226,0.0016499249,0.00010327552],"about_ca_topic_score_codex":0.000009304749,"about_ca_topic_score_gemma":0.000033852008,"teacher_disagreement_score":0.21461566,"about_ca_system_score_codex":0.00016771982,"about_ca_system_score_gemma":0.00059431186,"threshold_uncertainty_score":0.47069758},"labels":[],"label_agreement":null},{"id":"W3124384599","doi":"10.20944/preprints201703.0216.v1","title":"A Dysbiotic Mycobiome Dominated by &lt;em&gt;Candida albicans&lt;/em&gt; is Identified within Oral Squamous Cell Carcinomas","year":2017,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"University of Peradeniya","keywords":"Biology; Malassezia; Microbiology; Alternaria; Ascomycota; Candida albicans; Basidiomycota; Botany; Gene; Genetics","score_opus":0.05537154199914411,"score_gpt":0.32130339644067696,"score_spread":0.26593185444153283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3124384599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97875583,0.0015515222,0.000116034214,0.0005577322,0.0019751512,0.0029159428,0.0005412256,0.0004244693,0.013162116],"genre_scores_gemma":[0.9347282,0.00021969879,0.0001883667,0.0004460009,0.00033997372,0.00018626946,0.00069853826,0.00021544688,0.06297751],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9906653,0.00046278705,0.0019758479,0.0036415006,0.0017743658,0.0014801665],"domain_scores_gemma":[0.98977864,0.0002199871,0.001571246,0.0065193484,0.0009008781,0.0010098739],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"category_scores_codex":[0.0026077665,0.0014617946,0.0025506553,0.00045399836,0.00059151795,0.00025866032,0.0019886075,0.0016798237,0.0045359205],"category_scores_gemma":[0.0015071592,0.0014125134,0.0010690592,0.00035773756,0.0008070004,0.00028331665,0.0026521182,0.0027258364,0.003476009],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025860122,0.0015252955,0.62077147,0.0034709142,0.00061650464,0.0007267342,0.006652307,0.000017125136,0.35545635,0.000057568184,0.00762922,0.00049045816],"study_design_scores_gemma":[0.0058390778,0.00027043736,0.7496385,0.0010575065,0.0016141052,0.000064044485,0.0007086243,0.0004608434,0.23027244,0.0010497321,0.007028935,0.0019957277],"about_ca_topic_score_codex":0.001604469,"about_ca_topic_score_gemma":0.0012847697,"teacher_disagreement_score":0.12886702,"about_ca_system_score_codex":0.0009925738,"about_ca_system_score_gemma":0.0012906676,"threshold_uncertainty_score":0.99981314},"labels":[],"label_agreement":null},{"id":"W3124675279","doi":"10.1101/2021.01.13.21249761","title":"Invasive Mould Disease in Fatal COVID-19: A Systematic Review of Autopsies","year":2021,"lang":"en","type":"review","venue":"medRxiv","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Autopsy; Aspergillosis; Diabetes mellitus; Mechanical ventilation; Internal medicine; Surgery","score_opus":0.07652235274018919,"score_gpt":0.3933207934697362,"score_spread":0.316798440729547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3124675279","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008341274,0.9957429,0.000016407626,0.00021517709,0.00007959304,0.0035363254,0.0001283271,0.000030343874,0.00016752556],"genre_scores_gemma":[0.00021107505,0.9970682,0.00003212157,0.0009449241,0.000041302785,0.0003865641,0.00028997537,0.000038702714,0.0009870942],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9960358,0.0007633651,0.001748105,0.00058274536,0.00059241964,0.00027757633],"domain_scores_gemma":[0.99642754,0.00092246826,0.0006591356,0.0012925785,0.00016755381,0.00053075346],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012930827,0.00041954935,0.005847682,0.00019042476,0.000030552437,0.000010577374,0.0002795505,0.00019440391,0.00036920555],"category_scores_gemma":[0.028392699,0.000288096,0.0011394857,0.00075555034,0.00015205157,0.000048897942,0.00011655577,0.00045823635,0.00005276526],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009528161,0.00011814213,0.0017807479,0.9955252,0.00014804532,0.0010215506,0.000047021316,3.676293e-8,4.0021007e-7,0.000121235455,0.00031492746,0.0009131621],"study_design_scores_gemma":[0.0001642355,0.000028475866,0.00015372275,0.9387887,0.0040346957,0.000031689913,0.00004462485,6.593393e-7,7.2921955e-7,0.000011192679,0.056533154,0.00020813842],"about_ca_topic_score_codex":0.00002994284,"about_ca_topic_score_gemma":0.0000592763,"teacher_disagreement_score":0.05673652,"about_ca_system_score_codex":0.00034225115,"about_ca_system_score_gemma":0.0042396854,"threshold_uncertainty_score":0.99995714},"labels":[],"label_agreement":null},{"id":"W3126708702","doi":"10.1016/j.mmcr.2021.02.003","title":"Editorial MMCR special issue ‘Covid-19 associated pulmonary aspergillosis’","year":2021,"lang":"en","type":"editorial","venue":"Medical Mycology Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Medical Research Council","keywords":"Coronavirus disease 2019 (COVID-19); Medicine; Pulmonary aspergillosis; 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Aspergillosis; Virology; Pathology; Immunology; Infectious disease (medical specialty); Outbreak; Disease","score_opus":0.01206947258110908,"score_gpt":0.3256222306454011,"score_spread":0.313552758064292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3126708702","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.003364584,0.0011561052,0.000012034805,0.0023695687,0.9792123,0.000892814,0.00023235432,0.0002869089,0.012473346],"genre_scores_gemma":[0.004160987,0.0009827982,0.000038361595,0.0013207095,0.9754084,0.00012992448,0.0046620592,0.0001417172,0.013155085],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.98704994,0.0009531231,0.0024590727,0.0023664464,0.0058275717,0.0013438304],"domain_scores_gemma":[0.9877911,0.0044957735,0.0012042476,0.0017205741,0.0015395719,0.0032487311],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.005122294,0.00095211726,0.0030390087,0.00030623475,0.0005086118,0.00006226462,0.0002396537,0.010341325,0.035118323],"category_scores_gemma":[0.19287883,0.0008642006,0.0010081526,0.00067225116,0.0010151969,0.0001015081,0.0004731547,0.005819256,0.00022733015],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038736482,0.00072198664,0.0010860119,0.00036419978,0.0003505407,0.46969664,0.000051765055,1.6682647e-7,0.000020284106,0.0000021870403,0.5267749,0.00054400746],"study_design_scores_gemma":[0.0014512254,0.000379413,0.00015715491,0.00036704168,0.0010344493,0.05057012,0.00015600024,0.0000053248978,0.000011848582,0.00016241295,0.9450441,0.00066091865],"about_ca_topic_score_codex":0.0010483412,"about_ca_topic_score_gemma":0.0021844255,"teacher_disagreement_score":0.4191265,"about_ca_system_score_codex":0.0024433534,"about_ca_system_score_gemma":0.022481894,"threshold_uncertainty_score":0.9993809},"labels":[],"label_agreement":null},{"id":"W3126732384","doi":"10.3390/jof7020122","title":"Strategies for the Prevention of Invasive Fungal Infections after Lung Transplant","year":2021,"lang":"en","type":"review","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Observational study; Intensive care medicine; Epidemiology; Lung transplantation; Population; Randomized controlled trial; Aspergillosis; Transplantation; Regimen; Internal medicine; Immunology; Environmental health","score_opus":0.051079427093328765,"score_gpt":0.3701344278086915,"score_spread":0.31905500071536275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3126732384","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003858145,0.9940716,0.0041614613,0.0000454094,0.00037324367,0.00067381933,0.00008127575,0.0000034887964,0.0002038625],"genre_scores_gemma":[0.012293923,0.98653716,0.00020715217,0.00001770322,0.00041762207,0.000034919005,0.000019325447,0.000020259165,0.00045194768],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99832314,0.00012531156,0.0009686054,0.00013469989,0.0002966957,0.00015156383],"domain_scores_gemma":[0.99765915,0.0008023023,0.0007537574,0.00023675324,0.00047895027,0.00006910435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006086761,0.00019767028,0.0013798069,0.00012708124,0.00005518632,0.000028079172,0.00011199828,0.00019024014,0.00017294404],"category_scores_gemma":[0.0001374865,0.00010948594,0.0017730029,0.00019497602,0.0000626852,0.00012904641,0.000011944983,0.00049418205,0.0000014595412],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00094124,0.0010904947,0.0029055674,0.14201784,0.0061519453,0.00042030143,0.0008172372,0.000007756838,0.00012918118,0.0011873887,0.0062394463,0.8380916],"study_design_scores_gemma":[0.0013682622,0.0019950725,0.0029882386,0.13743263,0.026632996,0.0019774185,0.001421763,0.000009176619,0.00006341934,0.0002922926,0.825451,0.00036773452],"about_ca_topic_score_codex":0.0000029754167,"about_ca_topic_score_gemma":0.0000670868,"teacher_disagreement_score":0.83772385,"about_ca_system_score_codex":0.0000950337,"about_ca_system_score_gemma":0.0021971029,"threshold_uncertainty_score":0.44647068},"labels":[],"label_agreement":null},{"id":"W3127013644","doi":"10.1016/s0140-6736(21)00219-1","title":"Posaconazole versus voriconazole for primary treatment of invasive aspergillosis: a phase 3, randomised, controlled, non-inferiority trial","year":2021,"lang":"en","type":"article","venue":"The Lancet","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":276,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Juravinski Hospital","funders":"","keywords":"Medicine; Voriconazole; Posaconazole; Aspergillosis; Clinical endpoint; Population; Internal medicine; Randomized controlled trial; Surgery; Immunology","score_opus":0.052319894972424986,"score_gpt":0.34702942596712927,"score_spread":0.29470953099470426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3127013644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9862578,0.0018105626,0.00022585856,0.0020652167,0.0005085453,0.0034157785,0.00019423635,0.000027015933,0.0054950207],"genre_scores_gemma":[0.9957217,0.00090873276,0.00033989665,0.0004122644,0.0012384483,0.00044021363,0.000111394715,0.000015394442,0.00081196515],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9986497,0.000111159,0.00044027425,0.00027244602,0.00023200587,0.00029438394],"domain_scores_gemma":[0.9975725,0.0012560494,0.0001685667,0.0006510255,0.0002620361,0.00008982305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004107577,0.00018515576,0.0015187064,0.00002423867,0.000102241305,0.000016473896,0.000112053975,0.000083365485,0.0001225898],"category_scores_gemma":[0.00079085445,0.000111025576,0.000549974,0.0001138472,0.00010881866,0.00004868847,0.00002346008,0.000088138455,0.000009934388],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9643956,0.0016176626,0.0018756266,0.00016377505,0.0007584241,0.000032684915,0.00031854713,0.0000015913179,0.025505112,0.00017292464,0.0012524035,0.0039056859],"study_design_scores_gemma":[0.957737,0.0032595093,0.004224734,0.00004893577,0.00089507265,0.0000045287698,0.00032910414,0.00006708539,0.030553984,0.00012542674,0.0026387724,0.00011582956],"about_ca_topic_score_codex":0.000028616441,"about_ca_topic_score_gemma":0.00008212602,"teacher_disagreement_score":0.009463924,"about_ca_system_score_codex":0.00014887954,"about_ca_system_score_gemma":0.00056697556,"threshold_uncertainty_score":0.45274913},"labels":[],"label_agreement":null},{"id":"W3127939817","doi":"10.1128/iai.00035-21","title":"Evaluating the Role of STAT3 in CD4 <sup>+</sup> T Cells in Susceptibility to Invasive Aspergillosis","year":2021,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Public Health Ontario; University of Toronto; University Health Network","funders":"University Health Network","keywords":"Aspergillus fumigatus; Biology; Bronchoalveolar lavage; Aspergillosis; Immune system; Immunology; Immunosuppression; Cytokine; Interferon gamma; Tumor necrosis factor alpha; Context (archaeology); Lung; Microbiology; Internal medicine; Medicine","score_opus":0.03479875828311784,"score_gpt":0.33560445057828436,"score_spread":0.3008056922951665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3127939817","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972184,0.0002384872,0.000016541328,0.00016892952,0.000035814133,0.00034642158,0.000008407455,0.00001153217,0.0019555178],"genre_scores_gemma":[0.99924004,0.0002339404,0.00011876155,0.00022023532,0.000015415306,0.000014215764,0.000009394571,0.0000069010193,0.00014111884],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985293,0.0005070653,0.00036852717,0.00022529156,0.00019297571,0.000176798],"domain_scores_gemma":[0.9988849,0.0003524821,0.000057527694,0.00041073246,0.00023015843,0.00006415827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013089374,0.00010703462,0.00027805867,0.00009489895,0.000089071844,0.000014547285,0.000046110246,0.000078945915,0.00023456945],"category_scores_gemma":[0.001585335,0.000084661675,0.00006992169,0.0005550373,0.00009809446,0.00008930126,0.00009080781,0.00037368803,0.000009367194],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020724139,0.00029949017,0.80519754,0.00008361046,0.0000127568765,0.000002994659,0.002343248,0.00027144613,0.18212587,0.0000390984,0.000009183238,0.009407535],"study_design_scores_gemma":[0.00064462965,0.00035004833,0.89851344,0.00013549188,0.000018540963,0.0000039069705,0.0043438375,0.0007896198,0.09461273,0.00036061957,0.00015222278,0.00007490251],"about_ca_topic_score_codex":0.0053973724,"about_ca_topic_score_gemma":0.010660422,"teacher_disagreement_score":0.09331592,"about_ca_system_score_codex":0.00013647483,"about_ca_system_score_gemma":0.00022464496,"threshold_uncertainty_score":0.8159249},"labels":[],"label_agreement":null},{"id":"W3128530449","doi":"10.3390/jof7020124","title":"Post-Translational Modifications Drive Success and Failure of Fungal–Host Interactions","year":2021,"lang":"en","type":"review","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Banting Research Foundation; University of Guelph","keywords":"Biology; Glycosylation; Aspergillus nidulans; Computational biology; Cryptococcus neoformans; Host (biology); Antifungal; Acetylation; Function (biology); Adaptation (eye); Fungal Diversity; Microbiology; Cell biology; Genetics; Gene; Ecology; Neuroscience; Mutant","score_opus":0.041791741800170264,"score_gpt":0.36676580811656295,"score_spread":0.3249740663163927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3128530449","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008257091,0.9970026,0.00038652765,0.00053734763,0.00020294072,0.0002508086,0.00023144766,0.0000046236237,0.00055800786],"genre_scores_gemma":[0.011860245,0.98553395,0.0014697798,0.000030979874,0.00028983539,0.0000040059986,0.000080121936,0.000022320097,0.0007087379],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980186,0.00011970302,0.0011289609,0.00019591577,0.00040106082,0.00013576391],"domain_scores_gemma":[0.99696004,0.00047151325,0.0009170314,0.0002685642,0.0012164669,0.0001663892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030742618,0.00021553974,0.0015241681,0.00029644015,0.000067189765,0.000026412463,0.00012813519,0.00018050782,0.00037290907],"category_scores_gemma":[0.00025989895,0.00016101284,0.0007788255,0.00029443225,0.000100774414,0.00019046162,0.000023660286,0.000767526,0.0000061183646],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023183625,0.0011148015,0.007859402,0.03065121,0.0031767471,0.00036400018,0.00077558856,0.0000027848318,0.0015160119,0.0025899168,0.005154029,0.94656366],"study_design_scores_gemma":[0.0005323786,0.00026497975,0.009649487,0.027021945,0.004308486,0.0020242494,0.0004944693,0.00000829124,0.00004237365,0.000035627698,0.9553654,0.00025228184],"about_ca_topic_score_codex":0.000006693952,"about_ca_topic_score_gemma":0.000052475865,"teacher_disagreement_score":0.9502114,"about_ca_system_score_codex":0.00007474312,"about_ca_system_score_gemma":0.00108178,"threshold_uncertainty_score":0.6565913},"labels":[],"label_agreement":null},{"id":"W3129541328","doi":"10.1016/s1473-3099(20)30784-2","title":"Global guideline for the diagnosis and management of rare mould infections: an initiative of the European Confederation of Medical Mycology in cooperation with the International Society for Human and Animal Mycology and the American Society for Microbiology","year":2021,"lang":"en","type":"review","venue":"The Lancet Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":432,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Medical Research Council","keywords":"Scedosporium apiospermum; Guideline; Paecilomyces; Medical mycology; Mucorales; Intensive care medicine; Mycology; Mucormycosis; Multidisciplinary approach; Antifungal; Medicine; Voriconazole; Biology; Dermatology; Pathology; Microbiology; Political science; Ecology","score_opus":0.06204144077870561,"score_gpt":0.3943815684241229,"score_spread":0.3323401276454173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3129541328","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22179314,0.7329108,0.0062132813,0.02005687,0.00023097254,0.015000468,0.0035610374,0.000036747995,0.00019665684],"genre_scores_gemma":[0.366936,0.6300434,0.000088236,0.0014498924,0.0002062363,0.0009796111,0.00027609253,0.000013596423,0.00000696896],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99860424,0.00043052164,0.00047266102,0.0002466365,0.00011070469,0.00013523085],"domain_scores_gemma":[0.9970722,0.0018092493,0.0005237402,0.00023842452,0.00033190547,0.00002447316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013618685,0.00016899004,0.0008439627,0.0000144081405,0.00030862138,0.000023947554,0.0001828427,0.00008153066,0.0000054207653],"category_scores_gemma":[0.0003687231,0.000067381996,0.0003168914,0.00012575767,0.0016856531,0.000031581487,0.000141571,0.00014541742,1.6424282e-8],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006523309,0.0037169806,0.2574577,0.041451637,0.022755275,0.000006525145,0.004364678,0.00012304503,0.00021848055,0.18535721,0.0736053,0.40441987],"study_design_scores_gemma":[0.04044758,0.010777781,0.29573256,0.010322855,0.029027848,0.00034235732,0.015902871,0.0028585591,0.000053369742,0.0031346423,0.59033465,0.0010649547],"about_ca_topic_score_codex":0.00010770548,"about_ca_topic_score_gemma":0.0016000839,"teacher_disagreement_score":0.51672935,"about_ca_system_score_codex":0.000057357065,"about_ca_system_score_gemma":0.00021094304,"threshold_uncertainty_score":0.62108594},"labels":[],"label_agreement":null},{"id":"W3129751630","doi":"10.1093/femsyr/foab013","title":"A <i>lacZ</i> reporter with high activity in the human fungal pathogen <i>Candida albicans</i>","year":2021,"lang":"en","type":"article","venue":"FEMS Yeast Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Reporter gene; Biology; Candida albicans; lac operon; Bioreporter; Gene; Gene expression; Beta-galactosidase; Molecular biology; Microbiology; Genetics","score_opus":0.06030598171862511,"score_gpt":0.36337368570166706,"score_spread":0.30306770398304195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3129751630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9699809,0.00014527627,0.000030360789,0.0029003313,0.00003279621,0.0005166903,0.000029145724,0.000023285655,0.02634119],"genre_scores_gemma":[0.9913137,0.000025101732,0.00006110648,0.00038242032,0.0002234189,0.000085615415,0.000043828008,0.000024537429,0.007840254],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99647075,0.0005799985,0.00025279156,0.0005891238,0.0014448686,0.0006624699],"domain_scores_gemma":[0.9981272,0.00017731772,0.00004932143,0.0010661739,0.00041168925,0.00016830265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024308115,0.0001570901,0.00033253263,0.000102511156,0.0002636191,0.00008622714,0.00020973764,0.00011192218,0.00045155213],"category_scores_gemma":[0.000268643,0.000097408345,0.00009112985,0.0009364666,0.00034209018,0.00010326436,0.000106005245,0.0010067602,0.00004602934],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010457931,0.001029281,0.6950562,0.0001907009,0.00006229272,0.008726185,0.0010912967,8.5232904e-7,0.28133863,0.0005964807,0.007326668,0.003535654],"study_design_scores_gemma":[0.0013959828,0.00040056687,0.9696571,0.00017033808,0.000025637999,0.00035052717,0.001674621,0.000008549927,0.01117396,0.0002930147,0.014690967,0.00015869964],"about_ca_topic_score_codex":0.0010393788,"about_ca_topic_score_gemma":0.005369672,"teacher_disagreement_score":0.27460095,"about_ca_system_score_codex":0.0001551893,"about_ca_system_score_gemma":0.00071775255,"threshold_uncertainty_score":0.4944179},"labels":[],"label_agreement":null},{"id":"W3130607038","doi":"10.1093/genetics/iyab029","title":"Clade-specific chromosomal rearrangements and loss of subtelomeric adhesins in <i>Candida auris</i>","year":2021,"lang":"en","type":"article","venue":"Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Broad Institute; Canadian Institute for Advanced Research; U.S. Department of Health and Human Services","keywords":"Biology; Genetics; Subtelomere; Clade; Candida auris; Bacterial adhesin; Gene; Microbiology; Virulence; Chromosome; Phylogenetics","score_opus":0.01775717492219829,"score_gpt":0.2646733195257171,"score_spread":0.2469161446035188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3130607038","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99223906,0.0060717454,0.000031654305,0.00019469415,0.000067453024,0.00012866137,0.000015184355,0.000008109915,0.0012434411],"genre_scores_gemma":[0.9942192,0.0041671316,0.0009447178,0.00012016707,0.00005751124,0.0000029044563,0.00001826795,0.0000121025605,0.00045798637],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990659,0.00003565528,0.0002597921,0.00024213895,0.00020632862,0.00019018339],"domain_scores_gemma":[0.9994619,0.000027103943,0.00004666871,0.00029827448,0.000084935695,0.00008114871],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000075796044,0.000094585266,0.0002620961,0.00004400014,0.00002287659,0.0000071291543,0.00004236356,0.0000723087,0.00013742856],"category_scores_gemma":[0.00003129846,0.00009233105,0.000044295404,0.00025583297,0.00013553692,0.000018706873,0.00004261708,0.00010653251,0.000008633538],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001069813,0.00015384663,0.818281,0.00015802254,0.000017629289,0.00017457273,0.00024956575,0.0000017296122,0.17733595,0.000026651594,0.00058570027,0.0029083733],"study_design_scores_gemma":[0.0010321888,0.00012884339,0.9313525,0.000090109716,0.000024054607,0.000023246348,0.00028387146,0.00001625821,0.058983505,0.000078601915,0.007900965,0.00008587053],"about_ca_topic_score_codex":0.000009294484,"about_ca_topic_score_gemma":0.00015393845,"teacher_disagreement_score":0.118352436,"about_ca_system_score_codex":0.000034386972,"about_ca_system_score_gemma":0.000106682324,"threshold_uncertainty_score":0.3765151},"labels":[],"label_agreement":null},{"id":"W3130860671","doi":"10.1093/genetics/iyab003","title":"Comprehensive genetic analysis of adhesin proteins and their role in virulence of<i>Candida albicans</i>","year":2021,"lang":"en","type":"article","venue":"Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; University of Guelph; Canadian Institutes of Health Research; John S. Dunn Foundation; Welch Foundation","keywords":"Virulence; Biology; Bacterial adhesin; Candida albicans; Genetics; Microbiology; Genetic analysis; Fungal protein; Gene; Saccharomyces cerevisiae","score_opus":0.013435823473601482,"score_gpt":0.25801864263195046,"score_spread":0.24458281915834898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3130860671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912003,0.007912424,0.00036481587,0.00006264637,0.000010163165,0.00018010644,0.000042189404,0.0000039174,0.0002234195],"genre_scores_gemma":[0.9955074,0.0011164661,0.0031825772,0.000093789546,0.000010340098,0.0000047239078,0.000011635468,0.0000070467254,0.00006599881],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999117,0.00004470366,0.00031740865,0.00023042706,0.00015094543,0.00013951503],"domain_scores_gemma":[0.9992242,0.000067824,0.00008120832,0.00036186966,0.00020205854,0.0000628563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006384616,0.00009826263,0.00046988594,0.00010892416,0.000014740412,0.0000035202065,0.000053045424,0.00006216176,0.00006352489],"category_scores_gemma":[0.00004669104,0.000084324034,0.000100959216,0.00066349754,0.00016694062,0.000010264328,0.000045861278,0.000080461934,6.6006714e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005770896,0.00010035069,0.56991357,0.00013127965,0.00018122405,0.000012338671,0.00049380166,0.00012283544,0.42405006,0.000013497553,0.0000053551485,0.0049179797],"study_design_scores_gemma":[0.0003267266,0.000111250214,0.8399818,0.000056558543,0.00026136375,0.0000029138184,0.0009281405,0.0011745257,0.15669875,0.000102022466,0.00029252717,0.00006340176],"about_ca_topic_score_codex":0.00009049635,"about_ca_topic_score_gemma":0.000989231,"teacher_disagreement_score":0.27006823,"about_ca_system_score_codex":0.00001667345,"about_ca_system_score_gemma":0.00014027004,"threshold_uncertainty_score":0.34386343},"labels":[],"label_agreement":null},{"id":"W3132483202","doi":"10.1016/j.celrep.2021.108781","title":"Functional connections between cell cycle and proteostasis in the regulation of Candida albicans morphogenesis","year":2021,"lang":"en","type":"review","venue":"Cell Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Institute of Infection and Immunity; Canadian Institutes of Health Research; National Institutes of Health; Canada Research Chairs; Canadian Institute for Advanced Research","keywords":"Proteostasis; Biology; Cell biology; Morphogenesis; Candida albicans; Transcription factor; Cell cycle; Corpus albicans; HSF1; Heat shock protein; Cell; Genetics; Gene","score_opus":0.047433359183077006,"score_gpt":0.30658283116915575,"score_spread":0.25914947198607874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3132483202","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.039865475,0.9556247,0.00004357696,0.000046632464,0.00009192331,0.0012919673,0.0000346584,0.000011331737,0.0029897096],"genre_scores_gemma":[0.14742847,0.84937733,0.00009074246,0.000017687664,0.000146208,0.00012353738,0.00054171117,0.000028448732,0.0022458816],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99805444,0.00013419578,0.00083669205,0.00045893228,0.00034984027,0.00016591449],"domain_scores_gemma":[0.99845284,0.00023326324,0.0005132882,0.00059904595,0.00012924238,0.00007231941],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065279886,0.00021381205,0.0010831082,0.00012033029,0.00008224414,0.00001438037,0.0000420044,0.00022518232,0.0002635671],"category_scores_gemma":[0.00015689424,0.00014814205,0.00030429152,0.0004257453,0.000099650744,0.000033774068,0.000030838353,0.00026614056,0.0000023030707],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007473493,0.0012430978,0.24181406,0.08618221,0.0005212903,0.0017225181,0.0007265819,0.000014782235,0.0008134329,0.000076457996,0.007510072,0.65930074],"study_design_scores_gemma":[0.00040142314,0.00015062673,0.12945043,0.006614712,0.0032327245,0.00061681005,0.0004980469,0.0000029884434,0.00059559627,0.00010218154,0.857908,0.00042643226],"about_ca_topic_score_codex":0.0002898048,"about_ca_topic_score_gemma":0.00012601817,"teacher_disagreement_score":0.85039794,"about_ca_system_score_codex":0.00010327902,"about_ca_system_score_gemma":0.0006937243,"threshold_uncertainty_score":0.6041058},"labels":[],"label_agreement":null},{"id":"W3132756055","doi":"10.1128/msphere.01250-20","title":"Aspergillus fumigatus Strain-Specific Conidia Lung Persistence Causes an Allergic Broncho-Pulmonary Aspergillosis-Like Disease Phenotype","year":2021,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Dartmouth College; National Institute of General Medical Sciences; Canadian Institute for Advanced Research; Memorial Sloan-Kettering Cancer Center; Cystic Fibrosis Foundation; National Cancer Institute; National Institutes of Health; National Science Foundation","keywords":"Allergic bronchopulmonary aspergillosis; Aspergillus fumigatus; Cystic fibrosis; Aspergillus; Aspergillosis; Pulmonary aspergillosis; Lung; Immunology; Medicine; Disease; Phenotype; Fungus; Microbiology; Lung disease; Biology; Pathology; Immunoglobulin E; Antibody; Internal medicine","score_opus":0.03244788078379739,"score_gpt":0.26873273721059465,"score_spread":0.23628485642679725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3132756055","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.942489,0.035920016,0.000059875314,0.00089993485,0.0005201797,0.0004144372,0.00016923735,0.00021560039,0.019311665],"genre_scores_gemma":[0.9847337,0.002104663,0.0005325505,0.0011370805,0.0004093898,0.000022960117,0.00032077578,0.000074589174,0.010664264],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99683535,0.00017249545,0.00047279577,0.0011028403,0.0007079466,0.000708547],"domain_scores_gemma":[0.99712235,0.00009380918,0.00009881031,0.0013147861,0.00041503887,0.0009552193],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018079935,0.000433231,0.0005972015,0.000037537895,0.00032884645,0.00009101346,0.00024933857,0.0002017835,0.007130248],"category_scores_gemma":[0.00012405004,0.0004043419,0.00037233703,0.00038998216,0.00032924043,0.00030704826,0.00010701173,0.00046519778,0.0002496894],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004090518,0.0037924326,0.7853751,0.0017224203,0.0007651571,0.018038161,0.0019984865,0.00017840395,0.13604705,0.0036878535,0.016193088,0.028111288],"study_design_scores_gemma":[0.0013356616,0.0002224091,0.94766885,0.00042288075,0.00030403453,0.00009033221,0.004758972,0.0005752651,0.0008656843,0.00021445275,0.042842474,0.0006989713],"about_ca_topic_score_codex":0.00004239398,"about_ca_topic_score_gemma":0.00040459208,"teacher_disagreement_score":0.16229373,"about_ca_system_score_codex":0.00029383754,"about_ca_system_score_gemma":0.00068028347,"threshold_uncertainty_score":0.99984086},"labels":[],"label_agreement":null},{"id":"W3132756805","doi":"10.1080/1040841x.2021.1884641","title":"<i>Candida albicans</i>targets that potentially synergize with fluconazole","year":2021,"lang":"en","type":"review","venue":"Critical Reviews in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Science and Technology Commission of Shanghai Municipality","keywords":"Fluconazole; Candida albicans; Corpus albicans; Antifungal; Microbiology; Biology; Drug; Pharmacology","score_opus":0.05446549971405292,"score_gpt":0.37271909132289704,"score_spread":0.31825359160884414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3132756805","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000011027555,0.99518746,0.0004239694,0.00030978955,0.00035177046,0.0015748531,0.0001477345,0.000033427215,0.0019599462],"genre_scores_gemma":[0.000070561844,0.99364203,0.0022323872,0.0012927254,0.00018967118,0.00021666162,0.0010354952,0.00007876833,0.0012416921],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99500066,0.0011333615,0.0014606008,0.0013094927,0.00014087923,0.0009549862],"domain_scores_gemma":[0.99732333,0.00086118886,0.00022066038,0.0011045024,0.00018105445,0.00030927028],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010578341,0.00079473405,0.006529777,0.00017039724,0.00008146578,0.000032831264,0.00036645477,0.000842125,0.001983553],"category_scores_gemma":[0.0020120463,0.0005102591,0.0011087768,0.00047754706,0.0008784546,0.00006020402,0.000178726,0.0014254483,0.00036912135],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007962375,0.0004831713,0.00021250831,0.06408354,0.00021630192,0.00179492,0.000020687252,2.4404597e-8,0.0003637446,0.001644269,0.0068251435,0.92427605],"study_design_scores_gemma":[0.00038855805,0.00017328997,0.000015407142,0.053943753,0.0012720249,0.0010877114,0.000016616961,1.0891476e-7,0.0000125697925,0.000025314856,0.94259703,0.00046762847],"about_ca_topic_score_codex":0.00001563365,"about_ca_topic_score_gemma":0.00012877164,"teacher_disagreement_score":0.9357719,"about_ca_system_score_codex":0.00027809088,"about_ca_system_score_gemma":0.0010310408,"threshold_uncertainty_score":0.9997349},"labels":[],"label_agreement":null},{"id":"W3134842310","doi":"10.21203/rs.3.rs-279551/v1","title":"The network interplay of type 1 interferon and toll-like receptor signaling cascades hallmarks the immune response against Candida spp. infections","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Natural Sciences and Engineering Research Council of Canada; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Toll-like receptor; Immune system; Interferon; Biology; Toll; Immunology; Signal transduction; Innate immune system; Receptor; Interferon type I; Microbiology; Cell biology; Genetics","score_opus":0.03526304579492582,"score_gpt":0.3767518247199809,"score_spread":0.3414887789250551,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3134842310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9707828,0.024081474,0.00009272476,0.0024662549,0.0006084793,0.001161859,0.00003375991,0.00003109251,0.0007415118],"genre_scores_gemma":[0.9885159,0.00808015,0.00008887339,0.000054511802,0.00032112858,0.00008776166,0.00009242985,0.00004125414,0.0027179488],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9950637,0.0022420266,0.0006269611,0.0005768066,0.00084692414,0.00064357335],"domain_scores_gemma":[0.9932115,0.0039012604,0.00016665467,0.0012864174,0.0012539163,0.00018023654],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.006965356,0.00027454962,0.00057991553,0.0001138853,0.00078170846,0.00022880432,0.00039237997,0.0003670415,0.00021799476],"category_scores_gemma":[0.0039679445,0.00016242174,0.00026710198,0.0005669753,0.0008801982,0.00005421576,0.001258704,0.0028737488,0.000012129023],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.12775162,0.0020242515,0.4346821,0.013198967,0.00540167,0.0007770772,0.028878076,0.00275231,0.2310663,0.00085319765,0.095398955,0.057215452],"study_design_scores_gemma":[0.004365228,0.010125212,0.67306685,0.05360044,0.0006923678,0.00014880505,0.092340656,0.0050681895,0.025319476,0.0011296842,0.13214223,0.0020008828],"about_ca_topic_score_codex":0.0008597445,"about_ca_topic_score_gemma":0.0020293614,"teacher_disagreement_score":0.23838472,"about_ca_system_score_codex":0.00037327933,"about_ca_system_score_gemma":0.0013343345,"threshold_uncertainty_score":0.99942666},"labels":[],"label_agreement":null},{"id":"W3135672483","doi":"10.1128/aac.02546-20","title":"Potency of Olorofim (F901318) Compared to Contemporary Antifungal Agents against Clinical Aspergillus fumigatus Isolates and Review of Azole Resistance Phenotype and Genotype Epidemiology in China","year":2021,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"China Postdoctoral Science Foundation; National Natural Science Foundation of China","keywords":"Aspergillus fumigatus; Azole; Aspergillosis; Biology; Potency; Aspergillus; Genotype; Antifungal; Microbiology; Drug resistance; Immunology; Gene; In vitro; Genetics","score_opus":0.04882297059252785,"score_gpt":0.3507032099207705,"score_spread":0.3018802393282426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3135672483","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97093135,0.023422468,0.000031487623,0.00409649,0.000097104356,0.00047765297,0.00005593,0.000010958092,0.00087657984],"genre_scores_gemma":[0.86445093,0.12213631,0.0009807185,0.012015767,0.000039815815,0.0000020341547,0.000051846084,0.000019998874,0.0003025484],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99769914,0.00024413067,0.0010940282,0.00057328126,0.00010125302,0.00028816724],"domain_scores_gemma":[0.998868,0.00014570054,0.0002828219,0.00035047662,0.00016830527,0.00018473095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008115045,0.00023936697,0.0013591972,0.000064105865,0.000057870453,0.0000066964735,0.000089033114,0.00017085952,0.000084274914],"category_scores_gemma":[0.00032783212,0.00020628634,0.00012885354,0.00024020618,0.00034051738,0.00006722084,0.000086350236,0.00022428778,0.0000017847085],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015982961,0.0004637635,0.9526457,0.0040327273,0.00016020404,0.000045159864,0.00035174176,4.3507626e-7,0.021502512,0.00006753112,0.011921286,0.007210619],"study_design_scores_gemma":[0.0025164199,0.00019085045,0.9841702,0.0039950386,0.000047784306,0.000009927401,0.00006234846,0.000034867742,0.0021697846,0.00006607227,0.006543618,0.00019306218],"about_ca_topic_score_codex":0.00011558899,"about_ca_topic_score_gemma":0.00009215488,"teacher_disagreement_score":0.106480375,"about_ca_system_score_codex":0.000019820216,"about_ca_system_score_gemma":0.00015043096,"threshold_uncertainty_score":0.84121126},"labels":[],"label_agreement":null},{"id":"W3136384471","doi":"10.1371/journal.pbio.3000957","title":"An evolutionarily diverged mitochondrial protein controls biofilm growth and virulence in Candida albicans","year":2021,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; Monash University","keywords":"Biology; Candida albicans; Virulence; Biofilm; Microbiology; Fungal protein; Mitochondrion; Genetics; Saccharomyces cerevisiae; Yeast; Bacteria; Gene","score_opus":0.014687146555405865,"score_gpt":0.26865894340817703,"score_spread":0.25397179685277116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3136384471","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99711263,0.000692532,0.00013242461,0.0010536526,0.00008106648,0.00040811827,0.00006023037,0.000026801214,0.00043252198],"genre_scores_gemma":[0.9984081,0.000087782646,0.00075589976,0.00031567318,0.0001393465,0.00004708481,0.000071181836,0.0000071920554,0.00016777837],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988031,0.00019958806,0.00021753216,0.00042302487,0.00009227972,0.00026449224],"domain_scores_gemma":[0.9994321,0.00007529958,0.000041597974,0.00022722958,0.0001011993,0.00012258977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000091232694,0.00011484968,0.00033450706,0.000052819065,0.00005931731,0.000007797829,0.00006389867,0.00016264217,0.0002005396],"category_scores_gemma":[0.00060468505,0.0000955041,0.000039684444,0.00014396168,0.00024181286,0.000059416627,0.000035123077,0.00019055781,0.00000978621],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042049953,0.00017037532,0.38159147,0.000029610796,0.000020072344,0.000051905252,0.00006905091,5.5585783e-8,0.61629736,0.0012206855,0.000017338145,0.00011156397],"study_design_scores_gemma":[0.004068338,0.0009595448,0.9127259,0.000131045,0.00006411549,0.000027759965,0.00027952038,0.00022255436,0.0784902,0.0024200624,0.00036152653,0.00024940877],"about_ca_topic_score_codex":0.0005813433,"about_ca_topic_score_gemma":0.0014835049,"teacher_disagreement_score":0.53780717,"about_ca_system_score_codex":0.00004922111,"about_ca_system_score_gemma":0.00024471665,"threshold_uncertainty_score":0.38945442},"labels":[],"label_agreement":null},{"id":"W3136868899","doi":"10.1111/ijd.15495","title":"The increasing problem of treatment‐resistant fungal infections: a call for antifungal stewardship programs","year":2021,"lang":"en","type":"review","venue":"International Journal of Dermatology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's College Hospital; Health Sciences Centre; Sunnybrook Health Science Centre; University of Toronto; Mediprobe Research (Canada); Public Health Ontario","funders":"","keywords":"Antifungal; Stewardship (theology); Medicine; Antimicrobial stewardship; Intensive care medicine; Incidence (geometry); Antibiotics; Antibiotic resistance; Microbiology; Biology; Dermatology; Political science","score_opus":0.05837481616384581,"score_gpt":0.38902699320012846,"score_spread":0.33065217703628264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3136868899","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016732957,0.995294,0.00037210152,0.00059561286,0.0007240483,0.00092737266,0.00006184764,0.000012007332,0.0003397681],"genre_scores_gemma":[0.018987423,0.9785886,0.0015805573,0.000018309785,0.00038353502,0.000068668116,0.000096998636,0.00003828523,0.0002376343],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967798,0.00044074745,0.0017858235,0.00024511706,0.0004605339,0.00028799495],"domain_scores_gemma":[0.9946806,0.0014541058,0.0016417765,0.00025878038,0.0018414721,0.00012329998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040690368,0.00031536355,0.0019599819,0.00025809312,0.00011203327,0.00006957067,0.0003600141,0.00029591244,0.0000139891135],"category_scores_gemma":[0.0007615112,0.00018641578,0.0015105553,0.00018285826,0.0002452841,0.00009254624,0.00005908274,0.00041164615,0.0000023025607],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012830383,0.0011699034,0.010298672,0.005696282,0.0056855455,0.0020383194,0.00011149772,3.6249725e-7,0.000040037736,0.0025196988,0.0005881732,0.9705685],"study_design_scores_gemma":[0.0013701356,0.0009690573,0.00014401208,0.011381482,0.0019003554,0.041888747,0.000108504595,0.000005859641,0.000036139547,0.0001860729,0.94185376,0.00015586396],"about_ca_topic_score_codex":0.000030390514,"about_ca_topic_score_gemma":0.00010427389,"teacher_disagreement_score":0.9704126,"about_ca_system_score_codex":0.0005514462,"about_ca_system_score_gemma":0.0026189343,"threshold_uncertainty_score":0.7601815},"labels":[],"label_agreement":null},{"id":"W3136900530","doi":"10.3138/jammi-2020-0023","title":"A pseudo-outbreak of echinocandin-resistant <i>Candida glabrata</i>: The unreliability of caspofungin testing in predicting echinocandin susceptibility","year":2021,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Manitoba; Queen Elizabeth II Health Sciences Centre; Canadian Science Centre for Human and Animal Health; Dalhousie University","funders":"","keywords":"Echinocandin; Candida glabrata; Caspofungin; Outbreak; Microbiology; Echinocandins; Biology; Micafungin; Antifungal; Virology; Fluconazole","score_opus":0.006404914207261597,"score_gpt":0.2321924498484574,"score_spread":0.2257875356411958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3136900530","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949681,0.00085272087,0.000019360696,0.0033356186,0.0003350216,0.00019253348,0.00017792826,0.0000031065777,0.000115581985],"genre_scores_gemma":[0.9993557,0.0001125695,0.000025875244,0.0003944911,0.00006365947,0.0000012827205,0.0000073021083,0.0000063288708,0.000032807176],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9971789,0.0007072886,0.0011709911,0.00018675638,0.0005293165,0.00022671306],"domain_scores_gemma":[0.9955922,0.0018593204,0.0012958287,0.00030007065,0.00075062265,0.00020195528],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0032762906,0.00013688402,0.0006540896,0.000056453708,0.0001030979,0.000005419311,0.00019725638,0.00018346048,0.00006170047],"category_scores_gemma":[0.018869275,0.000082948536,0.00019981213,0.0004354171,0.0003066747,0.000048693753,0.000104559265,0.00063955365,4.9131593e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004598911,0.00025894752,0.9698217,0.00033427108,0.00016083234,0.000029221372,0.000120648714,0.00002025408,0.027815953,0.00010511963,0.0005692205,0.00030392007],"study_design_scores_gemma":[0.0014828141,0.00019406989,0.99177855,0.0005902571,0.00025162034,0.000071835966,0.0003987127,0.000108435415,0.004480334,0.0004505375,0.00012175679,0.00007105702],"about_ca_topic_score_codex":0.049237143,"about_ca_topic_score_gemma":0.36440402,"teacher_disagreement_score":0.3151669,"about_ca_system_score_codex":0.00062772224,"about_ca_system_score_gemma":0.0055230614,"threshold_uncertainty_score":0.9893952},"labels":[],"label_agreement":null},{"id":"W3137136187","doi":"10.1073/pnas.2016818118","title":"Lineage-specific selection and the evolution of virulence in the <i>Candida</i> clade","year":2021,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; National Institute of General Medical Sciences; Government of Canada","keywords":"Biology; Virulence; Candida dubliniensis; Gene; Candida albicans; Genetics; Genome; Lineage (genetic); Corpus albicans; Phylogenetics; Phenotype; Negative selection","score_opus":0.02969168978273173,"score_gpt":0.30132588143273326,"score_spread":0.2716341916500015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137136187","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98870075,0.0012872249,0.0000059372865,0.0065063057,0.000009248672,0.00016959671,0.0000030297656,0.0000024883866,0.003315431],"genre_scores_gemma":[0.99904895,0.0003080394,0.00025002583,0.00025487883,0.000047718266,0.000004865772,6.354416e-8,0.000001267435,0.0000841806],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99864686,0.00002042275,0.00026691725,0.00015649582,0.0008267048,0.000082617546],"domain_scores_gemma":[0.99922055,0.0002443154,0.00021110667,0.000010214122,0.0003020709,0.0000117344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001981125,0.00005001438,0.00013680434,0.000055302273,0.0001278144,0.000010690745,0.00023076002,0.000049189814,0.0000066317098],"category_scores_gemma":[0.0008155133,0.000023102151,0.000054339223,0.00095839205,0.001135729,0.00016071441,0.000042494645,0.00019067396,2.1475692e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029192714,0.00011579147,0.1895978,0.00017424503,0.000012742357,1.9052596e-8,0.001130069,0.00002745028,0.6430829,0.16451065,0.00058279745,0.00047361763],"study_design_scores_gemma":[0.0005288873,0.00004502458,0.81253785,0.00016904136,0.000018014318,0.000017806231,0.002462769,0.0010258306,0.1607193,0.02225368,0.00018646597,0.000035306715],"about_ca_topic_score_codex":0.00001828453,"about_ca_topic_score_gemma":0.0000019025698,"teacher_disagreement_score":0.62294006,"about_ca_system_score_codex":0.00004077393,"about_ca_system_score_gemma":0.00007529176,"threshold_uncertainty_score":0.41846406},"labels":[],"label_agreement":null},{"id":"W3137414446","doi":"10.1101/2021.03.17.435915","title":"The SAGA and NuA4 component Tra1 regulates <i>Candida albicans</i> drug resistance and pathogenesis","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Guelph","funders":"","keywords":"Biology; Candida albicans; Transcriptome; Caspofungin; Glutamine amidotransferase; Corpus albicans; Microbiology; Genetics; Gene; Gene expression; Glutamine; Amphotericin B","score_opus":0.010046648128434444,"score_gpt":0.2136019226745523,"score_spread":0.20355527454611785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137414446","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9579682,0.038416773,0.000099222016,0.0020308166,0.00037077014,0.0008083913,0.00012472925,0.00015312158,0.000027973307],"genre_scores_gemma":[0.98757017,0.00954017,0.0018921923,0.00038662212,0.00022546043,0.00010611926,0.0000010367276,0.00009784587,0.0001804071],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9966206,0.00024506633,0.0006568739,0.0013163647,0.0005520346,0.00060907897],"domain_scores_gemma":[0.99682647,0.00028816648,0.00031670253,0.001621357,0.00049242825,0.00045484825],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010139986,0.0005931308,0.00091299694,0.000088376466,0.00052467996,0.00035507776,0.00026801153,0.0003702731,0.000024601919],"category_scores_gemma":[0.00032464036,0.00048049568,0.00018607915,0.00030868026,0.00061669026,0.000098051634,0.00040648357,0.00074643036,0.0000035117453],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072179636,0.0002730642,0.13999169,0.0025854055,0.00052252505,0.00045300781,0.000108377484,0.000002124507,0.85268784,0.0006372088,0.001985941,0.000031022584],"study_design_scores_gemma":[0.0009101808,0.000034437184,0.91111416,0.0012606404,0.00039869137,1.4395422e-7,0.00006452529,0.000058031175,0.070655346,0.0000067020233,0.01482871,0.00066840445],"about_ca_topic_score_codex":0.000074649724,"about_ca_topic_score_gemma":0.00016550816,"teacher_disagreement_score":0.7820325,"about_ca_system_score_codex":0.00020226513,"about_ca_system_score_gemma":0.0006316654,"threshold_uncertainty_score":0.9997647},"labels":[],"label_agreement":null},{"id":"W3137656879","doi":"10.3390/jof7030240","title":"Genomic Epidemiology of Candida auris in Qatar Reveals Hospital Transmission Dynamics and a South Asian Origin","year":2021,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Candida auris; Outbreak; Transmission (telecommunications); Molecular epidemiology; Biology; Multiple drug resistance; Epidemiology; Drug resistance; Genotype; Genetics; Microbiology; Virology; Medicine; Gene; Antifungal","score_opus":0.018114825842897614,"score_gpt":0.2964682015089391,"score_spread":0.27835337566604146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137656879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873784,0.009258328,0.0013078217,0.0016296775,0.000091699796,0.000081631704,0.000016482089,0.0000021275598,0.00023379594],"genre_scores_gemma":[0.99423325,0.0014133767,0.0038504058,0.00011027586,0.00007736587,3.525064e-7,0.000005233957,0.000008401946,0.00030130817],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987436,0.00010261054,0.0007046374,0.00014085633,0.00012996515,0.00017833464],"domain_scores_gemma":[0.9991099,0.00015660505,0.0002968325,0.00014132011,0.00013692731,0.00015836835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008747017,0.00009388486,0.00064031506,0.000098897086,0.000019244413,0.0000022634608,0.000053705506,0.00010949221,0.000079415964],"category_scores_gemma":[0.000399932,0.00007187046,0.00014380536,0.00012651399,0.00006352489,0.000053353364,0.000013548238,0.00031340655,0.0000010990756],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004033591,0.0001078741,0.9788441,0.00017759665,0.000049613376,0.0003411439,0.0008456713,0.000003681665,0.008799702,0.00016684984,0.00016313404,0.010097297],"study_design_scores_gemma":[0.0011646588,0.00048451766,0.9949895,0.00041224115,0.00008181234,0.00016084085,0.0010926728,0.00025703968,0.00042850044,0.0006114201,0.00024665502,0.00007011215],"about_ca_topic_score_codex":0.000032630072,"about_ca_topic_score_gemma":0.0000886537,"teacher_disagreement_score":0.016145453,"about_ca_system_score_codex":0.00013192992,"about_ca_system_score_gemma":0.00031692936,"threshold_uncertainty_score":0.29307923},"labels":[],"label_agreement":null},{"id":"W3137677271","doi":"10.1128/mbio.03181-20","title":"Environmental Isolation of Candida auris from the Coastal Wetlands of Andaman Islands, India","year":2021,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":213,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Candida auris; Isolation (microbiology); Fungal pathogen; Pathogen; Opportunistic pathogen; Biology; Wetland; Human pathogen; Ecology; Niche; Antifungal; Geography; Microbiology; Virulence","score_opus":0.007497544933920912,"score_gpt":0.22692181095573452,"score_spread":0.2194242660218136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137677271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975945,0.00029184387,0.000104009814,0.00015382438,0.00004443284,0.00007091175,0.00030103256,0.0000039369656,0.0014355597],"genre_scores_gemma":[0.99891555,0.00009282069,0.00010260711,0.0000858781,0.000055826586,0.0000010070601,0.00026380204,0.0000047556623,0.00047774115],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994514,0.000021765703,0.00016768259,0.000115412,0.00016755219,0.00007619177],"domain_scores_gemma":[0.9996163,0.00005940246,0.0000632019,0.00021476665,0.000017120718,0.000029186407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000788089,0.00005573501,0.00016198837,0.000010147231,0.000030317962,0.0000032656587,0.00003620153,0.000048664555,0.0007210564],"category_scores_gemma":[0.000033971406,0.000038175105,0.00006355676,0.000053966138,0.000085140244,0.000024017176,0.000028124177,0.00007660597,0.000005182821],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013404767,0.00008011496,0.8803038,0.000014813154,0.000032813972,0.0000070400456,0.0006639449,1.7313869e-7,0.1174807,0.000010813111,0.00063988863,0.0006318645],"study_design_scores_gemma":[0.00066340435,0.00008382454,0.9423169,0.000035347737,0.000047260186,0.0000019412632,0.0009621533,0.000026072876,0.055207163,0.00005240604,0.0005691606,0.000034379762],"about_ca_topic_score_codex":0.00024788064,"about_ca_topic_score_gemma":0.0010640671,"teacher_disagreement_score":0.062273543,"about_ca_system_score_codex":0.000012287588,"about_ca_system_score_gemma":0.000059715698,"threshold_uncertainty_score":0.78950626},"labels":[],"label_agreement":null},{"id":"W3140304988","doi":"10.1128/mbio.03328-20","title":"Balancing Positive and Negative Selection: <i>In Vivo</i> Evolution of Candida lusitaniae <i>MRR1</i>","year":2021,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Division of Microbiology and Infectious Diseases, National Institute of Allergy and Infectious Diseases; National Institute of Allergy and Infectious Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institute for Advanced Research; NIH Office of the Director; National Heart, Lung, and Blood Institute; Dartmouth College; National Institute of General Medical Sciences; National Cancer Institute; National Science Foundation; National Institutes of Health; Cystic Fibrosis Foundation","keywords":"Biology; Microbiology; Pathogen; Selection (genetic algorithm); Computer science","score_opus":0.004939487685769462,"score_gpt":0.23523971924155215,"score_spread":0.2303002315557827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3140304988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906127,0.00094988185,0.00028911198,0.0002675713,0.000044247983,0.00012410125,0.000019574749,0.000012717497,0.0076801344],"genre_scores_gemma":[0.9982607,0.000060582686,0.0004078925,0.00018810302,0.00004237487,0.000002645416,0.0000034402115,0.0000060420975,0.001028244],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99931157,0.00003479919,0.00016880786,0.0002111406,0.00013552987,0.00013814383],"domain_scores_gemma":[0.99958336,0.00006988647,0.000040665233,0.00008343114,0.00016940151,0.0000532729],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001223286,0.00007615531,0.0002204701,0.000036155747,0.000045710563,0.0000057748707,0.000016381186,0.000060808587,0.000097065385],"category_scores_gemma":[0.00013546545,0.00007300457,0.000039523427,0.0003065954,0.000062678,0.000062319334,0.000020353067,0.000117827614,0.0000024047833],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021589884,0.00008689093,0.6902213,0.00008645501,0.000024491586,0.0000471802,0.0005196705,0.000001124224,0.30738646,0.00047773425,0.00048798174,0.00044483133],"study_design_scores_gemma":[0.00092481496,0.00014776769,0.82413286,0.00022039509,0.000039190818,0.000046598914,0.0011590964,0.00012114151,0.17258334,0.00030933446,0.00023388134,0.00008155085],"about_ca_topic_score_codex":0.00075392093,"about_ca_topic_score_gemma":0.0037528232,"teacher_disagreement_score":0.1348031,"about_ca_system_score_codex":0.00020448102,"about_ca_system_score_gemma":0.00020498279,"threshold_uncertainty_score":0.297704},"labels":[],"label_agreement":null},{"id":"W3141044489","doi":"10.1371/journal.pone.0249547","title":"Targeting Candida albicans in dual-species biofilms with antifungal treatment reduces Staphylococcus aureus and MRSA in vitro","year":2021,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Queen's University; Universität Wien; Medizinische Universität Wien; Queen's University Belfast","keywords":"Biofilm; Microbiology; Candida albicans; Staphylococcus aureus; Pseudomonas aeruginosa; Corpus albicans; Biology; Bacteria","score_opus":0.03343592978444474,"score_gpt":0.24234742052987307,"score_spread":0.20891149074542834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3141044489","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948527,0.0025257738,0.0000023033008,0.00088643446,0.000015565765,0.0003839427,0.000050110586,0.000027731036,0.0012554356],"genre_scores_gemma":[0.9952809,0.00094614754,0.0014622664,0.00008681504,0.00007988533,0.00003252501,0.00007054141,0.000018874609,0.002022007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850965,0.00007232612,0.00029207655,0.00045441475,0.00031042023,0.00036112432],"domain_scores_gemma":[0.9993819,0.000097737066,0.000056632376,0.00024859977,0.00009168099,0.00012345878],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015435432,0.00019249244,0.00054490875,0.00011271294,0.00006048767,0.00002876205,0.000029257746,0.000078578756,0.00015321994],"category_scores_gemma":[0.00014821821,0.00014777212,0.000036432994,0.00035965227,0.00014282757,0.000079010264,0.000029031706,0.00019436484,0.000004147293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058674935,0.0013193592,0.35408953,0.0000926739,0.00009355349,0.00067196,0.0007309423,0.0000012644307,0.6421592,0.000007607343,0.000026511796,0.00022065525],"study_design_scores_gemma":[0.0019737724,0.0003881723,0.35777968,0.00040272294,0.000098123855,0.0000031123716,0.0026347197,0.00008502183,0.63637924,0.000010904976,0.00007663731,0.0001679116],"about_ca_topic_score_codex":0.00046854775,"about_ca_topic_score_gemma":0.0021793428,"teacher_disagreement_score":0.005779981,"about_ca_system_score_codex":0.00021512422,"about_ca_system_score_gemma":0.00026485338,"threshold_uncertainty_score":0.60259724},"labels":[],"label_agreement":null},{"id":"W3142207355","doi":"10.4021/jmc395w","title":"Alternaria Alternata Infection in A Patient With Acute Promyelocytic Leukemia","year":2012,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Alternaria alternata; Acute promyelocytic leukemia; Leukemia; Alternaria; Dermatology; Immunology; Retinoic acid; Botany","score_opus":0.023265492762482524,"score_gpt":0.3180147629765294,"score_spread":0.2947492702140469,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3142207355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99750674,0.0006242636,0.00036766342,0.0008672696,0.00026207886,0.00012802136,0.0000015067142,0.000007110937,0.00023536565],"genre_scores_gemma":[0.9983635,0.00041754442,0.00023310175,0.00043061917,0.0004931216,0.0000028259433,0.0000016827272,0.000009769688,0.00004784283],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979437,0.00006595334,0.0004636034,0.000092260816,0.0011850604,0.00024941124],"domain_scores_gemma":[0.9989545,0.00012343466,0.00021486767,0.00013644891,0.000118096345,0.00045267263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000740878,0.000104504485,0.00033019227,0.00011739964,0.000024203471,0.000010180674,0.00007444065,0.00009825124,0.00031497166],"category_scores_gemma":[0.0008318389,0.000061996965,0.00008509446,0.0001460581,0.000083864994,0.00022267469,0.000028685405,0.0005329088,0.000009284584],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022438623,0.0005123493,0.9628696,0.000118573764,0.00013593952,0.017421877,0.0004206664,0.0000031824534,0.00034181096,0.00005171966,0.001579837,0.014300599],"study_design_scores_gemma":[0.005203687,0.0045500677,0.91820365,0.002086225,0.00036319208,0.060100686,0.00033341994,0.00022721682,0.00337644,0.000046349436,0.005308945,0.00020010247],"about_ca_topic_score_codex":0.0002335068,"about_ca_topic_score_gemma":0.00017981409,"teacher_disagreement_score":0.04466591,"about_ca_system_score_codex":0.00038056192,"about_ca_system_score_gemma":0.00068586925,"threshold_uncertainty_score":0.34487188},"labels":[],"label_agreement":null},{"id":"W3145171458","doi":"10.1097/mat.0000000000001427","title":"Voriconazole Sequestration During Extracorporeal Membrane Oxygenation for Invasive Lung Aspergillosis: A Case Report","year":2021,"lang":"en","type":"article","venue":"ASAIO Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Voriconazole; Extracorporeal membrane oxygenation; Therapeutic drug monitoring; Dosing; Therapeutic index; Lung; Aspergillosis","score_opus":0.023078843078616663,"score_gpt":0.30749818958033,"score_spread":0.2844193465017133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3145171458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936089,0.00047346254,0.0028795244,0.00080254633,0.00030052895,0.0001992742,0.000010701923,0.000029500685,0.0016955563],"genre_scores_gemma":[0.9939275,0.00017255913,0.002123475,0.00014349398,0.0007031858,0.000017204631,0.00008059979,0.000019855812,0.0028121641],"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","domain_scores_codex":[0.99853307,0.000052985106,0.00056084996,0.00027458565,0.00033034317,0.00024814552],"domain_scores_gemma":[0.9984285,0.00008749707,0.0002713693,0.00022690352,0.00078390475,0.00020181261],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005671588,0.00013377864,0.00025720274,0.00007654135,0.00032532116,0.00007428664,0.000038788756,0.00010733798,0.00017886255],"category_scores_gemma":[0.0008581622,0.000121105586,0.0002067842,0.00015605282,0.000031217798,0.0003045829,0.000014383558,0.00029791592,0.0000043635264],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006490359,0.00034673917,0.18254009,0.0005244135,0.00030654215,0.31901917,0.0004869445,0.000050700106,0.49231142,0.00050896354,0.0014116677,0.0018443073],"study_design_scores_gemma":[0.0025585468,0.00017390883,0.33393946,0.00028312547,0.0003429336,0.46445358,0.0011693514,0.00030599482,0.19574349,0.0005444713,0.00025112164,0.00023402036],"about_ca_topic_score_codex":0.000021072234,"about_ca_topic_score_gemma":0.00024371302,"teacher_disagreement_score":0.29656795,"about_ca_system_score_codex":0.0002634795,"about_ca_system_score_gemma":0.00073876005,"threshold_uncertainty_score":0.49385422},"labels":[],"label_agreement":null},{"id":"W3152075820","doi":"10.1101/2021.04.07.438821","title":"Tracing patterns of evolution and acquisition of drug resistant <i>Aspergillus fumigatus</i> infection from the environment using population genomics","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Trinity College Dublin; Wellcome Trust; Medical Research Council; Canadian Institute for Advanced Research; Medical Research Council Centre for Medical Mycology; University of Exeter; Natural Environment Research Council; Gilead Sciences","keywords":"Biology; Aspergillus fumigatus; Drug resistance; Population; Antifungal drug; Genetics; Clade; Azole; Genome; Gene; Genotype; Microbiology; Candida albicans; Phylogenetics; Antifungal; Medicine","score_opus":0.012280241600035534,"score_gpt":0.2164748983019678,"score_spread":0.20419465670193226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3152075820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890556,0.0022716555,0.0074796556,0.000054906624,0.00024191506,0.00055511564,0.0003071952,0.000033140277,8.2954483e-7],"genre_scores_gemma":[0.9974053,0.00059661065,0.0017356134,0.00003309127,0.00016485674,0.000012464451,0.000006992719,0.00004428162,8.152107e-7],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9979371,0.00018987541,0.0006834538,0.00059057097,0.00039170808,0.00020729152],"domain_scores_gemma":[0.9981751,0.00007505071,0.0006167615,0.0008149908,0.00022559511,0.000092491005],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00055447983,0.00028312643,0.0005706947,0.000091432536,0.00012452611,0.00003782227,0.00008506389,0.000294117,0.000024470884],"category_scores_gemma":[0.00009191165,0.00025955326,0.0001666076,0.00014516758,0.00010259381,0.000119440876,0.00017845338,0.00039437198,5.8969584e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000099253535,0.00007630149,0.42322937,0.0004465167,0.00008057816,0.0000043369037,0.000042173182,0.00022861257,0.5757588,0.00003048516,0.0000011210668,0.0000024225637],"study_design_scores_gemma":[0.00034540036,0.000031754513,0.8106395,0.0011157154,0.00035642847,1.586098e-8,0.00003931204,0.0008019397,0.18648721,0.000003435612,0.000008485076,0.00017081351],"about_ca_topic_score_codex":0.0038324855,"about_ca_topic_score_gemma":0.000099833385,"teacher_disagreement_score":0.38927162,"about_ca_system_score_codex":0.00068276795,"about_ca_system_score_gemma":0.00023862506,"threshold_uncertainty_score":0.9999857},"labels":[],"label_agreement":null},{"id":"W3159148700","doi":"10.1007/s40588-021-00169-5","title":"Germination of a Field: Women in Candida albicans Research","year":2021,"lang":"en","type":"article","venue":"Current Clinical Microbiology Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Candida albicans; Germination; Field (mathematics); Biology; Microbiology; Botany; Mathematics","score_opus":0.11955459824733197,"score_gpt":0.4925477892201003,"score_spread":0.3729931909727683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159148700","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99602187,0.0012578808,0.000014540994,0.0006354484,0.00060945965,0.00020873436,0.0000060427337,0.000009206396,0.0012367934],"genre_scores_gemma":[0.99809027,0.00031653055,0.000053728494,0.00012301965,0.00009145365,0.000016822443,0.000063280386,0.000005831049,0.0012390473],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99756706,0.00041562848,0.0010717972,0.00047211497,0.000086307184,0.00038711098],"domain_scores_gemma":[0.9980208,0.0007514398,0.00017576545,0.00047587714,0.0004459558,0.00013013439],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034719054,0.00008214885,0.0005312784,0.0000941961,0.000029235678,0.0000033499166,0.000051750914,0.00022236929,0.0005498865],"category_scores_gemma":[0.007060259,0.00007039479,0.00013528357,0.0003268569,0.0003150784,0.000023127868,0.000089373665,0.0006901683,0.000009181016],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001892796,0.0007683764,0.9491908,0.00013255118,0.000021794416,0.00050948345,0.00016596462,9.1294574e-8,0.029449977,0.000033216806,0.0019816966,0.017556746],"study_design_scores_gemma":[0.0010122146,0.0006313504,0.9239699,0.00039439334,0.000024063103,0.00042459523,0.00040555198,0.0000038929,0.007496937,0.0011665744,0.06433682,0.00013370028],"about_ca_topic_score_codex":0.00002369252,"about_ca_topic_score_gemma":0.00019368544,"teacher_disagreement_score":0.062355123,"about_ca_system_score_codex":0.00012003384,"about_ca_system_score_gemma":0.00084512256,"threshold_uncertainty_score":0.84523},"labels":[],"label_agreement":null},{"id":"W3159431332","doi":"10.1016/j.micres.2021.126786","title":"Calcium-calcineurin signaling pathway in Candida albicans: A potential drug target","year":2021,"lang":"en","type":"review","venue":"Microbiological Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Science and Technology Commission of Shanghai Municipality","keywords":"Calcineurin; Candida albicans; Corpus albicans; Biology; Signal transduction; Antifungal drug; Microbiology; Calcium signaling; Cell biology; Transplantation; Medicine; Internal medicine","score_opus":0.1830134578693533,"score_gpt":0.44610067869346315,"score_spread":0.26308722082410985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159431332","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005320672,0.9914236,0.00004154255,0.00021203204,0.00012435131,0.0017093645,0.00020842726,0.000050636754,0.0009093802],"genre_scores_gemma":[0.009876135,0.9795489,0.00035327324,0.000114649345,0.00038489373,0.0001930698,0.0010445104,0.00006620136,0.008418416],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99239933,0.002549222,0.0012294669,0.0015873511,0.0006637302,0.0015708739],"domain_scores_gemma":[0.996909,0.0012024923,0.0001368664,0.00087208074,0.0004427447,0.00043676968],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0039881226,0.00059372524,0.003288207,0.00050607824,0.00020375877,0.00008932188,0.000581374,0.0009568934,0.0032113432],"category_scores_gemma":[0.002229569,0.00038958105,0.0010483853,0.001532223,0.0006251044,0.000043472744,0.0005938853,0.004039826,0.00034353047],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008920403,0.0035250157,0.0016670224,0.04942043,0.00067270495,0.022693492,0.00026134713,0.000005546962,0.035233144,0.00041283527,0.021578213,0.8636382],"study_design_scores_gemma":[0.00057696487,0.00024986704,0.0000866988,0.013601841,0.00007541858,0.00015966204,0.00014255423,0.0000028097836,0.00046901606,0.00004597311,0.98416716,0.0004220216],"about_ca_topic_score_codex":0.0003089098,"about_ca_topic_score_gemma":0.00012593954,"teacher_disagreement_score":0.96258897,"about_ca_system_score_codex":0.00076183403,"about_ca_system_score_gemma":0.0022911315,"threshold_uncertainty_score":0.99985564},"labels":[],"label_agreement":null},{"id":"W3159621893","doi":"10.1111/myc.13290","title":"Comparative effectiveness of amphotericin B, azoles and echinocandins in the treatment of candidemia and invasive candidiasis: A systematic review and network meta‐analysis","year":2021,"lang":"en","type":"review","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; McGill University Health Centre","funders":"","keywords":"Echinocandins; Amphotericin B; Medicine; Echinocandin; Voriconazole; Meta-analysis; Internal medicine; Fluconazole; Randomized controlled trial; Intensive care medicine; Caspofungin; Antifungal; Dermatology","score_opus":0.10836472103242467,"score_gpt":0.3912687447345911,"score_spread":0.28290402370216644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159621893","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010665656,0.9856555,0.0000059850927,0.000009612755,0.000008121418,0.0035102873,0.000113726106,0.0000033405615,0.000027786738],"genre_scores_gemma":[0.090777874,0.90869254,0.000028139748,0.00003514547,0.00000840846,0.0003679976,0.00006958326,0.000009512233,0.000010786939],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99634427,0.002042743,0.00086096325,0.0003999275,0.00018513689,0.00016695498],"domain_scores_gemma":[0.9950868,0.0037780886,0.0005504954,0.00043334582,0.00008406332,0.00006724751],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010777143,0.0003883302,0.011442099,0.00014636689,0.000047796766,0.000017092336,0.000069920905,0.000113753136,0.000009263893],"category_scores_gemma":[0.00019395365,0.00019025999,0.0007332919,0.0008034685,0.00019450534,0.00003440384,0.00002960236,0.000122523,1.6150675e-7],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003336523,0.00013952857,0.0029738066,0.9406906,0.05471675,0.00003465508,0.00075874955,6.8496666e-7,0.0000011083772,0.000030655225,0.000008347697,0.0006117626],"study_design_scores_gemma":[0.0003492756,0.00042760876,0.0044576675,0.27799693,0.71552616,0.000049740425,0.0006227606,0.0000016831942,0.000013293993,0.000013132256,0.00035779554,0.00018395718],"about_ca_topic_score_codex":0.00097459333,"about_ca_topic_score_gemma":0.0035389306,"teacher_disagreement_score":0.6626937,"about_ca_system_score_codex":0.000089021,"about_ca_system_score_gemma":0.0002292274,"threshold_uncertainty_score":0.782159},"labels":[],"label_agreement":null},{"id":"W3160042726","doi":"10.1038/s41598-021-99838-0","title":"The network interplay of interferon and Toll-like receptor signaling pathways in the anti-Candida immune response","year":2021,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Arthritis Research Centre of Canada; Discovery Centre; University of Toronto","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Natural Sciences and Engineering Research Council of Canada; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Biology; Immune system; Transcriptome; Innate immune system; Candida albicans; Interferon; Signal transduction; Toll-like receptor; Microarray analysis techniques; Candida tropicalis; Pattern recognition receptor; Receptor; Immunology; Computational biology; Gene; Microbiology; Cell biology; Gene expression; Genetics","score_opus":0.01494308504019285,"score_gpt":0.27005236943713296,"score_spread":0.2551092843969401,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3160042726","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933382,0.0030520498,0.00006446802,0.0006114158,0.0022660603,0.00026993582,0.0000018764567,0.000011666698,0.0003843265],"genre_scores_gemma":[0.99779534,0.00006399462,0.00009781509,0.000072746916,0.000051840434,0.0000073889596,0.00001633067,0.000008652814,0.0018858965],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99765754,0.0004341811,0.00069610326,0.00048054865,0.00043836914,0.00029328666],"domain_scores_gemma":[0.997968,0.0005536034,0.00023046737,0.0009958885,0.00019414017,0.00005785421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.009224435,0.000116730516,0.00028949833,0.000040117277,0.00031668675,0.00014399893,0.00011740429,0.000060881543,0.00006849484],"category_scores_gemma":[0.0011854443,0.00006574582,0.000111753594,0.00052827806,0.00048350764,0.000070361,0.00010341282,0.00023393468,0.0000032026642],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017004367,0.00016817676,0.10546472,0.000096429154,0.000044756227,0.001294727,0.004460344,0.000020656931,0.8740977,0.000099623176,0.009194817,0.0033576018],"study_design_scores_gemma":[0.0017495664,0.00089848303,0.5320676,0.003344953,0.00020073973,0.0022219727,0.03744102,0.00047170694,0.3182111,0.0058043175,0.096907064,0.000681489],"about_ca_topic_score_codex":0.000017571341,"about_ca_topic_score_gemma":0.000120377386,"teacher_disagreement_score":0.5558866,"about_ca_system_score_codex":0.000044114564,"about_ca_system_score_gemma":0.00031552423,"threshold_uncertainty_score":0.31970236},"labels":[],"label_agreement":null},{"id":"W3161134143","doi":"10.1021/acscentsci.1c00520","title":"Glycosylated Polyene Macrolides Kill Fungi via a Conserved Sterol Sponge Mechanism of Action","year":2021,"lang":"en","type":"article","venue":"ACS Central Science","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Animal Health and Welfare ERA-Net; Canada Research Chairs; Canadian Institute for Advanced Research","keywords":"License; Polyene; World Wide Web; Library science; Chemistry; Computational biology; Computer science; Biology; Political science; Law; Biochemistry","score_opus":0.026865386414911947,"score_gpt":0.2950937652330741,"score_spread":0.2682283788181622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3161134143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971573,0.00025302646,0.0010544832,0.00042173584,0.0002752936,0.00019373448,0.0000121305475,0.000037879185,0.0005944517],"genre_scores_gemma":[0.99837947,0.00014374759,0.0004529999,0.0003468077,0.000035290566,0.0000021288574,0.000008633029,0.0000070974806,0.0006238008],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982991,0.000044967277,0.00026926282,0.00039860018,0.00048317024,0.0005049059],"domain_scores_gemma":[0.9989189,0.00004689794,0.00009459131,0.00037571628,0.0003190232,0.00024488696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038465005,0.00011778401,0.00024983526,0.00005860346,0.00013015476,0.000026662217,0.00015513338,0.00007002117,0.00032834237],"category_scores_gemma":[0.00027890515,0.00009986924,0.0000805251,0.00073551876,0.00034154006,0.00024302032,0.00006985138,0.00013372216,0.000017653556],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024005052,0.00012303409,0.036962558,0.000054353488,0.00001312009,0.000060525286,0.00014226371,0.0000011255581,0.95601445,0.0006445159,0.0000244949,0.0057195183],"study_design_scores_gemma":[0.00044687456,0.00010587045,0.29881626,0.000058769787,0.000030847124,0.000045092,0.00017380966,0.00037945394,0.6994276,0.00032907285,0.00010992311,0.000076435375],"about_ca_topic_score_codex":0.00015046756,"about_ca_topic_score_gemma":0.00023943985,"teacher_disagreement_score":0.2618537,"about_ca_system_score_codex":0.00013897705,"about_ca_system_score_gemma":0.00049952685,"threshold_uncertainty_score":0.40725496},"labels":[],"label_agreement":null},{"id":"W3161328002","doi":"10.1016/j.idc.2021.03.014","title":"Emerging Fungal Infections","year":2021,"lang":"en","type":"review","venue":"Infectious Disease Clinics of North America","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Fungal disease; Intensive care medicine; Emerging infectious disease; Disease; Pathology; Dermatology","score_opus":0.03518212883722737,"score_gpt":0.3799075025208153,"score_spread":0.3447253736835879,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3161328002","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0025130447,0.9936747,0.0002239958,0.000021849859,0.0006068886,0.00086443115,0.00036270157,0.00016477483,0.0015676392],"genre_scores_gemma":[0.0047560646,0.99320996,0.000051114184,0.00017312018,0.0003945556,0.0001092612,0.00079708744,0.0000918796,0.00041697873],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965409,0.00026618456,0.0014927168,0.00079823943,0.00046268915,0.00043925003],"domain_scores_gemma":[0.99601275,0.0006491202,0.0009091015,0.0012416331,0.00051651616,0.00067088567],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000189163,0.0005517021,0.0030974313,0.00031566265,0.00016659756,0.000024833127,0.00016603775,0.0002163255,0.00040633816],"category_scores_gemma":[0.0021023033,0.0004976854,0.0026129861,0.0013153862,0.0003594579,0.00008498447,0.00014581943,0.0009141769,0.00016613408],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025110978,0.0010923248,0.18018684,0.012793285,0.0005856544,0.00019680859,0.000010974189,0.000004666893,8.756857e-9,0.0000100387215,0.00076332473,0.80433095],"study_design_scores_gemma":[0.00029460655,0.00034003984,0.017714161,0.0064358576,0.0048988266,0.000035569592,0.000010641857,0.000008597067,2.0699972e-8,0.000014403189,0.9698486,0.00039867664],"about_ca_topic_score_codex":0.00004220596,"about_ca_topic_score_gemma":0.0001065074,"teacher_disagreement_score":0.9690853,"about_ca_system_score_codex":0.0001784868,"about_ca_system_score_gemma":0.0028321662,"threshold_uncertainty_score":0.99974746},"labels":[],"label_agreement":null},{"id":"W3163992429","doi":"10.1101/2021.05.21.21257626","title":"COVID-19 Associated Pulmonary Aspergillosis: Systematic Review and Patient-Level Meta-analysis","year":2021,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Interquartile range; Incidence (geometry); Intensive care unit; Cohort study; Cohort; Internal medicine; Pediatrics; Intensive care medicine","score_opus":0.11643549912006135,"score_gpt":0.34180408473355256,"score_spread":0.2253685856134912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3163992429","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1367099,0.84804976,0.00038779853,0.008856591,0.00014192091,0.004248172,0.0005871232,0.00018622469,0.00083253713],"genre_scores_gemma":[0.96743536,0.017746003,0.00021675158,0.011510772,0.000015842665,0.0004976278,0.0005892645,0.00004219994,0.0019462063],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99482274,0.0011507481,0.0014922243,0.0012127156,0.0009535955,0.00036799337],"domain_scores_gemma":[0.995663,0.00040599774,0.000838051,0.001863415,0.00053095294,0.0006985856],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0019841676,0.0005687224,0.006543315,0.00023540236,0.00013375502,0.00006900941,0.00025532558,0.00042356213,0.0016684231],"category_scores_gemma":[0.01063135,0.00040302047,0.0031671512,0.00086112897,0.000120580735,0.000059826863,0.0004699659,0.000764838,0.00001897459],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026521378,0.00044099096,0.06318371,0.652752,0.28183937,0.0007095112,0.0003463745,0.000010145012,0.00006864713,0.000013656267,0.0005959783,0.000013122216],"study_design_scores_gemma":[0.0001544567,0.000045965626,0.03323029,0.009731221,0.9557443,0.000027117132,0.00037499057,0.00010801479,0.000024360774,0.000056109173,0.00005308975,0.0004500341],"about_ca_topic_score_codex":0.0002179429,"about_ca_topic_score_gemma":0.00035558944,"teacher_disagreement_score":0.83072543,"about_ca_system_score_codex":0.0003557391,"about_ca_system_score_gemma":0.00066481624,"threshold_uncertainty_score":0.99984217},"labels":[],"label_agreement":null},{"id":"W3165053782","doi":"10.1111/cmi.13371","title":"Candidalysin triggers epithelial cellular stresses that induce necrotic death","year":2021,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Institute of Dental and Craniofacial Research; Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; Directorate for Biological Sciences; King's College London; Deutsche Forschungsgemeinschaft; Wellcome Trust; National Institutes of Health; Pfizer","keywords":"Biology; Programmed cell death; Candida albicans; Apoptosis; Cell biology; Secretion; Necrosis; Cell; Mitochondrion; Cell damage; Microbiology; Biochemistry","score_opus":0.02624022215826866,"score_gpt":0.2560677365170605,"score_spread":0.22982751435879184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165053782","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904078,0.0056493343,0.0011520752,0.0005402666,0.00045644105,0.00028373077,0.00007767601,0.000066244764,0.0013664148],"genre_scores_gemma":[0.9918372,0.00020267953,0.00044316388,0.0006179872,0.00019989483,0.000008348114,0.0006773994,0.000035115514,0.005978196],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980004,0.00023687124,0.00037166313,0.0007010907,0.00010638248,0.0005835906],"domain_scores_gemma":[0.9986641,0.0001210939,0.00011422248,0.0007169581,0.00018910339,0.00019452792],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025514088,0.00029196986,0.0006881105,0.000091140435,0.00014961202,0.000032604887,0.0001629644,0.0003627285,0.0013622213],"category_scores_gemma":[0.00019529121,0.00025252762,0.0003075472,0.0002563621,0.00024751772,0.000052125964,0.0000944894,0.00041413226,0.0002692911],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016220797,0.00020279876,0.040398266,0.00011558253,0.00013687841,0.0009560177,0.00012672406,0.0000018828258,0.9566002,0.00015927685,0.00062320766,0.0005169477],"study_design_scores_gemma":[0.0012907609,0.00013310046,0.0044507375,0.0000740945,0.00023354332,0.00013497379,0.0003849571,0.000009428999,0.9667804,0.00009713369,0.026152879,0.00025799626],"about_ca_topic_score_codex":0.000112295624,"about_ca_topic_score_gemma":0.00011001307,"teacher_disagreement_score":0.035947528,"about_ca_system_score_codex":0.00013678437,"about_ca_system_score_gemma":0.00052652566,"threshold_uncertainty_score":0.99999267},"labels":[],"label_agreement":null},{"id":"W3165095179","doi":"10.1111/myc.13324","title":"Anti‐fungal agents in the treatment of chronic pulmonary aspergillosis: Systematic review and a network meta‐analysis","year":2021,"lang":"en","type":"review","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Itraconazole; Meta-analysis; Voriconazole; Observational study; Randomized controlled trial; Internal medicine; Aspergillosis; Intensive care medicine; Antifungal; Dermatology; Immunology","score_opus":0.12336979294277524,"score_gpt":0.3865254392371729,"score_spread":0.2631556462943977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165095179","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000032309024,0.9963393,0.0000018627505,0.000061132065,0.000026763008,0.0032612374,0.000057697864,0.000010337139,0.00020933677],"genre_scores_gemma":[0.0015011407,0.9969602,0.000019455325,0.00014981773,0.000071359376,0.0006403952,0.00017316396,0.000024560497,0.00045988106],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9963861,0.0011394231,0.0012620571,0.00053018105,0.00038544388,0.00029677973],"domain_scores_gemma":[0.9976625,0.0005777005,0.00049574696,0.0011184276,0.00007433694,0.00007131341],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008700561,0.00047659758,0.0114357285,0.00014235219,0.000058150268,0.000020353242,0.00018606748,0.00016188424,0.00022641876],"category_scores_gemma":[0.00012854805,0.00022654135,0.0032766457,0.001470797,0.00007477991,0.000033796674,0.000035065263,0.0001786234,0.000009921666],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000027578608,0.0005044553,0.00034909963,0.90223575,0.090658404,0.0003158522,0.000033055374,7.7197575e-7,4.384753e-8,0.00001651452,0.00012238175,0.005760944],"study_design_scores_gemma":[0.000076413,0.00016767642,0.00028770068,0.19711006,0.76788646,0.00007653375,0.000033559616,0.0000050565977,1.3862649e-7,0.0000019483489,0.034198347,0.00015613367],"about_ca_topic_score_codex":0.000054156397,"about_ca_topic_score_gemma":0.00012765516,"teacher_disagreement_score":0.7051257,"about_ca_system_score_codex":0.00020740363,"about_ca_system_score_gemma":0.00025449935,"threshold_uncertainty_score":0.9238088},"labels":[],"label_agreement":null},{"id":"W3167680729","doi":"10.3390/pathogens10060701","title":"Genome-Wide Association Analysis for Triazole Resistance in Aspergillus fumigatus","year":2021,"lang":"en","type":"article","venue":"Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Michael G. DeGroote Institute for Infectious Disease Research, McMaster University; McMaster University","keywords":"Aspergillus fumigatus; Aspergillus; Biology; Genome-wide association study; Computational biology; Triazole; Microbiology; Genetics; Gene; Chemistry; Genotype; Single-nucleotide polymorphism","score_opus":0.020404209112464336,"score_gpt":0.2779799002789647,"score_spread":0.25757569116650036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3167680729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986496,0.002279622,0.0024038465,0.0015298565,0.00008790806,0.00033879213,0.00020275818,0.000029260545,0.0066319765],"genre_scores_gemma":[0.9867223,0.00019877075,0.0022858945,0.0005274578,0.000091475995,0.00003826186,0.00031390032,0.000014621559,0.009807301],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99852484,0.00008648497,0.00036906786,0.00039780713,0.00028483005,0.00033694244],"domain_scores_gemma":[0.9986709,0.00042385532,0.00011044275,0.00037869217,0.00031437722,0.00010174247],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068337866,0.00011826974,0.0004855816,0.00013141398,0.000071843555,0.000018027124,0.000052468044,0.00013186014,0.00016992728],"category_scores_gemma":[0.0028044872,0.00011776075,0.000372296,0.0010304302,0.000016905358,0.000046127392,0.000018994204,0.00013425994,0.000018373317],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028624252,0.00013556068,0.9605526,0.00007438302,0.00029178415,0.00008853027,0.00022559418,0.000019328167,0.0378643,0.00012651873,0.00022545442,0.00010970612],"study_design_scores_gemma":[0.0011462187,0.0000275845,0.9832227,0.000020251551,0.0005584458,4.2411293e-7,0.0002348876,0.000053571468,0.0029249126,0.00034422238,0.011346666,0.00012007986],"about_ca_topic_score_codex":0.000009173049,"about_ca_topic_score_gemma":0.00407456,"teacher_disagreement_score":0.034939386,"about_ca_system_score_codex":0.0004939259,"about_ca_system_score_gemma":0.00019839265,"threshold_uncertainty_score":0.48021442},"labels":[],"label_agreement":null},{"id":"W3169165326","doi":"10.3390/jof7060468","title":"Differential Proinflammatory Responses to Aspergillus fumigatus by Airway Epithelial Cells In Vitro Are Protease Dependent","year":2021,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Manchester Biomedical Research Centre; Simon Fraser University; National Centre for the Replacement, Refinement and Reduction of Animals in Research; Medical Research Council; National Institute for Health and Care Research","keywords":"Proteases; Aspergillus fumigatus; Proinflammatory cytokine; Microbiology; Biology; Protease; Cysteine protease; Cytokine; Immune system; Immunology; Inflammation; Enzyme; Biochemistry","score_opus":0.011056009518847828,"score_gpt":0.25703871606128215,"score_spread":0.24598270654243432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3169165326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961133,0.0015068937,0.00025980608,0.0010963711,0.00039421138,0.00037430946,0.000083448205,0.000010871235,0.00016080312],"genre_scores_gemma":[0.99492955,0.00015910625,0.00054968445,0.0002914604,0.00037942958,0.000007574748,0.0000046733317,0.000022839868,0.0036557065],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99777555,0.00021736445,0.0007128237,0.00025863177,0.000695397,0.00034022762],"domain_scores_gemma":[0.9985292,0.000113550814,0.00027368194,0.00030201898,0.00036895045,0.0004126066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045118408,0.00018805645,0.00057176105,0.00016356733,0.000052562253,0.000034449924,0.00012899915,0.00012320491,0.00034898598],"category_scores_gemma":[0.0005768728,0.00014933577,0.00025337422,0.00019338784,0.000039420167,0.000111968744,0.00005823258,0.00054496905,0.000043412536],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010177386,0.00050342357,0.019342408,0.00013138894,0.000056911857,0.0029759991,0.00021716011,0.0000029606783,0.959981,0.000004090125,0.002160338,0.0044469093],"study_design_scores_gemma":[0.0020037992,0.00036961175,0.108105585,0.00029994812,0.00007301814,0.00017242601,0.0004536361,0.000012507423,0.88530487,0.000024096547,0.0030287933,0.00015173462],"about_ca_topic_score_codex":0.000008785309,"about_ca_topic_score_gemma":0.000039255483,"teacher_disagreement_score":0.08876318,"about_ca_system_score_codex":0.00026138913,"about_ca_system_score_gemma":0.00063698174,"threshold_uncertainty_score":0.6089736},"labels":[],"label_agreement":null},{"id":"W3169991669","doi":"10.2147/idr.s316368","title":"Species Diversity and Antifungal Susceptibilities of Oral Yeasts from Patients with Head and Neck Cancer","year":2021,"lang":"en","type":"article","venue":"Infection and Drug Resistance","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Science Foundation of Hainan Province; National Natural Science Foundation of China","keywords":"Fluconazole; Ketoconazole; Itraconazole; Candida tropicalis; Microbiology; Flucytosine; Amphotericin B; Biology; Miconazole; Candida krusei; Cancer; Candida albicans; Antifungal; Genetics","score_opus":0.015729343903166996,"score_gpt":0.251036779260324,"score_spread":0.23530743535715698,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3169991669","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966899,0.0018022814,0.00003060952,0.00018098395,0.00007067826,0.00013293963,0.00007641163,0.000021277974,0.0009948746],"genre_scores_gemma":[0.9950158,0.0009541414,0.0002049668,0.00008363292,0.000025914142,0.000002105766,0.000016010408,0.0000070510723,0.0036903992],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99915534,0.00004259826,0.0001516133,0.00031690448,0.00020415198,0.00012937796],"domain_scores_gemma":[0.99938,0.000059817354,0.000067056426,0.00015726736,0.00023813467,0.000097743075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007428511,0.00012159048,0.00028626647,0.000034204393,0.00024771443,0.000020370288,0.0000163224,0.000049349113,0.00011824329],"category_scores_gemma":[0.000069078844,0.00010039374,0.000030232106,0.00011506712,0.00031396042,0.00014122509,0.00010652475,0.00010368597,5.113086e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071918743,0.000104823805,0.9962978,0.00022790117,0.000044556204,0.0000074638506,0.0008071239,2.0034182e-7,0.0007375861,0.00012638648,0.00028554542,0.0006414712],"study_design_scores_gemma":[0.0016046978,0.00006552516,0.99448097,0.00027796885,0.000066740366,0.0000010812992,0.00034717793,0.0000035382777,0.0015293363,0.00012378996,0.0013933561,0.00010580726],"about_ca_topic_score_codex":0.0013464246,"about_ca_topic_score_gemma":0.019945601,"teacher_disagreement_score":0.018599177,"about_ca_system_score_codex":0.00003709941,"about_ca_system_score_gemma":0.00005134903,"threshold_uncertainty_score":0.99793786},"labels":[],"label_agreement":null},{"id":"W3170140538","doi":"10.1093/genetics/iyab095","title":"Mitochondrial perturbation reduces susceptibility to xenobiotics through altered efflux in <i>Candida albicans</i>","year":2021,"lang":"en","type":"article","venue":"Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canada Research Chairs","keywords":"Geldanamycin; Biology; Efflux; Candida albicans; Hsp90; Corpus albicans; Mutant; Cell biology; Genetics; ATP-binding cassette transporter; Gene; Heat shock protein; Transporter","score_opus":0.024073817797060987,"score_gpt":0.3090020295902294,"score_spread":0.2849282117931684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3170140538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920174,0.0005363567,0.0011251386,0.0020643924,0.0006811026,0.00051279005,0.00003216639,0.00003757646,0.0029930745],"genre_scores_gemma":[0.97897273,0.00020458961,0.016454294,0.0015550693,0.0006200374,0.0000106492835,0.00008359877,0.000025213309,0.002073803],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99798286,0.00011131576,0.00047609463,0.00060888607,0.0004221833,0.0003986346],"domain_scores_gemma":[0.9986617,0.00009854559,0.000057879042,0.0006870253,0.00031044646,0.0001843873],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016813984,0.00020002997,0.00039748897,0.000048416452,0.000068945716,0.000036912617,0.00011617012,0.00018746179,0.00036789937],"category_scores_gemma":[0.00059362757,0.0001930441,0.00012227231,0.00046095488,0.0001064817,0.00005346362,0.00007862032,0.00026653198,0.00006067741],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006735429,0.0007436058,0.23231773,0.00022246913,0.000058379257,0.00007836697,0.0027648513,0.00018467459,0.74798125,0.00021769537,0.009851334,0.004906122],"study_design_scores_gemma":[0.0033563683,0.0008295206,0.43659398,0.0002844756,0.00015617802,0.000038729435,0.0019420463,0.00027123198,0.51803225,0.0024723758,0.035421584,0.00060125405],"about_ca_topic_score_codex":0.0000472084,"about_ca_topic_score_gemma":0.0016086577,"teacher_disagreement_score":0.22994897,"about_ca_system_score_codex":0.00021433692,"about_ca_system_score_gemma":0.0004747476,"threshold_uncertainty_score":0.787211},"labels":[],"label_agreement":null},{"id":"W3170623892","doi":"10.1016/s2666-5247(21)00148-8","title":"Mucormycosis: time to address this deadly fungal infection","year":2021,"lang":"en","type":"article","venue":"The Lancet Microbe","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Mucormycosis; Outbreak; Medicine; Incidence (geometry); Disease; Zygomycosis; Epidemiology; Intensive care medicine; Dermatology; Surgery; Internal medicine; Pathology; Antifungal; Amphotericin B","score_opus":0.02586172913326033,"score_gpt":0.289117528661446,"score_spread":0.2632557995281857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3170623892","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9528643,0.0008029675,0.00014046385,0.00773078,0.00015072597,0.0002910163,0.000032123724,0.00012624882,0.037861384],"genre_scores_gemma":[0.94821084,0.00015641212,0.00045563208,0.009749599,0.0007282637,0.000019067274,0.000034219578,0.000022848812,0.040623114],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99898213,0.00008792429,0.00017705347,0.00026918628,0.00016670734,0.0003169742],"domain_scores_gemma":[0.9990174,0.0000661166,0.00003857587,0.00061619526,0.00016499306,0.00009669521],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003414931,0.00012628651,0.00033505008,0.00002853808,0.00012774614,0.00003583136,0.00010702907,0.00007565905,0.0037034396],"category_scores_gemma":[0.00021181627,0.00008740997,0.00011295242,0.00028070158,0.0000491383,0.000053821273,0.000102696555,0.0002575941,0.0038550906],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053224,0.00016766992,0.076947056,0.00013123079,0.00010207642,0.00009049828,0.00047715422,0.0000038145818,0.5958913,0.00013209849,0.3192428,0.0062820683],"study_design_scores_gemma":[0.0011876441,0.00016088839,0.432329,0.0002815787,0.00016114833,0.00018884003,0.00006495995,0.000031286752,0.12661813,0.00009804161,0.4386415,0.00023699459],"about_ca_topic_score_codex":0.000068280286,"about_ca_topic_score_gemma":0.00013626154,"teacher_disagreement_score":0.46927318,"about_ca_system_score_codex":0.000081976126,"about_ca_system_score_gemma":0.000114834,"threshold_uncertainty_score":0.9972073},"labels":[],"label_agreement":null},{"id":"W3170713734","doi":"10.1101/2021.06.03.446912","title":"An Alanine Aminotransferase is Required for Polysaccharide Regulation and Resistance of <i>Aspergillus fumigatus</i> Biofilms to Echinocandin Treatment","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Institute of Infection and Immunity; McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases; Dartmouth College; National Institutes of Health; Cystic Fibrosis Foundation","keywords":"Echinocandin; Aspergillus fumigatus; Biofilm; Microbiology; Biology; Antifungal drug; Polysaccharide; Aspergillus; Antifungal; Biochemistry; Bacteria; Fluconazole","score_opus":0.01932058748773763,"score_gpt":0.2611807377570185,"score_spread":0.24186015026928087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3170713734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907446,0.0017706888,0.00336315,0.0006627069,0.0002591976,0.0018965029,0.0011600949,0.00013667035,0.000006399461],"genre_scores_gemma":[0.9804395,0.00050786877,0.018130464,0.00034900656,0.00022240724,0.0001875091,0.0000072189823,0.00010414589,0.00005188945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99687093,0.00009465114,0.00077918364,0.0013619852,0.00040630536,0.00048694195],"domain_scores_gemma":[0.9967874,0.00007549896,0.00025872854,0.001642636,0.000713759,0.0005219194],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000443104,0.00057324005,0.0011205262,0.00022492924,0.00014309703,0.00009379021,0.00019078409,0.00048673755,0.00004741199],"category_scores_gemma":[0.00017202752,0.0005552309,0.00025443567,0.0004088395,0.00014631466,0.00015369007,0.000076191674,0.00024558813,0.0000023063944],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00124331,0.00036638757,0.026667552,0.0010949771,0.00021739202,0.00003842416,0.00011059735,0.0000049087053,0.969828,0.00028528474,0.0001328328,0.0000103271395],"study_design_scores_gemma":[0.0014361322,0.00052698056,0.23395103,0.0008715561,0.0003930029,3.2675285e-8,0.000021223374,0.00010664091,0.7616706,0.0000035786527,0.00057260215,0.00044662014],"about_ca_topic_score_codex":0.00018699405,"about_ca_topic_score_gemma":0.0001531466,"teacher_disagreement_score":0.2081574,"about_ca_system_score_codex":0.0004181349,"about_ca_system_score_gemma":0.000757236,"threshold_uncertainty_score":0.99968994},"labels":[],"label_agreement":null},{"id":"W3171197651","doi":"10.1101/2021.06.01.446547","title":"The catheterized bladder environment promotes Efg1- and Als1-dependent <i>Candida albicans</i> infection","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research; University of Notre Dame; Canadian Institute for Advanced Research","keywords":"Candida albicans; Biofilm; Microbiology; Virulence; Corpus albicans; Biology; Bacterial adhesin; Immunology; Bacteria; Genetics","score_opus":0.01052568286562875,"score_gpt":0.21918218540120224,"score_spread":0.2086565025355735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3171197651","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99305344,0.003782128,0.00058125216,0.0006277278,0.00050252344,0.0012104698,0.000067274894,0.00015641256,0.000018777253],"genre_scores_gemma":[0.99316823,0.0053516114,0.000543201,0.00025076472,0.0002844801,0.00024893336,0.0000012208762,0.00009022823,0.0000613349],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9970265,0.00021010618,0.00055950694,0.0010929835,0.0005815204,0.00052939914],"domain_scores_gemma":[0.99753946,0.00011390025,0.00030240047,0.0014889756,0.00022972508,0.00032556354],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00083142007,0.0005223664,0.0006711606,0.00007856131,0.00036386034,0.00028993253,0.00018258771,0.00045458472,0.00013301421],"category_scores_gemma":[0.00025394987,0.00040970926,0.00020057015,0.0001444579,0.00033322955,0.00009703051,0.00045390963,0.0009080742,0.000027220489],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022596444,0.0003775667,0.09516954,0.000603859,0.0005453998,0.0001281886,0.00004083894,0.0000047841854,0.90267444,0.000055495988,0.00014429171,0.000029651435],"study_design_scores_gemma":[0.0013527956,0.00021282595,0.7577985,0.0005404013,0.00062167866,2.2470968e-7,0.000020628579,0.00010203755,0.22807662,0.00000310832,0.010534431,0.0007367585],"about_ca_topic_score_codex":0.00021838912,"about_ca_topic_score_gemma":0.000040592182,"teacher_disagreement_score":0.6745978,"about_ca_system_score_codex":0.00034152588,"about_ca_system_score_gemma":0.000535897,"threshold_uncertainty_score":0.9998355},"labels":[],"label_agreement":null},{"id":"W3173555825","doi":"10.1038/s41429-021-00431-4","title":"Antifungal susceptibilities of opportunistic filamentous fungal pathogens from the Asia and Western Pacific Region: data from the SENTRY Antifungal Surveillance Program (2011–2019)","year":2021,"lang":"en","type":"article","venue":"The Journal of Antibiotics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Center, University of Rochester; Allergan; National Institutes of Health; Shionogi; Astellas Pharma; North Bristol NHS Trust; University of Queensland; Amplyx; Cidara Therapeutics; Tufts Medical Center; National University of Singapore; Université de Sherbrooke; Medpace; GlaxoSmithKline; Nabriva Therapeutics; Wayne State University; Meiji Seika Pharma; Pfizer; Beth Israel Deaconess Medical Center; University of Texas Southwestern Medical Center","keywords":"Posaconazole; Voriconazole; Aspergillus fumigatus; Itraconazole; Aspergillus; Microbiology; Biology; Aspergillosis; Mucorales; Antifungal; Medicine; Mucormycosis; Botany","score_opus":0.06081701439678184,"score_gpt":0.3029981679086222,"score_spread":0.24218115351184039,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3173555825","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98402476,0.007844358,0.0003280807,0.0048975693,0.00063551945,0.00047166448,0.0015357292,0.000024304076,0.00023802787],"genre_scores_gemma":[0.9894881,0.0075456663,0.00051628554,0.00030472054,0.00081550976,7.2063024e-8,0.00028942953,0.00003923157,0.0010009371],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9960825,0.0008921696,0.001148756,0.0004604177,0.0009521516,0.00046400147],"domain_scores_gemma":[0.9933821,0.0023817949,0.0009105369,0.0023898785,0.00073265046,0.00020303443],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021402729,0.00036280233,0.00088806584,0.00003519578,0.00035175183,0.00015125729,0.0009475794,0.0001840359,0.00020886837],"category_scores_gemma":[0.00095374486,0.00018367893,0.00023888814,0.00023566776,0.0012246694,0.00020605928,0.0004787578,0.0008954753,0.000014960678],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001008826,0.0005308127,0.9424197,0.000112127425,0.0005669573,0.00064205687,0.000995522,0.0000027742522,0.02162405,0.000052364438,0.029189898,0.0028549146],"study_design_scores_gemma":[0.0011830524,0.0005689162,0.9750435,0.0005746048,0.0009181034,0.00092612574,0.013069224,0.00033383697,0.002793892,0.00016199678,0.004179588,0.0002471619],"about_ca_topic_score_codex":0.00016152229,"about_ca_topic_score_gemma":0.00046774285,"teacher_disagreement_score":0.0326238,"about_ca_system_score_codex":0.00004618632,"about_ca_system_score_gemma":0.00060053106,"threshold_uncertainty_score":0.74902093},"labels":[],"label_agreement":null},{"id":"W3174895411","doi":"10.51643/22562915.362","title":"Infección por Rhodotorula mucilaginosa en trasplante alogénico de progenitores hematopoyéticos, reporte de un caso.","year":2018,"lang":"es","type":"article","venue":"Revista Colombiana de Hematología y Oncología","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Misericordia Community Hospital","funders":"","keywords":"Medicine","score_opus":0.013626889053849414,"score_gpt":0.3155330610448521,"score_spread":0.3019061719910027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174895411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9752011,0.010280567,0.0014358567,0.003282874,0.00061024935,0.003056058,0.00025491396,0.0005952042,0.005283189],"genre_scores_gemma":[0.98514676,0.0031067939,0.005451857,0.00239163,0.0013912731,0.00031213753,0.00015235608,0.00022647319,0.0018207297],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.98801184,0.0024099376,0.0028344942,0.002097651,0.0010688852,0.0035771937],"domain_scores_gemma":[0.99113524,0.0020452167,0.0015718427,0.0024564746,0.00092310674,0.0018681012],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.006364414,0.0013888162,0.003389086,0.0004321611,0.0009558412,0.00044221806,0.0011624153,0.0021548802,0.0012195675],"category_scores_gemma":[0.008248054,0.0013685168,0.0010315537,0.0010630887,0.0022239292,0.00031682433,0.00045474872,0.0018631112,0.00074611965],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012977435,0.0022046254,0.898529,0.004593891,0.0011385545,0.018089002,0.0017229937,5.569292e-7,0.026751667,0.015335452,0.026169345,0.004167148],"study_design_scores_gemma":[0.0074359896,0.0062004616,0.5756207,0.0067087566,0.0052592955,0.048362937,0.003643485,0.0014702238,0.06867671,0.002893453,0.26990038,0.0038275742],"about_ca_topic_score_codex":0.00056810427,"about_ca_topic_score_gemma":0.00061112264,"teacher_disagreement_score":0.32290828,"about_ca_system_score_codex":0.003679512,"about_ca_system_score_gemma":0.007381697,"threshold_uncertainty_score":0.9998862},"labels":[],"label_agreement":null},{"id":"W3176509544","doi":"10.1016/s2666-5247(21)00091-4","title":"Invasive mould disease in fatal COVID-19: a systematic review of autopsies","year":2021,"lang":"en","type":"review","venue":"The Lancet Microbe","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Centers for Disease Control and Prevention; National Institutes of Health; Merck; Astellas Pharma US","keywords":"Medicine; Autopsy; Mechanical ventilation; Disease; Diabetes mellitus; Cause of death; Coronavirus disease 2019 (COVID-19); Internal medicine; Infectious disease (medical specialty)","score_opus":0.09714553909415505,"score_gpt":0.39779720714836775,"score_spread":0.30065166805421273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3176509544","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000020041593,0.994856,0.000013400794,0.0010386243,0.00006199308,0.0034432707,0.00034005646,0.00002913533,0.0001974519],"genre_scores_gemma":[0.000041647665,0.9935352,0.00004567965,0.004577115,0.000115300034,0.00022854061,0.0003500841,0.00003298939,0.0010734412],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9969045,0.00081227574,0.0012257204,0.0004252601,0.0003087682,0.00032349577],"domain_scores_gemma":[0.99658245,0.00085262273,0.00061995874,0.0016162492,0.00011460092,0.0002141357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013918236,0.00037329752,0.005966259,0.00008261668,0.000045021796,0.000015908285,0.00046553975,0.00014685158,0.0002213846],"category_scores_gemma":[0.008031955,0.00020723039,0.0008577403,0.00052800466,0.0001948534,0.000034191806,0.00020737726,0.0005629985,0.0000554854],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022094466,0.000067841,0.000091937574,0.9929679,0.00017718137,0.00025885183,0.00009764011,7.73208e-8,0.000003952562,0.00017176435,0.0053748153,0.0007659325],"study_design_scores_gemma":[0.00022891603,0.000015434709,0.000020109675,0.8266577,0.0031914592,0.00005583368,0.000052023584,2.85947e-7,0.000001911698,0.000020810892,0.1695945,0.00016098739],"about_ca_topic_score_codex":0.00005179169,"about_ca_topic_score_gemma":0.00008161821,"teacher_disagreement_score":0.16631018,"about_ca_system_score_codex":0.0003195869,"about_ca_system_score_gemma":0.0026948943,"threshold_uncertainty_score":0.96155804},"labels":[],"label_agreement":null},{"id":"W3176744059","doi":"10.1093/jpids/piab036","title":"Prospective Evaluation of Galactomannan and (1→3) β-<scp>d</scp>-Glucan Assays as Diagnostic Tools for Invasive Fungal Disease in Children, Adolescents, and Young Adults With Acute Myeloid Leukemia Receiving Fungal Prophylaxis","year":2021,"lang":"en","type":"article","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Cancer Institute; National Institutes of Health; Children’s Oncology Group","keywords":"Medicine; Caspofungin; Galactomannan; Neutropenia; Aspergillosis; Internal medicine; Context (archaeology); Fluconazole; Febrile neutropenia; Immunology; Antifungal; Chemotherapy; Biology","score_opus":0.006879957002369452,"score_gpt":0.24372130527662067,"score_spread":0.2368413482742512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3176744059","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927873,0.0050661624,0.00004566132,0.000059080852,0.00014762094,0.0017029387,0.00014145255,0.000014410676,0.000035369896],"genre_scores_gemma":[0.9950995,0.0042397687,0.000054452426,0.00007040123,0.00039653317,0.000059880545,0.000014806438,0.000030119705,0.000034560893],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975951,0.00025326142,0.0005477546,0.0003836956,0.0009010214,0.00031921867],"domain_scores_gemma":[0.9962486,0.00098494,0.0006826632,0.00026767998,0.0014871237,0.00032897797],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0007086644,0.00026283448,0.0005137082,0.000086437365,0.0002249813,0.00008175641,0.00010000766,0.000121904195,0.0000048399866],"category_scores_gemma":[0.012602814,0.0001850564,0.00039919937,0.00055949437,0.00018071033,0.0004104974,0.000090498244,0.00048116047,3.2097188e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005935368,0.00051916414,0.9955676,0.0007689173,0.00034070772,0.000035119123,0.0010922335,0.00006515296,0.0001263612,0.0000075970834,0.0002404942,0.0006431248],"study_design_scores_gemma":[0.005821626,0.0009036292,0.98677576,0.0006022474,0.0035092146,0.0005364975,0.001124319,0.00014040945,0.0001260298,0.00034449573,9.4965367e-7,0.000114826275],"about_ca_topic_score_codex":0.000046970046,"about_ca_topic_score_gemma":0.00012456061,"teacher_disagreement_score":0.011894149,"about_ca_system_score_codex":0.0007266309,"about_ca_system_score_gemma":0.003325296,"threshold_uncertainty_score":0.9957144},"labels":[],"label_agreement":null},{"id":"W3176896253","doi":"10.3138/jammi-2021-0006","title":"The first described case of <i>Lodderomyces elongisporus</i> meningitis","year":2021,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"St Joseph's Health Centre; London Health Sciences Centre; Western University","funders":"","keywords":"Meningitis; Medicine; Fungemia; Fluconazole; Amphotericin B; Candida parapsilosis; Hydrocephalus; Gynecology; Pediatrics; Surgery; Antifungal; Mycosis; Dermatology","score_opus":0.004187730991239715,"score_gpt":0.22186585642645795,"score_spread":0.21767812543521825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3176896253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9798864,0.0026869257,0.0000102950635,0.016746158,0.00045933708,0.00006019785,0.000042433603,0.0000016597171,0.00010659764],"genre_scores_gemma":[0.9980102,0.0007276848,0.0000053364397,0.00097500754,0.000070568516,6.7090645e-7,0.0000031713053,0.0000035345845,0.00020378538],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988948,0.00017213599,0.00046877674,0.0000775934,0.00025488183,0.00013182277],"domain_scores_gemma":[0.9979542,0.0006299422,0.000605848,0.00012854245,0.000519749,0.00016175398],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008361802,0.00006889438,0.00028659325,0.000017174745,0.00018549217,0.0000059012928,0.00009177466,0.00010522615,0.00006213848],"category_scores_gemma":[0.0043252367,0.000038876457,0.00014488895,0.00011809733,0.00016483871,0.000027859487,0.00004366001,0.00027269157,9.454139e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024278056,0.00014544361,0.9460505,0.00013888856,0.0005313139,0.0008438807,0.00008520533,0.0000033318377,0.0033497103,0.00027086027,0.047120817,0.0012172562],"study_design_scores_gemma":[0.0050353855,0.00036982447,0.8826351,0.0008629451,0.0011719171,0.006980573,0.0010709962,0.000032195843,0.01299562,0.00061452325,0.088027164,0.00020375686],"about_ca_topic_score_codex":0.009222574,"about_ca_topic_score_gemma":0.31777585,"teacher_disagreement_score":0.30855328,"about_ca_system_score_codex":0.00020894737,"about_ca_system_score_gemma":0.0024736265,"threshold_uncertainty_score":0.9973751},"labels":[],"label_agreement":null},{"id":"W3178906926","doi":"10.1101/2021.07.08.451577","title":"Citizen-science surveillance of triazole-resistant <i>Aspergillus fumigatus</i> in UK residential garden soils","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Natural Environment Research Council; Sight Research UK; Canadian Institute for Advanced Research","keywords":"Aspergillus fumigatus; Compost; Tebuconazole; Spore; Biology; Microbiology; Horticulture; Fungicide; Agronomy","score_opus":0.013492585282554417,"score_gpt":0.24556073977266848,"score_spread":0.23206815449011406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3178906926","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99304426,0.003965138,0.00014746278,0.0002597136,0.0010842182,0.00096995843,0.00021133832,0.0001376468,0.00018028829],"genre_scores_gemma":[0.99700975,0.0009826352,0.0013312849,0.000155047,0.00032662108,0.00006652971,0.0000012785533,0.000095705815,0.00003114741],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9938758,0.00026557283,0.0014817498,0.0018243142,0.001533937,0.0010186038],"domain_scores_gemma":[0.99481946,0.00016532466,0.0006718116,0.0025433223,0.0013191728,0.00048090826],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0027352795,0.00067208335,0.0017364321,0.0005703583,0.00016095869,0.00018872126,0.00081225135,0.00064393046,0.00016412139],"category_scores_gemma":[0.0019923225,0.00069947075,0.00042402415,0.0016466322,0.0009271411,0.00015930251,0.000746481,0.0012672142,0.000015650194],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081660773,0.00026223753,0.101332,0.0010514901,0.00009968136,0.0004621944,0.000033324577,0.000021993214,0.8955913,0.0001423056,0.00018508722,0.0000017695992],"study_design_scores_gemma":[0.0015129261,0.000093357805,0.6696057,0.0013782079,0.00008315553,5.001157e-8,0.000037554666,0.00007264183,0.32651433,0.0000020720495,0.00017298691,0.0005270698],"about_ca_topic_score_codex":0.00040342903,"about_ca_topic_score_gemma":0.0002657653,"teacher_disagreement_score":0.56907696,"about_ca_system_score_codex":0.0007771504,"about_ca_system_score_gemma":0.0054524136,"threshold_uncertainty_score":0.99954563},"labels":[],"label_agreement":null},{"id":"W3179219075","doi":"10.1371/journal.ppat.1009661","title":"Respiring to infect: Emerging links between mitochondria, the electron transport chain, and fungal pathogenesis","year":2021,"lang":"en","type":"review","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Institute of Infection and Immunity; Canadian Institutes of Health Research; National Research Foundation of Korea; Ministry of Science, ICT and Future Planning; National Research Foundation; Canadian Institute for Advanced Research; Burroughs Wellcome Fund","keywords":"Cryptococcus neoformans; Aspergillus fumigatus; Biology; Candida albicans; Microbiology; Antifungal drug; Cryptococcosis; Virulence; Aspergillosis; Disease; Fungus; Population; Mitochondrion; Immunology; Medicine; Gene; Pathology; Cell biology; Genetics","score_opus":0.0543793410253259,"score_gpt":0.3385580104094412,"score_spread":0.28417866938411535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3179219075","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.043828502,0.9527597,0.00015161648,0.00028982625,0.00013895432,0.0020911198,0.00028973044,0.00010851845,0.00034202912],"genre_scores_gemma":[0.004295881,0.9922378,0.00035680892,0.00030646496,0.001294492,0.00026741222,0.00029371277,0.00016743361,0.0007800127],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9957978,0.00037594678,0.00107863,0.0012119617,0.0006799291,0.00085573],"domain_scores_gemma":[0.9973797,0.00045647877,0.00026226803,0.0012170858,0.0002276968,0.0004567445],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00079750764,0.00074993126,0.0029057628,0.00025997325,0.00033339928,0.00005299741,0.00028184106,0.00080977415,0.00007396548],"category_scores_gemma":[0.00053971994,0.0005268598,0.0009752331,0.000886798,0.000097733595,0.00006206435,0.00012827596,0.0015425887,0.00005157197],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053400094,0.00019800021,0.03664151,0.019801933,0.0011482387,0.0007957683,0.0005495835,5.1735424e-7,0.0034900534,0.0000479347,0.00023629064,0.93703675],"study_design_scores_gemma":[0.00039073118,0.00040989261,0.025216682,0.019968294,0.008706643,0.00010716222,0.00012562923,0.0000023992354,0.0002570977,0.000009656294,0.94383574,0.0009700583],"about_ca_topic_score_codex":0.000015501324,"about_ca_topic_score_gemma":0.00008342818,"teacher_disagreement_score":0.94359946,"about_ca_system_score_codex":0.00020641813,"about_ca_system_score_gemma":0.00066291314,"threshold_uncertainty_score":0.9997183},"labels":[],"label_agreement":null},{"id":"W3179640952","doi":"10.3389/fimmu.2021.675294","title":"The IL-1 Receptor Is Required to Maintain Neutrophil Viability and Function During Aspergillus fumigatus Airway Infection","year":2021,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Christie (Canada); McGill University; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research","keywords":"Aspergillus fumigatus; Immunology; Lung; Pathogenesis; Medicine; Biology; Internal medicine","score_opus":0.007223331889753273,"score_gpt":0.23175113808384934,"score_spread":0.22452780619409607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3179640952","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892015,0.0024001298,0.0016485781,0.003970688,0.001913246,0.00035231034,0.000008828378,0.000047506637,0.0004572354],"genre_scores_gemma":[0.99510735,0.0015176123,0.00076502055,0.00029822887,0.0000990179,0.000038918137,0.000013803485,0.00001682969,0.002143195],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99842507,0.00023864183,0.00034041278,0.00047602286,0.00013256469,0.00038727146],"domain_scores_gemma":[0.9991168,0.00006415289,0.00005781182,0.0005400053,0.0001414662,0.000079780424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040583414,0.00015601506,0.00033753054,0.00009884417,0.00026966227,0.000023661034,0.00006217256,0.00020899404,0.00008128412],"category_scores_gemma":[0.0005763688,0.00012878557,0.00008636832,0.00038230064,0.0002844271,0.00009512835,0.00010326031,0.00037755223,0.000023662415],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005589237,0.00019543528,0.77883327,0.00012321588,0.00023564226,0.000043862507,0.00069832685,0.0000074036648,0.17011254,0.0006522532,0.0049986965,0.038510147],"study_design_scores_gemma":[0.0011731541,0.00038973888,0.9436269,0.000047653648,0.000037269852,0.000025105517,0.0011908255,0.000030680203,0.014807206,0.0013721602,0.037158515,0.00014079628],"about_ca_topic_score_codex":0.00011013612,"about_ca_topic_score_gemma":0.0002548154,"teacher_disagreement_score":0.16479366,"about_ca_system_score_codex":0.00044397876,"about_ca_system_score_gemma":0.00012586381,"threshold_uncertainty_score":0.5251723},"labels":[],"label_agreement":null},{"id":"W3179759870","doi":"10.1139/cjm-2020-0215","title":"Where the infection is isolated rather than the specific species correlates with adherence strength, whereas biofilm density remains static in clinically isolated <i>Candida</i> and arthroconidial yeasts","year":2021,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Common Fund; National Institute of General Medical Sciences; Qatar National Research Fund; National Institutes of Health; Carnegie Mellon University; Fonds National de la Recherche Luxembourg; Qatar Foundation","keywords":"Biofilm; Microbiology; Biology; Host (biology); Trichosporon; Yeast; Bacteria; Ecology","score_opus":0.01349892403110933,"score_gpt":0.23598765431848184,"score_spread":0.2224887302873725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3179759870","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99296093,0.0032785127,0.00010535609,0.0029172925,0.00024278295,0.00020964886,0.00003353462,0.000004365984,0.00024756356],"genre_scores_gemma":[0.9965809,0.0018049798,0.000054288168,0.00077981094,0.00009787604,0.0000011018194,0.00000980886,0.000013453741,0.00065778295],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99853766,0.00032016195,0.0005194074,0.00023276095,0.000060599097,0.00032943918],"domain_scores_gemma":[0.998645,0.00025106862,0.00026558578,0.00025753048,0.00036001403,0.00022081808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048320365,0.0001692821,0.00040986427,0.00007887629,0.00017234641,0.00004862603,0.00010536363,0.00017962506,0.00047367904],"category_scores_gemma":[0.0001252247,0.00009426892,0.000094567775,0.00028633783,0.0006504989,0.00006389726,0.000015902693,0.00073258264,0.000013980203],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009463043,0.000051382474,0.9607295,0.000027771037,0.00015185865,0.00058965676,0.0016344887,0.0000036643744,0.03013671,0.00006119058,0.0046787546,0.0009887454],"study_design_scores_gemma":[0.0040769526,0.0030547348,0.95008683,0.0011043793,0.00023352994,0.005969689,0.0042486577,0.000056423425,0.002529877,0.00023270436,0.028045436,0.0003607738],"about_ca_topic_score_codex":0.0016872652,"about_ca_topic_score_gemma":0.43907037,"teacher_disagreement_score":0.43738312,"about_ca_system_score_codex":0.00012154745,"about_ca_system_score_gemma":0.0015456746,"threshold_uncertainty_score":0.57116514},"labels":[],"label_agreement":null},{"id":"W3181051881","doi":"10.1016/j.idcr.2021.e01225","title":"Nosocomial mucormycosis of the thigh","year":2021,"lang":"en","type":"article","venue":"IDCases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; University of Manitoba","funders":"","keywords":"Medicine; Mucormycosis; Acute respiratory distress; Thigh; Respiratory distress; Intensive care medicine; Surgery; Lung; Internal medicine","score_opus":0.014362999760386599,"score_gpt":0.2652131459216233,"score_spread":0.25085014616123674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3181051881","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873127,0.0005155254,0.000019114623,0.0011705995,0.00013921372,0.00007645192,0.000013315215,0.000012305692,0.010740771],"genre_scores_gemma":[0.9972279,0.000036245423,0.00012370052,0.0004989857,0.00008026214,0.0000021603994,0.0000029322418,0.0000044373464,0.0020233572],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99949336,0.000029015062,0.00012302143,0.000106158644,0.00016287227,0.00008555387],"domain_scores_gemma":[0.99947965,0.00008470098,0.000032066397,0.00026522155,0.00010710217,0.000031269734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000055786728,0.00004781298,0.0001387138,0.000008101048,0.00004322763,0.000003912178,0.00004112846,0.000034688033,0.00042901322],"category_scores_gemma":[0.00037633916,0.00002896387,0.00012788418,0.00012660585,0.00007881426,0.000019764102,0.000038581264,0.000074505,0.000016103066],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014250295,0.00026129148,0.8858771,0.00012860086,0.000043203778,0.00009465502,0.00013261115,4.347149e-7,0.100864224,0.0009876164,0.007943603,0.00352419],"study_design_scores_gemma":[0.00031815073,0.00003966355,0.8210028,0.00007837578,0.00005231511,0.000027343927,0.00020392821,0.0000045893876,0.17340319,0.00015253958,0.004680583,0.000036522073],"about_ca_topic_score_codex":0.00004821996,"about_ca_topic_score_gemma":0.00013553046,"teacher_disagreement_score":0.072538964,"about_ca_system_score_codex":0.000015268937,"about_ca_system_score_gemma":0.00013753265,"threshold_uncertainty_score":0.4697394},"labels":[],"label_agreement":null},{"id":"W3184331741","doi":"10.1007/s00248-021-01804-w","title":"Genetic Diversity and Azole Resistance Among Natural Aspergillus fumigatus Populations in Yunnan, China","year":2021,"lang":"en","type":"article","venue":"Microbial Ecology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Department of Education of Guizhou Province; National Natural Science Foundation of China; McMaster University","keywords":"Biology; Aspergillus fumigatus; Biological dispersal; Resistance (ecology); China; Ecology; Azole; Zoology; Antifungal; Microbiology; Environmental health; Geography; Population","score_opus":0.014524893365219064,"score_gpt":0.24859438922002433,"score_spread":0.23406949585480527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3184331741","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969107,0.0009216422,0.00001350503,0.0008912075,0.00030211947,0.0001740755,0.000011648838,0.000021489785,0.000753603],"genre_scores_gemma":[0.9954335,0.00008310975,0.0007078924,0.00037174256,0.00005745192,0.0000024434307,0.000027682063,0.000008405709,0.0033077332],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989901,0.000081730395,0.00021581938,0.00035343412,0.000073129064,0.00028579542],"domain_scores_gemma":[0.9995504,0.00003007015,0.000045428227,0.0002148075,0.00007684833,0.000082421946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009663947,0.00011388644,0.0002942134,0.00006174101,0.0003131215,0.000008768998,0.00005847584,0.00014087105,0.00018339619],"category_scores_gemma":[0.00017290944,0.000116694006,0.00006289473,0.0001919491,0.00019871039,0.000057402274,0.00028493398,0.00027117567,0.000010572031],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015088661,0.00009455798,0.98186356,0.000050887615,0.000014337272,0.00036818985,0.000397468,0.0000047754947,0.015982836,0.00016963831,0.0007121021,0.00019073708],"study_design_scores_gemma":[0.0010274001,0.000034086785,0.9973128,0.000031502106,0.000034887336,0.000035204637,0.0000920965,0.00003315988,0.0005640519,0.00026463004,0.0004616355,0.00010856505],"about_ca_topic_score_codex":0.00027559148,"about_ca_topic_score_gemma":0.0787083,"teacher_disagreement_score":0.0784327,"about_ca_system_score_codex":0.00014755045,"about_ca_system_score_gemma":0.00009465943,"threshold_uncertainty_score":0.9381029},"labels":[],"label_agreement":null},{"id":"W3186791259","doi":"10.1016/j.jcf.2021.07.008","title":"Clinician variability in the diagnosis and treatment of aspergillus fumigatus-related conditions in cystic fibrosis: An international survey","year":2021,"lang":"en","type":"article","venue":"Journal of Cystic Fibrosis","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"National Heart, Lung, and Blood Institute","keywords":"Medicine; Cystic fibrosis; Itraconazole; Aspergillus; Aspergillus fumigatus; Disease; Bronchitis; Allergic bronchopulmonary aspergillosis; Internal medicine; Intensive care medicine; Immunology; Dermatology; Antifungal; Microbiology; Immunoglobulin E","score_opus":0.035568048708691215,"score_gpt":0.3375714706631304,"score_spread":0.3020034219544392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3186791259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99761647,0.0007978096,0.00006932473,0.0006596636,0.0002239477,0.00022044226,0.00020009573,0.0000041530934,0.00020806641],"genre_scores_gemma":[0.99789584,0.0007690446,0.0010523616,0.000077486344,0.00006582564,0.000017189534,0.00007717094,0.00001054721,0.000034564637],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969799,0.0010197461,0.0011546371,0.00024578877,0.0004094235,0.00019049196],"domain_scores_gemma":[0.9959725,0.0028131218,0.00034415047,0.00033983798,0.0004061336,0.00012426874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022409565,0.00015977513,0.00062639266,0.000165242,0.000047541744,0.000030134646,0.00013654283,0.00014035782,0.00025260742],"category_scores_gemma":[0.0037381847,0.00011061584,0.00018299822,0.00043932436,0.00017966008,0.00020287883,0.000022408332,0.0002636508,0.0000020122059],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093770796,0.0018439812,0.9908782,0.00006674222,0.00012094122,0.00015694721,0.001050057,0.000057101708,0.0019163263,0.00013121894,0.000054825887,0.002785926],"study_design_scores_gemma":[0.0022841452,0.0013424279,0.9928015,0.00048520212,0.0001856302,0.00009364584,0.0008180401,0.00023630829,0.0006757332,0.0007930133,0.00019456189,0.00008977573],"about_ca_topic_score_codex":0.00030603315,"about_ca_topic_score_gemma":0.0013818489,"teacher_disagreement_score":0.0026961502,"about_ca_system_score_codex":0.00024781885,"about_ca_system_score_gemma":0.000341155,"threshold_uncertainty_score":0.4510783},"labels":[],"label_agreement":null},{"id":"W3187145316","doi":"10.1093/jpids/piab024","title":"Comparative Effectiveness of Echinocandins vs Triazoles or Amphotericin B Formulations as Initial Directed Therapy for Invasive Candidiasis in Children and Adolescents","year":2021,"lang":"en","type":"article","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Echinocandin; Medicine; Echinocandins; Amphotericin B; Caspofungin; Internal medicine; Anidulafungin; Antifungal; Fluconazole; Dermatology","score_opus":0.015545657245135144,"score_gpt":0.3140895721172925,"score_spread":0.29854391487215737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3187145316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975096,0.0011496602,0.00019452983,0.00003417086,0.00013734339,0.00082719495,0.00012522576,0.000010297201,0.000011983787],"genre_scores_gemma":[0.9971538,0.0024102698,0.000054366094,0.00011280312,0.00022251923,0.000013143132,0.000014286709,0.000011469063,0.00000731323],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987455,0.0002634833,0.00042772433,0.0001550504,0.0002449291,0.00016331207],"domain_scores_gemma":[0.9982026,0.000700548,0.00039817113,0.0001408894,0.0004503909,0.000107381245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029161098,0.000147842,0.0005994662,0.00007219103,0.00014675585,0.000021596845,0.00007062807,0.000084033236,0.000011743812],"category_scores_gemma":[0.0006595405,0.00009267095,0.00051933946,0.00055017334,0.000090866444,0.00013297267,0.000034942805,0.00020833728,1.7742008e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038438225,0.00081295543,0.99319416,0.0003061208,0.00024372875,0.0000037147727,0.00072413497,0.00005167536,0.0005486991,0.000007735591,0.00013179886,0.00013142997],"study_design_scores_gemma":[0.008148957,0.0006350414,0.9878759,0.00020976727,0.0005482231,0.00015256615,0.000287137,0.00002880133,0.0016195741,0.0003989627,0.0000012397381,0.00009387737],"about_ca_topic_score_codex":0.00010584269,"about_ca_topic_score_gemma":0.00011445402,"teacher_disagreement_score":0.0053183315,"about_ca_system_score_codex":0.00019856493,"about_ca_system_score_gemma":0.0012218899,"threshold_uncertainty_score":0.37790114},"labels":[],"label_agreement":null},{"id":"W3188687095","doi":"10.1097/paf.0000000000000704","title":"Forensic Neuropathologic Phenotypes of Fungal Central Nervous System Infections","year":2021,"lang":"en","type":"article","venue":"American Journal of Forensic Medicine & Pathology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Regional Laboratory Medicine Program","funders":"","keywords":"Central nervous system; Aspergillosis; Biology; Autopsy; Dimorphic fungus; Immunodeficiency; Aspergillus; Differential diagnosis; Mycosis; Immunology; Medicine; Pathology; Immune system; Microbiology; Neuroscience","score_opus":0.013965780883876677,"score_gpt":0.2708373583172381,"score_spread":0.2568715774333614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3188687095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899947,0.001454855,0.003527014,0.0016557733,0.0014861906,0.00013878423,0.000009317361,0.000032115102,0.0017012444],"genre_scores_gemma":[0.99544054,0.00022678633,0.002614326,0.0008499222,0.00069429656,0.0000020195387,0.000010453802,0.000026993628,0.00013465728],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970384,0.0004545512,0.0011932084,0.00032684713,0.00049983145,0.00048713878],"domain_scores_gemma":[0.9966123,0.0003326962,0.0010551031,0.0005001173,0.001166967,0.0003328335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007007828,0.00025640638,0.0015785784,0.00025280478,0.0000796434,0.0000043487353,0.00013893562,0.00009502663,0.00010889875],"category_scores_gemma":[0.0015432274,0.00018145365,0.00034985488,0.0006874636,0.0019275908,0.00007055687,0.000050982733,0.00060184137,0.0000064621277],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016444277,0.0006323801,0.6675781,0.0005317114,0.00034178345,0.026967982,0.0020169502,0.000060910712,0.083197236,0.003011469,0.0031851775,0.21083187],"study_design_scores_gemma":[0.0025953648,0.013162261,0.90297675,0.0008382722,0.0010442738,0.0633198,0.009866425,0.000055499182,0.005015334,0.00033421587,0.0005647897,0.0002270356],"about_ca_topic_score_codex":0.000042816537,"about_ca_topic_score_gemma":0.00004787205,"teacher_disagreement_score":0.23539864,"about_ca_system_score_codex":0.00011812349,"about_ca_system_score_gemma":0.0005020513,"threshold_uncertainty_score":0.73994654},"labels":[],"label_agreement":null},{"id":"W3191474491","doi":"10.1128/aac.01093-21","title":"Etest ECVs/ECOFFs for Detection of Resistance in Prevalent and Three Nonprevalent <i>Candida</i> spp. to Triazoles and Amphotericin B and Aspergillus spp. to Caspofungin: Further Assessment of Modal Variability","year":2021,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Etest; Caspofungin; Candida parapsilosis; Microbiology; Biology; Candida krusei; Fluconazole; Posaconazole; Amphotericin B; Candida glabrata; Candida tropicalis; Candida albicans; Antifungal; Antibiotics","score_opus":0.013639769916662478,"score_gpt":0.2883868017863752,"score_spread":0.2747470318697127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3191474491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99338955,0.0003773876,0.0026830744,0.002187692,0.000056329773,0.0011322426,0.00010572984,0.000008119398,0.000059883885],"genre_scores_gemma":[0.9941397,0.0017075803,0.0026331192,0.0012799767,0.000037857597,0.000018934426,0.000008215564,0.000021964699,0.00015270348],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985459,0.000059165293,0.00045992906,0.00054286123,0.00015675614,0.00023542272],"domain_scores_gemma":[0.9992415,0.00010104274,0.00011155559,0.00026606527,0.00013787397,0.00014199864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005003741,0.00021139637,0.00058872066,0.00007143597,0.000057513338,0.000022804208,0.00004566686,0.00010207099,0.00003707699],"category_scores_gemma":[0.0000540406,0.00018757231,0.000066704306,0.00016915449,0.00011262091,0.00005885826,0.000053459993,0.000092316484,1.7607259e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002912707,0.0004909405,0.49202868,0.0018379801,0.000108563174,0.000009377191,0.0010651198,0.0000075918133,0.49214464,0.000027854761,0.00033345402,0.009033084],"study_design_scores_gemma":[0.0036831596,0.00047500464,0.91061556,0.00042804642,0.00007740538,0.000010240588,0.00014544648,0.00017505571,0.08268202,0.000114252274,0.0014044247,0.00018939472],"about_ca_topic_score_codex":0.0001482113,"about_ca_topic_score_gemma":0.0016557134,"teacher_disagreement_score":0.41858688,"about_ca_system_score_codex":0.00006124947,"about_ca_system_score_gemma":0.0000761547,"threshold_uncertainty_score":0.7648977},"labels":[],"label_agreement":null},{"id":"W3193617819","doi":"10.2139/ssrn.3877395","title":"Calcium-Dependent ESCRT Recruitment and Lysosome Exocytosis Maintain Epithelial Integrity During &lt;i&gt;Candida albicans&lt;/i&gt; Invasion","year":2021,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"ESCRT; Candida albicans; Exocytosis; Autophagy; Lysosome; Cell biology; Biguanide; Microbiology; Biology; Chemistry; Endosome; Biochemistry; Endocrinology; Secretion; Apoptosis","score_opus":0.030143304683827785,"score_gpt":0.2858464132623449,"score_spread":0.2557031085785171,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3193617819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98484564,0.009134452,0.0020964092,0.0023060883,0.00023980386,0.0005024797,0.000018737484,0.000052800875,0.0008035971],"genre_scores_gemma":[0.977264,0.01591717,0.00021696615,0.00024166913,0.0005065821,0.000026884481,0.00002197624,0.000048837832,0.0057559046],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9950382,0.00034618904,0.00071021775,0.00068923185,0.0008510877,0.0023650446],"domain_scores_gemma":[0.9983976,0.00011126547,0.00021935812,0.000503874,0.00029536794,0.00047257],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0024116898,0.00038548853,0.0006893546,0.00017454865,0.00049753475,0.000098069024,0.00020213457,0.00025738715,0.00037889546],"category_scores_gemma":[0.0004426839,0.0003244628,0.00031926742,0.0002980975,0.00017100689,0.00022515669,0.00015914987,0.0028756554,0.00003821257],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026500602,0.00078644743,0.065662764,0.00020972766,0.00086414354,0.0008810462,0.00053855625,0.0000052877745,0.87382174,0.03143639,0.00012945209,0.023014413],"study_design_scores_gemma":[0.023715675,0.004916981,0.5539285,0.0020047915,0.0018601322,0.019256694,0.010353028,0.0001976951,0.25869295,0.1083841,0.01425939,0.0024300837],"about_ca_topic_score_codex":0.00007038447,"about_ca_topic_score_gemma":0.0064818426,"teacher_disagreement_score":0.61512876,"about_ca_system_score_codex":0.0034644178,"about_ca_system_score_gemma":0.0041273674,"threshold_uncertainty_score":0.9999207},"labels":[],"label_agreement":null},{"id":"W3195242213","doi":"10.1093/emph/eoab021","title":"Emerging fungal pathogen: <i>Candida auris</i>","year":2021,"lang":"en","type":"article","venue":"Evolution Medicine and Public Health","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Candida auris; Fungal pathogen; Microbiology; Pathogen; Opportunistic pathogen; Biology; Antifungal; Virulence","score_opus":0.04390965036489284,"score_gpt":0.3357594353285318,"score_spread":0.29184978496363895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195242213","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61571145,0.048082698,0.01571697,0.3007157,0.00082711544,0.00051803066,0.000037754704,0.0002238855,0.018166412],"genre_scores_gemma":[0.9809162,0.0023458984,0.0004550243,0.013126874,0.00077937706,0.000008569415,0.00012528563,0.000016010274,0.0022267776],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9978418,0.00021018206,0.0004841164,0.00042982254,0.00047903453,0.00055506395],"domain_scores_gemma":[0.99833137,0.0000880033,0.00011149799,0.0003647235,0.00030531068,0.0007990854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013361009,0.000161054,0.00048034795,0.00012986972,0.0003037296,0.000015964191,0.00004615491,0.00009383442,0.0007112869],"category_scores_gemma":[0.0009058781,0.00012893588,0.00006753764,0.00056283583,0.00018434892,0.00013733096,0.000038518945,0.000328823,0.00002086636],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001117463,0.00034923002,0.74482834,0.0010021736,0.000084488995,0.00024386111,0.0027501336,3.8464552e-7,0.0041467054,0.013614878,0.15837175,0.07449633],"study_design_scores_gemma":[0.0024264075,0.00061961444,0.51553255,0.0003507044,0.000040830007,0.00041360085,0.00884625,0.00020427252,0.000027863094,0.000545907,0.47079453,0.00019750229],"about_ca_topic_score_codex":0.00034427803,"about_ca_topic_score_gemma":0.00026354386,"teacher_disagreement_score":0.36520475,"about_ca_system_score_codex":0.00022975515,"about_ca_system_score_gemma":0.0018274542,"threshold_uncertainty_score":0.77880925},"labels":[],"label_agreement":null},{"id":"W3195519228","doi":"10.1016/j.celrep.2021.109584","title":"The macrophage-derived protein PTMA induces filamentation of the human fungal pathogen Candida albicans","year":2021,"lang":"en","type":"article","venue":"Cell Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System; Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Canada Foundation for Innovation; Canada Research Chairs; Government of Ontario; Canadian Institutes of Health Research; Ontario Genomics; Genome Canada; Canadian Institute for Advanced Research","keywords":"Filamentation; Candida albicans; Macrophage; Corpus albicans; Biology; Internalization; Immune system; Microbiology; Lysis; Cell biology; Cell; Immunology; Biochemistry","score_opus":0.013929055643115069,"score_gpt":0.2646214305739778,"score_spread":0.2506923749308627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195519228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989027,0.00058683485,0.0000104752635,0.00031023263,0.00015244602,0.0005014311,0.000006258667,0.000012706139,0.009392587],"genre_scores_gemma":[0.9822297,0.000018550894,0.00005826011,0.00008846248,0.000063542255,0.000027194397,0.00001935233,0.000012894441,0.017482055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99865484,0.00010512589,0.00042078507,0.00026327465,0.0003729337,0.0001830137],"domain_scores_gemma":[0.99875534,0.00003937477,0.00028985227,0.0006611668,0.00018969379,0.00006460076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034798504,0.00010499225,0.00018586282,0.000011925817,0.00028805778,0.000023805786,0.0000691724,0.000067258836,0.00028404527],"category_scores_gemma":[0.00022715954,0.000060217226,0.00013593676,0.00015630864,0.00016711076,0.000033667133,0.00005749975,0.00017915889,0.000003382932],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021957858,0.000076215816,0.0793193,0.00007531763,0.000019461659,0.00052696664,0.00031334674,6.6156616e-7,0.9184,0.000022845432,0.00034382238,0.0008801457],"study_design_scores_gemma":[0.00015900099,0.00003859665,0.34329185,0.00005918687,0.000040766576,0.000052966112,0.0007403492,0.0000011682173,0.65394735,0.00015898173,0.001459588,0.000050190527],"about_ca_topic_score_codex":0.0001224996,"about_ca_topic_score_gemma":0.00035235556,"teacher_disagreement_score":0.2644526,"about_ca_system_score_codex":0.000061993465,"about_ca_system_score_gemma":0.0003661501,"threshold_uncertainty_score":0.31100965},"labels":[],"label_agreement":null},{"id":"W3196129919","doi":"10.1503/cmaj.211026","title":"Palatal mucormycosis in a patient with SARS-CoV-2 infection","year":2021,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Asymptomatic; Mucormycosis; Medicine; Lesion; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Emergency department; Type 2 Diabetes Mellitus; Coronavirus disease 2019 (COVID-19); Surgery; Diabetes mellitus; Pediatrics; Internal medicine; Disease; Infectious disease (medical specialty)","score_opus":0.009783121982795729,"score_gpt":0.2516579509647471,"score_spread":0.24187482898195134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196129919","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98515695,0.00008828376,0.000054271255,0.009829053,0.0001842905,0.00007519747,0.0000068181785,0.000009021434,0.0045960965],"genre_scores_gemma":[0.99215823,0.0001206153,0.00009063506,0.007257282,0.0002198137,0.0000036249128,0.000013900575,0.00000907102,0.00012684951],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99808544,0.00011402854,0.00033528035,0.00015453156,0.0009678924,0.00034284696],"domain_scores_gemma":[0.9987324,0.0000568942,0.000103553866,0.00009457193,0.00042327683,0.00058933574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062276656,0.000087073364,0.00021376339,0.00012763646,0.00010693689,0.00004015322,0.00003381806,0.00023213358,0.0008174302],"category_scores_gemma":[0.0016883827,0.00007227906,0.000076053926,0.0003811937,0.000024772426,0.000101140235,0.0000071052505,0.0008051501,0.00005171133],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034761917,0.000071707706,0.9703702,0.000012316408,0.000049504415,0.0047376375,0.00018497149,8.42999e-7,0.00022283649,0.000037622045,0.0076457355,0.016631866],"study_design_scores_gemma":[0.001316592,0.00016112892,0.9224888,0.00023817399,0.000029594394,0.0017397439,0.0002942636,0.000085741776,0.0008299489,0.0000510052,0.072651364,0.00011365343],"about_ca_topic_score_codex":0.0057494915,"about_ca_topic_score_gemma":0.37681723,"teacher_disagreement_score":0.37106773,"about_ca_system_score_codex":0.0015452261,"about_ca_system_score_gemma":0.004732386,"threshold_uncertainty_score":0.89502877},"labels":[],"label_agreement":null},{"id":"W3196177038","doi":"10.1016/j.mmcr.2021.08.004","title":"Successful management of Aspergillus infection of an open window thoracostomy with topical liposomal amphotericin B","year":2021,"lang":"en","type":"article","venue":"Medical Mycology Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Medicine; Aspergillus fumigatus; Thoracotomy; Thoracostomy; Amphotericin B; Surgery; Aspergillosis; Anesthesia; Dermatology; Antifungal; Immunology; Pneumothorax","score_opus":0.015669487792691537,"score_gpt":0.32863475737323383,"score_spread":0.31296526958054227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196177038","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99324715,0.00012619603,0.00048266028,0.0004035573,0.00019745233,0.0004523317,0.0000024876265,0.000021568945,0.0050666067],"genre_scores_gemma":[0.99727505,0.00008596048,0.001930452,0.00023250244,0.00006476192,0.00002442374,0.00003427408,0.000012515435,0.0003400621],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.99794286,0.000175362,0.0006607908,0.00045465407,0.00054350146,0.00022280889],"domain_scores_gemma":[0.9985503,0.000084156825,0.00024671722,0.0005938719,0.00023798102,0.0002870031],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006736123,0.00013502003,0.0006165334,0.00005547667,0.000054730564,0.000007842795,0.00006400844,0.00022883365,0.0017627666],"category_scores_gemma":[0.000264654,0.00010055507,0.00007102619,0.00026381333,0.00032314938,0.00010055472,0.0001985981,0.00025175262,0.0000017417582],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007248432,0.0011643528,0.43261167,0.00048727597,0.00020829956,0.5455676,0.00006215452,0.0000022140282,0.002481944,0.00016297463,0.000078981764,0.01644773],"study_design_scores_gemma":[0.0017380252,0.0020700553,0.80756676,0.000421216,0.0003821104,0.17170204,0.00032315915,0.000032706746,0.01341704,0.00013044114,0.0020666206,0.00014982616],"about_ca_topic_score_codex":0.0007486402,"about_ca_topic_score_gemma":0.0013401413,"teacher_disagreement_score":0.3749551,"about_ca_system_score_codex":0.00006429894,"about_ca_system_score_gemma":0.0004893672,"threshold_uncertainty_score":0.99914974},"labels":[],"label_agreement":null},{"id":"W3196317433","doi":"10.1016/j.amsu.2021.102848","title":"Fungal burn wound infection caused by Fusarium dimerum: A case series on a rare etiology","year":2021,"lang":"en","type":"article","venue":"Annals of Medicine and Surgery","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Stephen's University","funders":"","keywords":"Medicine; Etiology; Fusarium; Surgery; Sepsis; Debridement (dental); Dermatology; Internal medicine","score_opus":0.08197803815480613,"score_gpt":0.34193791324350564,"score_spread":0.2599598750886995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196317433","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9652388,0.004371559,0.00001987514,0.028988814,0.00023177134,0.000119230215,0.000023307432,0.000028822838,0.0009778286],"genre_scores_gemma":[0.98681486,0.005464049,0.000005985796,0.005650978,0.00023769512,0.000007844556,0.00012499742,0.000013803006,0.0016797747],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985264,0.00014751033,0.00045667257,0.00033512985,0.0002549057,0.00027939427],"domain_scores_gemma":[0.9984255,0.00057525927,0.00012258902,0.0003005029,0.0003820384,0.00019412147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007465647,0.00017974646,0.0007358808,0.00013479718,0.00010097902,0.0000065495256,0.000018662082,0.00017205517,0.00028368164],"category_scores_gemma":[0.0012202288,0.00013714189,0.0001364552,0.00027278689,0.00039226597,0.00009368635,0.00002167291,0.00025434492,0.000005060039],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014053407,0.00036523328,0.71831274,0.00070930325,0.00025481608,0.009819614,0.00062454806,3.2460628e-7,0.015166071,0.0003122721,0.24593794,0.007091817],"study_design_scores_gemma":[0.00488765,0.004813507,0.6611243,0.0023720388,0.0006586604,0.018342532,0.005886122,0.000028254039,0.0776473,0.0014384056,0.22185567,0.0009455941],"about_ca_topic_score_codex":0.0002531079,"about_ca_topic_score_gemma":0.0002449556,"teacher_disagreement_score":0.062481232,"about_ca_system_score_codex":0.0000107151645,"about_ca_system_score_gemma":0.00016322605,"threshold_uncertainty_score":0.55924845},"labels":[],"label_agreement":null},{"id":"W3196331804","doi":"10.1101/2021.09.02.458602","title":"Transcriptional control of hypoxic hyphal growth in the fungal pathogen <i>Candida albicans</i>","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université Laval; Montreal Heart Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fonds de Recherche du Québec - Santé; European Bioinformatics Institute","keywords":"Candida albicans; Biology; Filamentation; Corpus albicans; DNA microarray; Gene; Transcription factor; Genetics; Cell biology; Microarray analysis techniques; Genetic screen; Mutant; Fungal protein; Gene expression profiling; Virulence; Transcriptional regulation; Phenotype; Regulation of gene expression; Gene expression","score_opus":0.012848725320160128,"score_gpt":0.22124600277228307,"score_spread":0.20839727745212294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196331804","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990388,0.004926791,0.0015867841,0.00077162765,0.0004286237,0.001097906,0.0006735847,0.00007005943,0.000056653753],"genre_scores_gemma":[0.9972885,0.00040017942,0.0006981343,0.0010116957,0.0003566417,0.00016870933,0.0000023004927,0.00006748016,0.000006333441],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9963404,0.00040452057,0.0008733427,0.0009247627,0.0009055875,0.0005514057],"domain_scores_gemma":[0.9974375,0.00020051656,0.00030775258,0.0011513592,0.00069224124,0.00021066026],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013452499,0.0005025097,0.001063924,0.00019338373,0.00009119403,0.00007652094,0.00048932974,0.00051850715,0.00014876582],"category_scores_gemma":[0.00041645856,0.00041463808,0.0004661935,0.00057697494,0.00029487355,0.0001112368,0.00008701568,0.0011910107,0.000008781673],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039267977,0.00059955125,0.22794878,0.0008935961,0.00019416727,0.00042388286,0.000054215387,0.0000072432285,0.7682529,0.0011508942,0.000080021666,0.0000020622608],"study_design_scores_gemma":[0.0022761184,0.00013423957,0.9567506,0.0006913932,0.00038612253,2.1118619e-7,0.00005047019,0.000088638146,0.038580704,0.000005120768,0.00060992397,0.0004264993],"about_ca_topic_score_codex":0.00014268942,"about_ca_topic_score_gemma":0.00003697372,"teacher_disagreement_score":0.7296722,"about_ca_system_score_codex":0.00022250696,"about_ca_system_score_gemma":0.0015820804,"threshold_uncertainty_score":0.99983054},"labels":[],"label_agreement":null},{"id":"W3198528154","doi":"10.1016/j.tcsw.2021.100061","title":"Glucan and glycogen exist as a covalently linked macromolecular complex in the cell wall of Candida albicans and other Candida species","year":2021,"lang":"en","type":"article","venue":"The Cell Surface","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Glucan; Glycogen; Candida albicans; Biochemistry; Polysaccharide; Cell wall; Mannan; Corpus albicans; Glycogen branching enzyme; Biology; Chemistry; Glycogen synthase; Microbiology","score_opus":0.02674280527462349,"score_gpt":0.26878557541926557,"score_spread":0.24204277014464207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198528154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9701373,0.0038150987,0.000009452418,0.0015129916,0.000023474155,0.0003586824,0.000055690663,0.000008419358,0.024078919],"genre_scores_gemma":[0.99028426,0.0005433471,0.0001497614,0.001275077,0.000020361265,0.0000028692123,0.000016697915,0.000018260844,0.0076893633],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987539,0.00016815632,0.00025055453,0.0002849806,0.00028594563,0.0002564285],"domain_scores_gemma":[0.9990706,0.00020971544,0.00007967017,0.0004891873,0.000067214074,0.00008360545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043080616,0.00016576468,0.00033819882,0.000017720038,0.0000998646,0.000029414297,0.00014133462,0.00006428141,0.00043617102],"category_scores_gemma":[0.00004226568,0.00010201374,0.00006612696,0.00019300854,0.0003771281,0.000019725878,0.00006802759,0.00021176945,0.00000858452],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057358365,0.0003081977,0.22873391,0.00047817567,0.00006188176,0.00029414892,0.009811484,0.000019278397,0.7579877,0.0003760251,0.0012518383,0.00010380748],"study_design_scores_gemma":[0.0064270645,0.00069090334,0.579973,0.00030358456,0.00047477407,0.0001728945,0.025545288,0.00035637929,0.28578255,0.0009217429,0.098707765,0.00064405747],"about_ca_topic_score_codex":0.0053190105,"about_ca_topic_score_gemma":0.005837927,"teacher_disagreement_score":0.4722051,"about_ca_system_score_codex":0.000041029434,"about_ca_system_score_gemma":0.00015710627,"threshold_uncertainty_score":0.80407876},"labels":[],"label_agreement":null},{"id":"W3198744358","doi":"10.1101/2021.08.27.456493","title":"Host lung environment limits <i>Aspergillus fumigatus</i> germination through a SskA-dependent signaling response","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; Audrey and Theodor Geisel School of Medicine at Dartmouth; National Institutes of Health; Agricultural Research Service; U.S. Department of Agriculture; Dartmouth College; Canadian Institute for Advanced Research","keywords":"Aspergillus fumigatus; Germination; Biology; Microbiology; Virulence; Mutant; In vivo; Strain (injury); Spore germination; Inflammation; Immunology; Genetics; Botany; Gene; Anatomy","score_opus":0.016428900318560424,"score_gpt":0.2436194496545045,"score_spread":0.22719054933594407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198744358","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870023,0.006166765,0.0031467294,0.0008546665,0.0008398248,0.0014251221,0.00019515722,0.00034168217,0.00002773832],"genre_scores_gemma":[0.99217534,0.0013935929,0.0046891216,0.000717458,0.0005096155,0.00021087714,0.00000347348,0.00020036497,0.00010017044],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99430025,0.00053257414,0.0010380828,0.0019526288,0.0012930771,0.0008833679],"domain_scores_gemma":[0.9958636,0.00025095494,0.00054535456,0.002288056,0.0005867437,0.00046528986],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016550043,0.0008777247,0.0011867897,0.00021529938,0.00030132468,0.00025067423,0.00041588984,0.0009858181,0.0003540119],"category_scores_gemma":[0.00072368915,0.0009337747,0.0004778481,0.00041518247,0.00023659114,0.00029204055,0.0005239138,0.0015805466,0.00010314343],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012806371,0.0005506667,0.016143508,0.0010530915,0.00031863502,0.0010489337,0.000093584706,0.000061580504,0.97919935,0.00008624977,0.00016106473,0.0000026719306],"study_design_scores_gemma":[0.0012846073,0.00017240545,0.28943804,0.0017271087,0.00058902113,2.133267e-7,0.000063134175,0.00027557317,0.7031835,0.0000012646086,0.0022566584,0.0010085015],"about_ca_topic_score_codex":0.00003630205,"about_ca_topic_score_gemma":0.000004651917,"teacher_disagreement_score":0.2760159,"about_ca_system_score_codex":0.0015678707,"about_ca_system_score_gemma":0.0015184358,"threshold_uncertainty_score":0.99931127},"labels":[],"label_agreement":null},{"id":"W3199418828","doi":"","title":"Azole resistance in Candida, Aspergillus and Penicillium species Results of a three year Canadian national surveillance study","year":2001,"lang":"en","type":"article","venue":"Abstracts of the Interscience Conference on Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Aspergillus; Penicillium; Azole; Microbiology; Fungi imperfecti; Biology; Antifungal; Food science","score_opus":0.03472529716879872,"score_gpt":0.2773924916253173,"score_spread":0.2426671944565186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199418828","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98661953,0.000015073327,0.0000019740655,0.0038835325,0.000066398374,0.00030934162,0.000052862964,0.0000034299705,0.009047829],"genre_scores_gemma":[0.99825585,0.00024029435,0.000039085375,0.00057025097,0.000013464836,0.0000011587397,0.000002056852,0.0000054939046,0.00087235245],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988263,0.000025536541,0.0003504946,0.00029399723,0.00029740806,0.00020626432],"domain_scores_gemma":[0.9993164,0.000041022173,0.00015717249,0.0002215519,0.00017614865,0.000087726534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004480008,0.0001238256,0.00026045577,0.000098394776,0.00007312468,0.00002595457,0.00020398753,0.000048668164,0.0000510141],"category_scores_gemma":[0.00012684906,0.00008751798,0.000042199095,0.00020180234,0.0004516829,0.000072584255,0.000029732106,0.00013332063,0.0000010612816],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017312468,0.00040222166,0.9729165,0.000044090313,0.000029118844,0.000016625347,0.0017126927,0.000007092075,0.020983305,0.00033206498,0.0011153008,0.0007097433],"study_design_scores_gemma":[0.0015062614,0.00015180961,0.99458456,0.00021512818,0.0000039530814,0.0000035664484,0.00056482246,0.00003657321,0.002286416,0.00009138061,0.0004699406,0.00008560485],"about_ca_topic_score_codex":0.013948109,"about_ca_topic_score_gemma":0.3563174,"teacher_disagreement_score":0.3423693,"about_ca_system_score_codex":0.000071892,"about_ca_system_score_gemma":0.00028530863,"threshold_uncertainty_score":0.9926181},"labels":[],"label_agreement":null},{"id":"W3199851945","doi":"10.1093/genetics/iyab155","title":"The zinc cluster transcription factor Rha1 is a positive filamentation regulator in <i>Candida albicans</i>","year":2021,"lang":"en","type":"article","venue":"Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada; National Natural Science Foundation of China; Deutsche Forschungsgemeinschaft","keywords":"Filamentation; Candida albicans; Biology; Mutant; Cell biology; Repressor; Corpus albicans; Transcription factor; Gene; Virulence; Zinc finger; Regulator; Microbiology; Genetics","score_opus":0.014466275818348568,"score_gpt":0.27957795688607323,"score_spread":0.26511168106772465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199851945","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931147,0.0010557047,0.0005511979,0.0039960626,0.0001139976,0.00027520544,0.000048597278,0.000010870433,0.0008336584],"genre_scores_gemma":[0.99428266,0.00039006842,0.00047597688,0.0017743373,0.000066451925,0.000009601093,0.00004223847,0.0000116003,0.0029470427],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99906045,0.00006964991,0.00022462539,0.00022005779,0.00023589894,0.00018931025],"domain_scores_gemma":[0.9994618,0.000060454135,0.000037441354,0.00026018886,0.000116894276,0.00006318181],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000097584394,0.00009438178,0.00014103929,0.000020127927,0.000082321676,0.000029266212,0.00004429712,0.00007345718,0.00017938708],"category_scores_gemma":[0.000033287495,0.000071953255,0.00007744712,0.00015079728,0.00007347451,0.000032369342,0.000013154728,0.00012165918,0.000015791396],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009699232,0.0002945523,0.3132921,0.00013403033,0.00011933529,0.00007778686,0.0071818205,0.000015050867,0.63484037,0.0002296544,0.006816731,0.036028687],"study_design_scores_gemma":[0.001223114,0.00013116279,0.8636327,0.00007139045,0.000054730757,0.000012268232,0.0015372242,0.00022202484,0.122751154,0.00025773307,0.009993793,0.00011273164],"about_ca_topic_score_codex":0.00001796003,"about_ca_topic_score_gemma":0.0010712345,"teacher_disagreement_score":0.5503406,"about_ca_system_score_codex":0.000104637984,"about_ca_system_score_gemma":0.00013769542,"threshold_uncertainty_score":0.29341686},"labels":[],"label_agreement":null},{"id":"W3199999491","doi":"10.1016/j.str.2021.08.006","title":"Rieske head domain dynamics and indazole-derivative inhibition of Candida albicans complex III","year":2021,"lang":"en","type":"article","venue":"Structure","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Chemistry; Stereochemistry; Transmembrane domain; Ubiquinol; Dimer; Protein subunit; Biophysics; Respiratory chain; Coenzyme Q – cytochrome c reductase; Crystallography; Biology; Biochemistry; Cytochrome c; Membrane; Enzyme; Mitochondrion","score_opus":0.012465445886765045,"score_gpt":0.2785147318977325,"score_spread":0.26604928601096745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199999491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961424,0.00017557334,0.00050720427,0.0006546906,0.000044370485,0.00013906455,0.00028234415,0.000014533098,0.0020398484],"genre_scores_gemma":[0.9975073,0.000024664505,0.0015304539,0.0003226192,0.000049456507,0.0000012311148,0.0003213778,0.000009424247,0.00023351233],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999238,0.000034364486,0.00019360072,0.0002138639,0.0001816536,0.0001385104],"domain_scores_gemma":[0.9994585,0.00004122494,0.00006826859,0.00020442209,0.00015088679,0.00007673422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005663719,0.00011044001,0.00029421077,0.000030654945,0.00007535999,0.000009315038,0.000023130891,0.000108406006,0.0005295123],"category_scores_gemma":[0.00007133809,0.0000933276,0.00004505634,0.00017948193,0.00032447372,0.00004181965,0.00003614587,0.00019962592,4.1490412e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007298924,0.000079896345,0.39165756,0.0005635913,0.00014451818,0.00013700017,0.0038228254,0.0000040748005,0.57310057,0.02336931,0.00095977186,0.005431006],"study_design_scores_gemma":[0.0017725428,0.00012162635,0.96051973,0.00012552594,0.000046921956,0.00005202128,0.004122543,0.000108272565,0.022229299,0.010197214,0.00057394913,0.0001303248],"about_ca_topic_score_codex":0.00013018375,"about_ca_topic_score_gemma":0.0033669993,"teacher_disagreement_score":0.5688622,"about_ca_system_score_codex":0.00008126323,"about_ca_system_score_gemma":0.00014971526,"threshold_uncertainty_score":0.57977885},"labels":[],"label_agreement":null},{"id":"W3200001688","doi":"10.1101/2021.09.18.460925","title":"Identification of Serum Bridging Molecules that Mediate Human Endothelial Cell Invasion by <i>Candida</i> species","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Clinical and Translational Science Institute, University of California, Los Angeles; National Center for Advancing Translational Sciences; National Institutes of Health","keywords":"Biology; Endocytosis; Microbiology; Candida albicans; Endothelial stem cell; Cell biology; Candida glabrata; Vitronectin; Receptor; Integrin; In vitro; Biochemistry","score_opus":0.015444747229777678,"score_gpt":0.22947587441328807,"score_spread":0.2140311271835104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200001688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99350077,0.002407915,0.0016092544,0.00016641655,0.0005925027,0.0006933806,0.0008233306,0.00016452566,0.00004190941],"genre_scores_gemma":[0.9977333,0.0011659848,0.00037641072,0.00015452618,0.00031200802,0.000047561225,0.000005858606,0.00010880914,0.00009555504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965224,0.0001686959,0.00089756935,0.0010977393,0.0008335685,0.00047998456],"domain_scores_gemma":[0.9967482,0.000059538157,0.0007961943,0.0015259815,0.0006092078,0.00026089637],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000758945,0.00051128253,0.0009227065,0.00020409432,0.00017482761,0.00016166462,0.00037790195,0.00047265022,0.00012904262],"category_scores_gemma":[0.00022933877,0.0005361069,0.00032577847,0.00032485722,0.0002509404,0.00016187668,0.0003628352,0.00073383166,0.000019176836],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047631253,0.00025184598,0.09543674,0.0015245025,0.00008583135,0.000057303092,0.000028325985,0.000004311358,0.90204734,0.000040679006,0.00047370527,0.0000018140929],"study_design_scores_gemma":[0.00053265464,0.00003680558,0.2629587,0.0005865055,0.00018219325,1.48169335e-8,0.000027461343,0.00004378914,0.73506176,8.423397e-7,0.00024806164,0.0003212279],"about_ca_topic_score_codex":0.00007248612,"about_ca_topic_score_gemma":0.000014500668,"teacher_disagreement_score":0.16752197,"about_ca_system_score_codex":0.0002680393,"about_ca_system_score_gemma":0.000610799,"threshold_uncertainty_score":0.99970907},"labels":[],"label_agreement":null},{"id":"W3200734451","doi":"10.1503/cmaj.211026-f","title":"Mucormycose du palais chez une patiente ayant contracté le SRAS-CoV-2","year":2021,"lang":"fr","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Gynecology; Medicine","score_opus":0.007342157612741893,"score_gpt":0.2366263394846912,"score_spread":0.2292841818719493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200734451","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6399809,0.023267884,0.00046861827,0.30733716,0.010547935,0.00026813155,0.0002570059,0.000031278738,0.017841093],"genre_scores_gemma":[0.9473515,0.0059806304,0.00009836607,0.03057985,0.0066743675,0.000005237827,0.00007472027,0.000043016902,0.009192318],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99389666,0.00071489933,0.0011545756,0.00043043264,0.002354048,0.001449387],"domain_scores_gemma":[0.9927344,0.0005852183,0.00048713287,0.0002960924,0.0019861322,0.0039110645],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0036968535,0.00031210977,0.0007356462,0.00014597029,0.00066565454,0.00019953428,0.00025348578,0.0010768423,0.012301619],"category_scores_gemma":[0.01490607,0.00031782076,0.00042423964,0.0006919176,0.00022462201,0.00030814347,0.00003506402,0.0026582403,0.00090994436],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006976234,0.000602825,0.57219154,0.00010353496,0.00059272954,0.016478013,0.0014201947,0.0000016115969,0.00055145525,0.0025701427,0.33033434,0.07508386],"study_design_scores_gemma":[0.003287798,0.00013760306,0.26177704,0.0007752544,0.00014967303,0.00093929743,0.0029165177,0.00043911903,0.00051307114,0.00026367922,0.7285029,0.00029800425],"about_ca_topic_score_codex":0.029218286,"about_ca_topic_score_gemma":0.39702,"teacher_disagreement_score":0.39816862,"about_ca_system_score_codex":0.0037419014,"about_ca_system_score_gemma":0.027749298,"threshold_uncertainty_score":0.9999274},"labels":[],"label_agreement":null},{"id":"W3202541944","doi":"10.1128/mbio.02446-21","title":"Preclinical Evaluation of Recombinant Microbial Glycoside Hydrolases in the Prevention of Experimental Invasive Aspergillosis","year":2021,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McGill University; Hospital for Sick Children; Institute of Infection and Immunity; McGill University Health Centre","funders":"Canadian Glycomics Network; U.S. Army; Cystic Fibrosis Canada","keywords":"Aspergillus fumigatus; Aspergillosis; Microbiology; Biofilm; Aspergillus; Immune system; Medicine; Biology; Immunology; Bacteria","score_opus":0.09252898878172222,"score_gpt":0.3895316086553168,"score_spread":0.29700261987359455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202541944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972914,0.0009704695,0.000004994135,0.00025826303,0.00011130166,0.00035881647,0.0000038631842,0.000003039671,0.0009978735],"genre_scores_gemma":[0.9994968,0.0000705835,0.00013737656,0.00006825176,0.000021929605,0.000016511947,0.000034135024,0.0000043502328,0.00015005916],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867386,0.00033942872,0.00038419984,0.00017395649,0.00034186724,0.00008671525],"domain_scores_gemma":[0.9992684,0.00016439274,0.00010842555,0.0002548094,0.00018450242,0.000019457699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009969063,0.000062202664,0.00021762996,0.000028637678,0.000018919432,0.000003430855,0.000056062054,0.000063126274,0.00025664186],"category_scores_gemma":[0.0008647307,0.00004569315,0.00013570732,0.00014060254,0.000075939846,0.000043312466,0.00002493324,0.000087185705,0.0000039657107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005298374,0.002054286,0.1714512,0.00009333235,0.00004206403,0.000010355731,0.0009826425,0.0000043733694,0.822076,0.000086424676,0.00043302155,0.002236439],"study_design_scores_gemma":[0.0014905581,0.00037712127,0.29549596,0.00023775968,0.000102182516,0.0000072871944,0.0012279331,0.00007432458,0.70066696,0.00025389405,0.000028634007,0.00003735046],"about_ca_topic_score_codex":0.00006328236,"about_ca_topic_score_gemma":0.00042900597,"teacher_disagreement_score":0.12404477,"about_ca_system_score_codex":0.00006532144,"about_ca_system_score_gemma":0.00029567792,"threshold_uncertainty_score":0.28100485},"labels":[],"label_agreement":null},{"id":"W3202919067","doi":"10.1093/genetics/iyab131","title":"The SAGA and NuA4 component Tra1 regulates <i>Candida albicans</i> drug resistance and pathogenesis","year":2021,"lang":"en","type":"article","venue":"Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Candida albicans; Caspofungin; Transcriptome; Antifungal drug; Corpus albicans; Echinocandins; Genetics; Fungal protein; Saccharomyces cerevisiae; Microbiology; Gene; Gene expression; Amphotericin B","score_opus":0.010306560227936606,"score_gpt":0.23438933715507287,"score_spread":0.22408277692713627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202919067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9510269,0.043627065,0.00006063683,0.0041410564,0.00006778961,0.00016149746,0.000019423434,0.000019500374,0.0008761083],"genre_scores_gemma":[0.9780425,0.011453991,0.0018047844,0.000477648,0.00007152445,0.000006825586,0.000012234186,0.000017043612,0.0081134895],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989061,0.000073920506,0.00022567087,0.00032588065,0.00022524223,0.00024320802],"domain_scores_gemma":[0.9990881,0.00016906283,0.00004722759,0.00042885897,0.00011579404,0.0001509545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002231236,0.00013398123,0.00022549735,0.00001346385,0.000259112,0.000050195144,0.00005651721,0.00005590612,0.000021454123],"category_scores_gemma":[0.00007305555,0.000097468226,0.0000495164,0.000111138754,0.00030137898,0.000016611297,0.000058866994,0.000104088016,0.0000023874934],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010014897,0.00028706278,0.50904423,0.0007686029,0.00027338997,0.0004201244,0.0020553826,0.000006138751,0.40799916,0.0017076156,0.025815658,0.050621156],"study_design_scores_gemma":[0.0009020092,0.000046490382,0.8192182,0.00010470902,0.00014913433,0.000050699306,0.00088954275,0.00007402119,0.03703177,0.0009940324,0.14033332,0.00020604447],"about_ca_topic_score_codex":0.000006739871,"about_ca_topic_score_gemma":0.0010969288,"teacher_disagreement_score":0.3709674,"about_ca_system_score_codex":0.00002451159,"about_ca_system_score_gemma":0.00009835413,"threshold_uncertainty_score":0.3974639},"labels":[],"label_agreement":null},{"id":"W3204805824","doi":"10.3389/fcimb.2021.729476","title":"Molecular Epidemiology of Azole-Resistant Aspergillus fumigatus in France Shows Patient and Healthcare Links to Environmentally Occurring Genotypes","year":2021,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institut écologie et environnement; Natural Environment Research Council; Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement; Medical Research Council; Canadian Institute for Advanced Research; Centre National de la Recherche Scientifique; Sight Research UK; Wellcome Trust","keywords":"Aspergillus fumigatus; Genotype; Genotyping; Biology; Azole; Microbiology; Aspergillus; Molecular epidemiology; Antifungal; Genetics; Gene","score_opus":0.009371238554463668,"score_gpt":0.2448461129194017,"score_spread":0.23547487436493802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204805824","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9730918,0.022181338,0.00374509,0.00031705602,0.00029122597,0.00028367306,0.000027446691,0.0000073845627,0.00005502292],"genre_scores_gemma":[0.99520737,0.0010829809,0.0023550768,0.0012387644,0.000015565176,0.000010771188,0.00004721685,0.000010267518,0.00003200906],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984679,0.0002728021,0.00048736675,0.00044699205,0.000035945817,0.00028895185],"domain_scores_gemma":[0.99953645,0.00004803114,0.00008551629,0.0001937192,0.00003593332,0.000100362464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030442985,0.0001490753,0.0005620055,0.00014972598,0.00003902395,0.0000020360035,0.000028635379,0.00032276177,0.000020672906],"category_scores_gemma":[0.00014795798,0.00014686683,0.00006148995,0.00015004977,0.00018292868,0.000028933091,0.00007109544,0.0003632255,0.0000013313313],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000127558,0.00007296666,0.6527582,0.00013437816,0.000018261182,0.000041507403,0.00020432862,0.000049724542,0.343912,0.00004746348,0.00003402067,0.0025996347],"study_design_scores_gemma":[0.0015806126,0.0008833316,0.85649115,0.00025041666,0.000036227222,0.000061607025,0.0005155693,0.00016777366,0.13180107,0.0002984824,0.00764019,0.00027354422],"about_ca_topic_score_codex":0.00028255497,"about_ca_topic_score_gemma":0.00029370587,"teacher_disagreement_score":0.21211092,"about_ca_system_score_codex":0.000112969436,"about_ca_system_score_gemma":0.00005851901,"threshold_uncertainty_score":0.59890556},"labels":[],"label_agreement":null},{"id":"W3205306282","doi":"10.21203/rs.3.rs-976834/v1","title":"Genotyping and Drug Resistance Profile of Clinical Isolates of Candida Albicans From Vulvovaginal Candidiasis in The Eastern China","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Government of Jiangsu Province; National Natural Science Foundation of China","keywords":"Vulvovaginal Candidiasis; Genotyping; Candida albicans; Microbiology; Drug resistance; Fluconazole; Biology; Medicine; Genotype; Antifungal; Gene; Genetics","score_opus":0.07949422569293824,"score_gpt":0.4329416771677809,"score_spread":0.3534474514748427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3205306282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98319227,0.011858041,0.00003861724,0.0016726556,0.00007490864,0.0010904343,0.0002601785,0.000008818316,0.0018040905],"genre_scores_gemma":[0.99556184,0.0025977725,0.00062947744,0.000029648372,0.0001616151,0.000061080464,0.00017267842,0.000024542322,0.00076131953],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99539816,0.0011697424,0.001051171,0.00079166924,0.001119364,0.0004698609],"domain_scores_gemma":[0.9962962,0.0014607817,0.00027507887,0.001182058,0.0006175221,0.00016834041],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0046435315,0.00023100432,0.0011125841,0.00019609719,0.000093882525,0.000057997437,0.00040793003,0.00030072697,0.00022646888],"category_scores_gemma":[0.002102773,0.00016667864,0.00023539785,0.00044617587,0.00072454824,0.0000661149,0.0005221732,0.0022410993,0.0000022067286],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015620795,0.0003664434,0.98246235,0.003961576,0.00014295614,0.00012675676,0.0071947025,0.0000021335272,0.00060932117,0.00006249765,0.0005041537,0.0030050387],"study_design_scores_gemma":[0.0008513164,0.00013699273,0.98361164,0.0051977094,0.000063901236,0.0000016395295,0.0084457025,0.00028363866,0.0005294861,0.0004584596,0.00027740689,0.00014209337],"about_ca_topic_score_codex":0.021118112,"about_ca_topic_score_gemma":0.032184448,"teacher_disagreement_score":0.01236961,"about_ca_system_score_codex":0.0001046175,"about_ca_system_score_gemma":0.0016519167,"threshold_uncertainty_score":0.98547566},"labels":[],"label_agreement":null},{"id":"W3206211830","doi":"10.3390/jof7100860","title":"Genetic Analyses of Amphotericin B Susceptibility in Aspergillus fumigatus","year":2021,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; McMaster University","keywords":"Aspergillus fumigatus; Amphotericin B; Microbiology; Biology; Aspergillus; Aspergillosis; Fungi imperfecti; Antifungal; Immunology","score_opus":0.04372095663953922,"score_gpt":0.3494784816919233,"score_spread":0.30575752505238407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3206211830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881973,0.01004897,0.00026538744,0.00018965657,0.00014649838,0.000067822606,0.0000050665476,0.0000036667511,0.0010756195],"genre_scores_gemma":[0.99529964,0.0009910695,0.0031539712,0.0001313166,0.00011771763,3.3490684e-7,0.00000168568,0.000009602734,0.00029467413],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981481,0.0001248833,0.0009120108,0.00017567855,0.0004369591,0.00020238558],"domain_scores_gemma":[0.9984788,0.00012897092,0.00031577775,0.00034905202,0.00058143935,0.00014600434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004916451,0.00011946629,0.0006754401,0.0001553681,0.0000175718,0.000008267297,0.000094378556,0.00009034013,0.0005263508],"category_scores_gemma":[0.00054661394,0.000092720096,0.0003392008,0.0004908443,0.00008822842,0.00007670072,0.00003070465,0.0002978368,0.000005576354],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045576988,0.00033987898,0.5254893,0.00014266695,0.00007652241,0.0006967205,0.00015370679,0.000034049455,0.4669614,0.000009165149,0.00017819028,0.005462659],"study_design_scores_gemma":[0.0010379635,0.00039097117,0.91522026,0.0002285723,0.00013498717,0.00021127124,0.0005786014,0.000061719125,0.08172014,0.0001531571,0.00018953059,0.00007282017],"about_ca_topic_score_codex":0.00007204889,"about_ca_topic_score_gemma":0.00026692924,"teacher_disagreement_score":0.38973102,"about_ca_system_score_codex":0.00013791189,"about_ca_system_score_gemma":0.0004917761,"threshold_uncertainty_score":0.5763172},"labels":[],"label_agreement":null},{"id":"W3206548143","doi":"10.3389/fmed.2021.687028","title":"Risk Factors of Invasive Fungal Infection in Recipients After Liver Transplantation: A Systematic Review and Meta-Analysis","year":2021,"lang":"en","type":"review","venue":"Frontiers in Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Meta-analysis; Liver transplantation; Odds ratio; Cochrane Library; Internal medicine; Publication bias; Transplantation; Dialysis","score_opus":0.0566904079684766,"score_gpt":0.3378994679972267,"score_spread":0.2812090600287501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3206548143","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00073007453,0.9959116,0.0004198658,0.00003101515,0.00013645017,0.0025929736,0.000110898065,0.000008091701,0.000059022397],"genre_scores_gemma":[0.0016891361,0.9970092,0.00025184112,0.00011027944,0.000022561608,0.00030053715,0.00029090178,0.00002402834,0.00030147305],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99550474,0.0011780894,0.0019382198,0.00061691087,0.00053605565,0.00022598277],"domain_scores_gemma":[0.99787307,0.00040942815,0.00082452304,0.0006023105,0.00016513534,0.00012553277],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001628857,0.0004702661,0.0134759545,0.0009768177,0.00002195926,0.0000050025096,0.00009723169,0.00030304547,0.000371946],"category_scores_gemma":[0.0014867858,0.0002840862,0.0014127541,0.002025048,0.00018790095,0.00008253133,0.000022847811,0.0006157357,0.0000016008328],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028423776,0.0000785055,0.058353044,0.902481,0.03753054,0.00030638525,0.00045172893,2.2104177e-7,1.859896e-8,0.0000010622971,0.00024927914,0.00051979074],"study_design_scores_gemma":[0.00031678964,0.000103916274,0.011072438,0.19003147,0.797648,0.000025741696,0.00010729914,0.0000018236373,3.253975e-7,0.0000042404295,0.0005100403,0.00017791972],"about_ca_topic_score_codex":0.00044757605,"about_ca_topic_score_gemma":0.00095608184,"teacher_disagreement_score":0.7601175,"about_ca_system_score_codex":0.00022233807,"about_ca_system_score_gemma":0.00017156995,"threshold_uncertainty_score":0.99996114},"labels":[],"label_agreement":null},{"id":"W3207021542","doi":"10.1186/s13223-021-00624-4","title":"Pulmonary eosinophilia may indicate onset stage of allergic bronchopulmonary aspergillosis","year":2021,"lang":"en","type":"article","venue":"Allergy Asthma and Clinical Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Allergic bronchopulmonary aspergillosis; Medicine; Eosinophilia; Bronchiectasis; Gastroenterology; Eosinophil; Internal medicine; Interquartile range; Asthma; Immunoglobulin E; Bronchoscopy; Pathology; Immunology; Lung; Antibody","score_opus":0.02660186475736084,"score_gpt":0.32254590458963656,"score_spread":0.29594403983227574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3207021542","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98061436,0.009648931,0.00002736739,0.0026104946,0.00030469414,0.00015366475,0.00003863107,0.000044895147,0.006556977],"genre_scores_gemma":[0.9662956,0.017751029,0.00039492638,0.0007956713,0.000081794446,0.000008908449,0.0001310315,0.000027923466,0.014513126],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99712855,0.0003786305,0.001086474,0.0007313265,0.00024462538,0.00043037513],"domain_scores_gemma":[0.9981206,0.00047606268,0.000254574,0.00072696316,0.0002110475,0.00021073566],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004741678,0.00026137976,0.00093005254,0.00008245749,0.00011291631,0.000009475731,0.00017537501,0.00054309313,0.0018703085],"category_scores_gemma":[0.00045211572,0.00023246372,0.00038554467,0.00024373182,0.0010418337,0.000087700064,0.00027947425,0.00067881885,0.00007139901],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006531625,0.0047181454,0.86423403,0.00026587368,0.0036916076,0.004156537,0.00014747566,0.0000034472007,0.034635667,0.0037006726,0.0011561038,0.07675884],"study_design_scores_gemma":[0.0013700093,0.0009310497,0.9549925,0.00009711234,0.000057639994,0.00036930933,0.00043862316,0.000054103206,0.0013636069,0.0003277886,0.039783753,0.00021451166],"about_ca_topic_score_codex":0.00008839105,"about_ca_topic_score_gemma":0.0000917309,"teacher_disagreement_score":0.09075848,"about_ca_system_score_codex":0.000031203388,"about_ca_system_score_gemma":0.00029260176,"threshold_uncertainty_score":0.9990421},"labels":[],"label_agreement":null},{"id":"W3207147822","doi":"10.2139/ssrn.3868099","title":"Pulmonary Aspergillosis in Critically Ill Coronavirus Disease 2019 Patients– A Multinational Observational Study by the European Confederation of Medical Mycology","year":2021,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Pulmonary aspergillosis; Aspergillosis; Observational study; Multinational corporation; Critically ill; Medicine; Intensive care medicine; Coronavirus disease 2019 (COVID-19); Mycology; Medical mycology; Disease; Infectious disease (medical specialty); Immunology; Political science; Pathology; Microbiology; Biology; Law","score_opus":0.03240362894769066,"score_gpt":0.3325986980609253,"score_spread":0.3001950691132346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3207147822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883192,0.0012522041,0.0006050626,0.008550961,0.00009031737,0.00029306894,0.000026134705,0.0000075018484,0.0008555096],"genre_scores_gemma":[0.9972866,0.0005865331,0.000024581412,0.0011738782,0.00011276936,0.000007750228,0.00016434536,0.000014966281,0.0006285598],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9966891,0.0007284204,0.000573957,0.00025050133,0.0010883664,0.0006696558],"domain_scores_gemma":[0.9980498,0.00026302758,0.00011483686,0.00017035646,0.0012493377,0.00015265036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026675335,0.0001246147,0.00023516217,0.000047307025,0.00016004876,0.000021133157,0.00017069218,0.00006229155,0.00030259628],"category_scores_gemma":[0.0030390315,0.00009241297,0.000107376116,0.0001244872,0.00013024668,0.00011139329,0.0000614934,0.0011507572,0.000009863078],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047441237,0.0034112432,0.96606773,0.000014817891,0.00010272398,0.00012684989,0.000090136295,0.000004742881,0.0008199122,0.01747745,0.00016976731,0.011240237],"study_design_scores_gemma":[0.0021850655,0.000389845,0.99177057,0.000040318384,0.00006574919,0.00009446119,0.0016000702,0.00033325888,0.000025890302,0.003098371,0.00030881356,0.0000875846],"about_ca_topic_score_codex":0.000061153565,"about_ca_topic_score_gemma":0.00078664,"teacher_disagreement_score":0.025702866,"about_ca_system_score_codex":0.00044516154,"about_ca_system_score_gemma":0.0036686272,"threshold_uncertainty_score":0.65079874},"labels":[],"label_agreement":null},{"id":"W3207398679","doi":"10.1128/mra.00725-21","title":"Draft Genome Sequence of Rhodotorula mucilaginosa from an Adult Patient in Qatar","year":2021,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Genome; Whole genome sequencing; Opportunistic pathogen; Biology; Fungal pathogen; Rhodotorula; Genetics; Sequence (biology); Microbiology; Pathogen; Computational biology; Gene; Virulence; Yeast","score_opus":0.020496425044040836,"score_gpt":0.28550541383236905,"score_spread":0.26500898878832824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3207398679","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950627,0.00080458034,0.00003067645,0.0003034119,0.00008999499,0.0002802799,0.0027475713,0.000021987715,0.0006587587],"genre_scores_gemma":[0.9856634,0.00007887074,0.0006323556,0.0021726415,0.000045834073,0.000012054144,0.010849773,0.000015900123,0.00052917196],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980634,0.00021779726,0.0005612701,0.0006273776,0.00013300448,0.00039714284],"domain_scores_gemma":[0.9987266,0.000047888094,0.0001437251,0.0006826595,0.0002911383,0.00010798276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018977482,0.00020133342,0.000506378,0.000080929894,0.000053935495,0.000008821606,0.00016527185,0.00019121039,0.00034707246],"category_scores_gemma":[0.00013122577,0.00018716477,0.00009729874,0.0002416749,0.0002492391,0.00007025215,0.00012164587,0.00025162986,0.000045378692],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027949407,0.0003526501,0.29166105,0.000037605907,0.00004716477,0.00016785049,0.0010498405,0.000004915103,0.70573723,0.0000089794985,0.00022356253,0.00042964338],"study_design_scores_gemma":[0.00822034,0.0024849463,0.25712264,0.0010226974,0.00024058609,0.00018920512,0.011371024,0.00009089441,0.14736965,0.000205793,0.57055235,0.001129847],"about_ca_topic_score_codex":0.00033733962,"about_ca_topic_score_gemma":0.0004312815,"teacher_disagreement_score":0.57032883,"about_ca_system_score_codex":0.00015231865,"about_ca_system_score_gemma":0.00020413133,"threshold_uncertainty_score":0.7632358},"labels":[],"label_agreement":null},{"id":"W3207424466","doi":"10.1038/s41467-021-26390-w","title":"A small molecule produced by Lactobacillus species blocks Candida albicans filamentation by inhibiting a DYRK1-family kinase","year":2021,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Canadian Institute of Mining, Metallurgy and Petroleum; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Mitacs; Genome Canada; National Institutes of Health; U.S. Department of Health and Human Services; Government of Canada; National Institute of General Medical Sciences; Canadian Institute for Advanced Research; Burroughs Wellcome Fund","keywords":"Candida albicans; Filamentation; Corpus albicans; Biology; Microbiology; Biofilm; Lactobacillus; Context (archaeology); Yeast; Virulence; Human microbiome; Bacteria; Microbiome; Genetics; Gene","score_opus":0.029868580846198627,"score_gpt":0.29485591710468684,"score_spread":0.2649873362584882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3207424466","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9485945,0.017642327,0.00014100672,0.011958293,0.00007353232,0.0004984101,0.00033456425,0.00010794764,0.020649431],"genre_scores_gemma":[0.98690635,0.00080409786,0.0017348287,0.0026255557,0.00004509456,0.000055346736,0.0017569045,0.000024078314,0.0060477387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99857605,0.00016856397,0.0003308335,0.000376746,0.00028456352,0.00026322302],"domain_scores_gemma":[0.99759084,0.00021558754,0.00011834609,0.001484192,0.00045284568,0.00013821342],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022127983,0.00017976452,0.00027123318,0.000048692804,0.0003345594,0.000055967917,0.00030952788,0.00023718183,0.0001246074],"category_scores_gemma":[0.0008651895,0.00017660341,0.00011262412,0.0004888453,0.00017029913,0.00007644613,0.00018620375,0.0010218103,0.000012938466],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005145241,0.0004944802,0.020112608,0.0000419769,0.00006161996,0.000012889956,0.0004404093,2.9546223e-7,0.92029333,0.00043509537,0.057359837,0.00069599185],"study_design_scores_gemma":[0.0026696832,0.00019891739,0.072883196,0.00042132929,0.00035683456,0.000031834887,0.0056546847,0.00018876167,0.65746015,0.0000657294,0.2593985,0.0006704006],"about_ca_topic_score_codex":0.00014479423,"about_ca_topic_score_gemma":0.0016772078,"teacher_disagreement_score":0.2628332,"about_ca_system_score_codex":0.00024423303,"about_ca_system_score_gemma":0.000367655,"threshold_uncertainty_score":0.7201678},"labels":[],"label_agreement":null},{"id":"W3207434042","doi":"10.1016/j.healun.2021.09.014","title":"Risk factors of invasive fungal infections in lung transplant recipients: A systematic review and meta-analysis","year":2021,"lang":"en","type":"review","venue":"The Journal of Heart and Lung Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trillium Health Centre; University Health Network","funders":"","keywords":"Meta-analysis; Medicine; Intensive care medicine; Systematic review; Invasive candidiasis; Lung; Lung transplantation; Internal medicine; MEDLINE; Biology; Antifungal; Dermatology; Fluconazole","score_opus":0.05139607276488542,"score_gpt":0.35230135683941216,"score_spread":0.30090528407452677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3207434042","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00840946,0.9899764,0.00021444587,0.00007082004,0.000027161435,0.0011019415,0.00018918313,0.000002861405,0.000007701108],"genre_scores_gemma":[0.053447988,0.9463631,0.000033147295,0.000033281834,0.000010361598,0.000013127875,0.000057707573,0.000011764596,0.00002954645],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99651253,0.0012951294,0.0015605353,0.00016564099,0.00033476434,0.00013137856],"domain_scores_gemma":[0.99730253,0.0013024417,0.00089890417,0.00022198539,0.00018642354,0.0000877388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002069841,0.00026409884,0.0052451114,0.00038200498,0.00007633484,0.0000133519225,0.00007016334,0.00012944987,0.000052564876],"category_scores_gemma":[0.0001642678,0.0001333022,0.0014427933,0.0006890161,0.00007015083,0.00011491344,0.000005007357,0.0005487281,2.7059784e-7],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005968489,0.00010695623,0.0110507235,0.9254613,0.061854392,0.000037340236,0.0013335018,0.0000041611274,0.0000040803616,0.000006744545,0.000023577397,0.00005755368],"study_design_scores_gemma":[0.00022358823,0.000119215154,0.0037692485,0.09311512,0.9017699,0.0007235489,0.00010786613,0.0000043074733,0.0000038238195,0.0000025044565,0.000054762833,0.00010612206],"about_ca_topic_score_codex":0.00009009157,"about_ca_topic_score_gemma":0.00034985747,"teacher_disagreement_score":0.8399155,"about_ca_system_score_codex":0.00005020857,"about_ca_system_score_gemma":0.0001924028,"threshold_uncertainty_score":0.54359055},"labels":[],"label_agreement":null},{"id":"W3207751896","doi":"10.26420/jbacteriolmycol.2021.1182","title":"Candida albicans Secreted Aspartic Protease 7 is Essential for Damage of Human Oral Epithelial Cells","year":2021,"lang":"en","type":"article","venue":"Journal of Bacteriology and Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; George & Fay Yee Centre for Healthcare Innovation","funders":"University of Hong Kong","keywords":"Corpus albicans; Candida albicans; Microbiology; Endocytosis; Biology; Internalization; Virulence; Proteases; Mutant; Strain (injury); Gene; Enzyme; Biochemistry; Cell","score_opus":0.017164132624124858,"score_gpt":0.3075233690492101,"score_spread":0.29035923642508527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3207751896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99808997,0.000120120334,0.00027956485,0.0009294512,0.0002486617,0.00021641966,0.000052370542,0.0000032814175,0.000060152302],"genre_scores_gemma":[0.9981391,0.000097938515,0.0005918298,0.00052029325,0.00018921487,0.0000052307932,0.000014727769,0.000008455109,0.0004332378],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99883413,0.00017842997,0.0005205438,0.0001669474,0.000072283685,0.00022767983],"domain_scores_gemma":[0.9988153,0.00015579788,0.0003681637,0.00014180689,0.00038247267,0.00013646952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033900156,0.00010695032,0.000677219,0.00007550357,0.000072101146,0.0000048980964,0.000058488033,0.00016633514,0.0005686183],"category_scores_gemma":[0.00022419398,0.00008500981,0.00016314181,0.000068688874,0.000402716,0.00004796771,0.00003134803,0.00023747802,0.0000012842814],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024080593,0.00016941338,0.054890886,0.00015409435,0.00018438367,0.00019936282,0.000287873,2.921216e-7,0.94059634,0.00015880643,0.000518785,0.00043172427],"study_design_scores_gemma":[0.004086847,0.00495904,0.6375988,0.00006404887,0.00046725033,0.00041996007,0.00035232308,0.00002145863,0.34781915,0.0006895033,0.0034056467,0.000115925155],"about_ca_topic_score_codex":0.000023620705,"about_ca_topic_score_gemma":0.00019180059,"teacher_disagreement_score":0.59277713,"about_ca_system_score_codex":0.000024871262,"about_ca_system_score_gemma":0.00039012692,"threshold_uncertainty_score":0.62259716},"labels":[],"label_agreement":null},{"id":"W3208697091","doi":"10.1016/j.compbiomed.2021.104956","title":"GRP78: A possible relationship of COVID-19 and the mucormycosis; in silico perspective","year":2021,"lang":"en","type":"article","venue":"Computers in Biology and Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Mucormycosis; Virulence; Zygomycosis; In silico; Biology; Microbiology; Virulence factor; Fungal protein; Medicine; Pathology; Peptide sequence; Antifungal; Genetics; Amphotericin B","score_opus":0.036591432058062826,"score_gpt":0.37641322419019096,"score_spread":0.33982179213212815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3208697091","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9614387,0.011924272,0.0010087829,0.024023347,0.000099459314,0.00021243688,0.000001933801,0.000007498838,0.0012835292],"genre_scores_gemma":[0.9959375,0.001146388,0.00038570006,0.0023883728,0.00004579998,0.0000054948346,0.000009465362,0.0000026195107,0.000078614205],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999132,0.00021187955,0.00025027146,0.00023486123,0.000053015276,0.0001179839],"domain_scores_gemma":[0.9983598,0.0012839449,0.00005005206,0.0001633402,0.00006249444,0.00008039814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075300713,0.000077382385,0.0003720984,0.000102084436,0.00004747525,0.0000014313475,0.000039343508,0.00009640801,0.000019078423],"category_scores_gemma":[0.0021727718,0.00004660317,0.000023514389,0.00026268343,0.0011676595,0.000018927432,0.000047313035,0.00022461548,3.3149996e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005661713,0.000048448073,0.9163208,0.00009486716,0.000016820135,0.000038875583,0.0041640345,0.0000010587189,0.00042262272,0.077411175,0.00016213865,0.0007529551],"study_design_scores_gemma":[0.006081043,0.00021453087,0.94653505,0.00018815932,0.000029484963,0.0000716282,0.0053744577,0.00026016455,0.000040629544,0.0409541,0.00020322346,0.000047520058],"about_ca_topic_score_codex":0.000403447,"about_ca_topic_score_gemma":0.00064221607,"teacher_disagreement_score":0.036457077,"about_ca_system_score_codex":0.00005926676,"about_ca_system_score_gemma":0.00016366126,"threshold_uncertainty_score":0.430229},"labels":[],"label_agreement":null},{"id":"W3208856720","doi":"10.3389/fcimb.2021.751676","title":"Is Natural Population of Candida tropicalis Sexual, Parasexual, and/or Asexual?","year":2021,"lang":"en","type":"review","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Chinese Academy of Agricultural Sciences; McMaster University","keywords":"Biology; Asexual reproduction; Candida tropicalis; Sexual reproduction; Asexuality; Genetic diversity; Population; Ecology; Reproduction; Evolutionary biology; Zoology; Genetics; Yeast; Demography; Human sexuality","score_opus":0.031953317752827094,"score_gpt":0.3281810038852991,"score_spread":0.29622768613247197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3208856720","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.078866675,0.91946673,0.00028088508,0.000019251367,0.00077777996,0.00046565715,0.00009185716,0.000014234984,0.00001694447],"genre_scores_gemma":[0.009026073,0.9879939,0.00043352615,0.00008575274,0.000102320984,0.000016061309,0.0014545012,0.000023676424,0.0008642173],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982325,0.00022038961,0.00068383856,0.00056595844,0.000055988254,0.00024131734],"domain_scores_gemma":[0.9992674,0.000074022864,0.00024979172,0.00027129872,0.000063163985,0.00007430985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020806928,0.00030885203,0.0018931988,0.00021070038,0.000060795224,0.0000129742875,0.00004120332,0.00058759254,0.000084026775],"category_scores_gemma":[0.00012462355,0.00022970827,0.00015985222,0.00029030626,0.00022316807,0.00005393716,0.00005279032,0.0004854917,0.0000015551302],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022980504,0.0003035362,0.25125363,0.023307832,0.00051935436,0.00007779417,0.00017474851,1.2705466e-7,0.0012250844,0.000025498604,0.0114619285,0.71142066],"study_design_scores_gemma":[0.0011020111,0.00058910204,0.004058976,0.0028144815,0.00089231646,0.00029119666,0.000142838,0.000015624792,0.00013546462,0.00001461899,0.98952967,0.00041371278],"about_ca_topic_score_codex":0.0006124175,"about_ca_topic_score_gemma":0.00024066147,"teacher_disagreement_score":0.97806776,"about_ca_system_score_codex":0.00013007828,"about_ca_system_score_gemma":0.00013577852,"threshold_uncertainty_score":0.9367232},"labels":[],"label_agreement":null},{"id":"W3210241331","doi":"10.1007/978-1-0716-1720-5_4","title":"Design and Generation of a CRISPR Interference System for Genetic Repression and Essential Gene Analysis in the Fungal Pathogen Candida albicans","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Candida albicans; CRISPR; Biology; CRISPR interference; Gene; Cas9; Psychological repression; Computational biology; Genetics; Plasmid; Genome editing; RNA interference; RNA; Gene expression","score_opus":0.0447028395463388,"score_gpt":0.40017309287512076,"score_spread":0.35547025332878196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3210241331","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.451952,0.0016720985,0.5461051,0.000047437137,0.000018769835,0.0001921537,0.000005041272,0.0000017015893,0.0000057217726],"genre_scores_gemma":[0.5973541,0.0000865167,0.40244734,0.000046490863,0.000011146916,0.00003052573,0.00001604729,0.000003238684,0.0000045592355],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99729824,0.0018537507,0.00030882092,0.00035419367,0.000054408814,0.00013056707],"domain_scores_gemma":[0.9992575,0.00028136082,0.00007144507,0.0002753301,0.00008637793,0.00002798797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014884409,0.000087729255,0.00036831776,0.00011032838,0.000026620113,0.0000074472046,0.000052697626,0.00011363324,0.000004541029],"category_scores_gemma":[0.0004801725,0.00006203169,0.0000605114,0.0002951376,0.0000902018,0.000008921148,0.00003848371,0.000088582165,2.7553332e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014466028,0.000030018524,0.06786202,0.00008275434,0.00006935334,0.000054106524,0.00031995933,0.00009135863,0.92573375,0.00012303964,0.0000011591092,0.005487807],"study_design_scores_gemma":[0.0008893322,0.000291705,0.083391,0.000060713097,0.00054147973,0.000059389367,0.00078979257,0.032935675,0.8805245,0.00039784145,0.000009261549,0.00010929763],"about_ca_topic_score_codex":0.00008306,"about_ca_topic_score_gemma":0.00017089951,"teacher_disagreement_score":0.14540212,"about_ca_system_score_codex":0.000023338718,"about_ca_system_score_gemma":0.00006791179,"threshold_uncertainty_score":0.2529579},"labels":[],"label_agreement":null},{"id":"W3212362417","doi":"10.1016/j.csbj.2021.11.001","title":"Corrigendum to “Loss of Arp1, a putative actin-related protein, triggers filamentous and invasive growth and impairs pathogenicity in <i>Candida albicans</i> ” (Computational and Structural Biotechnology Journal, 2020, 18: 4002–4015)","year":2021,"lang":"en","type":"erratum","venue":"Computational and Structural Biotechnology Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Candida albicans; Pathogenicity; Actin; Microbiology; Biology; Chemistry; Cell biology","score_opus":0.011861134625282503,"score_gpt":0.26203696863726694,"score_spread":0.25017583401198445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3212362417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97931373,0.008041982,0.00058964046,0.009345217,0.0013818159,0.000873353,0.00036731118,0.00004956016,0.000037397498],"genre_scores_gemma":[0.9888774,0.0035952653,0.00612434,0.00037889445,0.00019150143,0.000011216309,0.00029110422,0.000046078956,0.00048420113],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9959601,0.0002713406,0.0014311166,0.0010082001,0.00065193226,0.000677309],"domain_scores_gemma":[0.99729717,0.00026256597,0.0010917515,0.00020013,0.00066564145,0.00048272303],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00042673515,0.0007320201,0.001603784,0.0010097264,0.00058713654,0.00016050666,0.00026115155,0.0016273042,0.00009439489],"category_scores_gemma":[0.00095039053,0.0006058415,0.00019510635,0.00081370946,0.001932476,0.0002465667,0.00036439448,0.0038648178,6.3384806e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0238493,0.0012020644,0.28562307,0.01213857,0.017224172,0.03638658,0.023393437,0.0036205205,0.20209184,0.017834546,0.109132655,0.26750323],"study_design_scores_gemma":[0.015591544,0.0062205703,0.66887206,0.0037822346,0.0010378655,0.09063777,0.00841207,0.009232217,0.0045936755,0.18779677,0.0011826527,0.0026405384],"about_ca_topic_score_codex":0.00007260208,"about_ca_topic_score_gemma":0.00010528441,"teacher_disagreement_score":0.383249,"about_ca_system_score_codex":0.0002642725,"about_ca_system_score_gemma":0.0012665726,"threshold_uncertainty_score":0.9996688},"labels":[],"label_agreement":null},{"id":"W3213337307","doi":"10.1038/s41467-021-26850-3","title":"Leveraging machine learning essentiality predictions and chemogenomic interactions to identify antifungal targets","year":2021,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sinai Health System; Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"Japan Society for the Promotion of Science; National Institutes of Health; Canadian Institutes of Health Research; Genome Canada; Ontario Genomics; National Institute of Allergy and Infectious Diseases; Japan Agency for Medical Research and Development; Canadian Institute for Advanced Research; Foundation for the National Institutes of Health","keywords":"Candida albicans; Computational biology; Antifungal; Genome; Function (biology); Biology; Gene; Fungal pathogen; Transfer RNA; Functional genomics; Genomics; Genetics; Microbiology; RNA","score_opus":0.029498976894315732,"score_gpt":0.36065331747425183,"score_spread":0.3311543405799361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3213337307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94170576,0.017462038,0.0045911074,0.02402425,0.0005047072,0.00050728425,0.000094606556,0.000257458,0.010852774],"genre_scores_gemma":[0.98910576,0.0010377934,0.006193543,0.0007234674,0.00008172057,0.00002306037,0.00040076548,0.000020118829,0.0024137818],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988158,0.00016729327,0.00029107853,0.00034227208,0.0001825179,0.00020108574],"domain_scores_gemma":[0.99788153,0.00022120093,0.00006922267,0.0012626274,0.0003802315,0.00018521072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029336955,0.00013822263,0.0002434434,0.000105937266,0.00071071234,0.00007237094,0.0002200551,0.00014291018,0.00019800574],"category_scores_gemma":[0.0008964307,0.00014473559,0.000110397996,0.0004191816,0.000113193586,0.00014286835,0.0004265063,0.0015741555,0.000035071887],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010877787,0.00067692436,0.6883696,0.000114800234,0.00029688043,0.000027077554,0.0013788019,0.000035648685,0.29779136,0.0021539968,0.0063503236,0.0026958552],"study_design_scores_gemma":[0.000465225,0.00002866739,0.8652973,0.00011703974,0.00018625024,0.00012284724,0.0007850903,0.0019097374,0.005971562,0.0001165716,0.12481795,0.00018175352],"about_ca_topic_score_codex":0.000055969973,"about_ca_topic_score_gemma":0.0009388624,"teacher_disagreement_score":0.2918198,"about_ca_system_score_codex":0.000120891615,"about_ca_system_score_gemma":0.00015548387,"threshold_uncertainty_score":0.683901},"labels":[],"label_agreement":null},{"id":"W3216839499","doi":"10.21203/rs.3.rs-1009236/v1","title":"Development and Evaluation of a Novel Fast Broad-Range ITS/LSU DNA PCR and Sequencing Assay (FBR-PCR/S) for Rapid Diagnosis of Invasive Fungal Diseases: Multi-Year Experience in a Large Canadian Healthcare Zone and a Literature Review","year":2021,"lang":"en","type":"review","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Alberta Precision Laboratories; Calgary Laboratory Services","keywords":"Biology; Polymerase chain reaction; DNA extraction; Real-time polymerase chain reaction; Aspergillus; Internal medicine; Microbiology; Medicine; Gene; Genetics","score_opus":0.25146579060165425,"score_gpt":0.47418076089996963,"score_spread":0.22271497029831538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3216839499","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021587988,0.9698172,0.000014351239,0.00018292066,0.000019811083,0.0064157275,0.0019462929,0.000005310423,0.000010347568],"genre_scores_gemma":[0.037857264,0.958624,0.00072350405,0.00005863337,0.00003739669,0.002002927,0.00062196556,0.000036629346,0.0000376911],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99534786,0.0010511639,0.0009150846,0.00085525546,0.0011787046,0.0006519592],"domain_scores_gemma":[0.9955594,0.0009288032,0.00024392577,0.00044683498,0.0021941278,0.00062689837],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00500458,0.0003538662,0.0019362692,0.0005664131,0.00017762039,0.00004803412,0.00013319578,0.00032376221,0.000046073565],"category_scores_gemma":[0.007016463,0.00029317927,0.00018112118,0.0011075974,0.00017882806,0.00015593345,0.00014835355,0.00062846293,4.7610519e-7],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007107309,0.0002567572,0.025560545,0.53992915,0.00012668937,0.00011247447,0.007084284,3.955546e-8,0.000019582902,0.000063031264,0.000102686674,0.42667368],"study_design_scores_gemma":[0.0037931858,0.000480956,0.024690162,0.9020773,0.0006679554,0.0000687776,0.009892033,0.00012782488,0.000046257694,0.0000027120122,0.05759872,0.0005541001],"about_ca_topic_score_codex":0.0018958272,"about_ca_topic_score_gemma":0.070608445,"teacher_disagreement_score":0.42611957,"about_ca_system_score_codex":0.0010048045,"about_ca_system_score_gemma":0.00797317,"threshold_uncertainty_score":0.999952},"labels":[],"label_agreement":null},{"id":"W3217196012","doi":"10.1093/ofid/ofab510","title":"Coronavirus Disease 2019–Associated Invasive Fungal Infection","year":2021,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"MSD Australia; National Institutes of Health; Astellas Pharma; Regeneron Pharmaceuticals; Amplyx; Cidara Therapeutics; University of Alabama; Centers for Disease Control and Prevention; University of Alabama at Birmingham; Gilead Sciences; Pfizer; Eli Lilly and Company","keywords":"Medicine; Mucormycosis; Disease; Incidence (geometry); Immunology; Aspergillosis; Epidemiology; Coronavirus; Middle East respiratory syndrome coronavirus; Intensive care medicine; Cryptococcosis; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Pathology","score_opus":0.03819570448948929,"score_gpt":0.34238912541182887,"score_spread":0.3041934209223396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3217196012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9744395,0.0017530605,0.00006232251,0.00081306713,0.0004638964,0.00088345225,0.00036763353,0.00023080391,0.020986268],"genre_scores_gemma":[0.98855406,0.00069893105,0.000010462038,0.002320949,0.0000923787,0.00009949746,0.000768276,0.000043897904,0.0074115656],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979883,0.0001712792,0.0003501468,0.00061552256,0.00038213868,0.0004926579],"domain_scores_gemma":[0.9979357,0.00016334568,0.0001488253,0.00061430316,0.00047760466,0.0006602093],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013505052,0.00027510812,0.00048488303,0.0000746118,0.0004391924,0.00022871602,0.00013640965,0.00011604409,0.0018215604],"category_scores_gemma":[0.0020097394,0.000264091,0.00033206283,0.0004640683,0.00013618628,0.0005186143,0.00032183257,0.00023453298,0.0004095124],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005344888,0.0016825425,0.9787364,0.000086403816,0.00020083817,0.0005176661,0.00001967231,0.000010704915,0.00042727083,0.0008573347,0.013167762,0.0037588999],"study_design_scores_gemma":[0.0022854393,0.00027501545,0.98780155,0.00021371357,0.0004535682,0.000033453143,0.00007525272,0.000021870539,0.00058229634,0.0024202436,0.005533181,0.0003044299],"about_ca_topic_score_codex":0.0007075105,"about_ca_topic_score_gemma":0.003304437,"teacher_disagreement_score":0.014114546,"about_ca_system_score_codex":0.00037885245,"about_ca_system_score_gemma":0.0014161146,"threshold_uncertainty_score":0.9999811},"labels":[],"label_agreement":null},{"id":"W37823100","doi":"10.1155/2008/787689","title":"Fatal Disseminated <i>Trichosporon asahii</i> Infection in a Child with Acute Lymphoblastic Leukemia","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Voriconazole; Trichosporon; Lymphoblastic Leukemia; Autopsy; Medicine; Leukemia; Immunology; Antifungal; Biology; Dermatology; Internal medicine","score_opus":0.002638870675045127,"score_gpt":0.22294587161571547,"score_spread":0.22030700094067035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W37823100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968274,0.0015542932,0.00051641575,0.00026122603,0.00022825315,0.0001430044,0.000026446667,0.000010033165,0.0004329215],"genre_scores_gemma":[0.99860424,0.0005630506,0.000012440284,0.0005967342,0.00014492775,0.0000013491523,0.00002806101,0.000012593641,0.000036590387],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988433,0.00004139574,0.00041442062,0.00018804119,0.000098314034,0.00041450025],"domain_scores_gemma":[0.9981733,0.000110831104,0.00013942672,0.000099060235,0.00015248236,0.0013249039],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033337047,0.00015587897,0.00040807738,0.00035677876,0.000098449535,0.000012508589,0.000055814322,0.00021893565,0.00015143686],"category_scores_gemma":[0.0005111468,0.00011141822,0.00009033357,0.0003044418,0.00040153338,0.000071612856,0.000009585583,0.0004235942,0.0000029854102],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006672334,0.000096185875,0.9838763,0.00006458438,0.00012768041,0.0066979923,0.00009268092,0.0000020252935,0.0012872153,0.00004354588,0.00038685344,0.0066577247],"study_design_scores_gemma":[0.0029890935,0.0013347692,0.97254527,0.00055543834,0.00022509687,0.019801164,0.00007815366,0.0000063738644,0.00021482352,0.000033550896,0.002073906,0.0001423701],"about_ca_topic_score_codex":0.0053082844,"about_ca_topic_score_gemma":0.07696011,"teacher_disagreement_score":0.071651824,"about_ca_system_score_codex":0.00060083147,"about_ca_system_score_gemma":0.0022417998,"threshold_uncertainty_score":0.939883},"labels":[],"label_agreement":null},{"id":"W37984784","doi":"10.1155/2013/929717","title":"Ten‐Year Review of Candidemia in a Canadian Tertiary Care Centre: Predominance of Non‐<i>albicans Candida</i> Species","year":2013,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Vancouver General Hospital; Children's & Women's Health Centre of British Columbia; University of British Columbia","funders":"","keywords":"Candida albicans; Tertiary care; Microbiology; Fungemia; Medicine; Intensive care medicine; Antifungal; Biology; Family medicine","score_opus":0.002970588477587508,"score_gpt":0.22082765213496516,"score_spread":0.21785706365737764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W37984784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94648784,0.05015878,0.000004236376,0.0020299542,0.00017029737,0.00034458766,0.00024987897,0.0000017287932,0.0005526732],"genre_scores_gemma":[0.9877268,0.010165402,0.00001670173,0.0019149531,0.00007404459,0.0000036260778,0.000025337915,0.000009132307,0.000063971325],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99857706,0.00008631671,0.0006589277,0.00015879462,0.00009300546,0.0004259112],"domain_scores_gemma":[0.99740213,0.00008368979,0.00022529931,0.00015983047,0.00041688237,0.0017121673],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021659328,0.00013901056,0.00069801154,0.00024813286,0.000042897213,0.0000044687217,0.00011534796,0.00016435099,0.0010853478],"category_scores_gemma":[0.0011993625,0.00010607392,0.00015532917,0.00017738501,0.000564822,0.000047956742,0.0000116154715,0.0002863444,0.0000026375226],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024693589,0.000029989122,0.98507386,0.0020927365,0.0000491096,0.00018206603,0.00022052236,2.2000675e-7,0.00082975347,0.00002338127,0.009353099,0.002120591],"study_design_scores_gemma":[0.0011686536,0.00025476565,0.9831417,0.00723809,0.00013152973,0.0002976297,0.00046650827,0.000001842355,0.00013778651,0.00002086569,0.0070349714,0.00010561604],"about_ca_topic_score_codex":0.5856533,"about_ca_topic_score_gemma":0.89784175,"teacher_disagreement_score":0.31218845,"about_ca_system_score_codex":0.00038618184,"about_ca_system_score_gemma":0.0076420773,"threshold_uncertainty_score":0.9998278},"labels":[],"label_agreement":null},{"id":"W38915918","doi":"10.7573/dic.2023-9-2","title":"Invasive fungal infections in critically ill children: epidemiology, risk factors and antifungal drugs.","year":2024,"lang":"en","type":"article","venue":"PubMed","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"","keywords":"Computer science","score_opus":0.024800661074687827,"score_gpt":0.28365588544281367,"score_spread":0.25885522436812586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W38915918","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914882,0.0026988122,0.00011130186,0.0014467371,0.00029206483,0.00083756115,0.00008893293,0.00014346118,0.0028929294],"genre_scores_gemma":[0.99750763,0.00094656006,0.000086889944,0.00068671076,0.00015968789,0.00019392537,0.00003079982,0.000021898153,0.0003658703],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980953,0.00022772622,0.00042167626,0.00054896675,0.00014050723,0.00056581973],"domain_scores_gemma":[0.997771,0.0015088634,0.000037042482,0.0002572205,0.00012831777,0.00029754406],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0011359644,0.00020583006,0.00046945785,0.00021239971,0.00009854169,0.000031556912,0.000060012513,0.00018921787,0.00005924594],"category_scores_gemma":[0.010649717,0.00015681439,0.00014868123,0.0003361619,0.00034693067,0.00016779125,0.000058430513,0.00065643375,0.00002121413],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047888218,0.00011253748,0.9824402,0.00010326108,0.000083694904,0.00003365977,0.00017859931,9.2054665e-7,0.000022052902,0.0008758827,0.00079101225,0.015310331],"study_design_scores_gemma":[0.00039538142,0.000069782145,0.9972798,0.000061648076,0.00011317741,0.00004172771,0.0002076198,0.000040206727,0.00013829756,0.0009692523,0.0005324155,0.00015064958],"about_ca_topic_score_codex":0.00048553682,"about_ca_topic_score_gemma":0.0004735469,"teacher_disagreement_score":0.015159681,"about_ca_system_score_codex":0.00011826939,"about_ca_system_score_gemma":0.00010231502,"threshold_uncertainty_score":0.997684},"labels":[],"label_agreement":null},{"id":"W4200175140","doi":"10.1111/ajt.16935","title":"Risk factors of invasive fungal infections in liver transplant recipients: A systematic review and meta-analysis","year":2021,"lang":"en","type":"review","venue":"American Journal of Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Medicine; Meta-analysis; Intensive care medicine; Liver transplantation; Internal medicine; Immunology; Transplantation","score_opus":0.05361949823320537,"score_gpt":0.34343913441053064,"score_spread":0.28981963617732526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200175140","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0041603697,0.9939092,0.0005492676,0.000017042357,0.000022839908,0.00086648663,0.0004582585,0.0000035854507,0.000012945079],"genre_scores_gemma":[0.05012876,0.9494739,0.00017442736,0.00003521187,0.000008467388,0.000023692977,0.000119956945,0.00001753644,0.00001800175],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9957394,0.0012622927,0.0021384102,0.00026723038,0.00043758252,0.00015505674],"domain_scores_gemma":[0.99553144,0.001115623,0.0026180749,0.0002711358,0.0003294822,0.00013424573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009993066,0.00033662515,0.009336999,0.00075773656,0.00003408899,0.000011218385,0.000107840184,0.00009572379,0.00009228317],"category_scores_gemma":[0.00029221753,0.00020995703,0.0031478875,0.0016535714,0.00015047529,0.00012831538,0.000004258301,0.00054960256,9.590053e-7],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005342603,0.0002671044,0.007782588,0.85097677,0.13738805,0.00032306646,0.0011833876,0.0000050704175,8.2665287e-7,0.0000047580274,0.000004046758,0.0020108977],"study_design_scores_gemma":[0.00017757475,0.00042117908,0.0018233215,0.10203601,0.8945602,0.00058029057,0.0002027005,7.3758144e-7,0.000002371249,8.481455e-7,0.000046562447,0.00014821034],"about_ca_topic_score_codex":0.00024602452,"about_ca_topic_score_gemma":0.00046820057,"teacher_disagreement_score":0.75717217,"about_ca_system_score_codex":0.000098427685,"about_ca_system_score_gemma":0.00033755196,"threshold_uncertainty_score":0.8561799},"labels":[],"label_agreement":null},{"id":"W4200176605","doi":"10.1099/acmi.cc2021.po0194","title":"Conducting genetic interaction analysis with CRISPR-Cas9-based strategies in Candida albicans","year":2021,"lang":"en","type":"article","venue":"Access Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Candida albicans; CRISPR; Biology; Corpus albicans; Gene; Epistasis; Antifungal drug; Genetic screen; Cas9; Fungal pathogen; Genetics; Genetic analysis; Pathogen; Virulence; Computational biology; Mutant","score_opus":0.05535697631270393,"score_gpt":0.3606845560665887,"score_spread":0.3053275797538848,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200176605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99448687,0.00031280503,0.0035913351,0.00062121055,0.00007011443,0.00012128431,0.00001237525,0.000021331245,0.0007626569],"genre_scores_gemma":[0.9982384,0.000026960217,0.0006296948,0.00071374536,0.000031722746,0.000010433036,0.0001779424,0.0000093751605,0.00016174534],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99889684,0.0001462626,0.0002685312,0.00039963034,0.00004174993,0.00024700712],"domain_scores_gemma":[0.99925894,0.00013398871,0.00009069046,0.0002915843,0.00016474281,0.00006007932],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001237386,0.00012879202,0.00040408073,0.00018033815,0.000047538124,0.000044284407,0.000090260575,0.00009935289,0.00083632],"category_scores_gemma":[0.0001188915,0.00010199039,0.00008718827,0.0007287743,0.0001235647,0.00012831816,0.00003209513,0.00022302517,0.0000071284185],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025174592,0.00010185408,0.76493746,0.000060627972,0.00024234875,0.00023685402,0.00011613728,0.00054388517,0.23297268,0.000015844282,0.000087874214,0.00043271764],"study_design_scores_gemma":[0.0019834598,0.000274057,0.8686153,0.00014103662,0.0009801752,0.00017366579,0.0055832444,0.00054163573,0.119982004,0.000042237705,0.0013428129,0.0003403691],"about_ca_topic_score_codex":0.0015324833,"about_ca_topic_score_gemma":0.036632568,"teacher_disagreement_score":0.11299067,"about_ca_system_score_codex":0.000097841774,"about_ca_system_score_gemma":0.00054593885,"threshold_uncertainty_score":0.98094636},"labels":[],"label_agreement":null},{"id":"W4200282704","doi":"10.1093/ofid/ofab466.1270","title":"1076. Activity of Rezafungin and Comparator Antifungal Agents Tested Against a Worldwide Collection of Contemporaneous Invasive Fungal Isolates (2019-2020)","year":2021,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Echinocandin; Cryptococcus neoformans; Candida parapsilosis; Aspergillus fumigatus; Microbiology; Candida krusei; Candida dubliniensis; Candida tropicalis; Medicine; Candida glabrata; Broth microdilution; Candida albicans; Fluconazole; Antifungal; Antimicrobial; Corpus albicans; Biology; Minimum inhibitory concentration","score_opus":0.016496892290178408,"score_gpt":0.2885600702754159,"score_spread":0.2720631779852375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200282704","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908258,0.0017730091,0.0000349412,0.00020507908,0.00015661916,0.0010425006,0.0003187075,0.00005008397,0.0055932915],"genre_scores_gemma":[0.99747413,0.0005327877,0.00004556454,0.00024042156,0.000027239545,0.000029943616,0.0001137535,0.000029834984,0.001506319],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981544,0.00020496227,0.00051558047,0.000522682,0.00027986334,0.00032248546],"domain_scores_gemma":[0.997882,0.00042062363,0.00037021964,0.00047565508,0.00058320013,0.0002682835],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00017857405,0.00026847405,0.0009189595,0.000118061274,0.0002104981,0.00006809602,0.00013072243,0.00011619469,0.00022214289],"category_scores_gemma":[0.0009671444,0.00025609898,0.00020856442,0.00063874276,0.00025493375,0.00030432452,0.0002377737,0.000191186,0.000009460122],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018547471,0.0013955884,0.92946225,0.00047432716,0.00032178898,0.00018277434,0.00009363954,0.000011461884,0.057213884,0.000061031533,0.007812506,0.0011159886],"study_design_scores_gemma":[0.003531812,0.00085184537,0.93925416,0.00057651964,0.00034751327,0.0001375419,0.00044212933,0.00024042682,0.05382584,0.00016240533,0.0003445204,0.00028529364],"about_ca_topic_score_codex":0.0005066628,"about_ca_topic_score_gemma":0.001770055,"teacher_disagreement_score":0.00979189,"about_ca_system_score_codex":0.00011596562,"about_ca_system_score_gemma":0.000877478,"threshold_uncertainty_score":0.99998915},"labels":[],"label_agreement":null},{"id":"W4200293211","doi":"10.1016/j.cub.2021.09.071","title":"Antifungal drug resistance: Deciphering the mechanisms governing multidrug resistance in the fungal pathogen Candida glabrata","year":2021,"lang":"en","type":"letter","venue":"Current Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Candida glabrata; Fungal pathogen; Microbiology; Drug resistance; Multiple drug resistance; Pathogen; Antifungal; Antifungal drug; Antifungal drugs; Human pathogen; Gene; Genetics","score_opus":0.033792598927352216,"score_gpt":0.30313009147518705,"score_spread":0.26933749254783484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200293211","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.112114534,0.19530164,0.0030219164,0.6600842,0.010108974,0.0051636253,0.0031427378,0.000318821,0.010743546],"genre_scores_gemma":[0.57465285,0.010603571,0.002698143,0.35174617,0.013919506,0.000910336,0.010720231,0.00044391822,0.034305282],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99404174,0.0015008425,0.0010119652,0.0014641528,0.00078115927,0.001200132],"domain_scores_gemma":[0.99598265,0.0012057788,0.00049200904,0.00198755,0.00023373682,0.00009826583],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.001854024,0.0007503876,0.0011925357,0.000113578215,0.00046341115,0.00011751215,0.0011355146,0.0007802813,0.0002511119],"category_scores_gemma":[0.00091850397,0.00044965697,0.0004809657,0.00062127213,0.0005071033,0.000089790556,0.00030276683,0.0049856384,0.000059808935],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052011356,0.00017236959,0.02302041,0.0014300693,0.00016725303,0.0019667211,0.0017415751,5.222297e-7,0.004397703,0.0017597614,0.9634844,0.001339088],"study_design_scores_gemma":[0.00097366585,0.00003677338,0.014729753,0.0012844855,0.00020525906,0.000036347225,0.00075362134,0.000013728715,0.00016533166,0.0009915669,0.9802602,0.00054925616],"about_ca_topic_score_codex":0.00010339061,"about_ca_topic_score_gemma":0.0077589974,"teacher_disagreement_score":0.4625383,"about_ca_system_score_codex":0.0003442118,"about_ca_system_score_gemma":0.0006860814,"threshold_uncertainty_score":0.9997955},"labels":[],"label_agreement":null},{"id":"W4200320070","doi":"10.1093/femsyr/foab060","title":"A data library of <i>Candida albicans</i> functional genomic screens","year":2021,"lang":"en","type":"article","venue":"FEMS Yeast Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Universities Space Research Association; Canadian Geriatrics Society","keywords":"Biology; Candida albicans; Computational biology; Microbiology","score_opus":0.15409028738308295,"score_gpt":0.37561918855073195,"score_spread":0.221528901167649,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200320070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9185713,0.0020752866,0.00019041203,0.0028315114,0.00009379643,0.00027742414,0.000826838,0.00003801469,0.07509544],"genre_scores_gemma":[0.9654252,0.00023187285,0.00059965136,0.00018124195,0.00033682637,0.000006469523,0.0009790421,0.000022781654,0.032216903],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980041,0.000112603084,0.00023917707,0.0004668466,0.0008153014,0.00036201393],"domain_scores_gemma":[0.99806523,0.00015948982,0.000029189503,0.0012594799,0.0002810641,0.00020551834],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00070056337,0.00008508241,0.00024156127,0.000104461564,0.00009941876,0.000029237208,0.00027472508,0.00007888347,0.0048641353],"category_scores_gemma":[0.00039722148,0.0000747624,0.00006987124,0.0005562878,0.0003016832,0.00017714933,0.0005847462,0.0004618144,0.00020527346],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016975949,0.00068529777,0.45519593,0.0004261056,0.0001799924,0.00042017823,0.000103956525,0.0000018577005,0.28861567,0.0021278209,0.24016665,0.010378918],"study_design_scores_gemma":[0.0009997534,0.00014043669,0.81873184,0.0001541311,0.00002687324,0.000055332675,0.00061925995,0.00023881497,0.009251456,0.00040107415,0.16927265,0.00010837221],"about_ca_topic_score_codex":0.0000989568,"about_ca_topic_score_gemma":0.00014621322,"teacher_disagreement_score":0.3635359,"about_ca_system_score_codex":0.00004064839,"about_ca_system_score_gemma":0.001566259,"threshold_uncertainty_score":0.99604553},"labels":[],"label_agreement":null},{"id":"W4200334987","doi":"10.1099/acmi.cc2021.po0026","title":"Role of SAGA complex subunits in gene regulation of Candida albicans","year":2021,"lang":"en","type":"article","venue":"Access Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; Acetyltransferase; Candida albicans; Histone acetyltransferase; Genetics; Gene; Transcription factor; Cell biology; Mutant; Regulation of gene expression; Acetylation","score_opus":0.03645216894838572,"score_gpt":0.3094539248554682,"score_spread":0.2730017559070825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200334987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976878,0.0006199437,0.000029639754,0.00018780043,0.00003017388,0.000113903305,0.000049792532,0.0000052597397,0.0012756556],"genre_scores_gemma":[0.9989662,0.000072791656,0.000254303,0.0001308604,0.000016939204,0.0000020650632,0.00030587587,0.000005694619,0.00024524747],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99926907,0.000057368812,0.00031936596,0.00018082431,0.000034400025,0.00013900077],"domain_scores_gemma":[0.99936205,0.000065195934,0.000105495215,0.0002473349,0.00019324267,0.000026663705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111503694,0.00006876727,0.00034538325,0.00006748273,0.000013070396,0.0000019721947,0.00009081097,0.00009606218,0.0006454896],"category_scores_gemma":[0.00009392547,0.000062769774,0.000050365168,0.00025097126,0.00013939492,0.000038855385,0.00006121449,0.0000774811,0.0000025420816],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106423955,0.000070112364,0.36000922,0.000046259946,0.0000151140775,0.0000034920204,0.00007246473,0.0000037546338,0.6389335,0.00010204422,0.00010172875,0.00053590455],"study_design_scores_gemma":[0.00039894663,0.00003746508,0.58759695,0.000028200604,0.000013279078,0.000013118984,0.000084923406,0.000010552367,0.4111223,0.00013217266,0.00052951736,0.000032557786],"about_ca_topic_score_codex":0.00059201324,"about_ca_topic_score_gemma":0.0036591308,"teacher_disagreement_score":0.22781119,"about_ca_system_score_codex":0.00003457303,"about_ca_system_score_gemma":0.00016634897,"threshold_uncertainty_score":0.70676583},"labels":[],"label_agreement":null},{"id":"W4200361734","doi":"10.1093/ofid/ofab466.1176","title":"982. Effect of Hepatic Impairment on the Safety and Pharmacokinetics of Rezafungin","year":2021,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Altasciences (Canada)","funders":"","keywords":"Medicine; Tolerability; Caspofungin; Pharmacokinetics; Internal medicine; Echinocandin; Population; Body mass index; Antifungal; Adverse effect; Gastroenterology; Fluconazole","score_opus":0.008115522000828962,"score_gpt":0.29453527471766394,"score_spread":0.28641975271683495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200361734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988388,0.0010504915,0.000023825076,0.0007623236,0.00006237741,0.0007828588,0.00009077643,0.00001295774,0.00882638],"genre_scores_gemma":[0.9984655,0.0006328408,0.000008210127,0.00038951726,0.00001355439,0.000018497209,0.00002400204,0.000011345201,0.00043653944],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990499,0.00015748866,0.00024995627,0.00019204535,0.00019904815,0.00015156707],"domain_scores_gemma":[0.998924,0.0004292019,0.00009915053,0.0003510362,0.00010244913,0.000094160496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024053798,0.00012074777,0.00037486968,0.00002669932,0.00008892378,0.000017511336,0.000081995495,0.000030084977,0.0004067069],"category_scores_gemma":[0.00043346436,0.000074420765,0.00011999371,0.00016501715,0.00012252768,0.00004555232,0.00013795888,0.00008344695,0.000005298713],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016302285,0.000508119,0.98736745,0.0004502711,0.00014687821,0.000016582893,0.000038990216,0.000010300716,0.0028755693,0.000922943,0.0019277392,0.0041049113],"study_design_scores_gemma":[0.0037332363,0.0032810038,0.93119216,0.00059405045,0.0005819255,0.000018674176,0.00016136956,0.00019190769,0.05772902,0.00045322985,0.001912538,0.00015087113],"about_ca_topic_score_codex":0.00005859231,"about_ca_topic_score_gemma":0.000039537525,"teacher_disagreement_score":0.05617529,"about_ca_system_score_codex":0.00003959233,"about_ca_system_score_gemma":0.0001120769,"threshold_uncertainty_score":0.44531554},"labels":[],"label_agreement":null},{"id":"W4200416029","doi":"10.1099/acmi.cc2021.po0006","title":"Exploiting diverse chemical collections to uncover novel antifungals","year":2021,"lang":"en","type":"article","venue":"Access Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Candida auris; Fluconazole; Cryptococcus neoformans; Efflux; Microbiology; Biology; Candida albicans; Chemical library; Candida glabrata; Antifungal; Biochemistry; Small molecule","score_opus":0.05422900453112521,"score_gpt":0.3427113968012757,"score_spread":0.2884823922701505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200416029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99181914,0.00012802357,0.0014781494,0.001281334,0.00032782217,0.00021636096,0.00009148436,0.00006123781,0.0045964727],"genre_scores_gemma":[0.988379,0.000026500702,0.0014134366,0.0038388139,0.00015843211,0.000014569127,0.00012535207,0.000015392998,0.0060285074],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99883413,0.000034874432,0.0002591491,0.0004737556,0.000056039607,0.00034204917],"domain_scores_gemma":[0.99907637,0.00012273966,0.00004827181,0.00034018003,0.0002778153,0.00013460263],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010442407,0.00013880659,0.0003466955,0.00007852825,0.00015715628,0.000043338663,0.00014346391,0.00015414297,0.0009747861],"category_scores_gemma":[0.0005712784,0.00012831204,0.00012345795,0.00061854505,0.00009491691,0.000101719816,0.00027241258,0.00020028857,0.00013360094],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012377201,0.00018542168,0.044165656,0.000033030134,0.00005382818,0.000053029402,0.00007749985,0.0000022064123,0.93440986,0.00009398797,0.020560894,0.00024082877],"study_design_scores_gemma":[0.0013075857,0.000083642335,0.020846473,0.00009266172,0.00008897392,0.0002980358,0.00057518797,0.000005003219,0.9308642,0.00005575601,0.04553706,0.00024541284],"about_ca_topic_score_codex":0.0000586041,"about_ca_topic_score_gemma":0.00014646492,"teacher_disagreement_score":0.024976166,"about_ca_system_score_codex":0.00010808004,"about_ca_system_score_gemma":0.0002313719,"threshold_uncertainty_score":0.9999384},"labels":[],"label_agreement":null},{"id":"W4200417643","doi":"10.1093/mmy/myab079","title":"Four genomic clades of <i>Candida auris</i> identified in Canada, 2012–2019","year":2021,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Ontario; BC Centre for Disease Control; University of Toronto; Ste. Anne's Hospital; Alberta Hospital Edmonton; University of Alberta; University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency of Canada","keywords":"Candida auris; Clade; Biology; Outbreak; Phylogenetic tree; Microbiology; Virology; Genetics; Gene; Antifungal","score_opus":0.011385216888499559,"score_gpt":0.25405274762664243,"score_spread":0.24266753073814287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200417643","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909741,0.0015518705,0.00005733205,0.0040852074,0.00046365985,0.00013881584,0.000015650257,0.000008208063,0.002705109],"genre_scores_gemma":[0.9942167,0.00031308035,0.00009214676,0.0023178451,0.00010666142,0.0000075991543,0.000026234104,0.000010069452,0.0029096676],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99830097,0.00010837823,0.0004887673,0.00029603546,0.000458937,0.00034690648],"domain_scores_gemma":[0.99892855,0.0003375633,0.00007283984,0.0003044807,0.00009876666,0.00025777982],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003929533,0.000105358136,0.0005434784,0.000056109697,0.000023313834,0.0000024081469,0.00012681595,0.00019555872,0.0050376696],"category_scores_gemma":[0.0010966061,0.00009272315,0.00007220064,0.00020658429,0.00015901493,0.00002662659,0.000077328354,0.00038072377,0.000033529708],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036264412,0.00022653185,0.88050604,0.00023800778,0.00007125742,0.0034978322,0.000092987866,0.0000015049194,0.041293006,0.00041211201,0.06916864,0.0041294163],"study_design_scores_gemma":[0.0014589264,0.00007922095,0.9830167,0.00008564007,0.0000370142,0.00010524506,0.0002353558,0.000039353436,0.0031603377,0.00025561283,0.011439012,0.00008754548],"about_ca_topic_score_codex":0.2851396,"about_ca_topic_score_gemma":0.9391232,"teacher_disagreement_score":0.65398365,"about_ca_system_score_codex":0.00032850238,"about_ca_system_score_gemma":0.006445011,"threshold_uncertainty_score":0.9991875},"labels":[],"label_agreement":null},{"id":"W4200424134","doi":"10.3389/fmicb.2021.779176","title":"The Importance of Vacuolar Ion Homeostasis and Trafficking in Hyphal Development and Virulence in Candida albicans","year":2021,"lang":"en","type":"review","venue":"Frontiers in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Concordia University; National Natural Science Foundation of China","keywords":"Vacuole; Candida albicans; Biology; Virulence; Cell biology; ATPase; Corpus albicans; Homeostasis; Cytosol; Microbiology; Biochemistry; Cytoplasm; Enzyme; Gene","score_opus":0.02145510017889428,"score_gpt":0.2958000340474127,"score_spread":0.2743449338685184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200424134","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15241912,0.8468798,0.000022639339,0.000030209118,0.00016415787,0.00043677172,0.000022094735,0.0000029886032,0.00002226469],"genre_scores_gemma":[0.008023238,0.9902506,0.0015030149,0.000043061376,0.000013482238,0.00002961378,0.00007743701,0.000014820317,0.000044719724],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980216,0.00026011927,0.00082597544,0.00050192897,0.00005024374,0.00034011833],"domain_scores_gemma":[0.99930793,0.00017578098,0.00021083259,0.00023493425,0.000027071868,0.000043474935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008031211,0.0002477397,0.0016300725,0.00021942682,0.000040988078,0.000007491248,0.00012131491,0.0003335531,0.0000048296615],"category_scores_gemma":[0.00016906521,0.00017787074,0.00007656496,0.0003421857,0.0003261005,0.00002585747,0.000080909886,0.0005031243,2.7421538e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006492361,0.00005641963,0.18502061,0.0034212526,0.000064914515,0.00012575836,0.0005112191,1.335719e-7,0.00007646214,0.000015079574,0.00023917804,0.81040406],"study_design_scores_gemma":[0.0011157892,0.000093118106,0.02771295,0.0152025195,0.00013706133,0.00014953663,0.0015423207,0.0000035862904,0.00007710768,0.000019087469,0.9535534,0.00039352415],"about_ca_topic_score_codex":0.00005786564,"about_ca_topic_score_gemma":0.0043817265,"teacher_disagreement_score":0.95331424,"about_ca_system_score_codex":0.00029361856,"about_ca_system_score_gemma":0.00056636124,"threshold_uncertainty_score":0.72533584},"labels":[],"label_agreement":null},{"id":"W4200453933","doi":"10.3390/genes13010019","title":"Genetic Diversity and Dispersal of Aspergillus fumigatus in Arctic Soils","year":2021,"lang":"en","type":"article","venue":"Genes","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University","funders":"Michael G. DeGroote Institute for Infectious Disease Research, McMaster University; Natural Sciences and Engineering Research Council of Canada; Mitacs; McMaster University","keywords":"Aspergillus fumigatus; Biology; Genotype; Biological dispersal; Microsatellite; Aspergillosis; Genetic diversity; Ecology; Allele; Microbiology; Genetics; Gene; Population; Immunology; Medicine","score_opus":0.01896403380415069,"score_gpt":0.25046774530072535,"score_spread":0.23150371149657467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200453933","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937538,0.005578151,0.000037555812,0.00015892921,0.000046390112,0.000059381084,0.0000038049004,0.0000058477476,0.00035613682],"genre_scores_gemma":[0.9983818,0.00078181986,0.0003949475,0.00007582322,0.00002876718,7.417638e-7,0.0000023976713,0.0000037484401,0.00032995205],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999449,0.000025473844,0.00011322878,0.0001708611,0.00012225915,0.0001191831],"domain_scores_gemma":[0.999664,0.00002934393,0.000019285946,0.00016510663,0.000062723855,0.000059532147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006309852,0.000057903362,0.00017953292,0.000026147747,0.000057316585,0.0000025445597,0.000027590651,0.000042474727,0.0000857689],"category_scores_gemma":[0.000081091996,0.000051867955,0.000042299824,0.00010027706,0.000090449874,0.000021631015,0.00015748644,0.000056324352,0.0000032284588],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007306704,0.000061289924,0.976762,0.0001672691,0.00001604711,0.00011510024,0.00044925304,0.0000026201024,0.016510403,0.00006142265,0.000010389157,0.0057711294],"study_design_scores_gemma":[0.00048434027,0.000047395963,0.99269557,0.00004895081,0.00003534648,0.000014776975,0.00049706345,0.00007198982,0.005827831,0.00012639353,0.000101057645,0.000049260554],"about_ca_topic_score_codex":0.00041501826,"about_ca_topic_score_gemma":0.0014485008,"teacher_disagreement_score":0.015933584,"about_ca_system_score_codex":0.00002531246,"about_ca_system_score_gemma":0.00006055765,"threshold_uncertainty_score":0.21151139},"labels":[],"label_agreement":null},{"id":"W4200492094","doi":"10.3748/wjg.v27.i47.8138","title":"Impact of intrarectal chromofungin treatment on dendritic cells-related markers in different immune compartments in colonic inflammatory conditions","year":2021,"lang":"en","type":"article","venue":"World Journal of Gastroenterology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Agency for Healthcare Research and Quality","keywords":"CD80; CD11c; CD86; CD40; Immunology; Colitis; Medicine; Immune system; Dendritic cell; Chromogranin A; T cell; Biology; Cytotoxic T cell; In vitro; Immunohistochemistry; Phenotype","score_opus":0.010051411297278382,"score_gpt":0.28413092520961386,"score_spread":0.2740795139123355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200492094","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99885744,0.0002896325,0.000003910473,0.0003264507,0.0002032442,0.00019612892,0.000023276847,0.0000037089567,0.00009620209],"genre_scores_gemma":[0.99957144,0.00016929144,0.00002925136,0.00005005966,0.000025158632,0.0000053896824,0.000027343485,0.000011727244,0.00011031864],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980266,0.00032641046,0.0009538908,0.00016761538,0.00018154035,0.0003439349],"domain_scores_gemma":[0.99912983,0.00013330467,0.00031434034,0.00018980149,0.000100730926,0.00013197018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019622195,0.00018734895,0.00086299726,0.00047806322,0.00001977348,0.0000049078503,0.00007560307,0.000060649225,0.00054131076],"category_scores_gemma":[0.000041989446,0.00014369072,0.0003570881,0.0001959349,0.00013828005,0.00005050614,0.000021658016,0.00039214635,0.000005555163],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00654324,0.002282535,0.9333795,0.000035373683,0.00039216114,0.0016294123,0.0001503531,0.00026705212,0.055092804,0.000011385954,0.00011964534,0.00009654855],"study_design_scores_gemma":[0.008020306,0.0066770334,0.98013467,0.0004554208,0.00009412017,0.00027286322,0.000110109,0.000065854256,0.0040815976,0.00003118139,0.000008026408,0.000048807782],"about_ca_topic_score_codex":0.000021995054,"about_ca_topic_score_gemma":0.0019193985,"teacher_disagreement_score":0.051011205,"about_ca_system_score_codex":0.00093428436,"about_ca_system_score_gemma":0.00021438037,"threshold_uncertainty_score":0.5926973},"labels":[],"label_agreement":null},{"id":"W4200517884","doi":"10.1099/acmi.cc2021.po0157","title":"A novel CRISPRi platform to study the role of essential genes in antifungal drug-resistant Candida albicans isolates","year":2021,"lang":"en","type":"article","venue":"Access Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Candida albicans; Biology; Antifungal drug; Gene; CRISPR; Organism; Genetics; Computational biology","score_opus":0.0191315668362755,"score_gpt":0.31446057209053485,"score_spread":0.29532900525425937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200517884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99636114,0.0016972411,0.00009995062,0.0006199985,0.00015234889,0.0006146384,0.0000857177,0.000016036925,0.00035291785],"genre_scores_gemma":[0.9989951,0.00006485285,0.00014555528,0.0003954931,0.00006546335,0.000025749936,0.00004173967,0.000017134025,0.00024890527],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99842376,0.00008926277,0.0005237648,0.0004880773,0.00008310558,0.00039202807],"domain_scores_gemma":[0.9988661,0.00017913169,0.00010994797,0.0005532713,0.000214618,0.00007695666],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003377602,0.0001926305,0.00054427516,0.00010383261,0.000098083976,0.000027762322,0.0003584691,0.000102033795,0.00035335126],"category_scores_gemma":[0.00014954616,0.00013352121,0.0001138727,0.00046860776,0.00015871009,0.00008300327,0.00031968908,0.00023439167,0.000010700716],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000576863,0.0006104859,0.33609894,0.000024253677,0.000102252656,0.000032825254,0.0008423914,0.0000037662398,0.6607662,0.00006328669,0.000102362006,0.00077640667],"study_design_scores_gemma":[0.0016378716,0.00025045633,0.51791424,0.00005474674,0.000121375764,0.000051118495,0.0065746014,0.00001391658,0.47092792,0.000077720906,0.0021917378,0.00018428962],"about_ca_topic_score_codex":0.002864664,"about_ca_topic_score_gemma":0.025296096,"teacher_disagreement_score":0.18983823,"about_ca_system_score_codex":0.00005984603,"about_ca_system_score_gemma":0.00029379936,"threshold_uncertainty_score":0.9924897},"labels":[],"label_agreement":null},{"id":"W4200569304","doi":"10.1099/acmi.cc2021.po0031","title":"Drug tolerance facilitates the evolution of drug resistance in Candida albicans","year":2021,"lang":"en","type":"article","venue":"Access Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Candida albicans; Biology; Epigenetics; Drug resistance; Fluconazole; Drug; Drug tolerance; Antifungal drug; Corpus albicans; Efflux; Genetic screen; Genetics; Phenotype; Computational biology; Pharmacology; Gene; Microbiology; Antifungal","score_opus":0.011989331902648377,"score_gpt":0.28063279225350424,"score_spread":0.26864346035085584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200569304","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9838916,0.009705081,0.00008873666,0.0037809005,0.00013870487,0.0002104076,0.00006034663,0.000013836043,0.0021103576],"genre_scores_gemma":[0.99172026,0.00020631784,0.00013598031,0.00038140474,0.00002878655,0.0000137939805,0.00004533689,0.0000069847924,0.0074611558],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998776,0.0001883644,0.00036932234,0.0003425583,0.00005912354,0.00026462757],"domain_scores_gemma":[0.99898964,0.00023959905,0.00009595041,0.0004520064,0.0001887289,0.00003407207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031240802,0.00011815025,0.00036173683,0.00004762325,0.000060713388,0.000008802922,0.00022508498,0.00006952237,0.0002069503],"category_scores_gemma":[0.00024056593,0.00008367174,0.00008748891,0.0003768586,0.00034419686,0.00008208686,0.00008446127,0.00021609389,0.000010990927],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044738344,0.00013910818,0.6649694,0.00023507357,0.000035020286,0.000039233753,0.0013999522,0.000008958791,0.32493386,0.0009805614,0.006587028,0.0002244375],"study_design_scores_gemma":[0.0014367442,0.000026788517,0.89926904,0.00030673432,0.000045860415,0.000025906316,0.0025526504,0.000011353781,0.06887446,0.0017709364,0.02547326,0.00020628092],"about_ca_topic_score_codex":0.0014042523,"about_ca_topic_score_gemma":0.054115627,"teacher_disagreement_score":0.2560594,"about_ca_system_score_codex":0.00017399978,"about_ca_system_score_gemma":0.00034532527,"threshold_uncertainty_score":0.9631443},"labels":[],"label_agreement":null},{"id":"W4200627246","doi":"10.1101/2021.12.12.472145","title":"Combined Pan-, Population-, and Phylo-Genomic Analysis of <i>Aspergillus fumigatus</i> Reveals Population Structure and Lineage-Specific Diversity","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, Riverside; Canadian Institute for Advanced Research; National Institutes of Health; National Science Foundation","keywords":"Biology; Population genomics; Genetics; Population; Genome; Genomics; Comparative genomics; Genetic variation; Gene; Structural variation; Aspergillus fumigatus; Evolutionary biology; Microbiology","score_opus":0.013239359522204102,"score_gpt":0.22325185431047595,"score_spread":0.21001249478827186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200627246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99544036,0.0028089778,0.00013571205,0.000061010403,0.00024769292,0.00060271565,0.0006200092,0.000081681595,0.0000018521858],"genre_scores_gemma":[0.9967838,0.0010400552,0.0018548719,0.00009825123,0.00013034536,0.000006776206,0.00003243465,0.000047580317,0.0000059142044],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972365,0.00016071094,0.00072785094,0.0010954742,0.00046157092,0.0003178765],"domain_scores_gemma":[0.9974234,0.000086506465,0.0005527599,0.0011203707,0.00055525283,0.00026169274],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00042351984,0.00045953155,0.0014224789,0.00041799378,0.0002601015,0.00009490391,0.00016493975,0.0005707231,0.000064368505],"category_scores_gemma":[0.0001939849,0.0004745312,0.00026719115,0.000897554,0.00015775017,0.00013095909,0.00068803155,0.00058979227,7.092673e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015346246,0.000073004514,0.7646497,0.0005591256,0.0007483407,0.000023517747,0.00003291129,0.00003621126,0.23361078,0.00009150204,0.00001631292,0.00000514636],"study_design_scores_gemma":[0.0006832393,0.00005307061,0.9882226,0.0002731842,0.0020040688,1.7997872e-8,0.000016877459,0.00032479424,0.008010023,0.000003420662,0.00002199857,0.00038669773],"about_ca_topic_score_codex":0.0005777999,"about_ca_topic_score_gemma":0.00008773486,"teacher_disagreement_score":0.22560075,"about_ca_system_score_codex":0.0002421841,"about_ca_system_score_gemma":0.000115073715,"threshold_uncertainty_score":0.99977064},"labels":[],"label_agreement":null},{"id":"W4205181886","doi":"10.1101/2022.01.06.475277","title":"Acquisition of cross-azole tolerance and aneuploidy in <i>Candida albicans</i> strains evolved to posaconazole","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; University of Manitoba","keywords":"Posaconazole; Biology; Candida albicans; Azole; Drug resistance; Fluconazole; Antifungal drug; Strain (injury); Cross-resistance; Corpus albicans; Genetics; Microbiology; Itraconazole; Antifungal","score_opus":0.013480118317478454,"score_gpt":0.2680648290218251,"score_spread":0.25458471070434663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205181886","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99605024,0.001216524,0.00015284633,0.000306951,0.0003049873,0.0011692592,0.0006440502,0.00010427285,0.00005087754],"genre_scores_gemma":[0.99752057,0.00019618444,0.0012416083,0.00063574006,0.00014122517,0.00016602164,0.0000020159134,0.00007370975,0.000022956434],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99706215,0.00010515921,0.0007368569,0.0010422822,0.00055059826,0.000502966],"domain_scores_gemma":[0.99785066,0.000055724722,0.000280407,0.0010908629,0.0003833534,0.00033900546],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00070696685,0.00042565682,0.000893172,0.00029285144,0.00011147766,0.00006720952,0.00028432807,0.00031771537,0.00035096382],"category_scores_gemma":[0.00016421883,0.0004774893,0.00014620335,0.00057330396,0.00021867084,0.00013565717,0.00040031705,0.0008072059,0.000007641004],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044382227,0.00027035203,0.43867248,0.00095035805,0.00004910442,0.00009227523,0.00004539026,0.00013738695,0.559116,0.0001406822,0.000078859,0.0000032663836],"study_design_scores_gemma":[0.0011545181,0.0002135975,0.9441657,0.00051006104,0.000064897606,3.2963065e-8,0.000020684825,0.00015639368,0.052590214,0.000002762885,0.0007206203,0.0004005273],"about_ca_topic_score_codex":0.00027303482,"about_ca_topic_score_gemma":0.000048955124,"teacher_disagreement_score":0.5065258,"about_ca_system_score_codex":0.00038750033,"about_ca_system_score_gemma":0.00073137,"threshold_uncertainty_score":0.99976766},"labels":[],"label_agreement":null},{"id":"W4205311047","doi":"10.3410/f.739908595.793588524","title":"Faculty Opinions recommendation of Immune cells fold and damage fungal hyphae.","year":2021,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Hypha; Immune system; Microbiology; Fold (higher-order function); Biology; Chemistry; Immunology; Computer science","score_opus":0.029185679122345553,"score_gpt":0.34974097988530184,"score_spread":0.3205553007629563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205311047","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000011017232,0.0046604443,0.00001751578,0.110213645,0.00071428914,0.001307336,0.8829513,0.000027750157,0.00009666225],"genre_scores_gemma":[0.000059640348,0.0018322638,0.0006013871,0.0036204548,0.0002660671,0.000092156246,0.9909215,0.000029293,0.002577223],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9949345,0.000461997,0.0019148091,0.0008309001,0.0014736798,0.00038408945],"domain_scores_gemma":[0.9903828,0.00020373086,0.001309586,0.0019378249,0.005768776,0.00039730582],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016509313,0.0005531329,0.0015042869,0.00026511276,0.00022393563,0.00010325135,0.0007770302,0.0008058782,0.0007224954],"category_scores_gemma":[0.0067632417,0.00036112516,0.00083770533,0.0016565114,0.00053885096,0.00027516318,0.0005510368,0.0013577782,0.000028637844],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004193058,0.0005479825,0.000052231808,0.01668277,0.00020322275,0.0000020469963,0.000067500885,1.0212307e-8,0.000053217937,0.00011231514,0.9808135,0.0014232718],"study_design_scores_gemma":[0.0009343887,0.00018445574,0.0136921,0.015995443,0.000450797,0.000056493824,0.000074355106,0.0000043301775,0.00018339482,0.000010363369,0.968121,0.00029287784],"about_ca_topic_score_codex":0.000059598413,"about_ca_topic_score_gemma":0.0000114070735,"teacher_disagreement_score":0.10797018,"about_ca_system_score_codex":0.00011792945,"about_ca_system_score_gemma":0.0008100814,"threshold_uncertainty_score":0.99988407},"labels":[],"label_agreement":null},{"id":"W4205386814","doi":"10.1101/2022.01.09.475582","title":"Differential response of <i>Candida</i> species morphologies and isolates to fluconazole and boric acid","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Fluconazole; Corpus albicans; Microbiology; Candida albicans; Boric acid; Biofilm; Biology; Azole; Yeast; Drug resistance; Population; Antimicrobial; Chemistry; Bacteria; Antifungal; Medicine; Biochemistry","score_opus":0.014317951704842525,"score_gpt":0.23744819286895716,"score_spread":0.22313024116411465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205386814","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99434686,0.0021650605,0.00014150084,0.001899904,0.0002827508,0.000681159,0.00033871815,0.00013666702,0.000007399437],"genre_scores_gemma":[0.9971024,0.0006132648,0.0011069248,0.00085527723,0.000143343,0.00008307507,5.279967e-7,0.000057567304,0.000037657803],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997753,0.00014014624,0.00048271744,0.000870994,0.00035128635,0.0004018418],"domain_scores_gemma":[0.9981903,0.00017544902,0.00022048833,0.00092969986,0.00023977441,0.00024431304],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000499053,0.00041598338,0.0008433305,0.00026925013,0.00015355043,0.000071297014,0.00021824041,0.00031188666,0.00021970399],"category_scores_gemma":[0.00062900904,0.00039900088,0.00011846198,0.00030552814,0.00030631377,0.000067097004,0.0008884835,0.0007486792,0.0000046943446],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001704801,0.00009135936,0.1465966,0.00050984597,0.00010023487,0.00008930504,0.00003588377,9.99376e-7,0.85012025,0.00006869789,0.00068045175,0.0000015490548],"study_design_scores_gemma":[0.000503317,0.0002825202,0.7038816,0.00015571118,0.00013511715,6.5424345e-8,0.000035106143,0.000013401161,0.29257956,0.0000017691417,0.0021208066,0.00029103234],"about_ca_topic_score_codex":0.000037571303,"about_ca_topic_score_gemma":0.000002303972,"teacher_disagreement_score":0.5575407,"about_ca_system_score_codex":0.00015255393,"about_ca_system_score_gemma":0.00036006127,"threshold_uncertainty_score":0.99984616},"labels":[],"label_agreement":null},{"id":"W4205527260","doi":"10.1128/aem.01535-21","title":"Spt20, a Structural Subunit of the SAGA Complex, Regulates Aspergillus fumigatus Biofilm Formation, Asexual Development, and Virulence","year":2021,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Fonds de recherche du Québec; Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China; Government of Canada","keywords":"Conidiation; Biology; Biofilm; Aspergillus fumigatus; Virulence; Protein subunit; Fungal protein; Cell biology; Microbiology; Gene; Saccharomyces cerevisiae; Genetics; Bacteria","score_opus":0.014061567917146498,"score_gpt":0.2068427377939055,"score_spread":0.192781169876759,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205527260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998694,0.0006312907,0.0000119713495,0.00010725931,0.000029583818,0.00014944228,0.00006414161,0.0000067879,0.00030553713],"genre_scores_gemma":[0.99841386,0.00011552908,0.00060320616,0.00032825334,0.000013375068,0.0000032280875,0.00026681062,0.0000062945987,0.00024943016],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99932873,0.000025408182,0.00021665676,0.00022051869,0.00004334005,0.00016536837],"domain_scores_gemma":[0.9996851,0.000028506742,0.00006622009,0.00016509877,0.0000057755788,0.000049277605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000057303452,0.00011959531,0.0002131589,0.00001941796,0.00013691104,0.0000052501396,0.00004725236,0.0000857837,0.00013683912],"category_scores_gemma":[0.000006210736,0.000083271545,0.000026033667,0.00005135093,0.0005487646,0.00002896786,0.00013613487,0.00009833281,0.000005982708],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006596184,0.000026755079,0.040681127,0.000057869405,0.000028161985,0.0000026702003,0.00036205957,5.076061e-7,0.9543481,0.00024108058,0.000048516587,0.004137177],"study_design_scores_gemma":[0.00064897316,0.000037598136,0.5765688,0.000017589924,0.000026989856,0.0002000687,0.0011750011,0.000012679769,0.41770145,0.000105992105,0.0034055593,0.00009929059],"about_ca_topic_score_codex":0.000004902822,"about_ca_topic_score_gemma":0.00002044492,"teacher_disagreement_score":0.53664666,"about_ca_system_score_codex":0.000035043435,"about_ca_system_score_gemma":0.000025817832,"threshold_uncertainty_score":0.3395715},"labels":[],"label_agreement":null},{"id":"W4205598715","doi":"10.21203/rs.3.rs-1214746/v1","title":"Cost-effectiveness Analysis of Caspofungin and Fluconazole for Primary Treatment of Invasive Candidiasis and Candidemia in Ethiopia","year":2022,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Caspofungin; Fluconazole; Medicine; Cost effectiveness; Voriconazole; Antifungal","score_opus":0.12687682529783642,"score_gpt":0.4560051485512316,"score_spread":0.32912832325339514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205598715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98662865,0.007281161,0.000037469286,0.000118413205,0.000024920055,0.0042673335,0.0014751191,0.0000066388366,0.00016029936],"genre_scores_gemma":[0.99179655,0.005999166,0.00012347562,0.000009078177,0.000018329865,0.0011682424,0.0007283952,0.00002020501,0.00013657506],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99721265,0.0006688331,0.00046486084,0.0006594454,0.0006200959,0.00037411854],"domain_scores_gemma":[0.9952005,0.0034572473,0.00014511237,0.00054838957,0.0004757921,0.00017293186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00215681,0.00021842214,0.0014450861,0.0011061926,0.000088577915,0.000014033545,0.00009474969,0.0002572668,0.000090993424],"category_scores_gemma":[0.00089972577,0.00018952112,0.00027590946,0.00083477685,0.0003203324,0.000036446447,0.0003133879,0.0005159132,1.2789798e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003121097,0.0003897418,0.97359,0.009531772,0.0012982272,0.000057611483,0.0025112962,0.00016215655,0.0029276188,0.0000844253,0.000017004451,0.0063090203],"study_design_scores_gemma":[0.0019852845,0.0012028426,0.9882086,0.0006292161,0.00078383053,0.0000013554686,0.0026343605,0.00027306474,0.0038519183,0.00016788863,0.00013293298,0.00012870671],"about_ca_topic_score_codex":0.01378267,"about_ca_topic_score_gemma":0.0131758675,"teacher_disagreement_score":0.01461857,"about_ca_system_score_codex":0.0012326088,"about_ca_system_score_gemma":0.0015658101,"threshold_uncertainty_score":0.9927846},"labels":[],"label_agreement":null},{"id":"W4206909324","doi":"10.1093/ecco-jcc/jjab232.036","title":"OP37 Bacterial suppression of intestinal fungi via activation of human gut Vδ2+ T-cells","year":2022,"lang":"en","type":"article","venue":"Journal of Crohn s and Colitis","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"Medical Research Council","keywords":"Candida albicans; Biology; Microbiology; Corpus albicans; Ex vivo; In vivo","score_opus":0.016757087072277153,"score_gpt":0.28083835589950384,"score_spread":0.2640812688272267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206909324","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99878216,0.000121706915,0.00016215896,0.00010349139,0.00016275783,0.000099930956,0.00001722025,0.0000022322672,0.00054832356],"genre_scores_gemma":[0.99918824,0.00004331123,0.00023896193,0.00003675556,0.00015435054,0.0000013713196,0.0000060534576,0.000006798815,0.00032417628],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99887305,0.00007221608,0.0005082413,0.00008601867,0.0003556005,0.00010489057],"domain_scores_gemma":[0.99901885,0.00006714487,0.0004665964,0.00010795946,0.00025978946,0.00007967996],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00035836705,0.00007191309,0.0003428196,0.0000869027,0.00008539493,0.0000073446085,0.000068629786,0.00003425604,0.0009486894],"category_scores_gemma":[0.000061196,0.000059529262,0.00011007099,0.000085827625,0.00008233174,0.00009667192,0.000052154497,0.0002046577,2.4209783e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0069087697,0.00028116052,0.012827114,0.00019121355,0.00003933957,0.000049109152,0.0003631088,0.0000028551694,0.97282785,0.00012494119,0.0015518832,0.004832626],"study_design_scores_gemma":[0.0013616935,0.0020448752,0.8108218,0.00026062035,0.00007144466,0.0001340327,0.000593271,0.000018546676,0.18275821,0.00037675785,0.0014993197,0.000059443817],"about_ca_topic_score_codex":0.000052367468,"about_ca_topic_score_gemma":0.0000047802664,"teacher_disagreement_score":0.7979947,"about_ca_system_score_codex":0.000049767008,"about_ca_system_score_gemma":0.000116865434,"threshold_uncertainty_score":0.9999646},"labels":[],"label_agreement":null},{"id":"W4209159","doi":"10.1155/2014/983724","title":"Micafungin Compared with Caspofungin for the Treatment of Febrile Episodes in Neutropenic Patients with Hematological Malignancies: A Retrospective Study","year":2014,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"Astellas Pharma","keywords":"Micafungin; Caspofungin; Echinocandin; Neutropenia; Febrile neutropenia; Internal medicine; Medicine; Retrospective cohort study; Voriconazole; Antifungal; Chemotherapy; Dermatology; Fluconazole","score_opus":0.006948396947699203,"score_gpt":0.23269950823276211,"score_spread":0.22575111128506292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4209159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975485,0.0011865203,0.00017555745,0.00026335276,0.00006020029,0.0006821068,0.00006541674,0.0000029312016,0.000015400032],"genre_scores_gemma":[0.99967813,0.00007751486,0.000022531502,0.00013347823,0.00004166577,0.00001782691,0.000010323313,0.000008022852,0.000010526817],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99909496,0.00009344841,0.0003148255,0.00016756344,0.000079335034,0.00024989282],"domain_scores_gemma":[0.99878114,0.00026925164,0.00015122487,0.00012797471,0.00024178658,0.00042863353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001656861,0.00013304198,0.00060518214,0.00010081863,0.000079936966,0.0000074539616,0.00006780973,0.00006812271,0.000058653863],"category_scores_gemma":[0.0002897109,0.0000628496,0.00008361359,0.00011649799,0.0004447609,0.000022162265,0.000004694865,0.00010839352,3.3431988e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010893868,0.0007399702,0.9966595,0.000035483095,0.00017819375,0.00007299892,0.00031202962,0.000004428109,0.00005387907,0.00006340857,0.00009162108,0.0006990837],"study_design_scores_gemma":[0.006813527,0.012586697,0.9787309,0.00014860247,0.00025416573,0.00018606106,0.00056582695,0.00001515445,0.000016916021,0.000030800344,0.0005779672,0.000073335534],"about_ca_topic_score_codex":0.0020983228,"about_ca_topic_score_gemma":0.060226392,"teacher_disagreement_score":0.05812807,"about_ca_system_score_codex":0.00018562356,"about_ca_system_score_gemma":0.00063788693,"threshold_uncertainty_score":0.95692205},"labels":[],"label_agreement":null},{"id":"W4210441305","doi":"10.1016/j.gr.2021.12.016","title":"Black fungus outbreak in India – A direct consequence of COVID-19 surge: A myth or reality","year":2022,"lang":"en","type":"article","venue":"Gondwana Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Outbreak; Mucormycosis; Coronavirus disease 2019 (COVID-19); Medicine; Disease; Intensive care medicine; Surgery; Infectious disease (medical specialty); Pathology","score_opus":0.18551799754489542,"score_gpt":0.4556401901464992,"score_spread":0.27012219260160375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210441305","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9686051,0.00066270545,0.000017401302,0.0045264247,0.00005468538,0.0011994533,0.00032958432,0.000048147,0.024556486],"genre_scores_gemma":[0.9903716,0.00020043021,0.000053348453,0.0006398643,0.000031731073,0.00011304178,0.00005396609,0.00002083886,0.008515177],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9949257,0.0014924773,0.00055972906,0.0006232693,0.0016519381,0.0007469289],"domain_scores_gemma":[0.9966853,0.001541308,0.000097315344,0.000910847,0.00030378363,0.00046140654],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.008294716,0.00015284511,0.0005944299,0.00052205496,0.00025702966,0.000017399589,0.00035217154,0.000094846946,0.0029923716],"category_scores_gemma":[0.0070055597,0.0001287418,0.0001312537,0.0021905212,0.0010112824,0.000064539236,0.00040329856,0.0010825963,0.000034992252],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.02386267,0.0020761136,0.855065,0.0030318373,0.00015175066,0.013077002,0.0061761034,0.00006167166,0.019543653,0.0023800416,0.07030448,0.0042697038],"study_design_scores_gemma":[0.005039958,0.0022321285,0.878814,0.00018245021,0.000045394932,0.00023691097,0.017417857,0.00029821624,0.002760052,0.0017342577,0.09079135,0.00044747125],"about_ca_topic_score_codex":0.007855694,"about_ca_topic_score_gemma":0.0024513796,"teacher_disagreement_score":0.023748988,"about_ca_system_score_codex":0.0011700658,"about_ca_system_score_gemma":0.0052633267,"threshold_uncertainty_score":0.9987511},"labels":[],"label_agreement":null},{"id":"W4210832429","doi":"10.1177/03009858221075589","title":"<i>Talaromyces</i> spp. infections in dogs from the Southern United States","year":2022,"lang":"en","type":"article","venue":"Veterinary Pathology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institutes of Health","keywords":"Meningoencephalitis; Polymerase chain reaction; Biology; Pathology; Medicine; Zoology; Gene; Genetics","score_opus":0.02790685312318371,"score_gpt":0.28079975545627767,"score_spread":0.25289290233309397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210832429","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99682283,0.00029582318,0.00004468325,0.0014870245,0.00019597397,0.00022180988,0.00027563222,0.00005526022,0.0006009527],"genre_scores_gemma":[0.9963975,0.00006877042,0.00007888577,0.002248853,0.00005333023,0.00007408447,0.00040794662,0.000015514446,0.00065509044],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987924,0.000379502,0.00020675373,0.0002687806,0.00013134984,0.00022122497],"domain_scores_gemma":[0.9992731,0.00022088522,0.00004891874,0.00039045166,0.000024307912,0.00004233286],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00032296337,0.00010783736,0.00019753099,0.000096793876,0.0002084416,0.0000071019276,0.00012000292,0.0000509361,0.0011518057],"category_scores_gemma":[0.00006356635,0.000081746366,0.00006991057,0.00041836983,0.00014503815,0.000028679999,0.00018562628,0.0004311733,0.0000857898],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007931721,0.00056376687,0.95317507,0.000018930852,0.000029264726,0.0027822321,0.003954589,0.00011645121,0.035668075,0.000055677705,0.0018311051,0.0010116387],"study_design_scores_gemma":[0.0020641708,0.0035524035,0.7684046,0.000028420356,0.000060934217,0.0014437744,0.009358443,0.00034511392,0.000058759237,0.0013502568,0.21309009,0.00024300689],"about_ca_topic_score_codex":0.0012610732,"about_ca_topic_score_gemma":0.00025196178,"teacher_disagreement_score":0.21125898,"about_ca_system_score_codex":0.00006265918,"about_ca_system_score_gemma":0.00004698989,"threshold_uncertainty_score":0.9997613},"labels":[],"label_agreement":null},{"id":"W4210839370","doi":"10.1101/2022.02.07.479457","title":"Deep tissue infection by an invasive human fungal pathogen requires novel lipid-based suppression of the IL-17 response","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"University of California, San Francisco; Canadian Institute for Advanced Research; Genome Canada; Damon Runyon Cancer Research Foundation","keywords":"Candida albicans; Corpus albicans; Biology; Pathogenesis; Immunosuppression; Microbiology; Pathogen; Immunology","score_opus":0.021008967022073638,"score_gpt":0.2720659482860076,"score_spread":0.25105698126393394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210839370","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99484277,0.00035805834,0.0008907151,0.00024908266,0.00079076807,0.0014704342,0.00118056,0.00020405538,0.000013542514],"genre_scores_gemma":[0.9982941,0.00005466438,0.0006394987,0.00031646035,0.00029536616,0.00021499135,0.0000083023515,0.00012641004,0.00005018311],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9957694,0.00079840445,0.0008261953,0.0011729461,0.000930059,0.00050302036],"domain_scores_gemma":[0.99549276,0.00024013245,0.0007603487,0.0025782387,0.00062043034,0.00030810808],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017255812,0.00056619506,0.0008075334,0.0002426234,0.0004978834,0.00007277051,0.00057898165,0.0006075497,0.00036088607],"category_scores_gemma":[0.001272333,0.0004862394,0.00031010585,0.00057323923,0.0003418844,0.00016661543,0.0006113354,0.0012695031,0.0000054990064],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001293249,0.0006846474,0.13376768,0.00062915095,0.00007534027,0.000029070417,0.0000332537,0.00012461713,0.86255145,0.000037059937,0.0007726433,0.000001827631],"study_design_scores_gemma":[0.0007999892,0.00039667104,0.48725057,0.0004609128,0.00017939594,2.9649428e-8,0.000009357206,0.000113362716,0.50645554,9.970203e-7,0.0039957655,0.00033738825],"about_ca_topic_score_codex":0.00029039156,"about_ca_topic_score_gemma":0.00008217157,"teacher_disagreement_score":0.3560959,"about_ca_system_score_codex":0.00060359907,"about_ca_system_score_gemma":0.0015821293,"threshold_uncertainty_score":0.9997589},"labels":[],"label_agreement":null},{"id":"W4211139165","doi":"10.1016/j.cmi.2022.01.027","title":"Defining COVID-19–associated pulmonary aspergillosis: systematic review and meta-analysis","year":2022,"lang":"en","type":"review","venue":"Clinical Microbiology and Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Northern Alberta Clinical Trials and Research Centre","keywords":"Coronavirus disease 2019 (COVID-19); Meta-analysis; Pulmonary aspergillosis; 2019-20 coronavirus outbreak; Aspergillosis; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Medicine; Systematic review; MEDLINE; Betacoronavirus; Virology; Intensive care medicine; Pathology; Immunology; Biology; Infectious disease (medical specialty); Outbreak; Disease","score_opus":0.17478573444719775,"score_gpt":0.4456269221764188,"score_spread":0.27084118772922106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211139165","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000032243828,0.9975044,0.000016818134,0.00022518862,0.00009520612,0.0017142039,0.0001803435,0.00006359733,0.00016801334],"genre_scores_gemma":[0.00039920295,0.9931459,0.000011824507,0.004266165,0.000019775676,0.00031214935,0.0011929909,0.000021470933,0.0006305603],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9936942,0.0031054155,0.0020269817,0.00087430445,0.000057976093,0.00024112793],"domain_scores_gemma":[0.9953822,0.002750307,0.0010631625,0.00049983035,0.00006423244,0.00024025732],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.004528078,0.00041635582,0.010097028,0.00021072589,0.00029542836,0.000014151106,0.00008057964,0.0007525394,0.0013672826],"category_scores_gemma":[0.008062111,0.00026941852,0.003404374,0.0006880178,0.00033271703,0.000043473796,0.00014884418,0.0010522299,0.000030823765],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018421997,0.0002500914,0.0020817928,0.8347109,0.15962204,0.000026024292,0.0000061844653,5.41055e-8,3.295932e-7,0.000057288886,0.00056229223,0.0026646054],"study_design_scores_gemma":[0.000110056055,0.0002578352,0.00012930912,0.0056031365,0.8064736,0.00025678234,0.0000052755468,7.0765924e-7,1.4449886e-8,0.000013059467,0.18693964,0.00021057516],"about_ca_topic_score_codex":0.000034889566,"about_ca_topic_score_gemma":0.000057210756,"teacher_disagreement_score":0.82910776,"about_ca_system_score_codex":0.0001620034,"about_ca_system_score_gemma":0.0002515726,"threshold_uncertainty_score":0.9999758},"labels":[],"label_agreement":null},{"id":"W4213074258","doi":"10.1016/j.isci.2022.103953","title":"The role of Candida albicans stress response pathways in antifungal tolerance and resistance","year":2022,"lang":"en","type":"review","venue":"iScience","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canada Research Chairs; Canadian Institute for Advanced Research","keywords":"Candida albicans; Biology; Corpus albicans; Signal transduction; Drug resistance; Microbiology; Calcineurin; Antifungal drug; Transcription factor; Cell biology; Biochemistry; Medicine","score_opus":0.03219437960194552,"score_gpt":0.3120229841303983,"score_spread":0.27982860452845276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213074258","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.020468293,0.9758808,0.0000018938318,0.00005150723,0.00010151593,0.00060009444,0.0001703553,0.000012910907,0.0027126125],"genre_scores_gemma":[0.026891533,0.97143775,0.000066662156,0.000022456461,0.00002491359,0.000066107736,0.0000066740167,0.000017012257,0.0014669157],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99743056,0.00031237464,0.0006220881,0.0006119569,0.0006257608,0.00039728242],"domain_scores_gemma":[0.9975459,0.0012222085,0.0002965658,0.0007733368,0.000050485054,0.000111487774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019693745,0.00024639207,0.0010084995,0.00011890745,0.00029471517,0.00003361424,0.0004639721,0.00010104816,0.000066695764],"category_scores_gemma":[0.00094793184,0.00016030626,0.00017015234,0.0008630719,0.00077870267,0.00007714982,0.00016682243,0.0005247893,0.000002289763],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011648547,0.00015046123,0.008778325,0.005803619,0.000024074961,0.00015645486,0.0007392683,6.8437157e-7,0.00028081588,0.001579937,0.00014891214,0.9811726],"study_design_scores_gemma":[0.0001710695,0.00010165189,0.008848078,0.004798977,0.00006202927,0.000016081844,0.00059071503,0.000009162837,0.000025101917,0.0001241013,0.9850783,0.0001747838],"about_ca_topic_score_codex":0.00009552735,"about_ca_topic_score_gemma":0.0012130653,"teacher_disagreement_score":0.9849293,"about_ca_system_score_codex":0.00018619091,"about_ca_system_score_gemma":0.0012283447,"threshold_uncertainty_score":0.65370995},"labels":[],"label_agreement":null},{"id":"W4213149257","doi":"10.1093/ofid/ofac021","title":"Isolated Pulmonary Emergomycosis in an Immunocompetent Patient in Alberta, Canada","year":2022,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"Government of Canada; University of Calgary","keywords":"Medicine; Histoplasmosis; Asymptomatic; Pulmonary infection; Intensive care medicine; Pathology; Internal medicine","score_opus":0.007166788329385492,"score_gpt":0.2478352840231308,"score_spread":0.2406684956937453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213149257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921712,0.00038233676,0.0000012609946,0.000667785,0.00016780362,0.0010525286,0.000081872335,0.00001840356,0.00545681],"genre_scores_gemma":[0.99748975,0.000026484437,0.0000032566065,0.0014267066,0.000007789541,0.00038310263,0.00023625835,0.000022922657,0.0004037288],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983521,0.00016855393,0.00038505052,0.00039958805,0.000299702,0.0003949867],"domain_scores_gemma":[0.99921036,0.00006275056,0.00007956985,0.00041880345,0.000045413773,0.00018310436],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009657203,0.00016707198,0.00034108135,0.00011492284,0.00022984279,0.0000332594,0.00021844488,0.000028571907,0.0014352665],"category_scores_gemma":[0.00006410489,0.00016730414,0.00007286134,0.0004650977,0.000028492806,0.00021658024,0.0003672783,0.00024779554,0.0000046936116],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000867015,0.0017137955,0.9894637,0.000025041336,0.000023157869,0.00033460796,0.00009554172,0.00027353383,0.00011603025,0.000091785136,0.0010396645,0.005956153],"study_design_scores_gemma":[0.0010979819,0.00076970574,0.98978305,0.000045343,0.000028960185,0.000027289703,0.0016107634,0.0010981933,0.00001945644,0.0002214601,0.005075805,0.00022201047],"about_ca_topic_score_codex":0.8812816,"about_ca_topic_score_gemma":0.96169645,"teacher_disagreement_score":0.080414824,"about_ca_system_score_codex":0.0010254958,"about_ca_system_score_gemma":0.0009924305,"threshold_uncertainty_score":0.99947757},"labels":[],"label_agreement":null},{"id":"W4213170805","doi":"10.1016/j.mmcr.2022.02.004","title":"Trichosporon mucoides prosthetic valve endocarditis managed with antifungal suppression therapy","year":2022,"lang":"en","type":"article","venue":"Medical Mycology Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Medicine; Voriconazole; Endocarditis; Antifungal; Terbinafine; Trichosporon; Caspofungin; Aortic valve; Internal medicine; Surgery; Cardiology; Dermatology; Itraconazole","score_opus":0.011630856245412461,"score_gpt":0.2714240959765919,"score_spread":0.25979323973117946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213170805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992224,0.0017543042,0.0001051596,0.0010340189,0.000616497,0.0011442425,0.000011729194,0.0001552267,0.0029548218],"genre_scores_gemma":[0.9966208,0.00024250995,0.0001663093,0.0012204013,0.00015586319,0.00029139945,0.00009041609,0.000041550844,0.0011708034],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99623066,0.0004298523,0.0006498707,0.0007853238,0.0013539966,0.0005503154],"domain_scores_gemma":[0.9981321,0.00027970545,0.00026732104,0.0007449,0.00011760664,0.0004583684],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016792648,0.000262648,0.0006994992,0.00014976005,0.0005178071,0.000012691826,0.000081766404,0.00019243783,0.0076319417],"category_scores_gemma":[0.0006799221,0.00018676036,0.00027195716,0.00038562177,0.00041537784,0.00006565414,0.00014897712,0.000968681,0.000008851541],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010132804,0.00070776837,0.21682593,0.00007196124,0.00018428292,0.75659114,0.00021573114,0.0000035569942,0.0009852228,0.000029147786,0.0077222097,0.015649756],"study_design_scores_gemma":[0.0032348165,0.0031985338,0.24997646,0.000090665264,0.0002401399,0.68973744,0.00089037715,0.000060998882,0.0014582694,0.00020289542,0.05057317,0.00033624595],"about_ca_topic_score_codex":0.00016142435,"about_ca_topic_score_gemma":0.000045005156,"teacher_disagreement_score":0.06685372,"about_ca_system_score_codex":0.00019236545,"about_ca_system_score_gemma":0.00065331353,"threshold_uncertainty_score":0.9932752},"labels":[],"label_agreement":null},{"id":"W4213262317","doi":"10.3410/f.739794240.793584987","title":"Faculty Opinions recommendation of Lineage-specific selection and the evolution of virulence in the Candida clade.","year":2021,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Virulence; Biology; Candida dubliniensis; Gene; Candida albicans; Genetics; Genome; Corpus albicans; Lineage (genetic); Phenotype; Clade; Gene expression; Phylogenetics","score_opus":0.0273308440408182,"score_gpt":0.345053700038087,"score_spread":0.3177228559972688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213262317","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000025692216,0.006232968,0.000079914644,0.12008393,0.000301806,0.0015443393,0.8716796,0.000009430673,0.00004232089],"genre_scores_gemma":[0.0012471288,0.0028725702,0.0001785412,0.001708647,0.00020371497,0.00013997711,0.99338007,0.000011885291,0.00025748077],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9953343,0.0010316123,0.0015579165,0.00052861765,0.0013072408,0.0002403025],"domain_scores_gemma":[0.99308854,0.0004183577,0.0011985174,0.001189384,0.003995408,0.00010981492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027766298,0.00033549668,0.00096845377,0.00022673087,0.00019632366,0.00006128446,0.0007280767,0.00049919134,0.00015207379],"category_scores_gemma":[0.007175831,0.0001621529,0.0004614692,0.0025590092,0.0007188921,0.00018970805,0.0001938359,0.0012624965,0.0000043593714],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000113663096,0.0003303325,0.00013077496,0.00563494,0.00007075896,2.6071825e-7,0.0002629651,9.856871e-8,0.000010409465,0.0007698383,0.99181616,0.00085980474],"study_design_scores_gemma":[0.0011842101,0.00011378759,0.025571963,0.0092106955,0.00019593052,0.000042137835,0.00032394732,0.000027425129,0.000022574402,0.000030270638,0.9631417,0.00013536063],"about_ca_topic_score_codex":0.00030629753,"about_ca_topic_score_gemma":0.0001266118,"teacher_disagreement_score":0.12170045,"about_ca_system_score_codex":0.0001968759,"about_ca_system_score_gemma":0.0007252174,"threshold_uncertainty_score":0.8590659},"labels":[],"label_agreement":null},{"id":"W4213296771","doi":"10.1128/aem.02061-21","title":"Citizen Science Surveillance of Triazole-Resistant <i>Aspergillus fumigatus</i> in United Kingdom Residential Garden Soils","year":2022,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Environment Research Council; Wellcome Trust; Sight Research UK; Medical Research Council; Canadian Institute for Advanced Research; Albaha University; UK Research and Innovation","keywords":"Aspergillus fumigatus; Citizen science; Soil water; Biology; Environmental health; Microbiology; Ecology; Medicine; Botany","score_opus":0.01014548527046834,"score_gpt":0.22451801401423147,"score_spread":0.2143725287437631,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213296771","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979124,0.00029441534,0.000005354184,0.00011389819,0.00007404153,0.00032340232,0.00019617491,0.000012752475,0.0010675722],"genre_scores_gemma":[0.99914646,0.0000883927,0.000060866165,0.00029150458,0.000021280794,0.000020573529,0.00021891338,0.000012502034,0.00013948564],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985961,0.00007312896,0.00036537804,0.00046418354,0.00014622942,0.00035498696],"domain_scores_gemma":[0.99947786,0.00006506388,0.000106600266,0.00026564227,0.0000058416376,0.00007896445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057547167,0.00014911687,0.00038445593,0.0001907731,0.00019879662,0.0000060352963,0.0001593725,0.00006499949,0.0002984359],"category_scores_gemma":[0.000017153347,0.00014159971,0.000052590505,0.00028994115,0.0011329182,0.000022720584,0.00031052702,0.00024784185,0.0000052901164],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012156757,0.00014209055,0.042755537,0.000030139927,0.000015441483,0.000019006275,0.00016283682,0.000021686858,0.9549938,0.0003669211,0.00008776285,0.00018914494],"study_design_scores_gemma":[0.008352512,0.0008856444,0.83044666,0.000042110052,0.000056675082,0.0001562349,0.004306102,0.000053469677,0.14410114,0.00030225565,0.010772242,0.00052497344],"about_ca_topic_score_codex":0.00014252028,"about_ca_topic_score_gemma":0.00005186068,"teacher_disagreement_score":0.8108926,"about_ca_system_score_codex":0.000201452,"about_ca_system_score_gemma":0.00007879392,"threshold_uncertainty_score":0.57742685},"labels":[],"label_agreement":null},{"id":"W4213374180","doi":"10.1097/id9.0000000000000047","title":"Fungal Translocation Marker in People Living with HIV Needing Treatment for Onychomycosis: A Protocol for the Prospective Pilot Study","year":2022,"lang":"en","type":"article","venue":"Infectious Diseases & Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Terbinafine; Discontinuation; Medicine; Human immunodeficiency virus (HIV); Microbiome; Regimen; Saliva; Internal medicine; Antifungal; Immunology; Biology; Bioinformatics; Dermatology","score_opus":0.029395425252289248,"score_gpt":0.320302789569642,"score_spread":0.29090736431735276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213374180","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80485916,0.00005374814,0.000888858,0.00009714792,0.000030019453,0.19372696,0.00009200434,0.00008886618,0.00016324951],"genre_scores_gemma":[0.5839111,0.0000019331708,0.000011443374,0.000034054217,0.000037495698,0.4158721,0.000010670783,0.000020396406,0.00010076441],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99862725,0.00022449071,0.0002812791,0.00032344076,0.00024938997,0.00029413195],"domain_scores_gemma":[0.998396,0.0008427779,0.00010506029,0.00041503043,0.00016710768,0.00007404236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052027754,0.0002132693,0.00032846976,0.000099005454,0.0009926581,0.000044269203,0.00010517647,0.000017628527,0.000102011254],"category_scores_gemma":[0.00025147342,0.00014444612,0.00013906165,0.00039737555,0.00005391685,0.000117923715,0.000037464102,0.00020778542,8.0017776e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011163128,0.012929434,0.96879,0.00018773283,0.00025676284,0.0000026014854,0.0036449668,0.00023940747,0.00006888268,0.000026393864,0.00005619865,0.002634474],"study_design_scores_gemma":[0.01003248,0.01753817,0.9572804,0.00010861835,0.00033011552,0.000008971142,0.013554481,0.00073456415,0.000017209974,0.00006705298,0.00017141677,0.0001565004],"about_ca_topic_score_codex":0.0011300705,"about_ca_topic_score_gemma":0.0037433945,"teacher_disagreement_score":0.22214516,"about_ca_system_score_codex":0.0009717691,"about_ca_system_score_gemma":0.0003919902,"threshold_uncertainty_score":0.7634824},"labels":[],"label_agreement":null},{"id":"W4213416807","doi":"10.3410/f.11547956.12596054","title":"Faculty Opinions recommendation of Epidemiology of invasive candidiasis: a persistent public health problem.","year":2011,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"","keywords":"Medicine; Epidemiology; Candida glabrata; Intensive care medicine; Population; Mortality rate; Invasive candidiasis; Public health; Aspergillosis; Amphotericin B; Candida albicans; Antifungal; Internal medicine; Environmental health; Immunology; Pathology; Biology; Dermatology; Fluconazole","score_opus":0.12411058523351372,"score_gpt":0.3985060518179632,"score_spread":0.2743954665844495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213416807","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000025597978,0.004741559,0.000029464578,0.24042623,0.0003444464,0.002116547,0.7522374,0.000020844991,0.00008096973],"genre_scores_gemma":[0.000111390065,0.0026494234,0.0012789002,0.00882987,0.00015449859,0.0002539026,0.986126,0.000025972779,0.0005700271],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99260646,0.001442399,0.0032872767,0.00087509933,0.0011844368,0.0006043446],"domain_scores_gemma":[0.9838123,0.00047092422,0.003988388,0.002070937,0.008964514,0.00069297466],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.005122159,0.0005600543,0.0024139767,0.0004835331,0.0001947628,0.000020639714,0.0011407934,0.000852715,0.00067584426],"category_scores_gemma":[0.029948387,0.00034714738,0.0014507775,0.0018560598,0.0008859422,0.0002804119,0.00040167384,0.0012430608,0.000023723136],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005292808,0.0009428836,0.00043288883,0.033011205,0.00042763836,2.4111597e-7,0.00037754755,1.600239e-8,7.476329e-7,0.0005046318,0.96240836,0.0018409322],"study_design_scores_gemma":[0.0008123703,0.0006990115,0.012718447,0.019257108,0.00031012783,0.000040604395,0.00020702515,0.0000016508426,0.000005582673,0.00004039883,0.96566874,0.00023891308],"about_ca_topic_score_codex":0.000482918,"about_ca_topic_score_gemma":0.000107377775,"teacher_disagreement_score":0.23388863,"about_ca_system_score_codex":0.0003113111,"about_ca_system_score_gemma":0.0034720676,"threshold_uncertainty_score":0.9998981},"labels":[],"label_agreement":null},{"id":"W4214553147","doi":"10.1111/mec.16411","title":"Bacterial‐fungal interactions and their impact on microbial pathogenesis","year":2022,"lang":"en","type":"review","venue":"Molecular Ecology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; W. Garfield Weston Foundation","keywords":"Biology; Candida albicans; Human microbiome; Cryptococcus neoformans; Microbiology; Commensalism; Virulence; Disease; Human health; Microbiome; Bacteria; Genetics; Gene","score_opus":0.029595005682568246,"score_gpt":0.3360674262165241,"score_spread":0.30647242053395585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214553147","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06686176,0.9297739,0.000020344807,0.00007604057,0.00075122307,0.0010892358,0.0003795104,0.000049577735,0.0009983953],"genre_scores_gemma":[0.010723893,0.98745215,0.000043853273,0.00031289435,0.00016293227,0.0001401923,0.00060332456,0.00007718477,0.0004835675],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99804837,0.00047410637,0.00043312256,0.0006026252,0.00009333554,0.00034842876],"domain_scores_gemma":[0.99877745,0.00031837588,0.00018946578,0.0005329942,0.000031583713,0.00015010187],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023696014,0.00045125996,0.0017333414,0.00021457436,0.0001366356,0.00002189928,0.00013029002,0.00027566944,0.0037783927],"category_scores_gemma":[0.00019007479,0.00030537526,0.00085930194,0.00017590151,0.00009894352,0.000022349615,0.000147986,0.00061782374,0.00007492724],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004433014,0.0005766361,0.0006540747,0.004743669,0.0011882471,0.0013139168,0.000075902986,6.8104197e-7,0.003445527,0.00006638428,0.0018554431,0.98563623],"study_design_scores_gemma":[0.00031118598,0.00072539767,0.0021713837,0.0004935477,0.0007158851,0.00068797654,0.000020330366,0.0000012596383,0.000037932594,0.000012005893,0.994571,0.00025214427],"about_ca_topic_score_codex":0.000014428901,"about_ca_topic_score_gemma":0.00004957186,"teacher_disagreement_score":0.9927155,"about_ca_system_score_codex":0.00042789118,"about_ca_system_score_gemma":0.0005124862,"threshold_uncertainty_score":0.99993986},"labels":[],"label_agreement":null},{"id":"W4214678897","doi":"10.3410/f.740953728.793591607","title":"Faculty Opinions recommendation of A unique cell wall synthetic response evoked by glucosamine determines pathogenicity-associated fungal cellular differentiation.","year":2022,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Pathogenicity; Glucosamine; Biology; Communication; Psychology; Microbiology; Biochemistry","score_opus":0.019598795261943972,"score_gpt":0.3122037322351544,"score_spread":0.29260493697321044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214678897","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00027968944,0.001963565,0.000039624858,0.0725925,0.0005173663,0.0022167494,0.9223096,0.000060017584,0.000020919577],"genre_scores_gemma":[0.0010104844,0.00056428503,0.00011718136,0.002730916,0.0000912496,0.00034569475,0.9912507,0.000051467912,0.0038380034],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9919655,0.002069047,0.002282441,0.001002539,0.0021721518,0.00050835975],"domain_scores_gemma":[0.98957455,0.00057731615,0.00226449,0.0020280925,0.0051288423,0.00042673392],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0030536517,0.00072524324,0.0016128141,0.00042888636,0.0003921529,0.00008521776,0.0012665369,0.0008814416,0.0038463383],"category_scores_gemma":[0.015095461,0.0005050293,0.0011272788,0.0021744445,0.00037978383,0.00022716016,0.0005236177,0.0016161908,0.00001743461],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003516717,0.0017622916,0.00009817585,0.0075351926,0.00020397782,0.0000022440647,0.000117304684,4.5141178e-8,0.0004478829,0.00001539077,0.98917145,0.00029438443],"study_design_scores_gemma":[0.0015194437,0.00050271454,0.0071720886,0.005550824,0.0006778456,0.000023652354,0.00005025032,0.000026192427,0.00045047543,0.000010304181,0.983591,0.00042521214],"about_ca_topic_score_codex":0.00007681072,"about_ca_topic_score_gemma":0.000015258611,"teacher_disagreement_score":0.069861576,"about_ca_system_score_codex":0.00045745767,"about_ca_system_score_gemma":0.0009789298,"threshold_uncertainty_score":0.9997401},"labels":[],"label_agreement":null},{"id":"W4220707605","doi":"10.3389/fcimb.2022.881272","title":"Editorial: Antifungal Pipeline: Build It Strong; Build It Better!","year":2022,"lang":"en","type":"editorial","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; U.S. Department of Veterans Affairs","keywords":"Antifungal; Pipeline (software); Pathogenesis; Microbiology; Biology; Immunology; Computer science; Programming language","score_opus":0.00683760331072678,"score_gpt":0.25553089657165107,"score_spread":0.2486932932609243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220707605","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008193237,0.0025221435,0.0033572353,0.00040552422,0.98320925,0.00072368595,0.00056291115,0.00008840418,0.0009376128],"genre_scores_gemma":[0.0044741975,0.0040715677,0.0005637705,0.0003339988,0.97818935,0.000063709915,0.005556313,0.00010611905,0.006640946],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9960466,0.0004546558,0.0010073547,0.0013414758,0.0003736484,0.00077624334],"domain_scores_gemma":[0.9982005,0.00025722713,0.00037879052,0.00068525755,0.0002924368,0.00018579474],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0012493618,0.000658729,0.0014849836,0.0005734244,0.00029302694,0.00005718201,0.00024038134,0.0022360284,0.00087478943],"category_scores_gemma":[0.00076788786,0.0006599722,0.00039090402,0.00037640863,0.00044335565,0.00013808093,0.00026046095,0.0033383402,0.000029153533],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072710455,0.00027019277,0.047012772,0.00038052333,0.00015745309,0.000052516352,0.00007054684,0.0000044151,0.014304698,0.0000033757078,0.9364339,0.0005824882],"study_design_scores_gemma":[0.0025835806,0.0006280975,0.00017586561,0.00014923724,0.00027744233,0.000021484724,0.00015441628,0.000028057046,0.0007984511,0.000045620327,0.99458444,0.00055331795],"about_ca_topic_score_codex":0.0004939506,"about_ca_topic_score_gemma":0.0001803842,"teacher_disagreement_score":0.058150515,"about_ca_system_score_codex":0.0006482327,"about_ca_system_score_gemma":0.0005884498,"threshold_uncertainty_score":0.99958515},"labels":[],"label_agreement":null},{"id":"W4220762641","doi":"10.1128/mbio.02933-21","title":"An Alanine Aminotransferase Is Required for Biofilm-Specific Resistance of Aspergillus fumigatus to Echinocandin Treatment","year":2022,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Institute of Infection and Immunity; McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Cystic Fibrosis Foundation","keywords":"Aspergillus fumigatus; Echinocandin; Microbiology; Aspergillosis; Aspergillus; Fungus; Biofilm; Antifungal; Fungal protein; Biology; Medicine; Immunology; Bacteria; Biochemistry; Fluconazole; Yeast","score_opus":0.037003771711263754,"score_gpt":0.3063812181370332,"score_spread":0.26937744642576944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220762641","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99356717,0.0007972094,0.000815775,0.0014778648,0.0001572773,0.0010934459,0.00097133376,0.000055187596,0.001064758],"genre_scores_gemma":[0.98976815,0.00008724441,0.002170567,0.0005228688,0.000089547044,0.00013899134,0.00019745296,0.000029671843,0.0069955364],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99843776,0.000055172317,0.00036539198,0.0004976616,0.00031894352,0.0003250395],"domain_scores_gemma":[0.99889183,0.00005263807,0.00005424964,0.0006943097,0.00008925968,0.00021773149],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002327419,0.00018826938,0.00043780354,0.00010068876,0.00020939515,0.000010387456,0.00013950949,0.0000539333,0.0006909835],"category_scores_gemma":[0.000022224784,0.00016538156,0.00018895791,0.00029104258,0.000068774425,0.000047956237,0.00002042208,0.00009029447,0.000010298841],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014838839,0.0020929163,0.0363138,0.0002518475,0.00017822422,0.00011622631,0.004335563,0.0000141123655,0.90835804,0.0025832579,0.019018056,0.011899094],"study_design_scores_gemma":[0.008047621,0.012191638,0.10892884,0.00010597213,0.00023114569,0.000015160004,0.0022157126,0.00009650297,0.50149155,0.00050666014,0.36557537,0.00059380487],"about_ca_topic_score_codex":0.00010828203,"about_ca_topic_score_gemma":0.00030647474,"teacher_disagreement_score":0.4068665,"about_ca_system_score_codex":0.00038418372,"about_ca_system_score_gemma":0.00012181502,"threshold_uncertainty_score":0.75657845},"labels":[],"label_agreement":null},{"id":"W4220770730","doi":"10.32677/ijcr.v8i2.3272","title":"case report of osteoarticular mucormycosis in post COVID - 19 Patient","year":2022,"lang":"en","type":"article","venue":"Indian Journal of Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Society of Microbiologists","funders":"","keywords":"Mucormycosis; Medicine; Coronavirus disease 2019 (COVID-19); Rare disease; Surgery; Dermatology; Disease; Pathology; Infectious disease (medical specialty)","score_opus":0.01603276611668614,"score_gpt":0.2820610741595115,"score_spread":0.26602830804282535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220770730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979062,0.0007511727,0.00001671454,0.000499388,0.00029926928,0.00028864,0.000018269451,0.0000057774782,0.00021458139],"genre_scores_gemma":[0.999279,0.000008592338,0.00020824662,0.00037309987,0.00004611288,0.0000068079694,0.000009212589,0.000015007233,0.000053907603],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99685735,0.00016046214,0.0018311297,0.0002158537,0.00071076496,0.00022442442],"domain_scores_gemma":[0.99702334,0.00009243665,0.0015849712,0.0004729292,0.00036441075,0.0004618946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020319594,0.00012597148,0.00051103666,0.00034991198,0.00012763917,0.000008655112,0.000031860047,0.00005382706,0.0005111152],"category_scores_gemma":[0.0017986055,0.00011093866,0.00029026935,0.00035913364,0.00008307547,0.000106015,0.000056915836,0.0004626132,5.8726954e-7],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000352139,0.00032602416,0.1333431,0.00009630751,0.00006533958,0.860308,0.0023828691,0.00007529377,0.001146842,0.0000016946386,0.00041891748,0.0014834946],"study_design_scores_gemma":[0.00059569307,0.0012245447,0.004249195,0.000058245023,0.00012462698,0.9820725,0.007447223,0.000002915093,0.0015943659,0.0000512624,0.0024841886,0.00009524127],"about_ca_topic_score_codex":0.000540412,"about_ca_topic_score_gemma":0.00033566085,"teacher_disagreement_score":0.1290939,"about_ca_system_score_codex":0.00041471192,"about_ca_system_score_gemma":0.0016274119,"threshold_uncertainty_score":0.5596353},"labels":[],"label_agreement":null},{"id":"W4220798540","doi":"10.3138/jammi-2021-0004","title":"Molecular identification of <i>Aspergillus fumigatus</i> complex from lung transplant recipients using multilocus sequencing analysis (MLSA)","year":2022,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Sinai Health System; Public Health Ontario; University of Toronto; University Health Network","funders":"","keywords":"Aspergillus fumigatus; Biology; Microbiology; Aspergillus; Multilocus sequence typing; Bronchoalveolar lavage; Sputum; Genotype; Gene; Lung; Genetics; Medicine; Tuberculosis; Pathology","score_opus":0.008444141955689429,"score_gpt":0.24598390921855384,"score_spread":0.2375397672628644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220798540","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972801,0.00055595255,0.00041293554,0.00087706774,0.00033106966,0.00009534877,0.00043680542,0.0000020541358,0.000008624582],"genre_scores_gemma":[0.99931085,0.00006742863,0.000012825698,0.0005057683,0.000028851531,9.2619655e-7,0.000054280863,0.00000443218,0.000014617504],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998185,0.00039706484,0.0006632281,0.00011899431,0.0005156607,0.000120084995],"domain_scores_gemma":[0.99829745,0.00018457993,0.0009863006,0.00013575079,0.00024608977,0.00014984296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009089239,0.00007896399,0.00040507162,0.00008806677,0.00014360277,0.0000034189322,0.00013735057,0.00007561266,0.00016674805],"category_scores_gemma":[0.00065365335,0.000060642695,0.00022808544,0.00027445072,0.00008059884,0.000029720753,0.000043769116,0.00031731147,3.6725222e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025730653,0.000091326,0.81029314,0.000034443317,0.0011137067,0.000025827769,0.00011826315,0.0008601827,0.18672027,0.000013681654,0.00037423085,0.00009762768],"study_design_scores_gemma":[0.0018498303,0.000072500094,0.985881,0.0000946799,0.0030044483,0.000034623827,0.00021002232,0.00326024,0.005184677,0.00005919253,0.00025731782,0.000091506714],"about_ca_topic_score_codex":0.026296634,"about_ca_topic_score_gemma":0.024992788,"teacher_disagreement_score":0.1815356,"about_ca_system_score_codex":0.00099838,"about_ca_system_score_gemma":0.0013816494,"threshold_uncertainty_score":0.99279857},"labels":[],"label_agreement":null},{"id":"W4220803774","doi":"10.1080/22221751.2022.2059402","title":"Persistence of an epidemic cluster of <i>Rhodotorula mucilaginosa</i> in multiple geographic regions in China and the emergence of a 5-flucytosine resistant clone","year":2022,"lang":"en","type":"article","venue":"Emerging Microbes & Infections","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Peking Union Medical College Hospital; Chinese Academy of Medical Sciences; National Natural Science Foundation of China","keywords":"Biology; Genotyping; Multilocus sequence typing; Molecular epidemiology; Genotype; Phylogenetic tree; Microbiology; Virology; Genetics; Gene","score_opus":0.0156572362430069,"score_gpt":0.2585342065018657,"score_spread":0.2428769702588588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220803774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99607164,0.0019263567,0.0001721595,0.0009076934,0.000087526576,0.0005529594,0.000050606206,0.000014552651,0.00021648977],"genre_scores_gemma":[0.9987973,0.0006348717,0.0003388606,0.000070078786,0.0000123979025,0.000051536714,0.00001564458,0.00001344602,0.000065846776],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99805534,0.00041030615,0.0007694131,0.00031757192,0.00021080289,0.00023658697],"domain_scores_gemma":[0.99882376,0.00025616464,0.00027003174,0.00049756374,0.00010139953,0.00005108214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013873026,0.0001454016,0.0005267017,0.00041026322,0.00019364625,0.0000028367294,0.00014408748,0.00004879964,0.00007790576],"category_scores_gemma":[0.0004464759,0.00012256249,0.0001901258,0.0011691184,0.0006395415,0.00009544732,0.00014311042,0.0003986173,2.038637e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009678327,0.0007699537,0.7395703,0.00027322493,0.000045609362,0.00000495235,0.0037462767,0.0011405776,0.25272626,0.00046802146,0.00011852436,0.00016844361],"study_design_scores_gemma":[0.003985628,0.00051233155,0.98159796,0.00038177148,0.00013583837,0.00004521626,0.00470917,0.002360216,0.0052597173,0.00041574007,0.0004145987,0.0001818267],"about_ca_topic_score_codex":0.0070163887,"about_ca_topic_score_gemma":0.0058220215,"teacher_disagreement_score":0.24746655,"about_ca_system_score_codex":0.000046162626,"about_ca_system_score_gemma":0.000094088515,"threshold_uncertainty_score":0.999596},"labels":[],"label_agreement":null},{"id":"W4220807299","doi":"10.1016/j.celrep.2021.110187","title":"Calcium-dependent ESCRT recruitment and lysosome exocytosis maintain epithelial integrity during Candida albicans invasion","year":2022,"lang":"en","type":"article","venue":"Cell Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; National Institutes of Health; National Institute of Dental and Craniofacial Research; Institut National de la Santé et de la Recherche Médicale; Deutsche Forschungsgemeinschaft; Svenska Läkaresällskapet; Wellcome Trust","keywords":"Candida albicans; ESCRT; Hypha; Cell biology; Secretion; Biology; Exocytosis; Microbiology; Intracellular; Biochemistry; Endosome","score_opus":0.048841335859111455,"score_gpt":0.2917629533704491,"score_spread":0.24292161751133765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220807299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949625,0.00045753008,0.00007893782,0.0003927576,0.0003365484,0.0009552825,0.000022444223,0.00006645359,0.0027275127],"genre_scores_gemma":[0.9922126,0.00011639499,0.00013754168,0.00022588138,0.00010094846,0.0001613362,0.00004406474,0.000027681774,0.0069735767],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99761176,0.00013049919,0.00055262947,0.0006742729,0.0006489213,0.00038190375],"domain_scores_gemma":[0.998758,0.00005157303,0.00020885385,0.0006248252,0.00006487851,0.00029188066],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009100886,0.00021077578,0.00041032056,0.000103262646,0.00040203147,0.000024338413,0.00007050122,0.000083119405,0.0011274375],"category_scores_gemma":[0.00014218302,0.00018840193,0.00013601538,0.00015632971,0.00009538905,0.00006466385,0.00028669107,0.00059694337,0.000006573643],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079213624,0.0005579128,0.6733239,0.00031949993,0.000060513423,0.009193036,0.0008519399,0.000013432225,0.31245142,0.000044423054,0.00048948376,0.0019022881],"study_design_scores_gemma":[0.0023217013,0.0008585343,0.6135239,0.00015488156,0.00028867202,0.0029434306,0.004901401,0.00004890437,0.36096933,0.0008059863,0.012552818,0.00063044217],"about_ca_topic_score_codex":0.0011520269,"about_ca_topic_score_gemma":0.00032630682,"teacher_disagreement_score":0.05980003,"about_ca_system_score_codex":0.00074875547,"about_ca_system_score_gemma":0.00031361807,"threshold_uncertainty_score":0.99978566},"labels":[],"label_agreement":null},{"id":"W4220836843","doi":"10.1007/s40588-022-00176-0","title":"Correction to: Germination of a Field: Women in Candida albicans Research","year":2022,"lang":"en","type":"article","venue":"Current Clinical Microbiology Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Candida albicans; Germination; Field (mathematics); Biology; Computer science; Botany; Mathematics","score_opus":0.08880065235934943,"score_gpt":0.47028928882459703,"score_spread":0.3814886364652476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220836843","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947936,0.0002284047,0.000021256594,0.0005113656,0.0031816028,0.00047213014,0.0000086414175,0.000012932405,0.00077006617],"genre_scores_gemma":[0.9976529,0.000035107638,0.000017451459,0.00017721039,0.00008078544,0.00009711075,0.00005127567,0.0000063964576,0.0018817749],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976063,0.0005286315,0.0009403944,0.00044732957,0.00011918148,0.00035816664],"domain_scores_gemma":[0.99835473,0.0007789362,0.00018466917,0.00036432606,0.0001873995,0.00012991334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005176865,0.0000761974,0.00041499527,0.00020076869,0.000082430815,0.000002409037,0.000072960116,0.000081077276,0.0007448193],"category_scores_gemma":[0.004988914,0.00007077645,0.00010577661,0.000467228,0.00014940421,0.000018038549,0.0001651591,0.00094211916,0.0000064681153],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006833797,0.0008131826,0.93489623,0.00004414993,0.000014110775,0.000099142344,0.0004140087,0.0000035495668,0.014893268,0.0000079691135,0.021974875,0.02615614],"study_design_scores_gemma":[0.00074753753,0.0028223107,0.8574914,0.00014127942,0.00001679211,0.00026700666,0.0008919737,0.000022520559,0.00091165927,0.00029516642,0.13625349,0.00013890199],"about_ca_topic_score_codex":0.00010626862,"about_ca_topic_score_gemma":0.00020883765,"teacher_disagreement_score":0.11427861,"about_ca_system_score_codex":0.00034043167,"about_ca_system_score_gemma":0.0004749515,"threshold_uncertainty_score":0.8155249},"labels":[],"label_agreement":null},{"id":"W4220847664","doi":"10.1139/cjm-2021-0250","title":"Antifungal activity of [K<sup>3</sup>]temporin-SHa against medically relevant yeasts and moulds","year":2022,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Antifungal; Microbiology; Biology","score_opus":0.013163451757962122,"score_gpt":0.23929302645814382,"score_spread":0.2261295747001817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220847664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99550104,0.0015850456,0.000039727547,0.0018179658,0.00023373525,0.00013175822,0.00018426386,0.000003908645,0.00050256605],"genre_scores_gemma":[0.99855775,0.000111916765,0.00019270573,0.0005616098,0.00010687116,0.0000012671624,0.000022652846,0.000014766265,0.0004304896],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99860984,0.00021935899,0.00048491586,0.00020833904,0.00012153494,0.00035600932],"domain_scores_gemma":[0.9986232,0.0001015456,0.00028764625,0.00021525385,0.00019714421,0.00057522394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086926663,0.0001397069,0.0005615676,0.00026199868,0.00015333957,0.000006183272,0.00018445044,0.0001308174,0.0005372449],"category_scores_gemma":[0.00034952242,0.00012248733,0.00015178086,0.00016435064,0.00044967706,0.0000494065,0.00004854924,0.0007188006,0.0000040434747],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00096345803,0.00015606686,0.29634863,0.00017025789,0.0002955738,0.0018083409,0.0010213663,0.000059257396,0.67180634,0.00013455666,0.018597411,0.0086387815],"study_design_scores_gemma":[0.010022048,0.0068781152,0.56527954,0.00064244255,0.0005468211,0.013926829,0.0046666116,0.00035666494,0.023300475,0.0002703685,0.37312838,0.0009816808],"about_ca_topic_score_codex":0.0006557918,"about_ca_topic_score_gemma":0.002482725,"teacher_disagreement_score":0.6485058,"about_ca_system_score_codex":0.0002422268,"about_ca_system_score_gemma":0.002583795,"threshold_uncertainty_score":0.5882455},"labels":[],"label_agreement":null},{"id":"W4220878145","doi":"10.14740/jnr706","title":"Diagnostic Dilemma of <i>Aspergillus</i> Meningitis in Patients With Hepatitis C Virus Co-Infection: A Case Series","year":2022,"lang":"en","type":"article","venue":"Journal of Neurology Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Meningitis; Brain biopsy; Hepatitis C virus; Immunology; Hepatitis C; Aspergillus; Internal medicine; Biopsy; Pediatrics; Virus","score_opus":0.02962588070862587,"score_gpt":0.3324074750094198,"score_spread":0.30278159430079393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220878145","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99834424,0.000110007124,0.0000043938817,0.0009200164,0.00010221906,0.00026670285,0.000036114125,0.000004163219,0.00021214715],"genre_scores_gemma":[0.9994504,0.00022546187,0.000029350558,0.00012323067,0.00005533834,0.000014401431,0.000004955019,0.000014703863,0.000082194565],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974976,0.0007097655,0.00045792662,0.00017981329,0.000856094,0.00029875842],"domain_scores_gemma":[0.9980728,0.00080988574,0.00017612134,0.00020234336,0.0006191426,0.00011968138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012421949,0.00008917892,0.000388354,0.00040418436,0.00018908932,0.000008044054,0.0000980905,0.000052647578,0.00046644677],"category_scores_gemma":[0.0011805637,0.00007164886,0.00007617348,0.00053856365,0.0003510394,0.00013544603,0.00009244668,0.0012653734,0.0000025097645],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006231881,0.0006079756,0.9656359,0.000053051073,0.000040989737,0.025076564,0.00020930973,0.000058333717,0.00044516235,0.000021595812,0.0011691446,0.0004500733],"study_design_scores_gemma":[0.0022428383,0.016622592,0.96862674,0.000029847914,0.000022679584,0.009141696,0.000048853202,0.000008281052,0.00025431212,0.00004583424,0.0029047492,0.000051597657],"about_ca_topic_score_codex":0.00073279225,"about_ca_topic_score_gemma":0.0013692828,"teacher_disagreement_score":0.016014617,"about_ca_system_score_codex":0.00009006247,"about_ca_system_score_gemma":0.00026050713,"threshold_uncertainty_score":0.54974884},"labels":[],"label_agreement":null},{"id":"W4220878580","doi":"10.1128/mbio.00518-22","title":"Candida auris on Apples: Diversity and Clinical Significance","year":2022,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Candida auris; Fungicide; Biology; Fungal pathogen; Microbiology; Pathogen; Antifungal; Horticulture","score_opus":0.04479568290326274,"score_gpt":0.3169844678641604,"score_spread":0.27218878496089766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220878580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963487,0.00010724976,0.000029777033,0.0005841213,0.0001146193,0.00017647752,0.000027572272,0.000026780546,0.0025847107],"genre_scores_gemma":[0.99563813,0.000050086892,0.00003831142,0.0010653279,0.00006291906,0.00000496613,0.000008383024,0.000004397222,0.0031274972],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992401,0.0000615742,0.00012281665,0.00024265656,0.00021212315,0.000120704004],"domain_scores_gemma":[0.9995585,0.000097003925,0.000031368323,0.00020003635,0.000017174747,0.00009593465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035462147,0.000059489517,0.00016477496,0.000018839793,0.0005196359,0.0000036549025,0.000058204325,0.00002982987,0.00041583323],"category_scores_gemma":[0.000075394295,0.000052863612,0.00006186821,0.000072343566,0.00010646831,0.000014751919,0.00027191936,0.00024262183,0.000017024184],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004038786,0.00016452323,0.9890159,0.000018886256,0.00001925804,0.000048485774,0.00023924117,4.611577e-7,0.00011833504,0.00013980582,0.0077442485,0.0020869756],"study_design_scores_gemma":[0.0007060705,0.00056114874,0.97863513,0.00000788921,0.00003569879,0.0000029133794,0.00057343167,0.000022097407,0.00008567149,0.000085772874,0.019216806,0.00006737193],"about_ca_topic_score_codex":0.0002882638,"about_ca_topic_score_gemma":0.0000973402,"teacher_disagreement_score":0.011472557,"about_ca_system_score_codex":0.000072143346,"about_ca_system_score_gemma":0.00004759442,"threshold_uncertainty_score":0.45530823},"labels":[],"label_agreement":null},{"id":"W4220902852","doi":"10.1007/s11046-022-00616-x","title":"Genotyping and Drug Resistance Profile of Clinical Isolates of Candida albicans from Vulvovaginal Candidiasis in the Eastern China","year":2022,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Government of Jiangsu Province; National Natural Science Foundation of China","keywords":"Anidulafungin; Micafungin; Fluconazole; Voriconazole; Caspofungin; Microbiology; Itraconazole; Posaconazole; Biology; Drug resistance; Echinocandin; Candida dubliniensis; Candida albicans; Amphotericin B; Genotype; Corpus albicans; Antifungal","score_opus":0.025079479417090544,"score_gpt":0.31413244439769133,"score_spread":0.2890529649806008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220902852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949617,0.0023261749,0.000035865425,0.0005767399,0.00008090714,0.00032921843,0.00013779188,0.0000107183605,0.0015409287],"genre_scores_gemma":[0.99838006,0.000108956185,0.00072115706,0.00018901023,0.00003867308,0.000028436712,0.000026624926,0.00000924399,0.0004978308],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982595,0.000350276,0.00060835964,0.0003287457,0.00025899394,0.00019413944],"domain_scores_gemma":[0.9989343,0.0003319733,0.00023443004,0.0004112469,0.00004321037,0.00004483239],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016716408,0.00011664951,0.0005150658,0.00005729643,0.000091528374,0.000006477016,0.00018720319,0.00005025898,0.00020709544],"category_scores_gemma":[0.00036724494,0.00008304775,0.00008445654,0.00023826797,0.00026255296,0.000042181007,0.000110642926,0.0004321253,0.0000014150742],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010852041,0.00017032387,0.99032295,0.000093080525,0.000015253827,0.00009225974,0.0031583891,0.000001563816,0.0030431105,0.00007922166,0.0004045069,0.0015341569],"study_design_scores_gemma":[0.00081266573,0.00020646268,0.99483895,0.00008224812,0.000053001866,0.000010224422,0.0028867736,0.000095612355,0.00029468304,0.00027460526,0.0003652495,0.00007952093],"about_ca_topic_score_codex":0.0018026084,"about_ca_topic_score_gemma":0.0016249194,"teacher_disagreement_score":0.0045160237,"about_ca_system_score_codex":0.000034065135,"about_ca_system_score_gemma":0.00015888883,"threshold_uncertainty_score":0.3386589},"labels":[],"label_agreement":null},{"id":"W4220912787","doi":"10.3389/fcimb.2022.764711","title":"SAGA Complex Subunits in Candida albicans Differentially Regulate Filamentation, Invasiveness, and Biofilm Formation","year":2022,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada; Concordia University; Canadian Institutes of Health Research; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Candida albicans; Mutant; Cell biology; Schizosaccharomyces; Fungal protein; Acetyltransferase; Downregulation and upregulation; Histone acetyltransferase; Schizosaccharomyces pombe; Gene; Transcription factor; Genetics; Acetylation","score_opus":0.01704800885693705,"score_gpt":0.2323941066684107,"score_spread":0.21534609781147365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220912787","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958704,0.0005491307,0.0025595725,0.00020789317,0.00028958014,0.00034356097,0.00003368754,0.000013998099,0.00013218807],"genre_scores_gemma":[0.9981709,0.00041297096,0.0002338669,0.00022431457,0.000016376036,0.000024318422,0.0006673664,0.000007681235,0.00024217037],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99906266,0.00019870837,0.00027676846,0.00023849719,0.00004349397,0.00017987422],"domain_scores_gemma":[0.99973124,0.000020324427,0.00007700267,0.0001017394,0.000029490206,0.000040172556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023913215,0.00010871541,0.00026190386,0.00025720458,0.00014581805,0.000011031474,0.000029195247,0.00007653231,0.00020879201],"category_scores_gemma":[0.000021370608,0.00010979655,0.000030356989,0.0002204219,0.00013342101,0.00008939143,0.000054116474,0.00020253366,7.391068e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022266638,0.000079343044,0.7154669,0.00007846617,0.000014157157,0.000008726332,0.00038519883,0.000016670867,0.28107822,0.00003267989,0.0012785966,0.001338365],"study_design_scores_gemma":[0.003078739,0.0003707616,0.9721432,0.000036319678,0.000035714034,0.00009246619,0.0009040534,0.0007828655,0.010321539,0.00032100725,0.011725917,0.00018742378],"about_ca_topic_score_codex":0.0005391185,"about_ca_topic_score_gemma":0.001173248,"teacher_disagreement_score":0.27075666,"about_ca_system_score_codex":0.00018097815,"about_ca_system_score_gemma":0.00004664838,"threshold_uncertainty_score":0.44773734},"labels":[],"label_agreement":null},{"id":"W4220918721","doi":"10.1038/s41598-022-08738-4","title":"Antifungals influence the immune-related transcriptomic landscape of human monocytes after Aspergillus fumigatus infection","year":2022,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Toronto General Hospital; University Health Network","funders":"Gilead Sciences","keywords":"Aspergillus fumigatus; Transcriptome; Immune system; Biology; Microbiology; Aspergillus; Immunology; Aspergillosis; Gene expression; Gene; Genetics","score_opus":0.010553524096281401,"score_gpt":0.25908308454651063,"score_spread":0.24852956045022923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220918721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99350107,0.0022265366,0.0000042436873,0.00013546631,0.0020838117,0.00053771056,0.000007614285,0.000067281675,0.0014362397],"genre_scores_gemma":[0.99597704,0.000015312422,0.000008871337,0.00003712082,0.000020597381,0.00006272797,0.000053544605,0.000017214526,0.0038075955],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99732614,0.00013694141,0.0008743061,0.0006064505,0.00075285375,0.00030331852],"domain_scores_gemma":[0.9981638,0.00003507305,0.00035633185,0.0011475134,0.00021475599,0.000082514925],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0020262564,0.0001600362,0.00034527393,0.00018079484,0.00076306995,0.00006439068,0.00012425515,0.00006433182,0.0011924602],"category_scores_gemma":[0.00014382278,0.00011586498,0.00029326678,0.00083849544,0.0004991947,0.0001588248,0.000094664305,0.00037755186,0.000010417234],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012241218,0.00015179632,0.52103114,0.000068146575,0.00004943456,0.00019728027,0.0009843177,0.00012438007,0.4764755,0.000044229408,0.000499153,0.00025222843],"study_design_scores_gemma":[0.0003740437,0.00017883898,0.884123,0.00006387185,0.00012034031,0.00027433527,0.00039290328,0.000055512588,0.10996487,0.0012659344,0.0030356955,0.00015062539],"about_ca_topic_score_codex":0.00018786297,"about_ca_topic_score_gemma":0.000081965256,"teacher_disagreement_score":0.36651063,"about_ca_system_score_codex":0.0000913789,"about_ca_system_score_gemma":0.00020927272,"threshold_uncertainty_score":0.9997206},"labels":[],"label_agreement":null},{"id":"W4220972968","doi":"10.1038/s41579-022-00720-1","title":"Tackling the emerging threat of antifungal resistance to human health","year":2022,"lang":"en","type":"review","venue":"Nature Reviews Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1116,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McGill University Health Centre; Ottawa Public Health; University of Ottawa","funders":"European and Developing Countries Clinical Trials Partnership; Rijksinstituut voor Volksgezondheid en Milieu; European Commission; Foreign, Commonwealth and Development Office; Medical Research Council Centre for Medical Mycology; Canadian Institute for Advanced Research; Israel Science Foundation; Biotechnology and Biological Sciences Research Council; Bill and Melinda Gates Foundation; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Sight Research UK; Natural Environment Research Council; Joint Programming Initiative on Antimicrobial Resistance; Medical Research Council; Directorate for Biological Sciences","keywords":"Biology; Antifungal; Resistance (ecology); Antibiotic resistance; Transmission (telecommunications); Drug resistance; Human health; Adaptation (eye); Global health; Public health; Biotechnology; Environmental health; Microbiology; Ecology; Medicine; Antibiotics","score_opus":0.06132439866715442,"score_gpt":0.42010229641203645,"score_spread":0.358777897744882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220972968","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003131612,0.9935075,0.000017059743,0.0006021795,0.00051216903,0.0038891102,0.00021948502,0.00003527418,0.0011859217],"genre_scores_gemma":[0.000059687056,0.9935259,0.00047004892,0.0017631701,0.0002915767,0.00015184129,0.00071006647,0.000071334565,0.0029563461],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99468863,0.0014516299,0.002027275,0.0010007463,0.00018017787,0.0006515194],"domain_scores_gemma":[0.996422,0.00036362367,0.001346024,0.0016076476,0.000105392435,0.00015529389],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0031804147,0.00064469327,0.0054600453,0.00024100654,0.00042193476,0.000010641058,0.0007416154,0.00070210855,0.000725416],"category_scores_gemma":[0.0005477197,0.00037208354,0.0015350073,0.001039505,0.00020598956,0.000026224357,0.00030083605,0.003242726,0.00006227054],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006454931,0.0001453132,0.00009419472,0.09466807,0.0003049996,0.000027611984,0.00016592092,8.125069e-8,0.00054112566,0.0009856789,0.08510145,0.817901],"study_design_scores_gemma":[0.00013505618,0.0001702348,0.00002301413,0.019869432,0.0005311027,0.00010350001,0.000022846083,1.5197347e-8,0.00000766925,0.000013151572,0.97885644,0.0002675219],"about_ca_topic_score_codex":0.000013534862,"about_ca_topic_score_gemma":0.00020160226,"teacher_disagreement_score":0.893755,"about_ca_system_score_codex":0.000464935,"about_ca_system_score_gemma":0.0006763588,"threshold_uncertainty_score":0.9998731},"labels":[],"label_agreement":null},{"id":"W4223992660","doi":"10.1186/s12879-022-07356-9","title":"Development and evaluation of a novel fast broad-range PCR and sequencing assay (FBR-PCR/S) using dual priming oligonucleotides targeting the ITS/LSU gene regions for rapid diagnosis of invasive fungal diseases: multi-year experience in a large Canadian healthcare zone","year":2022,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary; Calgary Laboratory Services","funders":"Alberta Precision Laboratories; Calgary Laboratory Services","keywords":"Biology; Internal transcribed spacer; Parasitology; Voriconazole; Medical microbiology; Real-time polymerase chain reaction; Amplicon; Polymerase chain reaction; Internal medicine; Microbiology; Medicine; Gene; Genetics; Antifungal","score_opus":0.10967585991238227,"score_gpt":0.3355099639535801,"score_spread":0.22583410404119786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4223992660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913327,0.005280219,0.00096112106,0.000054387223,0.00005793061,0.0016839853,0.0006063401,0.00001802157,0.0000053021727],"genre_scores_gemma":[0.99755645,0.00012125078,0.0014568762,0.00012215265,0.000040014438,0.0006056205,0.00007097631,0.000023461906,0.000003214012],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980756,0.00027596345,0.00046171772,0.00038602983,0.0004399731,0.0003607307],"domain_scores_gemma":[0.99852204,0.00043715263,0.00023396128,0.00019355444,0.00036514498,0.0002481327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009286967,0.00017646926,0.00035598772,0.00021315028,0.0006330612,0.000020411519,0.00006258215,0.000044657012,0.0000258943],"category_scores_gemma":[0.0020939626,0.00016045755,0.00008613444,0.00031463458,0.00012519279,0.00014035938,0.000097769705,0.00012557778,9.462342e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016505065,0.00032250886,0.98588544,0.0007792439,0.00004620935,0.0000073006363,0.008803042,0.0004253022,0.0025703297,0.00008098236,0.0000075041294,0.00090709503],"study_design_scores_gemma":[0.0035524804,0.00016189576,0.9502266,0.00040606328,0.00032064412,0.000018785215,0.030939754,0.012610193,0.0015077671,0.000013867668,0.000026708296,0.00021525398],"about_ca_topic_score_codex":0.010901477,"about_ca_topic_score_gemma":0.09712191,"teacher_disagreement_score":0.08622043,"about_ca_system_score_codex":0.0008127043,"about_ca_system_score_gemma":0.0025779908,"threshold_uncertainty_score":0.99568504},"labels":[],"label_agreement":null},{"id":"W4224669774","doi":"10.1038/s41564-022-01091-2","title":"Population genomics confirms acquisition of drug-resistant Aspergillus fumigatus infection by humans from the environment","year":2022,"lang":"en","type":"article","venue":"Nature Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":240,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Environment Research Council; Medical Research Council; Directorate for Biological Sciences; Medical Research Council Centre for Medical Mycology; Trinity College Dublin; Wellcome; Imperial College London; Research Councils UK; Biotechnology and Biological Sciences Research Council; University of Exeter; Cystic Fibrosis Trust; Department of Health and Social Care; National Institute for Health and Care Research; Gilead Sciences; Sight Research UK; Wellcome Trust; Canadian Institute for Advanced Research","keywords":"Biology; Aspergillus fumigatus; Drug resistance; Population; Genetics; Antifungal drug; Genome; Azole; Gene; Clade; Genotype; Microbiology; Candida albicans; Antifungal; Phylogenetics; Medicine","score_opus":0.00489934870791853,"score_gpt":0.22556628810677545,"score_spread":0.22066693939885693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224669774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993931,0.0036139623,0.000057758156,0.000835248,0.0003020197,0.00036089314,0.00074828847,0.00002036245,0.00013050073],"genre_scores_gemma":[0.9949307,0.00011681249,0.00006181785,0.0010073369,0.00007961121,0.000014763686,0.0034901456,0.000013287898,0.00028552223],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99893874,0.0001992233,0.00028435365,0.00030628114,0.00009990066,0.00017150588],"domain_scores_gemma":[0.9993586,0.00009271247,0.00016180536,0.0003259402,0.000030494013,0.000030475747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026930228,0.00012746638,0.00027265548,0.00003379783,0.0002320664,0.00000434277,0.00009421551,0.00020432447,0.0008214068],"category_scores_gemma":[0.000023103496,0.00009540289,0.0001180658,0.00007809335,0.00012371039,0.000021958902,0.00008026553,0.00062344654,0.000009520839],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000486674,0.00012263028,0.09981771,0.000012671502,0.00006247435,0.0000025650663,0.0002295079,0.000025002731,0.89421606,0.0002510602,0.004449093,0.00032457052],"study_design_scores_gemma":[0.0013459644,0.00038488314,0.84475577,0.000016896789,0.00016239099,0.00001351107,0.0003745108,0.000017222275,0.045457184,0.00041730882,0.1068734,0.00018098093],"about_ca_topic_score_codex":0.0008348033,"about_ca_topic_score_gemma":0.00026236582,"teacher_disagreement_score":0.8487589,"about_ca_system_score_codex":0.0003591862,"about_ca_system_score_gemma":0.000034434157,"threshold_uncertainty_score":0.8993828},"labels":[],"label_agreement":null},{"id":"W4225290385","doi":"10.1128/spectrum.00299-22","title":"Small, Cationic Antifungal Proteins from Filamentous Fungi Inhibit <i>Candida albicans</i> Growth in 3D Skin Infection Models","year":2022,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Innovációs és Technológiai Minisztérium; Magyar Tudományos Akadémia; Austrian Science Fund","keywords":"Candida albicans; Microbiology; Antifungal; Biology; Antifungal drugs; Yeast; Antifungal drug; Drug resistance; Skin infection; Corpus albicans; Immunology; Staphylococcus aureus; Bacteria","score_opus":0.014720194035393246,"score_gpt":0.22179440486725535,"score_spread":0.20707421083186212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225290385","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941095,0.0006395532,0.0008274215,0.0012101996,0.0002660065,0.0010010465,0.0002829934,0.00009658095,0.0015666598],"genre_scores_gemma":[0.99592286,0.00013040936,0.00033923448,0.0011991229,0.00012804651,0.00015520003,0.0008413813,0.00003211382,0.0012516165],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99790627,0.00024439604,0.00047479005,0.00071234687,0.00011309319,0.00054907915],"domain_scores_gemma":[0.9992498,0.00006478014,0.00014519438,0.00040839353,0.00004431646,0.000087475666],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036425373,0.00025602785,0.00047906017,0.00022185064,0.00025968454,0.000019207278,0.00015597166,0.00016842708,0.0016498057],"category_scores_gemma":[0.00003586262,0.00025756046,0.00014344708,0.00046580195,0.00015609404,0.0000984788,0.00017690565,0.0007340515,0.000055739172],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00089894555,0.0007907789,0.27154186,0.000058095782,0.000109466404,0.00010389359,0.0005959894,0.00018257747,0.7225508,0.0006126871,0.001964379,0.00059054163],"study_design_scores_gemma":[0.009691984,0.003074868,0.71135,0.0002152548,0.0003120541,0.00048182305,0.00061702,0.0014638028,0.24302079,0.010547326,0.017724942,0.0015000994],"about_ca_topic_score_codex":0.00688234,"about_ca_topic_score_gemma":0.008387408,"teacher_disagreement_score":0.47953,"about_ca_system_score_codex":0.00071748067,"about_ca_system_score_gemma":0.000318207,"threshold_uncertainty_score":0.99998766},"labels":[],"label_agreement":null},{"id":"W4225605120","doi":"10.3389/fmicb.2022.833655","title":"Genetic Screening of Candida albicans Inactivation Mutants Identifies New Genes Involved in Macrophage-Fungal Cell Interactions","year":2022,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Concordia University","keywords":"Candida albicans; Mutant; Gene; Biology; Macrophage; Microbiology; Genetic screen; Cell; Fungal protein; Genetics; In vitro","score_opus":0.013156361146617503,"score_gpt":0.2523347549169017,"score_spread":0.23917839377028421,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225605120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99337184,0.0020750286,0.003171816,0.00017605574,0.0006664904,0.00031972362,0.000056531375,0.000012712677,0.00014976793],"genre_scores_gemma":[0.99148524,0.00010458573,0.005841982,0.00014349571,0.00004321006,0.000020644677,0.0000814791,0.000015445048,0.002263922],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986938,0.00015497017,0.00046294692,0.00033528288,0.00007417118,0.00027878865],"domain_scores_gemma":[0.9994714,0.00005136777,0.00015248689,0.00023245411,0.000040417115,0.00005183274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021068566,0.0001340935,0.0004044178,0.00039569137,0.00007657542,0.0000048160164,0.00014232156,0.00007901552,0.0003899895],"category_scores_gemma":[0.00005471341,0.00014299474,0.00007864504,0.00043523737,0.00012758658,0.000062171945,0.00010386032,0.00040466923,0.0000021054182],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042902006,0.00010060232,0.51808274,0.000040227882,0.000020566533,0.00004087959,0.00052351033,0.00011023832,0.4758124,0.0000017100542,0.002290493,0.0025476313],"study_design_scores_gemma":[0.003806438,0.00044319974,0.8332026,0.00011758921,0.00007667578,0.00007552287,0.014228708,0.0007061373,0.13938235,0.0002909861,0.0073256358,0.00034416886],"about_ca_topic_score_codex":0.002857722,"about_ca_topic_score_gemma":0.003615253,"teacher_disagreement_score":0.33643004,"about_ca_system_score_codex":0.00033444786,"about_ca_system_score_gemma":0.000218522,"threshold_uncertainty_score":0.58311564},"labels":[],"label_agreement":null},{"id":"W4225658865","doi":"10.1128/aac.02406-21","title":"Differential Response of <i>Candida</i> Species Morphologies and Isolates to Fluconazole and Boric Acid","year":2022,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada; University of Manitoba","keywords":"Fluconazole; Candida albicans; Corpus albicans; Microbiology; Biology; Boric acid; Azole; Biofilm; Population; Yeast; Drug resistance; Antifungal drug; Candida glabrata; Bacteria; Chemistry; Antifungal; Medicine; Biochemistry; Genetics","score_opus":0.012131764598281598,"score_gpt":0.24948882395646707,"score_spread":0.23735705935818546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225658865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986736,0.00013734556,0.000033836317,0.012692188,0.000049386228,0.0002294434,0.000056885423,0.000019206307,0.0000457063],"genre_scores_gemma":[0.9824636,0.0007888867,0.00015444338,0.015747387,0.000037397742,0.000004996992,0.000009320639,0.000013970504,0.00078000646],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999214,0.00003713667,0.00018039205,0.00027646546,0.000108121516,0.00018388638],"domain_scores_gemma":[0.9996603,0.000040148432,0.000051610674,0.00014860695,0.000028946315,0.00007038223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011821679,0.00013639491,0.00029953074,0.000066921326,0.00017199869,0.000022259857,0.00005513355,0.00004574214,0.00032831467],"category_scores_gemma":[0.000018337192,0.00011514411,0.000044609766,0.00010272655,0.00016667122,0.000038684815,0.000109560155,0.00012792487,8.1090707e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003945361,0.00011206717,0.16649798,0.000057008787,0.000048208163,0.000018076582,0.0008229281,1.6506132e-7,0.8106232,0.000011742524,0.016502105,0.0013611598],"study_design_scores_gemma":[0.0018845627,0.0006836666,0.8043127,0.00002606773,0.000036348498,0.000054637025,0.00051630364,0.000010987448,0.17184998,0.000029069774,0.020440634,0.00015503819],"about_ca_topic_score_codex":0.00003306887,"about_ca_topic_score_gemma":0.000003630732,"teacher_disagreement_score":0.6387732,"about_ca_system_score_codex":0.000017726195,"about_ca_system_score_gemma":0.000025373382,"threshold_uncertainty_score":0.46954408},"labels":[],"label_agreement":null},{"id":"W4225872437","doi":"10.1111/tid.13832","title":"Antifungal prophylaxis in adult lung transplant recipients: Uncertainty despite 30 years of experience. A systematic review of the literature and network meta‐analysis","year":2022,"lang":"en","type":"review","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University Health Network; Toronto General Hospital; University of Toronto; Impact; Ted Rogers Centre for Heart Research","funders":"","keywords":"Medicine; Amphotericin B; Itraconazole; Intensive care medicine; Randomized controlled trial; Meta-analysis; Aspergillosis; Systematic review; Lung transplantation; Antifungal; Internal medicine; Transplantation; MEDLINE; Immunology; Biology","score_opus":0.025056399312280542,"score_gpt":0.30310372844517425,"score_spread":0.2780473291328937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225872437","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007662455,0.9857702,0.000017453001,0.000008233699,0.000104094324,0.0045207753,0.0018522108,0.000026330184,0.00003824],"genre_scores_gemma":[0.13126186,0.86741805,0.0000052061596,0.0001042463,0.000020720227,0.00074071524,0.0003733065,0.000033281354,0.000042624102],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9950041,0.001306852,0.0018067013,0.0007037214,0.00079695374,0.00038163885],"domain_scores_gemma":[0.99725217,0.0005052044,0.00077920884,0.0010805489,0.0001457354,0.00023713373],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00093446055,0.0005569073,0.0060117454,0.0003221007,0.00009843057,0.000019022304,0.000324462,0.0002012595,0.00036794564],"category_scores_gemma":[0.00023778086,0.00034153785,0.003487464,0.0028177288,0.00020576679,0.00007396137,0.000036209873,0.0007261181,0.0000010533951],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015274137,0.00031724668,0.011117372,0.9673145,0.019225087,0.00021607865,0.001027132,0.000022834074,3.4497953e-7,0.000046764922,0.000007932617,0.0005520006],"study_design_scores_gemma":[0.0003624842,0.00013576409,0.002332487,0.5826318,0.4137054,0.00005020167,0.000020249416,0.000023136206,3.0256714e-7,0.0000125703245,0.0003842481,0.00034131552],"about_ca_topic_score_codex":0.0000897776,"about_ca_topic_score_gemma":0.00009243884,"teacher_disagreement_score":0.39448032,"about_ca_system_score_codex":0.00014288235,"about_ca_system_score_gemma":0.00039794008,"threshold_uncertainty_score":0.9999037},"labels":[],"label_agreement":null},{"id":"W4226128154","doi":"10.3389/fcimb.2021.770478","title":"Transcriptional Control of Hypoxic Hyphal Growth in the Fungal Pathogen Candida albicans","year":2022,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université Laval; Montreal Heart Institute","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Filamentation; Candida albicans; Biology; Transcription factor; Cell biology; Corpus albicans; Virulence; Gene; Phenotype; Transcriptional regulation; Genetics; Fungal protein; Gene regulatory network; Mutant; Genetic screen; Regulation of gene expression; Hypha; Gene expression; Microbiology","score_opus":0.0071761907769242236,"score_gpt":0.20809553875175985,"score_spread":0.20091934797483563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226128154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99033326,0.0024413094,0.0056506363,0.00031778833,0.00041651496,0.00034261282,0.00012453677,0.0000067562196,0.00036660896],"genre_scores_gemma":[0.9990486,0.00015797144,0.0000927279,0.00041651374,0.000035863326,0.000034980716,0.00010360439,0.000006156059,0.000103578255],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988916,0.0003601889,0.00027639358,0.00021752017,0.00006746006,0.0001868505],"domain_scores_gemma":[0.9997379,0.00004466127,0.00005632393,0.00010629955,0.000028432327,0.000026349964],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006138836,0.00009760038,0.00028896265,0.00016534401,0.000090576104,0.0000032303417,0.00005986963,0.00007809333,0.00014481168],"category_scores_gemma":[0.00003083702,0.00007779993,0.0000893698,0.00021669189,0.00018510257,0.000031848238,0.000014163248,0.0003272535,6.6141445e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041281484,0.00019705862,0.68311465,0.000033895834,0.000023566708,0.000022257373,0.00036615654,0.00001304674,0.31464273,0.00027476644,0.0005701364,0.00032896464],"study_design_scores_gemma":[0.008528579,0.0014551352,0.95100987,0.000026991303,0.00013583564,0.00041847004,0.002077099,0.00039530566,0.005704889,0.0009986296,0.02897522,0.00027399455],"about_ca_topic_score_codex":0.00032674332,"about_ca_topic_score_gemma":0.00014108466,"teacher_disagreement_score":0.30893782,"about_ca_system_score_codex":0.00009581939,"about_ca_system_score_gemma":0.00007831826,"threshold_uncertainty_score":0.3172589},"labels":[],"label_agreement":null},{"id":"W4226484267","doi":"10.1016/b978-0-12-821618-7.00042-0","title":"Interactions Between Intracellular Fungal Pathogens and Host Phagocytes","year":2022,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"MaRS","funders":"","keywords":"Phagolysosome; Phagosome; Phagocytosis; Internalization; Biology; Microbiology; Phagocyte; Intracellular; Endosome; Immune system; Intracellular parasite; Cell biology; Immunology; Cell","score_opus":0.023439552967383696,"score_gpt":0.26916305019175624,"score_spread":0.24572349722437253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226484267","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011968333,0.0045301374,0.0000059129948,0.00022069013,0.00027596133,0.00074886176,0.00033104946,0.00009506195,0.981824],"genre_scores_gemma":[0.10919827,0.00042713396,0.00017223528,0.00024091521,0.0006167498,0.00003114482,0.0001441612,0.00009521297,0.88907415],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99800295,0.000042849788,0.0005276472,0.0006638424,0.0004431834,0.00031950735],"domain_scores_gemma":[0.9985858,0.00017690597,0.00021047867,0.0006470088,0.000109229164,0.00027052773],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00030269215,0.00043679375,0.0008388293,0.00017258736,0.00027095285,0.00003517365,0.00012821035,0.00023488779,0.003499598],"category_scores_gemma":[0.000058908114,0.00041281353,0.00032852052,0.000018232739,0.00025728004,0.000056400397,0.00020000976,0.0012580683,0.00011094488],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015849818,0.000032351847,0.0074792197,0.00036792556,0.00045455544,0.0005147479,0.00035145268,2.5866193e-8,0.0016729537,0.0023040688,0.00029494442,0.98636925],"study_design_scores_gemma":[0.00042436417,0.00023342994,0.0050063594,0.00030918934,0.0007713595,0.00008979501,0.00006215574,0.0000016852558,0.00030227235,0.000677769,0.9917421,0.00037954588],"about_ca_topic_score_codex":0.0000016401981,"about_ca_topic_score_gemma":0.000037571328,"teacher_disagreement_score":0.99144715,"about_ca_system_score_codex":0.00020687313,"about_ca_system_score_gemma":0.00019937917,"threshold_uncertainty_score":0.9998324},"labels":[],"label_agreement":null},{"id":"W4229369340","doi":"10.1128/msphere.00075-22","title":"High-Throughput Chemical Screen Identifies a 2,5-Disubstituted Pyridine as an Inhibitor of Candida albicans Erg11","year":2022,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Toronto","funders":"Canadian Institutes of Health Research; Government of Canada; National Institutes of Health; Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology; National Institute of Allergy and Infectious Diseases; Japan Agency for Medical Research and Development","keywords":"Candida albicans; Throughput; Chemistry; Pharmacology; Microbiology; Medicine; Computer science; Biology; Telecommunications","score_opus":0.013320172443624809,"score_gpt":0.2734527948893917,"score_spread":0.2601326224457669,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229369340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99620414,0.0004892905,0.000041117513,0.0005297406,0.00021364786,0.0003185519,0.00013331005,0.00008505055,0.0019851273],"genre_scores_gemma":[0.9957367,0.000022445445,0.00038731517,0.0002672978,0.0002150045,0.000034295444,0.00022084216,0.000028601,0.0030874955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823475,0.000050982126,0.00039433257,0.00043313485,0.0005912724,0.00029555464],"domain_scores_gemma":[0.99896115,0.00004378816,0.000113847585,0.0005731013,0.00012358719,0.00018454573],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023025963,0.00017968193,0.0004706943,0.000027992117,0.00016133416,0.000014663578,0.00019358803,0.00008048822,0.0069068354],"category_scores_gemma":[0.0001431864,0.00016677234,0.00014460528,0.00034894154,0.0002283452,0.00013150272,0.00014918424,0.0003269115,0.00003215858],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0056651067,0.0023280377,0.1417514,0.0005826208,0.00041526445,0.0005893488,0.0021538765,0.00011395341,0.79588765,0.0047396566,0.038223244,0.007549868],"study_design_scores_gemma":[0.013190451,0.0043267338,0.290063,0.00061868,0.0010043193,0.00025436212,0.018116789,0.0007722954,0.62035745,0.00441974,0.04515088,0.0017253245],"about_ca_topic_score_codex":0.0040963357,"about_ca_topic_score_gemma":0.0014407757,"teacher_disagreement_score":0.1755302,"about_ca_system_score_codex":0.00016197708,"about_ca_system_score_gemma":0.00028811707,"threshold_uncertainty_score":0.994001},"labels":[],"label_agreement":null},{"id":"W4230025159","doi":"10.3410/f.717968784.793468426","title":"Faculty Opinions recommendation of The evolutionary rewiring of ubiquitination targets has reprogrammed the regulation of carbon assimilation in the pathogenic yeast Candida albicans.","year":2013,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Candida albicans; Yeast; Assimilation (phonology); Carbon assimilation; Ubiquitin; Microbiology; Biology; Gene; Genetics; Biochemistry","score_opus":0.04040672225882996,"score_gpt":0.3349179251062687,"score_spread":0.29451120284743876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230025159","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001964987,0.0013824095,0.0000192912,0.14166221,0.0003795725,0.0030858037,0.85316753,0.000012956177,0.00009372166],"genre_scores_gemma":[0.023186427,0.00024133208,0.00018165016,0.0009256039,0.00016471838,0.00026599105,0.9747434,0.000018328581,0.00027251124],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99406916,0.0011237639,0.002052153,0.00053225656,0.0019369697,0.0002857027],"domain_scores_gemma":[0.9901471,0.00028949438,0.0025557973,0.001983397,0.0049267467,0.00009743086],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0031702605,0.00036816922,0.00083007367,0.00024174846,0.00024224831,0.0000465587,0.0010931991,0.0005312443,0.00014834589],"category_scores_gemma":[0.00888068,0.0001760619,0.0006170933,0.0023592347,0.0007752077,0.00022452083,0.00024934643,0.0009734213,0.0000024601688],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005276203,0.00041065816,0.00061158685,0.0044381996,0.00009024437,8.962658e-8,0.0005319748,9.379592e-7,0.000082801445,0.0002615811,0.9912801,0.0022390867],"study_design_scores_gemma":[0.0004970891,0.00009925071,0.27960497,0.006475749,0.00022449536,0.000013129591,0.00017557455,0.00010099463,0.000052814477,0.0000650136,0.7125676,0.0001233073],"about_ca_topic_score_codex":0.00044723757,"about_ca_topic_score_gemma":0.00011794527,"teacher_disagreement_score":0.2789934,"about_ca_system_score_codex":0.00022325874,"about_ca_system_score_gemma":0.0008358577,"threshold_uncertainty_score":0.9994679},"labels":[],"label_agreement":null},{"id":"W4230195855","doi":"10.1007/978-3-030-25869-6_44","title":"Aspergillus in Solid Organ and Stem Cell Transplant Patients: Emerging Options for Diagnosis and Management","year":2021,"lang":"en","type":"book-chapter","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Aspergillosis; Intensive care medicine; Medicine; Antifungal; Hematopoietic stem cell; Epidemiology; Hematopoietic stem cell transplantation; Disease; Solid organ; Stem cell; Organ transplantation; Transplantation; Internal medicine; Immunology; Haematopoiesis; Biology; Dermatology","score_opus":0.019648322380971018,"score_gpt":0.2552221861241773,"score_spread":0.23557386374320627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230195855","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31268892,0.018106718,0.0014909462,0.0016386643,0.00043947055,0.0067702862,0.0007083784,0.00013437976,0.6580222],"genre_scores_gemma":[0.49780113,0.057381254,0.00090692483,0.00039522673,0.00005969582,0.0001221416,0.00032312734,0.00006944675,0.44294107],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988079,0.00000845699,0.00034101302,0.00047450291,0.00017218711,0.0001959301],"domain_scores_gemma":[0.999473,0.00006657096,0.000055555083,0.00021725093,0.000077821394,0.0001098487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010347813,0.00023391414,0.00045296625,0.00012289776,0.000069051086,0.000018956836,0.00003623711,0.00015711777,0.00029814694],"category_scores_gemma":[0.0000033983683,0.000203528,0.000088412235,0.000026403108,0.000054727392,0.000041631058,0.000039948765,0.00015110784,0.0000034348013],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017009246,0.0020212927,0.5233201,0.03346161,0.0016381061,0.0012782448,0.0044219536,0.000007874549,0.00027539142,0.21038273,0.008299395,0.21319242],"study_design_scores_gemma":[0.032038853,0.003660816,0.40423968,0.02224577,0.006794137,0.000042610427,0.0076107886,0.0004629588,0.0028595752,0.0045444374,0.5108088,0.0046915403],"about_ca_topic_score_codex":0.0000120583945,"about_ca_topic_score_gemma":0.00044204772,"teacher_disagreement_score":0.5025094,"about_ca_system_score_codex":0.00007040721,"about_ca_system_score_gemma":0.000024776757,"threshold_uncertainty_score":0.8299631},"labels":[],"label_agreement":null},{"id":"W4230469386","doi":"10.1128/jcm.42.4.1716-1718.2004","title":"Quality Control Limits for Voriconazole Disk Susceptibility Tests on Mueller-Hinton Agar with Glucose and Methylene Blue","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; Alberta Hospital Edmonton","funders":"","keywords":"Agar; Methylene blue; Candida krusei; Microbiology; Candida albicans; Candida parapsilosis; Voriconazole; Candida tropicalis; Agar plate; Agar dilution; Biology; Agar diffusion test; Chemistry; Chromatography; Minimum inhibitory concentration; Antifungal; Bacteria; Biochemistry; Antimicrobial; Escherichia coli","score_opus":0.06028625515444849,"score_gpt":0.40866777458339554,"score_spread":0.348381519428947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230469386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916719,0.00080958044,0.002858269,0.0035674179,0.0003856919,0.0005457141,0.00006728769,0.0000145166,0.00007957446],"genre_scores_gemma":[0.99378127,0.0003974218,0.0030866116,0.002159976,0.0004441257,0.0000038565786,0.0000108145405,0.000018995857,0.00009695615],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99683267,0.0004234948,0.00179976,0.00046157726,0.00012168101,0.00036084687],"domain_scores_gemma":[0.9942099,0.003459042,0.00091517495,0.00038894083,0.0006846587,0.00034230336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0041142306,0.00024502596,0.0015411377,0.000071641334,0.000083182815,0.000012591854,0.00015144846,0.00037692202,0.000031255313],"category_scores_gemma":[0.0055033914,0.00014982001,0.00047565083,0.00009721786,0.00060374994,0.000077134995,0.000023684805,0.00077336706,0.000008982147],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0472291,0.0035718654,0.6160371,0.00027591104,0.00073010405,0.00008503706,0.0002034655,0.00004022449,0.3111676,0.0005742179,0.00053625664,0.019549157],"study_design_scores_gemma":[0.02633253,0.017610159,0.9317954,0.00029398527,0.00037812736,0.00024610106,0.00018966233,0.000004893982,0.0146789225,0.0017250502,0.0064644953,0.0002806364],"about_ca_topic_score_codex":0.000018232564,"about_ca_topic_score_gemma":0.00028367311,"teacher_disagreement_score":0.31575838,"about_ca_system_score_codex":0.000100981495,"about_ca_system_score_gemma":0.00038658193,"threshold_uncertainty_score":0.6588471},"labels":[],"label_agreement":null},{"id":"W4230500257","doi":"10.1007/978-90-481-2408-4_51","title":"Cardiac Aspergillosis","year":2009,"lang":"en","type":"book-chapter","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Aspergillosis; Endocarditis; Medicine; Context (archaeology); Mycosis; Surgery; Intensive care medicine; Immunology; Biology","score_opus":0.020108880242529534,"score_gpt":0.26073459485772427,"score_spread":0.24062571461519472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230500257","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017142593,0.0018102783,0.000011760063,0.00053172914,0.0001274443,0.00027107712,0.000019446354,0.00010605463,0.9969508],"genre_scores_gemma":[0.019084128,0.0013359446,0.00030873733,0.001047149,0.0003572222,0.0000014556101,0.000064643566,0.000034963643,0.97776574],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.998856,0.0000045764623,0.00024238341,0.0003706992,0.00034693722,0.00017941087],"domain_scores_gemma":[0.9990836,0.000025728566,0.000051959818,0.000568892,0.00011587295,0.00015396584],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00010083337,0.00025058887,0.0006313053,0.00006565659,0.00003781747,0.000009058597,0.000059363305,0.00037540548,0.005530062],"category_scores_gemma":[0.000023868031,0.00019421839,0.00049719645,0.000014026302,0.00007065312,0.000023160961,0.000019778543,0.00033395216,0.0011691712],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045682339,0.000111976806,0.006619563,0.00038567005,0.00081360876,0.00034134815,0.000054181142,1.1043327e-7,0.0009701665,0.4467785,0.2945997,0.24886835],"study_design_scores_gemma":[0.00018782458,0.00020279417,0.011065144,0.00020845357,0.00032969535,0.0000042612082,0.000007866668,7.8700435e-7,0.00014561215,0.005016821,0.9825713,0.00025942546],"about_ca_topic_score_codex":0.000009479603,"about_ca_topic_score_gemma":0.000012438709,"teacher_disagreement_score":0.6879716,"about_ca_system_score_codex":0.000105421816,"about_ca_system_score_gemma":0.000112905494,"threshold_uncertainty_score":0.9996085},"labels":[],"label_agreement":null},{"id":"W4231022997","doi":"10.1093/mmy/myx132","title":"Transcriptional profile of the human skin pathogenic fungus Mucor irregularis in response to low oxygen","year":2017,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Mucor; Fungus; Microbiology; Biology; Botany","score_opus":0.017429812420373524,"score_gpt":0.3134301501019337,"score_spread":0.2960003376815602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231022997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843165,0.00009271867,0.00006234192,0.013734998,0.00026128205,0.00053232297,0.000025563142,0.000011287797,0.0009629678],"genre_scores_gemma":[0.9957377,0.000009322147,0.00012382057,0.0011606083,0.00011607214,0.000053239906,0.0000069947832,0.000011181089,0.0027810687],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981039,0.00032642213,0.00039771732,0.00031352136,0.0005510037,0.00030741116],"domain_scores_gemma":[0.99865615,0.00017773129,0.000096193435,0.0007599823,0.00008396607,0.00022595748],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015883396,0.00011466177,0.0003899676,0.0000765423,0.000172516,0.0000063246475,0.00044775443,0.00028225838,0.0023929416],"category_scores_gemma":[0.0032455437,0.00007735619,0.00015659587,0.000093138784,0.00054540264,0.000030542593,0.00011199887,0.00036382765,0.000041658932],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005403833,0.00092965213,0.35302028,0.00019139827,0.00005516895,0.00039322968,0.0007910866,6.3116937e-7,0.62502337,0.0016752654,0.0042065955,0.008309479],"study_design_scores_gemma":[0.0015861603,0.00036275643,0.9908988,0.00011066358,0.00002424849,0.000022224216,0.00007579445,0.000032335756,0.0018325783,0.0002111412,0.0047716633,0.000071635164],"about_ca_topic_score_codex":0.00009759451,"about_ca_topic_score_gemma":0.00089849863,"teacher_disagreement_score":0.63787854,"about_ca_system_score_codex":0.000087450884,"about_ca_system_score_gemma":0.0004746206,"threshold_uncertainty_score":0.998519},"labels":[],"label_agreement":null},{"id":"W4232186595","doi":"10.3410/f.1115777.571860","title":"Faculty Opinions recommendation of Empirical fluconazole versus placebo for intensive care unit patients: a randomized trial.","year":2008,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Fluconazole; Medicine; Placebo; Discontinuation; Intensive care unit; Randomized controlled trial; Internal medicine; Relative risk; Intensive care medicine; Antifungal","score_opus":0.07493744474646298,"score_gpt":0.4193571139813497,"score_spread":0.34441966923488676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232186595","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000013761649,0.0013832519,0.00004321718,0.08517924,0.0015491792,0.008796212,0.9029304,0.000035365945,0.00006941491],"genre_scores_gemma":[0.000038980732,0.0007157795,0.00041305958,0.0059450003,0.0003597142,0.0010287907,0.99067074,0.000034493536,0.0007934457],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9939788,0.00078411226,0.0023985633,0.0008228827,0.0016024116,0.00041322724],"domain_scores_gemma":[0.96545327,0.0010818511,0.0018597492,0.0015368066,0.029684922,0.00038342967],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00146691,0.00062543404,0.0024818748,0.0003480782,0.0002754106,0.00005270836,0.00086067594,0.00095221214,0.0002775017],"category_scores_gemma":[0.067688465,0.00038007082,0.0018310543,0.0013559018,0.00079894,0.0002177567,0.00029118155,0.0011003535,0.000026417407],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.09291161,0.000531295,0.000016825892,0.009034127,0.00037559526,2.6710225e-7,0.00031610596,1.8961574e-8,1.5396319e-7,0.000044836324,0.89608765,0.000681517],"study_design_scores_gemma":[0.23706548,0.0006413479,0.00039332744,0.0068045827,0.0007033452,0.0000054375087,0.00023620893,0.0000048054167,0.000005280489,0.000005979187,0.7538847,0.00024950472],"about_ca_topic_score_codex":0.00003481812,"about_ca_topic_score_gemma":0.000010026257,"teacher_disagreement_score":0.14415388,"about_ca_system_score_codex":0.00023803144,"about_ca_system_score_gemma":0.0013643878,"threshold_uncertainty_score":0.9998651},"labels":[],"label_agreement":null},{"id":"W4232270537","doi":"10.1128/aac.01730-10","title":"Wild-Type MIC Distributions and Epidemiological Cutoff Values for Caspofungin and Aspergillus spp. for the CLSI Broth Microdilution Method (M38-A2 Document)","year":2011,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta Hospital; Alberta Hospital Edmonton","funders":"","keywords":"Caspofungin; Broth microdilution; Microbiology; Aspergillus flavus; Biology; Aspergillus terreus; Population; Aspergillus niger; Veterinary medicine; Minimum inhibitory concentration; Antimicrobial; Food science; Antifungal; Medicine; Amphotericin B","score_opus":0.049784629016380526,"score_gpt":0.3344340709084381,"score_spread":0.28464944189205754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232270537","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96355224,0.0008962392,0.029277217,0.004613179,0.00011557125,0.0013400891,0.00012885971,0.00003337259,0.000043233984],"genre_scores_gemma":[0.970434,0.0062278644,0.016313039,0.005858675,0.00015222839,0.000030739837,0.00010169349,0.000024548704,0.0008571932],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99880874,0.00005108629,0.00029653864,0.0004455053,0.00006472905,0.00033337186],"domain_scores_gemma":[0.9992099,0.0002736242,0.000097492164,0.00020840853,0.0001012002,0.000109383116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005844401,0.00022379975,0.0004128968,0.00002849379,0.00038712306,0.000027284188,0.000073887466,0.00015412812,0.00007835844],"category_scores_gemma":[0.00011166747,0.00014078042,0.00013198465,0.00007494905,0.00029397986,0.00007917859,0.000031174273,0.00011636231,0.0000016437397],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013432481,0.0012263459,0.41552413,0.0011513628,0.0016625547,0.000019658903,0.0034441452,0.0000018477789,0.24466318,0.0053506545,0.21853511,0.09498855],"study_design_scores_gemma":[0.006095423,0.0011150038,0.8349778,0.0001601698,0.00059605925,0.00012905968,0.00028181454,0.0005944369,0.041077945,0.0050865007,0.10938644,0.000499368],"about_ca_topic_score_codex":0.00016795956,"about_ca_topic_score_gemma":0.000025457473,"teacher_disagreement_score":0.41945368,"about_ca_system_score_codex":0.000033015418,"about_ca_system_score_gemma":0.00003568045,"threshold_uncertainty_score":0.57408595},"labels":[],"label_agreement":null},{"id":"W4232464325","doi":"10.3410/f.13042957.14361055","title":"Faculty Opinions recommendation of An iron homeostasis regulatory circuit with reciprocal roles in Candida albicans commensalism and pathogenesis.","year":2011,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Commensalism; Reciprocal; Candida albicans; Pathogenesis; Microbiology; Homeostasis; Biology; Immunology; Cell biology; Bacteria; Genetics","score_opus":0.0342544662670059,"score_gpt":0.32833411192513057,"score_spread":0.29407964565812467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232464325","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020125181,0.002164689,0.000012084094,0.044922397,0.00017511562,0.0015836167,0.950872,0.000027600194,0.000041231844],"genre_scores_gemma":[0.00074245804,0.00088179484,0.00039580616,0.0032882562,0.00012440376,0.0001681734,0.99411696,0.000034989644,0.00024714624],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99545884,0.00056503963,0.0014804424,0.00086549897,0.001239342,0.00039084637],"domain_scores_gemma":[0.99379,0.000112021466,0.0010747022,0.001688538,0.0028823386,0.00045243328],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016531405,0.00054914295,0.0013549789,0.00039576794,0.00016799422,0.000054284865,0.0006887723,0.00075622665,0.00025903375],"category_scores_gemma":[0.0021330998,0.00034130484,0.00030540364,0.0013719087,0.0006892768,0.00032168446,0.00022007214,0.0010108063,0.000005639161],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015124315,0.0007101835,0.00050610345,0.0084223235,0.00009788875,0.0000020439657,0.0003339243,2.0202487e-8,0.000005425775,0.00014940008,0.982537,0.0070844833],"study_design_scores_gemma":[0.0011702616,0.00043377644,0.09566096,0.011639742,0.00029798588,0.000061389,0.000149744,0.0000029258658,0.000016188918,0.000023169281,0.89023167,0.0003121877],"about_ca_topic_score_codex":0.00031624967,"about_ca_topic_score_gemma":0.00035742306,"teacher_disagreement_score":0.09515486,"about_ca_system_score_codex":0.00017889265,"about_ca_system_score_gemma":0.00075664226,"threshold_uncertainty_score":0.9999039},"labels":[],"label_agreement":null},{"id":"W4232611432","doi":"10.1007/978-1-4614-8678-7_63","title":"Chronic Mucocutaneous Candidiasis, ACT1 Deficiency","year":2020,"lang":"en","type":"book-chapter","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Children's Hospital","funders":"","keywords":"Chronic mucocutaneous candidiasis; Mucocutaneous zone; Medicine; Dermatology; Immunology; Pathology; Disease","score_opus":0.0218250340185907,"score_gpt":0.25720194430112175,"score_spread":0.23537691028253105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232611432","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000340407,0.00906255,0.0000970722,0.0012293736,0.00015884283,0.00049301755,0.00003695655,0.00018557202,0.9883962],"genre_scores_gemma":[0.33209214,0.0011965533,0.000112082365,0.00080795656,0.00054982246,0.0000032080015,0.0000821971,0.000060632854,0.6650954],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99812895,0.0000070713386,0.00039245398,0.000654823,0.0004967906,0.00031993465],"domain_scores_gemma":[0.99878395,0.00006030413,0.000113324924,0.00061026076,0.000110278765,0.00032189168],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00007602432,0.00038845546,0.0007118933,0.00007213704,0.00007920591,0.000025422967,0.00015012514,0.00041384556,0.01004425],"category_scores_gemma":[0.00007564905,0.0003116965,0.0003603428,0.000036734968,0.00016503784,0.0000398163,0.00006923599,0.0006347712,0.0019907614],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001544077,0.00023220414,0.002554057,0.004574363,0.00092552113,0.012313218,0.00057919975,0.0000028327447,0.0054562255,0.60809475,0.1455817,0.21814181],"study_design_scores_gemma":[0.0008084334,0.0014244587,0.0009214846,0.00055649795,0.00060749723,0.00027159488,0.000052662283,0.0000310218,0.00040532852,0.003318845,0.9907975,0.0008046548],"about_ca_topic_score_codex":0.000049374044,"about_ca_topic_score_gemma":0.00041749282,"teacher_disagreement_score":0.8452158,"about_ca_system_score_codex":0.00046226822,"about_ca_system_score_gemma":0.0009778457,"threshold_uncertainty_score":0.99993354},"labels":[],"label_agreement":null},{"id":"W4232935260","doi":"10.3410/f.718246738.793496702","title":"Faculty Opinions recommendation of Quorum sensing controls hyphal initiation in Candida albicans through Ubr1-mediated protein degradation.","year":2014,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Quorum sensing; Candida albicans; Microbiology; Degradation (telecommunications); Chemistry; Computational biology; Biology; Biochemistry; Computer science; Virulence; Gene","score_opus":0.03425865716240535,"score_gpt":0.3518714535357576,"score_spread":0.31761279637335227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232935260","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000025527024,0.0006815286,0.00023849192,0.14744332,0.00039708504,0.002952603,0.84812003,0.00003854188,0.00010285504],"genre_scores_gemma":[0.00063321524,0.00023959346,0.0009599621,0.005531429,0.0002683232,0.00017490427,0.99149144,0.000034180215,0.00066694117],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9936599,0.00087092776,0.0024253773,0.00082501327,0.0017294658,0.0004893099],"domain_scores_gemma":[0.9902604,0.00034381892,0.0019654874,0.0014471796,0.00569684,0.00028626487],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0021205454,0.0005939021,0.0015823927,0.00040536208,0.00020568006,0.00008579819,0.0006648307,0.0009188129,0.00033111824],"category_scores_gemma":[0.01877055,0.00040455008,0.0005948085,0.0022495133,0.0004459589,0.0004440259,0.0002028682,0.0014186024,0.000038364225],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000103151244,0.00044793705,0.00011188617,0.008645997,0.000121059806,9.993116e-7,0.00012360356,1.03924656e-7,0.000031828564,0.00021554498,0.98885065,0.0013472087],"study_design_scores_gemma":[0.002014696,0.00022355551,0.009256166,0.020572001,0.00022913405,0.00002575826,0.00006276788,0.000049165243,0.000048832633,0.000037469563,0.9671473,0.00033313566],"about_ca_topic_score_codex":0.0004479212,"about_ca_topic_score_gemma":0.00022287281,"teacher_disagreement_score":0.14337142,"about_ca_system_score_codex":0.00034204393,"about_ca_system_score_gemma":0.0012242508,"threshold_uncertainty_score":0.9998406},"labels":[],"label_agreement":null},{"id":"W4233488704","doi":"10.21203/rs.3.rs-279551/v2","title":"The network interplay of interferon and toll-like receptor signaling pathways in the anti-Candida immune response","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Toll-like receptor; Immune system; Signal transduction; Interferon; Toll; Immunology; Biology; Receptor; Innate immune system; Microbiology; Cell biology; Genetics","score_opus":0.04952235510037853,"score_gpt":0.3773562979922077,"score_spread":0.3278339428918292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233488704","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98030496,0.015941171,0.000063141495,0.0017726754,0.0002504426,0.0012974209,0.000034915913,0.000016112595,0.0003191638],"genre_scores_gemma":[0.99528897,0.0038081987,0.00008833266,0.00005768174,0.00019692544,0.000087790104,0.00006779512,0.000031701096,0.0003726003],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9932264,0.003521103,0.000742679,0.00063214236,0.0011629346,0.0007147545],"domain_scores_gemma":[0.99350756,0.004235121,0.00015646683,0.0013934409,0.00058746245,0.00011993983],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.01452231,0.00026334665,0.0006973125,0.00013848154,0.00033243734,0.00020053287,0.00058717973,0.00032590167,0.000113048896],"category_scores_gemma":[0.0026960042,0.00015264585,0.0002493268,0.000545009,0.00065381883,0.000053664593,0.0011246916,0.0028171546,0.0000064722262],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.10322588,0.0019775662,0.39877498,0.013227107,0.0011101575,0.0017978471,0.06718058,0.00043500695,0.3652065,0.0010867586,0.01545321,0.03052438],"study_design_scores_gemma":[0.002933184,0.0037288787,0.81820256,0.030414458,0.000117581134,0.00006023575,0.12308338,0.0011250145,0.011680093,0.001197868,0.0067204386,0.00073629513],"about_ca_topic_score_codex":0.00029790978,"about_ca_topic_score_gemma":0.0004587289,"teacher_disagreement_score":0.41942757,"about_ca_system_score_codex":0.0002397619,"about_ca_system_score_gemma":0.00088682486,"threshold_uncertainty_score":0.9994834},"labels":[],"label_agreement":null},{"id":"W4233525640","doi":"10.1345/1542-6270(2002)036<0046:abdaai>2.0.co;2","title":"Amphotericin B Disposition After Aerosol Inhalation in Lung Transplant Recipients","year":2002,"lang":"en","type":"article","venue":"Annals of Pharmacotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; Vancouver Hospital and Health Sciences Centre; University of British Columbia","funders":"","keywords":"Amphotericin B; Medicine; Bronchoalveolar lavage; Inhalation; Lung; Adverse effect; Pharmacokinetics; Gastroenterology; Lung transplantation; Fluconazole; Internal medicine; Pharmacology; Anesthesia; Surgery; Antifungal; Dermatology","score_opus":0.05251576809772192,"score_gpt":0.3541771552780223,"score_spread":0.3016613871803004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233525640","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996341,0.0015211649,0.00022489607,0.0009421481,0.00007098428,0.00030196112,0.000022307237,0.000018233308,0.0005573349],"genre_scores_gemma":[0.99370456,0.004052223,0.00006129136,0.0017419152,0.000056754514,0.00002068194,0.000015201858,0.00001416944,0.0003332286],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990408,0.000054691438,0.00030672085,0.00019056191,0.00021487329,0.00019236469],"domain_scores_gemma":[0.999636,0.000023983152,0.000065124965,0.00014026636,0.00006491945,0.000069727124],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017080038,0.000111430665,0.00022138393,0.00009819585,0.000018717907,0.0000053734243,0.000044563076,0.000056913013,0.0014351526],"category_scores_gemma":[0.000005369451,0.000097793636,0.0001011389,0.00019375511,0.000042008618,0.00014288402,0.0000028755928,0.00010949867,0.000017085898],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019726004,0.0005175077,0.42301437,0.00009071729,0.000036518155,0.00003635739,0.0013537369,0.000005386989,0.5634494,0.000004787706,0.00095423695,0.008564399],"study_design_scores_gemma":[0.0019836442,0.00020315354,0.57372904,0.00031308524,0.000023549901,0.000004242127,0.000016598357,0.0019453394,0.42136666,0.000020070413,0.00026943974,0.00012518745],"about_ca_topic_score_codex":0.000034085417,"about_ca_topic_score_gemma":0.000018380879,"teacher_disagreement_score":0.15071467,"about_ca_system_score_codex":0.000022487835,"about_ca_system_score_gemma":0.000008201673,"threshold_uncertainty_score":0.9994777},"labels":[],"label_agreement":null},{"id":"W4234083326","doi":"10.3410/f.727157720.793531362","title":"Faculty Opinions recommendation of Aspergillus fumigatus CalA binds to integrin α5β1 and mediates host cell invasion.","year":2017,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Aspergillus fumigatus; Host (biology); Integrin; Aspergillus; Microbiology; Chemistry; Cell; Cell biology; Biology; Ecology; Biochemistry","score_opus":0.035851987176300386,"score_gpt":0.3672804095404106,"score_spread":0.3314284223641102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234083326","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000030774798,0.0019591062,0.000014272854,0.15837494,0.0007156118,0.0016771259,0.8370589,0.000028905657,0.00014035875],"genre_scores_gemma":[0.00029140874,0.0015502144,0.00059561286,0.004640958,0.00031898898,0.00015442265,0.99005014,0.00003295676,0.0023653274],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9950409,0.00034099896,0.0016501524,0.00094528124,0.0015785507,0.00044412183],"domain_scores_gemma":[0.9898188,0.00023594723,0.001381852,0.0023075568,0.005512086,0.00074373255],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001751557,0.0006319968,0.0015117382,0.0004191645,0.0003524746,0.00014521046,0.0012741445,0.0009495279,0.00042636492],"category_scores_gemma":[0.016724383,0.00038593306,0.0006020494,0.0011250568,0.0006310379,0.0003047464,0.00076096493,0.0014697291,0.00008424081],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006403912,0.00043843212,0.00018196383,0.011113367,0.000105672654,0.0000011572602,0.00017495654,9.088532e-9,0.000025710227,0.00005514755,0.9856737,0.0021658114],"study_design_scores_gemma":[0.00089889864,0.0003326887,0.026130034,0.015933292,0.00030770333,0.000029664596,0.00008374475,0.0000025105157,0.00010957884,0.000010710986,0.9558224,0.00033874248],"about_ca_topic_score_codex":0.0001516209,"about_ca_topic_score_gemma":0.00005844562,"teacher_disagreement_score":0.15373397,"about_ca_system_score_codex":0.00016324928,"about_ca_system_score_gemma":0.00088515994,"threshold_uncertainty_score":0.9998593},"labels":[],"label_agreement":null},{"id":"W4234728597","doi":"10.3410/f.725245312.793520436","title":"Faculty Opinions recommendation of Unraveling the biology of a fungal meningitis pathogen using chemical genetics.","year":2016,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Biology; Fungal pathogen; Computational biology; Pathogen; Genetics; Evolutionary biology","score_opus":0.04967414402829204,"score_gpt":0.3826327860103901,"score_spread":0.332958641982098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234728597","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00004379705,0.0029364075,0.0001614693,0.06336682,0.0004587826,0.0012423439,0.93174076,0.000016535252,0.000033109125],"genre_scores_gemma":[0.00042573182,0.00077505165,0.0009793717,0.0012526767,0.00035429135,0.00006173312,0.9959334,0.000025016298,0.00019270254],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99550307,0.00049073226,0.0019051059,0.00063817453,0.0010626917,0.0004002295],"domain_scores_gemma":[0.99061525,0.00028096297,0.0017004326,0.0016015182,0.0055554314,0.00024641198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018818987,0.0004481848,0.0012334615,0.000216355,0.00016504712,0.000031218853,0.0010515276,0.0007875246,0.0003577056],"category_scores_gemma":[0.008295816,0.00022711926,0.00079442636,0.0011711565,0.00084223703,0.00011075518,0.00045418463,0.00086424814,0.000009309304],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048850387,0.00024998252,0.000120990124,0.0056887018,0.00020865344,3.4442527e-7,0.000082972365,2.5641247e-8,0.0006757786,0.00019255122,0.9898146,0.0029165784],"study_design_scores_gemma":[0.00069940847,0.00014855797,0.0014940065,0.012624676,0.0004194422,0.00005531395,0.000036399237,0.000016134978,0.00053776224,0.00004094401,0.98371303,0.00021435216],"about_ca_topic_score_codex":0.00004552449,"about_ca_topic_score_gemma":0.0000036327765,"teacher_disagreement_score":0.06419269,"about_ca_system_score_codex":0.00014538034,"about_ca_system_score_gemma":0.00090310996,"threshold_uncertainty_score":0.9931466},"labels":[],"label_agreement":null},{"id":"W4234766036","doi":"10.14740/jmc2337w","title":"Esophageal Candidiasis in a Patient With Uncontrolled Diabetes Mellitus and Recurrent Abdominal Pain, Symptomatic Or Incidental? A Case Report and Brief Literature Review","year":2015,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Esophagogastroduodenoscopy; Diabetes mellitus; Asymptomatic; Esophageal candidiasis; Abdominal pain; Epigastric pain; Past medical history; Fluconazole; Medical history; Internal medicine; Surgery; Human immunodeficiency virus (HIV); Dermatology; Endoscopy; Antifungal; Immunology","score_opus":0.01665978892220611,"score_gpt":0.29900308583877755,"score_spread":0.28234329691657145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234766036","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77460676,0.22282827,0.00001422947,0.0021669206,0.00005754438,0.00030709713,0.000004706187,0.0000043231094,0.000010118931],"genre_scores_gemma":[0.97741216,0.02044004,0.00029997734,0.001676692,0.00012672719,0.000010997787,0.0000054436123,0.000010031532,0.000017920653],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99710685,0.00035605975,0.0009520368,0.00020774109,0.0011545412,0.00022278402],"domain_scores_gemma":[0.9974485,0.00073042896,0.00042762316,0.00016516185,0.00035360781,0.0008746562],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0037842558,0.00018284262,0.0009244925,0.00011818019,0.000038883754,0.000041274714,0.000051983832,0.000110992056,0.00005241356],"category_scores_gemma":[0.013025396,0.00009565734,0.00008323481,0.00024896814,0.00017697748,0.00015879427,0.000037212405,0.0004830635,2.3293784e-7],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029706485,0.00027332932,0.06341017,0.0024496096,0.00008474098,0.868006,0.00069396896,8.071634e-8,0.0000024934275,0.0000017001257,0.0030167315,0.05909052],"study_design_scores_gemma":[0.007899145,0.006809811,0.008857239,0.040076036,0.0005403386,0.9325779,0.0020928653,0.00018889798,0.00002408148,0.000025317802,0.0007345268,0.00017383821],"about_ca_topic_score_codex":0.00007059143,"about_ca_topic_score_gemma":0.00076582545,"teacher_disagreement_score":0.20280538,"about_ca_system_score_codex":0.00012977117,"about_ca_system_score_gemma":0.0007381715,"threshold_uncertainty_score":0.9952883},"labels":[],"label_agreement":null},{"id":"W4235601286","doi":"10.3410/f.4769957.4669055","title":"Faculty Opinions recommendation of Histone acetyltransferase Rtt109 is required for Candida albicans pathogenesis.","year":2010,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Concordia University","funders":"","keywords":"Candida albicans; Histone acetyltransferase; Pathogenesis; Acetyltransferase; Histone; Microbiology; Medicine; Biology; Acetylation; Genetics; Internal medicine; Gene","score_opus":0.03879339619673157,"score_gpt":0.3966916359979758,"score_spread":0.35789823980124424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235601286","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000062030867,0.0012789471,0.000130245,0.21963614,0.0007648471,0.0027218582,0.7753858,0.000035543577,0.00004041473],"genre_scores_gemma":[0.000038270126,0.00085068936,0.0012600987,0.009833411,0.0004240762,0.0004865077,0.98427546,0.00004770082,0.0027837746],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9944104,0.00029718847,0.0021647718,0.001008507,0.0016058112,0.0005133039],"domain_scores_gemma":[0.9874234,0.00025035653,0.001310123,0.0023177562,0.008162096,0.0005362611],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0018445393,0.00067755615,0.0017192783,0.00033950264,0.0003201063,0.00006562703,0.0011477997,0.0012695615,0.0011396428],"category_scores_gemma":[0.008990579,0.00044505292,0.0013722462,0.0015488684,0.00065850717,0.0002601903,0.00019238127,0.0013224785,0.000027078097],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015210563,0.000699413,0.000028440441,0.016976612,0.00021429209,5.1257297e-7,0.00014914054,8.136957e-9,0.00009758787,0.00011944183,0.97893244,0.0026299793],"study_design_scores_gemma":[0.0016259565,0.00032855853,0.003274118,0.009124289,0.0007230679,0.000032393287,0.000039164093,0.000004868078,0.00016686258,0.000021474423,0.98426807,0.00039119477],"about_ca_topic_score_codex":0.0001918184,"about_ca_topic_score_gemma":0.000108081236,"teacher_disagreement_score":0.20980273,"about_ca_system_score_codex":0.0002262169,"about_ca_system_score_gemma":0.001501891,"threshold_uncertainty_score":0.99980015},"labels":[],"label_agreement":null},{"id":"W4236081761","doi":"10.1503/cmaj.190433","title":"<i>Candida auris</i>","year":2019,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta","funders":"","keywords":"Candida auris; Medicine; Dermatology; Antifungal","score_opus":0.004349418904721993,"score_gpt":0.23174759969998854,"score_spread":0.22739818079526655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236081761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9116734,0.00020153943,0.000032219974,0.027607739,0.00085964665,0.00012982021,0.000008716161,0.000017502622,0.05946938],"genre_scores_gemma":[0.96802413,0.00008714165,0.000052188505,0.019742884,0.00090550544,0.0000010974442,0.0000061226565,0.000010105759,0.011170831],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979051,0.00006331575,0.00028319808,0.000130892,0.0012180465,0.00039947126],"domain_scores_gemma":[0.997691,0.00008244461,0.000096120486,0.00012244601,0.00029634425,0.0017116488],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0011995265,0.000080073725,0.00021959002,0.00009085667,0.00011262936,0.000039218576,0.000097559,0.0002876373,0.01982693],"category_scores_gemma":[0.00110211,0.000066994275,0.0001222966,0.00015892342,0.000021138834,0.00008048483,0.000006582129,0.00083823776,0.0017232313],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017755776,0.000017179327,0.84291893,0.000010609574,0.000046579076,0.0002470311,0.000059498263,2.2296922e-7,0.00006170463,0.00013785897,0.14913031,0.0073523195],"study_design_scores_gemma":[0.0009956843,0.00007568178,0.41201797,0.00007293113,0.000020219053,0.00024445698,0.00022291295,0.000051151026,0.000028850278,0.00010531177,0.58608097,0.00008387033],"about_ca_topic_score_codex":0.0010141799,"about_ca_topic_score_gemma":0.012336191,"teacher_disagreement_score":0.43695065,"about_ca_system_score_codex":0.0009820772,"about_ca_system_score_gemma":0.0039429953,"threshold_uncertainty_score":0.999054},"labels":[],"label_agreement":null},{"id":"W4236238860","doi":"10.3410/f.730925267.793538121","title":"Faculty Opinions recommendation of Sterilizing immunity in the lung relies on targeting fungal apoptosis-like programmed cell death.","year":2017,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Deutsche Forschungsgemeinschaft; University of Cincinnati; National Institutes of Health; Memorial Sloan-Kettering Cancer Center; Ohio State University","keywords":"Aspergillus fumigatus; Apoptosis; Aspergillosis; Programmed cell death; Biology; DNA fragmentation; Immune system; Microbiology; Efferocytosis; Immunity; Immunology; Cell biology; Macrophage; In vitro; Biochemistry","score_opus":0.04647171064481899,"score_gpt":0.3849250531677223,"score_spread":0.3384533425229033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236238860","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007684304,0.0020820943,0.000008712377,0.080797106,0.0006640475,0.002653286,0.9135282,0.000030325817,0.00015939664],"genre_scores_gemma":[0.00095782237,0.000882185,0.00044334008,0.0035572685,0.00026020853,0.00031240657,0.9929714,0.000029354474,0.00058596936],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9940575,0.0010129553,0.0018631987,0.00074669695,0.0018083715,0.0005113219],"domain_scores_gemma":[0.99126333,0.00036533867,0.0019486212,0.002649712,0.003544942,0.00022805456],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.003998341,0.000604083,0.001269257,0.00031526736,0.00055464095,0.0002015655,0.0018912529,0.0007505674,0.0001328681],"category_scores_gemma":[0.010951524,0.0003367903,0.0007882521,0.001112403,0.0004629744,0.00031907248,0.00043380153,0.0022645784,0.00002564152],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011858737,0.00095525914,0.00032031536,0.0136457505,0.00008574389,8.026577e-7,0.0003431863,4.0038444e-8,0.000007689595,0.00006298127,0.9835433,0.0009163822],"study_design_scores_gemma":[0.0010467358,0.0002503944,0.024779228,0.017563988,0.00025586228,0.000013671548,0.0002745734,0.000009005686,0.000036101566,0.0000071482127,0.95547986,0.00028343173],"about_ca_topic_score_codex":0.00018092322,"about_ca_topic_score_gemma":0.000022186196,"teacher_disagreement_score":0.07944325,"about_ca_system_score_codex":0.00020913631,"about_ca_system_score_gemma":0.00064398954,"threshold_uncertainty_score":0.9999084},"labels":[],"label_agreement":null},{"id":"W4236934146","doi":"10.3410/f.718302569.793498959","title":"Faculty Opinions recommendation of A 5' UTR-mediated translational efficiency mechanism inhibits the Candida albicans morphological transition.","year":2014,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Candida albicans; Mechanism (biology); Transition (genetics); Translation (biology); Chemistry; Microbiology; Computational biology; Biology; Biochemistry; Messenger RNA; Physics; Gene","score_opus":0.028680636684319638,"score_gpt":0.3362297818882081,"score_spread":0.3075491452038885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236934146","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000010127585,0.0005772161,0.00056360546,0.24668391,0.00040864147,0.0017753139,0.74987775,0.000037206715,0.000066207685],"genre_scores_gemma":[0.0008416926,0.00032209133,0.0003152325,0.0101540685,0.00029749988,0.00022308888,0.98732764,0.000026165206,0.00049252337],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9938543,0.0007480305,0.0019525831,0.0008238601,0.0021727332,0.00044853406],"domain_scores_gemma":[0.99159527,0.00043398794,0.0011614698,0.0014492554,0.0049866713,0.00037332062],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0023688695,0.0005878922,0.0012672876,0.00027493972,0.00038496722,0.00006995924,0.0010734701,0.00092445593,0.00140007],"category_scores_gemma":[0.0065714633,0.00031239202,0.0009831415,0.0020933307,0.0007916683,0.00018679781,0.00014535587,0.0015670881,0.000054558295],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007610042,0.0006585951,0.000009166366,0.0043269256,0.00013731251,8.6387035e-7,0.0002010489,2.358749e-7,0.000017862008,0.00068262866,0.9934026,0.00048664818],"study_design_scores_gemma":[0.0012479878,0.0003053777,0.003266933,0.0068109767,0.00040742545,0.00008838799,0.000056106215,0.000065078,0.000032064418,0.00008628927,0.9873365,0.00029687842],"about_ca_topic_score_codex":0.00008766991,"about_ca_topic_score_gemma":0.00003250478,"teacher_disagreement_score":0.23744985,"about_ca_system_score_codex":0.00012096716,"about_ca_system_score_gemma":0.0009484158,"threshold_uncertainty_score":0.9999328},"labels":[],"label_agreement":null},{"id":"W4237436391","doi":"10.3410/f.13132966.14460067","title":"Faculty Opinions recommendation of Cross-species discovery of syncretic drug combinations that potentiate the antifungal fluconazole.","year":2011,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Concordia University","funders":"","keywords":"Fluconazole; Antifungal; Antifungal drug; Drug; Drug discovery; Computational biology; Pharmacology; Medicine; Biology; Bioinformatics; Microbiology","score_opus":0.04763277425724057,"score_gpt":0.3591894060296659,"score_spread":0.3115566317724254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237436391","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005157485,0.002158068,0.00006325557,0.07777558,0.0008841844,0.0018172398,0.91698796,0.00002764591,0.00023448789],"genre_scores_gemma":[0.0028670055,0.0012508425,0.00013671168,0.0016897084,0.00015919613,0.00012125355,0.9872325,0.000030157691,0.006512612],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.994343,0.0005524109,0.0020549814,0.0007066806,0.0019382092,0.00040473355],"domain_scores_gemma":[0.9875357,0.00031449483,0.0022106552,0.0022854765,0.0074278745,0.00022580173],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001939627,0.0005722753,0.001400781,0.0003122587,0.00037044042,0.00019216725,0.0015759914,0.0005690806,0.0005165677],"category_scores_gemma":[0.006880338,0.00031415306,0.0011957667,0.0016231333,0.001686845,0.0006767407,0.0005433678,0.001290268,0.00002376588],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006684124,0.0008146848,0.00048696517,0.0105889775,0.00028451887,4.795473e-7,0.00017665022,2.991153e-8,0.000013677298,0.0019995053,0.98529774,0.00026990182],"study_design_scores_gemma":[0.0009141456,0.00012692447,0.08587449,0.010777796,0.0005113224,0.00002549083,0.00013699602,0.000004043737,0.0001902241,0.00007655802,0.9011085,0.00025348784],"about_ca_topic_score_codex":0.00009610728,"about_ca_topic_score_gemma":0.000019592815,"teacher_disagreement_score":0.08538753,"about_ca_system_score_codex":0.00011817726,"about_ca_system_score_gemma":0.00076813664,"threshold_uncertainty_score":0.99993104},"labels":[],"label_agreement":null},{"id":"W4237494875","doi":"10.3410/f.726253922.793516530","title":"Faculty Opinions recommendation of Candida glabrata Binding to Candida albicans Hyphae Enables Its Development in Oropharyngeal Candidiasis.","year":2016,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Candida albicans; Candida glabrata; Hypha; Microbiology; Invasive candidiasis; Vulvovaginal Candidiasis; Antifungal; Biology; Fluconazole","score_opus":0.037895775230494325,"score_gpt":0.35883727658388903,"score_spread":0.3209415013533947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237494875","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010744067,0.0011453134,0.00001409082,0.1139304,0.0006314115,0.0022435552,0.8818195,0.000028338934,0.00007998665],"genre_scores_gemma":[0.00025409853,0.00062822335,0.00042891316,0.004047435,0.00024732144,0.00035148676,0.99136317,0.000036626767,0.0026427116],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99401045,0.00032773113,0.0022479612,0.0009989623,0.0017683185,0.00064660417],"domain_scores_gemma":[0.9923497,0.00021070403,0.0011267673,0.0014669136,0.004178909,0.0006669945],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0018628241,0.00066337286,0.0016394783,0.00071409205,0.0002490712,0.00009014333,0.0011708357,0.00069532107,0.00108741],"category_scores_gemma":[0.008752694,0.0004009615,0.00045356926,0.002576311,0.00025281875,0.0003788554,0.0004959534,0.0009605428,0.00007636401],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010451496,0.0004138853,0.00027302105,0.008855143,0.00015781818,0.000002571459,0.00024807916,2.7859475e-8,0.000027589762,0.00006050271,0.9863337,0.0035231085],"study_design_scores_gemma":[0.0012599739,0.00016963208,0.013332761,0.02446448,0.00015731622,0.000025675805,0.00006994178,0.0000010861888,0.00018566531,0.000003006614,0.95993793,0.0003925093],"about_ca_topic_score_codex":0.00045515576,"about_ca_topic_score_gemma":0.0007103701,"teacher_disagreement_score":0.109882966,"about_ca_system_score_codex":0.0007255918,"about_ca_system_score_gemma":0.0027789942,"threshold_uncertainty_score":0.99984425},"labels":[],"label_agreement":null},{"id":"W4237839241","doi":"10.3410/f.733017981.793548595","title":"Faculty Opinions recommendation of Functional diversification accompanies gene family expansion of MED2 homologs in Candida albicans.","year":2018,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Diversification (marketing strategy); Candida albicans; Gene family; Gene; Genetics; Biology; Computational biology; Genealogy; Genome; Business; History; Marketing","score_opus":0.049180140771474284,"score_gpt":0.3504545285075368,"score_spread":0.3012743877360625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237839241","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019285607,0.0010636854,0.000056666646,0.04179132,0.0006958275,0.0014026344,0.95472884,0.000021032969,0.0000471546],"genre_scores_gemma":[0.00094465696,0.0007889293,0.00044462422,0.0018080231,0.00021980314,0.000108933105,0.99507326,0.00001915396,0.00059263885],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9949593,0.00041825927,0.0019292927,0.00072752475,0.0016501996,0.00031545805],"domain_scores_gemma":[0.9897456,0.00018437447,0.001620652,0.0014825462,0.0067389463,0.0002278353],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016110383,0.00044579708,0.0012629495,0.00051533565,0.00015432223,0.000030159656,0.0008012726,0.0007255457,0.0005506997],"category_scores_gemma":[0.0052069277,0.0002984141,0.0005834766,0.0019986324,0.0007463737,0.0002773416,0.00031156544,0.0008342957,0.000019590698],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014411552,0.0005745114,0.00041452964,0.0067376476,0.00013057377,3.8330015e-7,0.00014472353,1.0696246e-7,0.000086513544,0.00008388035,0.9908737,0.0008092932],"study_design_scores_gemma":[0.0009701765,0.00023202937,0.13658383,0.008434851,0.00022488386,0.000014226907,0.000107138316,0.000009001899,0.000111555186,0.000020229618,0.85308594,0.00020611701],"about_ca_topic_score_codex":0.00037830454,"about_ca_topic_score_gemma":0.000049274597,"teacher_disagreement_score":0.13778776,"about_ca_system_score_codex":0.00023775865,"about_ca_system_score_gemma":0.0009773921,"threshold_uncertainty_score":0.9999468},"labels":[],"label_agreement":null},{"id":"W4238130730","doi":"10.1016/b978-1-4160-6110-6.10078-2","title":"Case 78","year":2010,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Computer science","score_opus":0.023201546623902416,"score_gpt":0.27197240425228303,"score_spread":0.2487708576283806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238130730","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023946038,0.00067892676,0.0000027463516,0.000084179585,0.00036880953,0.0006018506,0.00003973224,0.00009229801,0.99573684],"genre_scores_gemma":[0.023936018,0.00005855236,0.00054884056,0.000685515,0.0006788966,0.000011586088,0.000028667811,0.00009223962,0.9739597],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99843395,0.000010484577,0.00040791123,0.0005194131,0.00034159512,0.00028663868],"domain_scores_gemma":[0.998344,0.000053714994,0.00014399561,0.0010102385,0.00017140809,0.00027664765],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002307166,0.00038492092,0.00069216685,0.00009582999,0.00012319167,0.000020250702,0.00010345635,0.0006998788,0.002110976],"category_scores_gemma":[0.000054375985,0.0003206258,0.00040587396,0.0000069871307,0.0002947874,0.000019670286,0.00006850465,0.0013310331,0.0008129881],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009210538,0.000015422049,0.00009771533,0.00026813633,0.00010243425,0.013780452,0.00010017232,2.5855418e-9,0.00052243733,0.0028131162,0.00024294769,0.98196507],"study_design_scores_gemma":[0.00037548598,0.00011152333,0.00007874182,0.0003239367,0.00032083338,0.0036759044,0.000009381338,5.905666e-7,0.0002040602,0.0037808612,0.990808,0.00031067253],"about_ca_topic_score_codex":9.529567e-7,"about_ca_topic_score_gemma":0.00019511928,"teacher_disagreement_score":0.99056506,"about_ca_system_score_codex":0.00007338931,"about_ca_system_score_gemma":0.00025629863,"threshold_uncertainty_score":0.999965},"labels":[],"label_agreement":null},{"id":"W4238622424","doi":"10.3410/f.726445866.793524499","title":"Faculty Opinions recommendation of Candida albicans Gene Deletion with a Transient CRISPR-Cas9 System.","year":2016,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"CRISPR; Candida albicans; Gene; Transient (computer programming); Biology; Genetics; Genome editing; Computational biology; Computer science; Programming language","score_opus":0.024997946576549565,"score_gpt":0.3389496681800568,"score_spread":0.3139517216035072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238622424","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000007638926,0.0009696828,0.0003785648,0.13044055,0.00047696359,0.0021803332,0.86538476,0.00004873717,0.00011280231],"genre_scores_gemma":[0.00024264588,0.00048677757,0.0004915607,0.0024807288,0.0003190463,0.00028225643,0.99439603,0.00003703085,0.0012639065],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99447954,0.00036544233,0.0018224223,0.00087703863,0.0020015752,0.00045400497],"domain_scores_gemma":[0.9886717,0.00013291274,0.0014535935,0.0018724696,0.007403855,0.00046544775],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001414763,0.00061330164,0.0014605972,0.00033912165,0.00024045675,0.000062625935,0.0008213218,0.00072883663,0.00050568394],"category_scores_gemma":[0.0025505223,0.0003200513,0.0007274128,0.0015889539,0.00051919237,0.00024878664,0.00014709569,0.00091045623,0.00003531439],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016102647,0.00043725842,0.000040143274,0.019487558,0.0002654318,0.0000016253059,0.000090456124,3.0787312e-8,0.000015171482,0.00018124822,0.97810286,0.0012171946],"study_design_scores_gemma":[0.0014378285,0.0004117014,0.005118971,0.03378239,0.0006286329,0.00012340095,0.00007721275,0.000004589348,0.000052402116,0.0000027281787,0.9580377,0.00032244105],"about_ca_topic_score_codex":0.00017279471,"about_ca_topic_score_gemma":0.0000544425,"teacher_disagreement_score":0.12901132,"about_ca_system_score_codex":0.00038893335,"about_ca_system_score_gemma":0.0012136293,"threshold_uncertainty_score":0.99992514},"labels":[],"label_agreement":null},{"id":"W4238830887","doi":"10.1097/00019048-200105000-00001","title":"IDCP SNAPSHOTS","year":2001,"lang":"en","type":"article","venue":"Infectious Diseases in Clinical Practice","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Asymptomatic; Titer; Vomiting; Whooping cough; Antibody titer; Antibody; Pediatrics; Bordetella pertussis; Internal medicine; Gastroenterology; Immunology; Vaccination","score_opus":0.04847977065978616,"score_gpt":0.453363804352148,"score_spread":0.40488403369236187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238830887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86846673,0.0008608708,0.00030968277,0.0021581242,0.0005835268,0.00037047177,0.000005823012,0.00014843022,0.12709634],"genre_scores_gemma":[0.9915167,0.0016485883,0.00013722884,0.0055757426,0.00049135654,0.00001853683,0.000012915831,0.0000195743,0.00057933974],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977367,0.00034502975,0.0007857175,0.0004678971,0.00035537226,0.00030926295],"domain_scores_gemma":[0.99475473,0.0039024963,0.00018563552,0.0005751574,0.00022917143,0.00035277978],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0010773746,0.00015256485,0.000415039,0.00007643514,0.00007333138,0.000030999927,0.00008896768,0.0001768057,0.0005915505],"category_scores_gemma":[0.0333008,0.00013545857,0.00026918965,0.00039983445,0.00020889856,0.000391937,0.0000544578,0.0006547253,0.00040180053],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015229929,0.0032166818,0.967719,0.000039060607,0.00005797692,0.0009891117,0.000016452577,0.0000066889643,0.000009107449,0.0003834996,0.0021283433,0.023911083],"study_design_scores_gemma":[0.0018837315,0.00051182247,0.9271592,0.0000622924,0.00022500407,0.00015047664,0.000106576146,0.00008395473,0.0000020482532,0.0012558844,0.06841573,0.00014331799],"about_ca_topic_score_codex":0.00010627409,"about_ca_topic_score_gemma":0.00013801851,"teacher_disagreement_score":0.126517,"about_ca_system_score_codex":0.00011877086,"about_ca_system_score_gemma":0.0002598799,"threshold_uncertainty_score":0.97484213},"labels":[],"label_agreement":null},{"id":"W4240848120","doi":"10.1302/0301-620x.83b2.0830183","title":"Fluconazole-impregnated beads in the management of fungal infection of prosthetic joints","year":2001,"lang":"en","type":"article","venue":"Journal of Bone and Joint Surgery - British Volume","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Society of Microbiologists","funders":"","keywords":"Fluconazole; Antifungal; Medicine; Mycosis; Microbiology; Surgery; Dermatology; Biology","score_opus":0.021653460682421626,"score_gpt":0.24857215331823104,"score_spread":0.2269186926358094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240848120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99542165,0.0030074215,0.000059433685,0.00038608332,0.0001093139,0.00020248175,0.0000047408917,0.0000045297465,0.0008043368],"genre_scores_gemma":[0.9932991,0.0060820673,0.00009847299,0.000087530905,0.00004020328,0.0000026478278,0.0000034158866,0.000009383272,0.00037716638],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979891,0.00010130566,0.001160004,0.00012640565,0.0004336966,0.00018948894],"domain_scores_gemma":[0.9989245,0.00006285996,0.0005361523,0.00015569813,0.00024796373,0.00007281919],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018392948,0.00009998059,0.00071014254,0.00022314214,0.00003693159,0.000019001498,0.00002707698,0.00007321455,0.00010329754],"category_scores_gemma":[0.00010403238,0.00008510812,0.00028640812,0.00032012278,0.00013468725,0.00016708657,0.000023500997,0.00025175212,0.0000015932135],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041258617,0.00058454537,0.9455556,0.0006619278,0.000106533014,0.001710043,0.00014718689,0.000002319697,0.002112949,0.000014991155,0.0019714413,0.04671985],"study_design_scores_gemma":[0.00084916776,0.00026520903,0.99174935,0.0027325966,0.00011627169,0.0028005838,0.00026224088,0.000038080434,0.0003302985,0.000100284065,0.00068155513,0.000074380376],"about_ca_topic_score_codex":0.00040944497,"about_ca_topic_score_gemma":0.00013810556,"teacher_disagreement_score":0.046645466,"about_ca_system_score_codex":0.000049455866,"about_ca_system_score_gemma":0.000069680704,"threshold_uncertainty_score":0.34706083},"labels":[],"label_agreement":null},{"id":"W4241115520","doi":"10.3410/f.734605464.793556591","title":"Faculty Opinions recommendation of Single human B cell-derived monoclonal anti-Candida antibodies enhance phagocytosis and protect against disseminated candidiasis.","year":2019,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Fundação para a Ciência e a Tecnologia; Biotechnology and Biological Sciences Research Council; Medical Research Council; Medical Research Council Centre for Medical Mycology; University of Aberdeen; International Seafood Sustainability Foundation; Wellcome Trust; Pfizer","keywords":"Monoclonal antibody; Phagocytosis; Microbiology; Antibody; Immunology; Medicine; Biology","score_opus":0.034646174240675315,"score_gpt":0.36178597438927956,"score_spread":0.3271398001486042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241115520","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001168003,0.0024359457,0.00001600917,0.029258037,0.00033282704,0.0025832916,0.96408504,0.000036361827,0.00008450051],"genre_scores_gemma":[0.0053408863,0.0012623103,0.0002681422,0.0014342814,0.0001458853,0.00012825671,0.99029905,0.000033638615,0.0010875564],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9954796,0.00036831351,0.0015819316,0.0009056914,0.0012385484,0.0004259071],"domain_scores_gemma":[0.9924979,0.00018268274,0.0015719044,0.0013367471,0.004086207,0.0003245433],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001013602,0.00062458374,0.0015625609,0.00031493822,0.00031843546,0.000121306315,0.00070183823,0.000712805,0.00015293923],"category_scores_gemma":[0.0044873687,0.00040922413,0.0005755234,0.001263092,0.0005958474,0.00033052848,0.0003425739,0.0010345737,0.000017302482],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038535825,0.000739973,0.0002129681,0.019524315,0.00017797839,7.865527e-7,0.00020127799,3.1418388e-8,0.0016414151,0.000008993393,0.97662336,0.0008303436],"study_design_scores_gemma":[0.00094820565,0.00032383107,0.019893818,0.017518912,0.00033680772,0.000015384187,0.00012791995,0.000004842685,0.0034118681,0.000003680833,0.95710593,0.00030882418],"about_ca_topic_score_codex":0.000082419836,"about_ca_topic_score_gemma":0.000015068135,"teacher_disagreement_score":0.027823756,"about_ca_system_score_codex":0.0001620274,"about_ca_system_score_gemma":0.0004963761,"threshold_uncertainty_score":0.99983597},"labels":[],"label_agreement":null},{"id":"W4241222948","doi":"10.1016/s0738-081x(00)00145-0","title":"Oral candidosis:","year":2000,"lang":"en","type":"review","venue":"Clinics in Dermatology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Thomas Hospital","funders":"","keywords":"Chlorhexidine; Candida albicans; Cochrane Library; Dentistry; Chlorine dioxide; Medicine; MEDLINE; Microbiology; Randomized controlled trial; Surgery; Chemistry; Biology","score_opus":0.09613920339064158,"score_gpt":0.4479407781889641,"score_spread":0.3518015747983225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241222948","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002339576,0.9920212,0.000003476412,0.00010393242,0.00035574005,0.0005939156,0.000019872725,0.000046047382,0.0066218367],"genre_scores_gemma":[0.00034656288,0.9975179,0.00013093,0.00049593736,0.00008681806,0.000063024454,0.00013600968,0.00004379046,0.0011790713],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972483,0.00029280485,0.0013354119,0.0005518495,0.00014301775,0.0004286262],"domain_scores_gemma":[0.9983804,0.00047946486,0.00021757008,0.0007500131,0.000036275134,0.00013627946],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00028030894,0.00034069695,0.003389491,0.00023720591,0.000033994747,0.000008162079,0.00022425446,0.0010575989,0.0005257712],"category_scores_gemma":[0.00031123654,0.00027182465,0.0006002109,0.0003347783,0.00022191137,0.000027483211,0.00005374938,0.0011285406,0.00075615983],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052873173,0.00017132633,0.006710438,0.013148415,0.00008704913,0.0012506789,0.00002243775,2.5226736e-8,4.1630015e-9,0.00015481617,0.0045746546,0.9738273],"study_design_scores_gemma":[0.00047018143,0.0000447331,0.00020333516,0.006080199,0.00052727055,0.0009100979,0.000012907036,0.000004200598,8.73987e-8,0.00021686823,0.991321,0.00020906577],"about_ca_topic_score_codex":0.0000129802775,"about_ca_topic_score_gemma":0.00015018403,"teacher_disagreement_score":0.9867464,"about_ca_system_score_codex":0.0001252876,"about_ca_system_score_gemma":0.0009175968,"threshold_uncertainty_score":0.9999734},"labels":[],"label_agreement":null},{"id":"W4241601903","doi":"10.1503/cmaj.171483","title":"Aspergilloma","year":2018,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Toronto General Hospital; Hospital for Sick Children","funders":"","keywords":"Aspergilloma; Bronchiectasis; Pleural thickening; Medicine; Aspergillosis; Aspergillus fumigatus; Sputum; Computed tomography; Thickening; Radiology; Nuclear medicine; Tuberculosis; Lung; Pathology; Internal medicine; Chemistry","score_opus":0.00835670794080609,"score_gpt":0.26304411430035507,"score_spread":0.254687406359549,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241601903","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85562485,0.00015423214,0.00013012408,0.04621527,0.0010253836,0.00008368537,0.0000070941273,0.000025175697,0.09673417],"genre_scores_gemma":[0.97252357,0.00004912374,0.0001407096,0.019258631,0.003485115,7.9486614e-7,0.000002742541,0.000008473886,0.0045308415],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99813396,0.000058883044,0.00025369631,0.00011271314,0.0010660021,0.00037475143],"domain_scores_gemma":[0.99729425,0.000051286104,0.0000740651,0.00010038741,0.0006254263,0.001854564],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0011792892,0.000068641035,0.00016091224,0.00009130935,0.00025361005,0.000034837463,0.00008962558,0.00026945348,0.018663561],"category_scores_gemma":[0.0027367282,0.000056657533,0.00009333248,0.00017258104,0.000075814285,0.000065401495,0.000006150702,0.0005699341,0.0011082627],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002644509,0.00002530754,0.6424453,0.0000052203554,0.00007189181,0.00050802075,0.00014038819,1.6177047e-8,0.000075023934,0.00039882856,0.31794888,0.03835464],"study_design_scores_gemma":[0.0005128452,0.00011618055,0.4240589,0.000040708743,0.000017203043,0.00035043908,0.00015598843,0.000042577733,0.00005535809,0.00014680371,0.5744422,0.00006076276],"about_ca_topic_score_codex":0.00078669447,"about_ca_topic_score_gemma":0.0354596,"teacher_disagreement_score":0.25649333,"about_ca_system_score_codex":0.00084851234,"about_ca_system_score_gemma":0.0032613236,"threshold_uncertainty_score":0.9996695},"labels":[],"label_agreement":null},{"id":"W4241611803","doi":"10.3410/f.726252186.793516529","title":"Faculty Opinions recommendation of Prevalent mutator genotype identified in fungal pathogen Candida glabrata promotes multi-drug resistance.","year":2016,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Candida glabrata; Genotype; Drug resistance; Pathogen; Microbiology; Biology; Fungal pathogen; Antifungal drug; Resistance (ecology); Antifungal; Genetics; Gene; Ecology","score_opus":0.03423192753485753,"score_gpt":0.35930535083350035,"score_spread":0.3250734232986428,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241611803","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000022041553,0.0036076403,0.000035670757,0.0980739,0.0007256841,0.0029500588,0.8945135,0.00003642328,0.00003509476],"genre_scores_gemma":[0.0001273507,0.00087040477,0.0006822638,0.0015388458,0.00025206868,0.00027874258,0.98971593,0.000040265153,0.0064941156],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99343103,0.0007302937,0.002404519,0.001081155,0.0018226159,0.00053036003],"domain_scores_gemma":[0.9900188,0.00020646947,0.0016817907,0.0021975704,0.005484553,0.00041083814],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002476562,0.0006512353,0.0015492245,0.00042729062,0.00019787408,0.000089072666,0.0012129378,0.0007290106,0.00065907603],"category_scores_gemma":[0.009804113,0.0003908148,0.00071987073,0.0017823428,0.00049842556,0.00035987986,0.00041976277,0.0011448724,0.00005274042],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015806693,0.00083568605,0.00033107397,0.020229872,0.0001586702,0.0000030443687,0.00019464154,7.3626825e-9,0.00004190348,0.00007057811,0.97719145,0.0007849963],"study_design_scores_gemma":[0.0017174099,0.00009129663,0.023819067,0.028814482,0.0002924074,0.0000195635,0.000044577413,0.000003106135,0.00008879768,0.00002121675,0.9447314,0.00035663808],"about_ca_topic_score_codex":0.000099822595,"about_ca_topic_score_gemma":0.00029670607,"teacher_disagreement_score":0.09653506,"about_ca_system_score_codex":0.0003724977,"about_ca_system_score_gemma":0.0013869058,"threshold_uncertainty_score":0.9998544},"labels":[],"label_agreement":null},{"id":"W4242507043","doi":"10.1111/myc.12975","title":"Session","year":2019,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Session (web analytics); Medicine; Psychology; Computer science; World Wide Web","score_opus":0.01274913133217071,"score_gpt":0.28295748718197433,"score_spread":0.2702083558498036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242507043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9443356,0.00020818037,0.000021796503,0.00021232695,0.00009488284,0.00010655965,0.0000011036914,0.000038603546,0.054980963],"genre_scores_gemma":[0.9802741,0.000026381635,0.00018584555,0.00044753132,0.000044622255,0.0000012073048,0.0000049381606,0.000004979178,0.019010426],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996188,0.000007779788,0.00006421753,0.00011028815,0.00010892121,0.00008996762],"domain_scores_gemma":[0.9997062,0.000024583473,0.000012306558,0.00018889278,0.000026879325,0.00004111313],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000057518453,0.00004138096,0.00010124479,0.000016067706,0.00001720249,0.0000044877497,0.000024034736,0.000030442896,0.0015775316],"category_scores_gemma":[0.000043842458,0.000029046512,0.0000408829,0.00005054959,0.00001313341,0.000035467652,0.0000123082455,0.000056154262,0.001377037],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000110065885,0.000055527944,0.91595024,0.00006755321,0.000006243516,0.00000925659,0.000039048704,2.3404374e-7,0.07453585,0.00025982145,0.004032017,0.0049341572],"study_design_scores_gemma":[0.00039449983,0.00012605806,0.94316965,0.00007938518,0.000011339311,0.0000052431446,0.00013648538,0.00002616855,0.014883769,0.00014367723,0.04096986,0.000053863194],"about_ca_topic_score_codex":0.00000828667,"about_ca_topic_score_gemma":0.0000031829652,"teacher_disagreement_score":0.05965208,"about_ca_system_score_codex":0.0000168348,"about_ca_system_score_gemma":0.000030365336,"threshold_uncertainty_score":0.9994005},"labels":[],"label_agreement":null},{"id":"W4243209043","doi":"10.1038/bmt.2009.259","title":"Fungal infection prevention after hematopoietic cell transplantation","year":2009,"lang":"en","type":"article","venue":"Bone Marrow Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Medicine; Hematopoietic cell; Transplantation; Hematopoietic stem cell transplantation; Immunology; Haematopoiesis; Stem cell; Internal medicine; Biology; Genetics","score_opus":0.010368327052348077,"score_gpt":0.25940171826655045,"score_spread":0.24903339121420237,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243209043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97290933,0.00023425002,0.020886574,0.00032634832,0.00011536862,0.0005736531,0.0000219328,0.00014908622,0.004783466],"genre_scores_gemma":[0.9962731,0.0010481802,0.0008088589,0.0002797349,0.00007513355,0.000034675082,0.00036432495,0.000017462506,0.0010985221],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99853337,0.00007781212,0.00041001264,0.00035487144,0.00036710763,0.00025685408],"domain_scores_gemma":[0.99947774,0.000027579366,0.00008943736,0.00020176638,0.00008871161,0.00011475258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023724973,0.00020178551,0.00025678636,0.0001553376,0.00009485426,0.000029347702,0.000030663407,0.00016083267,0.00021641499],"category_scores_gemma":[0.000007378533,0.00019603627,0.00018778717,0.0002416266,0.000034561985,0.0003146685,0.0000012592873,0.00019005,0.00008827949],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.018506236,0.0020942707,0.4791821,0.0055114473,0.00007400823,0.0013979779,0.0048046373,0.00009266004,0.4515201,0.00074946793,0.00042351,0.035643607],"study_design_scores_gemma":[0.0020700474,0.00057310826,0.96192217,0.00026829442,0.00041706552,0.0003038518,0.0000350003,0.00005948544,0.033351984,0.0007057164,0.000081190534,0.00021210288],"about_ca_topic_score_codex":0.000028102395,"about_ca_topic_score_gemma":0.00012823046,"teacher_disagreement_score":0.48274004,"about_ca_system_score_codex":0.00007225631,"about_ca_system_score_gemma":0.000070110844,"threshold_uncertainty_score":0.7994127},"labels":[],"label_agreement":null},{"id":"W4243594762","doi":"10.1086/320541","title":"Answer to Photo Quiz","year":2001,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Dermatology; Medical physics","score_opus":0.04676400227635259,"score_gpt":0.4060464050036213,"score_spread":0.35928240272726875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243594762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981398,0.00030552835,0.00038634965,0.0006884431,0.0004603222,0.00038280344,0.000015313657,0.00023283831,0.016130444],"genre_scores_gemma":[0.9874753,0.00028847673,0.000022739847,0.008173757,0.00064004865,0.000025476991,0.000013990034,0.000018611841,0.003341614],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985934,0.00007437917,0.00043774978,0.00040969194,0.00020515807,0.00027962044],"domain_scores_gemma":[0.9982916,0.0003061305,0.000047956873,0.00048092788,0.00017040492,0.00070294994],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00022268962,0.00013731122,0.00039984254,0.000051885785,0.00008589259,0.000024519222,0.00007021301,0.0001043438,0.001580968],"category_scores_gemma":[0.0024512652,0.00011171668,0.00034141124,0.00026983354,0.00015103006,0.00006797077,0.000044953114,0.00018667114,0.0010597381],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032400244,0.0010981318,0.9689168,0.00002570654,0.0000449025,0.0001080914,0.000010698836,0.0000016015299,0.00007525443,0.00006723485,0.018969795,0.010357818],"study_design_scores_gemma":[0.00088332593,0.0007358301,0.9400452,0.000049538263,0.000117473624,0.000007110621,0.000028369266,0.0000129307,0.00002319565,0.00036867676,0.057600968,0.00012737613],"about_ca_topic_score_codex":0.000033898406,"about_ca_topic_score_gemma":0.000114638664,"teacher_disagreement_score":0.038631175,"about_ca_system_score_codex":0.000053094638,"about_ca_system_score_gemma":0.00013352647,"threshold_uncertainty_score":0.99971807},"labels":[],"label_agreement":null},{"id":"W4244868881","doi":"10.3410/f.726254045.793516492","title":"Faculty Opinions recommendation of Candidalysin is a fungal peptide toxin critical for mucosal infection.","year":2016,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Toxin; Peptide; Microbiology; Biology; Medicine; Biochemistry","score_opus":0.03859090995560675,"score_gpt":0.3941549987590895,"score_spread":0.3555640888034827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244868881","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000031549966,0.0006246975,0.00027393873,0.24520586,0.0007172562,0.0016809102,0.75139314,0.000034266166,0.00006674943],"genre_scores_gemma":[0.00007138071,0.00042905132,0.00068477605,0.0070289834,0.0006779712,0.00038033564,0.9877415,0.000035276706,0.0029507675],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9947818,0.00036282686,0.0019351937,0.00088727224,0.0015313778,0.0005015279],"domain_scores_gemma":[0.986829,0.00048804973,0.001054033,0.0016641173,0.009487382,0.00047745468],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017223546,0.0005803537,0.0014369037,0.0003747497,0.00030139126,0.000086687134,0.0007055433,0.00091919187,0.0011200234],"category_scores_gemma":[0.02347223,0.0003431138,0.001333748,0.0013706225,0.00065268995,0.00033182438,0.00026925787,0.0009692478,0.000048484773],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011921526,0.00062212296,0.00016641773,0.016462602,0.00022976204,4.437806e-7,0.000060919647,5.2637863e-9,0.000007775875,0.0004030228,0.98042625,0.0015014445],"study_design_scores_gemma":[0.001262415,0.00036436194,0.008049721,0.0148114925,0.0006256501,0.000046503712,0.000018346798,0.000006174075,0.000056696936,0.000069209585,0.97436136,0.00032806784],"about_ca_topic_score_codex":0.00011294579,"about_ca_topic_score_gemma":0.0000368484,"teacher_disagreement_score":0.23817688,"about_ca_system_score_codex":0.00026530545,"about_ca_system_score_gemma":0.0012188079,"threshold_uncertainty_score":0.99990207},"labels":[],"label_agreement":null},{"id":"W4245219090","doi":"10.1016/j.tcsw.2019.100023","title":"Assembly and disassembly of Aspergillus fumigatus conidial rodlets","year":2019,"lang":"en","type":"article","venue":"The Cell Surface","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Université Pierre et Marie Curie; Fondation pour la Recherche Médicale; Agence Nationale de la Recherche","keywords":"Conidium; Aspergillus fumigatus; Mutant; Microbiology; Biology; Chemistry; Biochemistry; Botany; Gene","score_opus":0.0065574867737164194,"score_gpt":0.22757449872332247,"score_spread":0.22101701194960605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245219090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9712025,0.001324879,0.00002354647,0.00044211213,0.00013676718,0.0003378075,0.000006799864,0.000021900969,0.026503678],"genre_scores_gemma":[0.9886944,0.00018274692,0.00014324076,0.00013809888,0.000031163287,7.9541434e-7,0.000004116614,0.000014593199,0.010790818],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990675,0.000061123545,0.00019472065,0.00022106282,0.00024022254,0.00021539006],"domain_scores_gemma":[0.99912083,0.00019068085,0.00007320929,0.0004568622,0.00007177819,0.000086664724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035490975,0.00012108369,0.00030544112,0.000011530843,0.000047226316,0.000009819435,0.000096391326,0.00007410906,0.00013734904],"category_scores_gemma":[0.00004660746,0.00007660559,0.00007670151,0.00009615254,0.00013586317,0.0000478412,0.00005676396,0.00014332082,0.00013217557],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040854933,0.00009823935,0.1505275,0.00019570484,0.000027727569,0.0000063423777,0.0004377631,0.000025016961,0.84700525,0.00031341516,0.0004549563,0.0004995235],"study_design_scores_gemma":[0.0021693525,0.0005591713,0.5037654,0.00011185513,0.00014128529,0.000012623021,0.0012494193,0.00027140754,0.48544195,0.00013745028,0.005896643,0.0002434404],"about_ca_topic_score_codex":0.00009851186,"about_ca_topic_score_gemma":0.000026277608,"teacher_disagreement_score":0.3615633,"about_ca_system_score_codex":0.000024402332,"about_ca_system_score_gemma":0.00007278142,"threshold_uncertainty_score":0.31238854},"labels":[],"label_agreement":null},{"id":"W4245713929","doi":"10.1128/jcm.41.7.3410-3412.2003","title":"Quality Control Limits for Fluconazole Disk Susceptibility Tests on Mueller-Hinton Agar with Glucose and Methylene Blue","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; Alberta Hospital Edmonton","funders":"","keywords":"Methylene blue; Agar; Microbiology; Fluconazole; Agar dilution; Agar plate; Biology; Chemistry; Chromatography; Antifungal; Bacteria; Biochemistry","score_opus":0.06309728202043399,"score_gpt":0.40752187177718663,"score_spread":0.3444245897567526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245713929","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99466527,0.0010041094,0.0017068696,0.0013918694,0.00038851707,0.00054201856,0.000059938804,0.000012047182,0.00022933804],"genre_scores_gemma":[0.99417764,0.00037586896,0.0029462453,0.0020082656,0.00024264927,0.000003998744,0.000008570488,0.000019733337,0.0002170337],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99628717,0.00092183665,0.0018291264,0.00047017646,0.000115967436,0.00037572725],"domain_scores_gemma":[0.9923584,0.0052685747,0.0008965339,0.00041543576,0.0007085146,0.00035257862],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0057694768,0.00025020502,0.0015761129,0.000068507994,0.00008526751,0.000012689962,0.00012828749,0.00038376334,0.00007745793],"category_scores_gemma":[0.009868066,0.00015401065,0.00047177484,0.00009228811,0.0005955762,0.00006920795,0.000014860156,0.00075860886,0.0000086185455],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.026230793,0.0022308119,0.69255453,0.00021130196,0.0005944414,0.000048322392,0.000114023685,0.0000066619295,0.2638047,0.00064624456,0.0011687034,0.012389445],"study_design_scores_gemma":[0.025652867,0.018286694,0.88732654,0.0002820517,0.0005165926,0.00037221456,0.00031642252,0.000011227939,0.028358752,0.0011940014,0.0372878,0.0003948529],"about_ca_topic_score_codex":0.0000062173644,"about_ca_topic_score_gemma":0.00015389886,"teacher_disagreement_score":0.23544595,"about_ca_system_score_codex":0.00006125732,"about_ca_system_score_gemma":0.0003336184,"threshold_uncertainty_score":0.9984722},"labels":[],"label_agreement":null},{"id":"W4247078375","doi":"10.22317/jcms.06201706","title":"Molecular and conventional methods for detection of Candida species isolated from a sample of immunocompromised Iraqi patients with pulmonary symptoms","year":2017,"lang":"en","type":"article","venue":"Journal of Contemporary Medical Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Al-Nahrain University; DNA Genotek","keywords":"Sample (material); Pulmonary infection; Medicine; Microbiology; Intensive care medicine; Biology; Internal medicine; Chromatography; Chemistry","score_opus":0.03643022809242496,"score_gpt":0.3415859848904087,"score_spread":0.30515575679798373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247078375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9656011,0.0013094317,0.032121785,0.0003698399,0.00012558828,0.0002277826,0.00002752352,0.0000020571024,0.00021488035],"genre_scores_gemma":[0.9949521,0.000038841423,0.0049152425,0.000030892963,0.000038482627,0.0000018436516,0.0000054399957,0.00000363934,0.000013542806],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984595,0.0000770726,0.00054438866,0.0001386159,0.0006771568,0.000103270904],"domain_scores_gemma":[0.9980325,0.00047389453,0.00086104753,0.00013594376,0.00034244856,0.00015417836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014270827,0.00008459858,0.0004445683,0.00007161341,0.00014365383,0.000018578792,0.00021041234,0.000060802806,0.000056783716],"category_scores_gemma":[0.0014545217,0.000051278883,0.000118098746,0.00007123128,0.0011266207,0.00024261151,0.00003358357,0.00012820376,4.7125027e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040751062,0.0003313686,0.8783784,0.000114681185,0.00020855719,0.000019179797,0.00008727622,4.9032496e-7,0.084317595,0.00012480453,0.000016650874,0.032325897],"study_design_scores_gemma":[0.004034537,0.0028202136,0.9662087,0.0007831381,0.00008361448,0.000013269293,0.00016178394,0.0010228175,0.02316085,0.0012853936,0.00034431493,0.00008139199],"about_ca_topic_score_codex":0.00029275444,"about_ca_topic_score_gemma":0.000017010067,"teacher_disagreement_score":0.08783028,"about_ca_system_score_codex":0.000016985037,"about_ca_system_score_gemma":0.0005040756,"threshold_uncertainty_score":0.41510808},"labels":[],"label_agreement":null},{"id":"W4247092052","doi":"10.3410/f.725394321.793524491","title":"Faculty Opinions recommendation of An expanded regulatory network temporally controls Candida albicans biofilm formation.","year":2016,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Biofilm; Candida albicans; Microbiology; Computational biology; Biology; Chemistry; Genetics; Bacteria","score_opus":0.02869550820591394,"score_gpt":0.3490575197014958,"score_spread":0.32036201149558186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247092052","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000007709402,0.0013826077,0.000098726756,0.09540077,0.0007500547,0.0022419107,0.899932,0.000053608008,0.00013258804],"genre_scores_gemma":[0.00014032196,0.000459069,0.0006592682,0.0060891244,0.00078175945,0.00024018207,0.9898177,0.00003469247,0.0017779015],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9939433,0.00066390564,0.0022933374,0.0007029527,0.0018194296,0.0005771163],"domain_scores_gemma":[0.9887743,0.00019692795,0.0021206576,0.0022500115,0.006025394,0.0006327115],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0025141612,0.00061511993,0.001550659,0.00028752387,0.00030324163,0.000083544146,0.0010372938,0.00092426786,0.00075314974],"category_scores_gemma":[0.005284861,0.0003537542,0.00082488573,0.001416837,0.0005487745,0.00077351136,0.00025106946,0.0009306351,0.000032391476],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012177236,0.00047287944,0.0001132622,0.006408585,0.00019042585,4.5106992e-7,0.000075977536,4.7670458e-8,0.000009125999,0.00025850238,0.99041843,0.001930519],"study_design_scores_gemma":[0.0015756551,0.00030364256,0.010884933,0.015906002,0.00032086673,0.000052631538,0.000048059494,0.000007867439,0.000020739744,0.000032853433,0.9705,0.00034673305],"about_ca_topic_score_codex":0.00006863897,"about_ca_topic_score_gemma":0.00003622349,"teacher_disagreement_score":0.08988566,"about_ca_system_score_codex":0.00027335552,"about_ca_system_score_gemma":0.0011377564,"threshold_uncertainty_score":0.99989146},"labels":[],"label_agreement":null},{"id":"W4247250778","doi":"10.3410/f.737143858.793572940","title":"Faculty Opinions recommendation of Aspergillus fumigatus calcium-responsive transcription factors regulate cell wall architecture promoting stress tolerance, virulence and caspofungin resistance.","year":2020,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Caspofungin; Aspergillus fumigatus; Virulence; Transcription factor; Architecture; Antifungal; Transcription (linguistics); Microbiology; Biology; Gene; Biochemistry","score_opus":0.029178823025751373,"score_gpt":0.32351859155745155,"score_spread":0.2943397685317002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247250778","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016515516,0.002664703,0.00006852442,0.08701161,0.00041634537,0.0022426173,0.90734065,0.00005227098,0.000038151924],"genre_scores_gemma":[0.0015180947,0.00076645747,0.0006136078,0.0020926096,0.00020339212,0.000100128105,0.9935293,0.00004253003,0.0011338633],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99420774,0.0006411985,0.001848574,0.0011310276,0.0016705545,0.00050088787],"domain_scores_gemma":[0.9924288,0.00022554945,0.0014589849,0.0013381292,0.0039837407,0.0005648204],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009612902,0.00075679296,0.0015659666,0.00032307563,0.0003090122,0.000100121026,0.0008131106,0.00086080877,0.00016837851],"category_scores_gemma":[0.0040218434,0.00049727043,0.0007289374,0.0017754161,0.0005847332,0.00029887873,0.0002301955,0.0017705441,0.000012276307],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028886503,0.00041383525,0.00006134691,0.02858858,0.00013259189,0.0000025332386,0.0010040305,2.499002e-7,0.0002015089,0.000053008276,0.96843594,0.00081751944],"study_design_scores_gemma":[0.0010781938,0.0003015345,0.009397962,0.021670232,0.00041871896,0.0000205212,0.00015513037,0.000013796253,0.0006083734,0.000020472915,0.965903,0.00041209077],"about_ca_topic_score_codex":0.00007717083,"about_ca_topic_score_gemma":0.000054551296,"teacher_disagreement_score":0.0861887,"about_ca_system_score_codex":0.00018595683,"about_ca_system_score_gemma":0.0006910034,"threshold_uncertainty_score":0.9997479},"labels":[],"label_agreement":null},{"id":"W4247913450","doi":"10.1201/b16593-18","title":"Hsp90 Governs Dispersion and Drug Resistance of Fungal Biofi lms","year":2014,"lang":"en","type":"book-chapter","venue":"Apple Academic Press eBooks","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; American Heart Association","keywords":"Dispersion (optics); Materials science; Physics; Optics","score_opus":0.0236261621341887,"score_gpt":0.2622091386952695,"score_spread":0.23858297656108082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247913450","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012458794,0.011843019,0.0002993098,0.00024651975,0.00019161677,0.0013258802,0.00046547147,0.00012683806,0.97304255],"genre_scores_gemma":[0.21795496,0.0022764767,0.00016115732,0.0002658773,0.00029503065,0.000017497925,0.000062096486,0.00008046362,0.77888644],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.997351,0.00003732718,0.0007383342,0.000786289,0.00070700416,0.00038008104],"domain_scores_gemma":[0.9980898,0.00021101056,0.0005009153,0.00080766133,0.00012379832,0.00026683125],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00045358134,0.0004826733,0.0010175245,0.000080276746,0.000087780994,0.000010280591,0.0003026351,0.0009176848,0.00006187475],"category_scores_gemma":[0.000092311755,0.00042439075,0.00024330206,0.000009807332,0.00062725914,0.00004005627,0.00024637918,0.0014616137,0.000015586114],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0048079505,0.00006558541,0.005886782,0.00875847,0.0007881364,0.00013381854,0.0021322037,3.9966216e-7,0.036014866,0.71400124,0.197283,0.030127568],"study_design_scores_gemma":[0.001164747,0.000082356295,0.0007029135,0.0022159691,0.0004951951,0.000017177277,0.000043316766,0.0000131780225,0.0072448533,0.0033562465,0.9841346,0.00052940275],"about_ca_topic_score_codex":0.00007487452,"about_ca_topic_score_gemma":0.0000541046,"teacher_disagreement_score":0.78685164,"about_ca_system_score_codex":0.000097928205,"about_ca_system_score_gemma":0.00010958612,"threshold_uncertainty_score":0.99982077},"labels":[],"label_agreement":null},{"id":"W4248445586","doi":"10.2174/187443700701011007","title":"Engineered Keratinized Oral Mucosa Decreased C. albicans Transition Through the Production of Keratins 10, 14, 16, and 19 by Oral Epithelial Cells","year":2007,"lang":"en","type":"article","venue":"The Open Mycology Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Candida albicans; Keratin; Oral mucosa; Corpus albicans; Biology; Keratin 14; Microbiology; Anatomy; Biochemistry; Genetics","score_opus":0.023354506247027933,"score_gpt":0.30802916877318426,"score_spread":0.2846746625261563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248445586","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9835683,0.0003109335,0.005275601,0.008076582,0.00037636515,0.0009862799,0.000027919537,0.000012437297,0.0013655518],"genre_scores_gemma":[0.9949345,0.0002131263,0.0016472893,0.0009926836,0.00024979946,0.000008569519,0.000022609454,0.000016186113,0.0019152182],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982354,0.00042256786,0.0005309298,0.00023005996,0.00026408874,0.00031697092],"domain_scores_gemma":[0.9988042,0.00031471357,0.00021768532,0.00029190432,0.00023768896,0.00013378082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029848253,0.00017095917,0.0004310994,0.000036551406,0.0004812691,0.000056324985,0.00024477186,0.00013209617,0.00087783067],"category_scores_gemma":[0.00043486807,0.000092898015,0.00009954381,0.00018148992,0.0004205168,0.00019764781,0.000039113358,0.0005362471,0.0000081789285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010975618,0.000619367,0.001301656,0.000046644152,0.0003289633,0.000053478263,0.0047656763,0.000045929744,0.90669376,0.00044487749,0.07010442,0.004619628],"study_design_scores_gemma":[0.02753529,0.0069811316,0.097018614,0.0003714762,0.0023788235,0.0048139226,0.016976582,0.00066385756,0.75495785,0.0061492617,0.08110895,0.0010442244],"about_ca_topic_score_codex":0.0002356239,"about_ca_topic_score_gemma":0.0005317391,"teacher_disagreement_score":0.15173587,"about_ca_system_score_codex":0.00008233238,"about_ca_system_score_gemma":0.00025819585,"threshold_uncertainty_score":0.96116304},"labels":[],"label_agreement":null},{"id":"W4248994245","doi":"10.3410/f.731737029.793537531","title":"Faculty Opinions recommendation of Disarming Fungal Pathogens: Bacillus safensis Inhibits Virulence Factor Production and Biofilm Formation by Cryptococcus neoformans and Candida albicans.","year":2017,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Yonsei University; National Institutes of Health; Concordia University; University of California, San Francisco; Deutsche Forschungsgemeinschaft","keywords":"Cryptococcus neoformans; Candida albicans; Microbiology; Virulence; Biofilm; Biology; Virulence factor; Cryptococcus; Corpus albicans; Antifungal; Bacillus (shape); Bacteria; Gene; Genetics","score_opus":0.030787835152946162,"score_gpt":0.3445847042460836,"score_spread":0.3137968690931375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248994245","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020705743,0.0020617028,0.000044014767,0.06418613,0.00046790275,0.002127392,0.93085426,0.00002755989,0.000023963474],"genre_scores_gemma":[0.0009971212,0.0025623897,0.0002588264,0.0011182042,0.00018542095,0.00013927082,0.9941565,0.000021235961,0.00056103914],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99610347,0.0002562139,0.0014004807,0.0007503698,0.0011225867,0.00036685367],"domain_scores_gemma":[0.9934076,0.000089283174,0.0015959891,0.0012359695,0.0033203822,0.00035075555],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010863058,0.00051348645,0.0010211704,0.00024662277,0.0005115989,0.00014047683,0.00045483423,0.0006105639,0.00013451531],"category_scores_gemma":[0.008296989,0.0003361747,0.0003032444,0.0006421516,0.0006626666,0.00081659504,0.0003121802,0.0008513945,0.000010224788],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006273223,0.0001911783,0.00022398756,0.011466857,0.000086030195,3.458823e-7,0.00024370728,9.333854e-9,0.00011260472,0.000018344203,0.97799003,0.009604145],"study_design_scores_gemma":[0.0006199986,0.00021100578,0.014280831,0.012987256,0.0002753794,0.00007831007,0.000093476905,0.000013577633,0.00021314198,0.0000069505786,0.9709146,0.00030544514],"about_ca_topic_score_codex":0.00010378388,"about_ca_topic_score_gemma":0.00005109598,"teacher_disagreement_score":0.06330222,"about_ca_system_score_codex":0.00015700977,"about_ca_system_score_gemma":0.00037602996,"threshold_uncertainty_score":0.99990904},"labels":[],"label_agreement":null},{"id":"W4250070835","doi":"10.1007/978-0-387-73657-0_202","title":"Inhibition of pathogenically-related morphologic transition in Candida albicans by disrupting Cdc42 binding to its effectors","year":2009,"lang":"en","type":"article","venue":"Advances in experimental medicine and biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; Biotechnology Research Institute","funders":"","keywords":"Candida albicans; Effector; CDC42; Transition (genetics); Chemistry; Cell biology; Microbiology; Biology; Biochemistry; Signal transduction; Gene","score_opus":0.018025589478749344,"score_gpt":0.35552534328016044,"score_spread":0.3374997538014111,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250070835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869868,0.011122171,0.000069874885,0.0008124655,0.000072321054,0.00039617842,0.0000103339835,0.000014009226,0.0005158064],"genre_scores_gemma":[0.9980379,0.000992261,0.00013853855,0.00068400084,0.000027852748,0.000016152995,0.00008658467,0.000005007117,0.000011755236],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99883974,0.0000885647,0.00044139344,0.00031973232,0.00008108977,0.0002295121],"domain_scores_gemma":[0.9996326,0.00010244973,0.00007174132,0.00008731849,0.000018623887,0.00008727043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026943997,0.00013873982,0.00043940998,0.00015429617,0.00002670405,0.0000011057352,0.000033465436,0.00011935927,0.000061342704],"category_scores_gemma":[0.0001447873,0.00010104437,0.00003234282,0.00030600067,0.00017746985,0.000085763284,0.0000116957,0.00015412077,0.0000013691063],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046361782,0.00014317641,0.04403398,0.000030541116,0.0000037964794,0.000030855845,0.0012120503,0.0000024036392,0.9468604,0.00009941662,0.000011185811,0.0071086166],"study_design_scores_gemma":[0.012042143,0.020263676,0.123679854,0.0024687033,0.00006088671,0.00010442085,0.012912954,0.0002197585,0.8263832,0.0007218968,0.00056687894,0.00057564303],"about_ca_topic_score_codex":0.000072348346,"about_ca_topic_score_gemma":0.00006306011,"teacher_disagreement_score":0.12047718,"about_ca_system_score_codex":0.000080979444,"about_ca_system_score_gemma":0.000011879882,"threshold_uncertainty_score":0.41204697},"labels":[],"label_agreement":null},{"id":"W4251099856","doi":"10.3410/f.718048531.793481298","title":"Faculty Opinions recommendation of Passage through the mammalian gut triggers a phenotypic switch that promotes Candida albicans commensalism.","year":2013,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Commensalism; Candida albicans; Phenotype; Microbiology; Phenotypic switching; Biology; Bacteria; Genetics; Gene","score_opus":0.05070239502705697,"score_gpt":0.35723638479388153,"score_spread":0.30653398976682456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251099856","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000036765985,0.001338826,0.000033508342,0.34650803,0.0004937145,0.002620743,0.64879835,0.000034572582,0.00016854572],"genre_scores_gemma":[0.000303027,0.0006787761,0.00042684007,0.01355175,0.00035770828,0.00046219412,0.9807094,0.00004475056,0.0034655975],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99353856,0.0008148643,0.001928403,0.000907374,0.0022164183,0.00059440936],"domain_scores_gemma":[0.9896637,0.00037633043,0.0019148552,0.0027470072,0.0049176705,0.00038040077],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0018751227,0.00076018355,0.0016119562,0.00020745688,0.00060608756,0.00015326418,0.0017956264,0.00089385844,0.0016965155],"category_scores_gemma":[0.0062944195,0.00039485845,0.0010354609,0.0019401568,0.00089691766,0.00042073068,0.0007187173,0.0018126098,0.00006984669],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056621302,0.00055523997,0.00006470123,0.009166512,0.00029368539,6.768688e-7,0.0005875875,1.9057936e-8,0.000003822799,0.00037926502,0.9872839,0.0016079838],"study_design_scores_gemma":[0.0011014952,0.0002315052,0.005371255,0.010881503,0.00058014045,0.0000341565,0.00022614766,0.000005938059,0.000024996916,0.00011519769,0.9810585,0.00036916448],"about_ca_topic_score_codex":0.00076484826,"about_ca_topic_score_gemma":0.00008965022,"teacher_disagreement_score":0.33295628,"about_ca_system_score_codex":0.00024827072,"about_ca_system_score_gemma":0.0009513547,"threshold_uncertainty_score":0.99985033},"labels":[],"label_agreement":null},{"id":"W4253395857","doi":"10.1016/s0378-1097(01)00362-7","title":"Predicting the emergence of resistance to antifungal drugs","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Fitness landscape; Context (archaeology); Genetics; Genome; Gene; Human evolutionary genetics; Resistance (ecology); Antifungal; Adaptation (eye); Antifungal drug; Genetic Fitness; Allele; Drug resistance; Adaptive evolution; Evolutionary biology; Ecology; Population; Microbiology","score_opus":0.011832308723272353,"score_gpt":0.2580882416127926,"score_spread":0.24625593288952025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253395857","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9842012,0.00035307897,0.00043609858,0.012764602,0.00030087042,0.00034025402,0.000026136107,0.000038709233,0.001539052],"genre_scores_gemma":[0.9913903,0.00005190225,0.0004116194,0.0064092237,0.00013778878,0.000009375176,0.000018535435,0.000013276041,0.0015580116],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998778,0.00008433499,0.00035286724,0.0003412676,0.000084831816,0.00035871842],"domain_scores_gemma":[0.99913454,0.00011588285,0.0001051507,0.0004889994,0.00008389134,0.00007151211],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040063582,0.00014296714,0.00029355302,0.000058903093,0.00012193684,0.000004892691,0.00021366171,0.0000823826,0.0002148],"category_scores_gemma":[0.00016247621,0.00009832076,0.0001209771,0.00030501993,0.00030853497,0.000035822402,0.000059647784,0.00022665421,0.000064140055],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028852158,0.000027745424,0.27540526,0.000024886707,0.00003338747,0.000019657358,0.000503462,0.0000037382974,0.6966776,0.000019898655,0.026827808,0.00016803475],"study_design_scores_gemma":[0.0012389654,0.00027837403,0.8004353,0.00039657994,0.0001463028,0.0001581838,0.0025740077,0.0000138399355,0.12742269,0.000027844118,0.066896506,0.00041141213],"about_ca_topic_score_codex":0.000045743072,"about_ca_topic_score_gemma":0.00011156831,"teacher_disagreement_score":0.56925493,"about_ca_system_score_codex":0.000028764283,"about_ca_system_score_gemma":0.000042236476,"threshold_uncertainty_score":0.40094042},"labels":[],"label_agreement":null},{"id":"W4253629716","doi":"10.3410/f.718880167.793502175","title":"Faculty Opinions recommendation of Comparative phenotypic analysis of the major fungal pathogens Candida parapsilosis and Candida albicans.","year":2014,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Candida parapsilosis; Candida albicans; Microbiology; Biology; Phenotype; Genetics; Gene","score_opus":0.03354927739525018,"score_gpt":0.35754201047232675,"score_spread":0.32399273307707654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253629716","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013598475,0.0017385456,0.00003341776,0.058129746,0.0003263262,0.0014977792,0.9380513,0.000014287704,0.000072601484],"genre_scores_gemma":[0.0039932793,0.0003700637,0.00020083223,0.0024847263,0.00011987106,0.00011329673,0.9920718,0.000016777914,0.00062937476],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.994863,0.0007490443,0.0018203439,0.0007313116,0.0014983867,0.00033795196],"domain_scores_gemma":[0.9909145,0.0002979655,0.0019393879,0.0018514275,0.0046741883,0.00032249384],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014432402,0.00052449916,0.0020562487,0.0004345493,0.00026603488,0.000050399958,0.0008990496,0.000568116,0.0005036468],"category_scores_gemma":[0.0034216936,0.00028609077,0.0011230349,0.0036270728,0.0008830701,0.0001378896,0.00033864565,0.00094127137,0.0000061265237],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000078070676,0.0003639774,0.001751901,0.0057888287,0.0014182108,1.7730143e-7,0.00027286742,1.5749858e-7,0.000009587449,0.00020284258,0.98962504,0.0004883282],"study_design_scores_gemma":[0.0006912495,0.00015023837,0.1294752,0.00503616,0.0036533359,0.000009125494,0.00008698704,0.00003275037,0.000029171995,0.000011683546,0.8606013,0.00022279944],"about_ca_topic_score_codex":0.00040734047,"about_ca_topic_score_gemma":0.0003632511,"teacher_disagreement_score":0.12902376,"about_ca_system_score_codex":0.00013833704,"about_ca_system_score_gemma":0.00066004065,"threshold_uncertainty_score":0.9999591},"labels":[],"label_agreement":null},{"id":"W4253642222","doi":"10.21275/v5i6.nov164480","title":"Isolation of Candida by using Sabouraud","year":2016,"lang":"en","type":"article","venue":"International Journal of Science and Research (IJSR)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Society of Microbiologists","funders":"","keywords":"Isolation (microbiology); Microbiology; Biology","score_opus":0.06895901242534196,"score_gpt":0.4408603306952852,"score_spread":0.3719013182699432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253642222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943131,0.00028955683,0.0010929565,0.0034735121,0.00016795257,0.0000488471,0.000007725356,0.0000013484523,0.00060497],"genre_scores_gemma":[0.9984605,0.00038766098,0.00051219924,0.00005091564,0.00013213199,2.2071255e-7,2.247542e-7,0.0000026496155,0.000453515],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9973421,0.00002862871,0.00027809467,0.00011603311,0.0020617947,0.00017333562],"domain_scores_gemma":[0.99594367,0.00015022523,0.00013154554,0.00007996874,0.0035432559,0.00015132343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003150012,0.000042269843,0.000119595104,0.00037266838,0.0001026354,0.000042105275,0.00025020944,0.000028945416,0.00007970237],"category_scores_gemma":[0.001615528,0.000023242183,0.00003905301,0.00024279533,0.0015144648,0.00047136704,0.00006433732,0.00014212918,0.0000022417764],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026845763,0.00005165632,0.117077924,0.000007723382,0.000017231074,0.000017212571,0.0001408292,4.2567868e-7,0.8686622,0.00021610905,0.0006900685,0.012850167],"study_design_scores_gemma":[0.0040657623,0.0013381399,0.59513164,0.0020087399,0.00003399868,0.00061112654,0.0026151072,0.0010402164,0.3817228,0.0038217388,0.0074077714,0.00020295229],"about_ca_topic_score_codex":0.00007306268,"about_ca_topic_score_gemma":0.0000053303474,"teacher_disagreement_score":0.48693937,"about_ca_system_score_codex":0.00022618439,"about_ca_system_score_gemma":0.0008285372,"threshold_uncertainty_score":0.5580109},"labels":[],"label_agreement":null},{"id":"W4254009089","doi":"10.1177/229255031001800205","title":"Mucormycosis Infection Following Intravenous Access in the Forearm","year":2010,"lang":"en","type":"article","venue":"Canadian Journal of Plastic Surgery","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Mucormycosis; Forearm; Surgery; Pathological; Pathology","score_opus":0.027999615475401383,"score_gpt":0.2779825697010092,"score_spread":0.24998295422560782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254009089","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99645776,0.00009357704,0.00013972154,0.00026657296,0.0024544126,0.000066296685,0.0000027786732,0.0000027707015,0.0005160887],"genre_scores_gemma":[0.9994135,0.000013869221,0.000016061405,0.00022348725,0.00030511117,0.0000016282737,0.0000024670248,0.0000086798955,0.000015234969],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99904764,0.00004670569,0.0003550151,0.00008485566,0.00019991177,0.00026589795],"domain_scores_gemma":[0.99777406,0.0015429343,0.00011762698,0.00014221802,0.00010136233,0.0003218051],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011575401,0.00008468911,0.00026535007,0.0003943293,0.000091257316,0.00006441199,0.00010636311,0.00008232238,0.0001666948],"category_scores_gemma":[0.0048188237,0.000057950045,0.00026113214,0.00032127288,0.000061477476,0.00018197214,0.000003867782,0.0005637555,0.0000063635075],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034423225,0.00002505006,0.99386877,0.000021210035,0.000029343919,0.00077667687,0.00018444864,0.0000039590745,0.00027562678,0.000026599486,0.0017629393,0.0029909818],"study_design_scores_gemma":[0.00017694976,0.00004698033,0.9974068,0.00013437142,0.000060962568,0.00022990174,0.00013232506,0.000013889018,0.00007316819,0.00011180144,0.0015555042,0.000057335863],"about_ca_topic_score_codex":0.006874192,"about_ca_topic_score_gemma":0.17466801,"teacher_disagreement_score":0.16779381,"about_ca_system_score_codex":0.00009788471,"about_ca_system_score_gemma":0.0018301521,"threshold_uncertainty_score":0.9997391},"labels":[],"label_agreement":null},{"id":"W4254354819","doi":"10.1111/j.1365-2125.2004.02073.x","title":"The effects of renal impairment on the pharmacokinetics and safety of fosfluconazole and fluconazole following a single intravenous bolus injection of fosfluconazole","year":2004,"lang":"en","type":"article","venue":"British Journal of Clinical Pharmacology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"ASTER","funders":"","keywords":"Pharmacokinetics; Renal function; Bolus (digestion); Fluconazole; Medicine; Urine; Volume of distribution; Chemistry; Pharmacology; Urology; Internal medicine; Antifungal","score_opus":0.018924834600345528,"score_gpt":0.3401025668035141,"score_spread":0.32117773220316853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254354819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904043,0.0066905944,0.00018293885,0.0011057649,0.00091244484,0.0005134558,0.0000126641535,0.000005026237,0.0001727984],"genre_scores_gemma":[0.9923904,0.006458423,0.00013319006,0.0006548376,0.00031441616,0.0000039581773,0.0000011962177,0.000014706935,0.000028858109],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99703276,0.00041156475,0.0017011272,0.00020117156,0.00039566803,0.00025771125],"domain_scores_gemma":[0.9953383,0.0030559986,0.0009625595,0.00013296552,0.0003279953,0.00018214234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024181043,0.00015094352,0.0008668707,0.000059536498,0.00013844692,0.000011642092,0.00016225417,0.000140446,0.000026919639],"category_scores_gemma":[0.0014240606,0.00010823791,0.00042783676,0.0001371584,0.0007434014,0.00007236088,0.000082454375,0.00069859874,4.374687e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.025661765,0.0070692436,0.03726979,0.0013390462,0.0035455534,0.0011100122,0.00083728484,0.00027766373,0.6167223,0.00036998137,0.0048750066,0.3009224],"study_design_scores_gemma":[0.039590016,0.019920861,0.6289422,0.0024968323,0.0024626371,0.002297918,0.000612946,0.00017827084,0.29877985,0.002110939,0.0023064816,0.00030105654],"about_ca_topic_score_codex":0.000039717317,"about_ca_topic_score_gemma":0.000022150092,"teacher_disagreement_score":0.5916724,"about_ca_system_score_codex":0.000057151698,"about_ca_system_score_gemma":0.00030123148,"threshold_uncertainty_score":0.4413814},"labels":[],"label_agreement":null},{"id":"W4254848787","doi":"10.21203/rs.3.rs-279551/v3","title":"The network interplay of interferon and toll-like receptor signaling pathways in the anti-Candida immune response","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Natural Sciences and Engineering Research Council of Canada; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Biology; Immune system; Transcriptome; Innate immune system; Interferon; Candida albicans; Toll-like receptor; Signal transduction; Microarray analysis techniques; Receptor; Computational biology; Immunology; Gene; Cell biology; Microbiology; Gene expression; Genetics","score_opus":0.04952235510037853,"score_gpt":0.3773562979922077,"score_spread":0.3278339428918292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254848787","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98030496,0.015941171,0.000063141495,0.0017726754,0.0002504426,0.0012974209,0.000034915913,0.000016112595,0.0003191638],"genre_scores_gemma":[0.99528897,0.0038081987,0.00008833266,0.00005768174,0.00019692544,0.000087790104,0.00006779512,0.000031701096,0.0003726003],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9932264,0.003521103,0.000742679,0.00063214236,0.0011629346,0.0007147545],"domain_scores_gemma":[0.99350756,0.004235121,0.00015646683,0.0013934409,0.00058746245,0.00011993983],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.01452231,0.00026334665,0.0006973125,0.00013848154,0.00033243734,0.00020053287,0.00058717973,0.00032590167,0.000113048896],"category_scores_gemma":[0.0026960042,0.00015264585,0.0002493268,0.000545009,0.00065381883,0.000053664593,0.0011246916,0.0028171546,0.0000064722262],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.10322588,0.0019775662,0.39877498,0.013227107,0.0011101575,0.0017978471,0.06718058,0.00043500695,0.3652065,0.0010867586,0.01545321,0.03052438],"study_design_scores_gemma":[0.002933184,0.0037288787,0.81820256,0.030414458,0.000117581134,0.00006023575,0.12308338,0.0011250145,0.011680093,0.001197868,0.0067204386,0.00073629513],"about_ca_topic_score_codex":0.00029790978,"about_ca_topic_score_gemma":0.0004587289,"teacher_disagreement_score":0.41942757,"about_ca_system_score_codex":0.0002397619,"about_ca_system_score_gemma":0.00088682486,"threshold_uncertainty_score":0.9994834},"labels":[],"label_agreement":null},{"id":"W4255220707","doi":"10.3410/f.1008794.112061","title":"Faculty Opinions recommendation of Ca3 fingerprinting of Candida albicans bloodstream isolates from the United States, Canada, South America, and Europe reveals a European clade.","year":2002,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Clade; Candida albicans; DNA profiling; Bloodstream infection; Corpus albicans; Microbiology; Biology; Geography; Genealogy; Genetics; Phylogenetics; History; Gene","score_opus":0.025841063452552226,"score_gpt":0.3031786897799447,"score_spread":0.2773376263273925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255220707","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017642461,0.002016474,0.000013003763,0.09778908,0.00019557567,0.0009793196,0.8987451,0.000018193066,0.000066826324],"genre_scores_gemma":[0.00041873904,0.0014499179,0.00026276967,0.0062178955,0.00016432218,0.000027865191,0.9905393,0.000032230502,0.0008869376],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99541324,0.00075045036,0.0017718668,0.0006530282,0.0010621304,0.0003492743],"domain_scores_gemma":[0.991505,0.00045942672,0.0019846037,0.0014984255,0.004236788,0.0003157053],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00086804695,0.00048531938,0.0011582306,0.0001807549,0.0002352657,0.00006535435,0.00091208617,0.0002644653,0.00044072905],"category_scores_gemma":[0.009446576,0.0002772968,0.00032003608,0.0020342688,0.0005958284,0.00010849019,0.00039739627,0.0011313071,0.0000081916],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028834085,0.00020049693,0.000511305,0.0034072679,0.00025019966,0.0000010021647,0.00045329568,1.7842473e-7,0.000007378328,0.000010512983,0.993888,0.0012415206],"study_design_scores_gemma":[0.0005636309,0.00012586483,0.0346348,0.01137138,0.00045007528,0.0000123096215,0.00024370357,0.000028872675,0.0000066063367,0.0000029542596,0.9523324,0.00022741022],"about_ca_topic_score_codex":0.05167347,"about_ca_topic_score_gemma":0.0035470102,"teacher_disagreement_score":0.09179422,"about_ca_system_score_codex":0.00010330021,"about_ca_system_score_gemma":0.0007181961,"threshold_uncertainty_score":0.99996793},"labels":[],"label_agreement":null},{"id":"W4255721732","doi":"10.3410/f.11547963.12596063","title":"Faculty Opinions recommendation of Invasive fungal infections and antifungal therapies in solid organ transplant recipients.","year":2011,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"","keywords":"Antifungal; Solid organ; Organ transplantation; Antifungal drugs; Medicine; Microbiology; Intensive care medicine; Biology; Internal medicine; Transplantation","score_opus":0.03723484126231353,"score_gpt":0.34991550007363925,"score_spread":0.31268065881132573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255721732","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015568252,0.0015048267,0.00001696597,0.04083325,0.0005767948,0.001622422,0.9551793,0.000027147205,0.000083636405],"genre_scores_gemma":[0.0017071556,0.0029669306,0.0001764936,0.0018035709,0.00014676443,0.0001322501,0.9924699,0.000026363097,0.0005705612],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99579644,0.0004605392,0.0016596281,0.0007256996,0.0009829579,0.00037475233],"domain_scores_gemma":[0.99379194,0.0002098053,0.0009920879,0.0011532984,0.0035490214,0.00030387493],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013444,0.0005182174,0.0012663243,0.00049692235,0.00020264756,0.000057573507,0.00059384335,0.00075053377,0.00063684676],"category_scores_gemma":[0.0049281428,0.0003350843,0.0004852921,0.0017164088,0.000596285,0.00032441362,0.000204801,0.0013271212,0.000021273974],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008698038,0.00094609446,0.0035457474,0.007405822,0.00020037882,0.0000014163005,0.00055554707,1.0957741e-8,0.0000149586585,0.00013403533,0.9861365,0.0009724987],"study_design_scores_gemma":[0.0010047894,0.0003225583,0.13039166,0.017979756,0.0002707233,0.00007155911,0.00008135725,0.0000013613827,0.00006282181,0.00002644376,0.84952706,0.0002599143],"about_ca_topic_score_codex":0.00016146613,"about_ca_topic_score_gemma":0.00015568353,"teacher_disagreement_score":0.13660945,"about_ca_system_score_codex":0.00012501117,"about_ca_system_score_gemma":0.000777273,"threshold_uncertainty_score":0.9999101},"labels":[],"label_agreement":null},{"id":"W4255763756","doi":"10.1111/jdv.12837","title":"Erratum","year":2014,"lang":"en","type":"erratum","venue":"Journal of the European Academy of Dermatology and Venereology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.018999085648673083,"score_gpt":0.28217887059944186,"score_spread":0.26317978495076877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255763756","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19161427,0.084133625,0.00063741306,0.09971297,0.038604368,0.0007385059,0.000035206915,0.000055119308,0.58446854],"genre_scores_gemma":[0.9226703,0.0033278728,0.00015825771,0.0030817376,0.0016719231,3.7376626e-7,0.000004778108,0.000047733218,0.06903705],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99656,0.0016822898,0.0010237965,0.00021613145,0.00024157391,0.0002762297],"domain_scores_gemma":[0.9977923,0.00019297161,0.0015085272,0.00024446636,0.00012190546,0.00013980438],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0010237461,0.00025300847,0.0012681966,0.0001847604,0.000090262765,0.0000043653035,0.00049216545,0.0007111703,0.000038491467],"category_scores_gemma":[0.00064120063,0.00015402767,0.00042128374,0.00010695789,0.0010140624,0.000041279025,0.00021402782,0.003015989,0.000014035816],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039035187,0.000062772306,0.06749296,0.00053884345,0.00034791487,0.00020966984,0.00007332556,4.097359e-7,0.0002998596,0.0014450107,0.92788225,0.0012566068],"study_design_scores_gemma":[0.0011250231,0.000084723724,0.27561533,0.000740314,0.0008453815,0.018606665,0.00003345735,0.0000069831635,0.00025086332,0.0032996803,0.69922775,0.00016380408],"about_ca_topic_score_codex":6.316759e-7,"about_ca_topic_score_gemma":0.0000012502195,"teacher_disagreement_score":0.73105603,"about_ca_system_score_codex":0.00002290233,"about_ca_system_score_gemma":0.00019200408,"threshold_uncertainty_score":0.9992841},"labels":[],"label_agreement":null},{"id":"W4256506604","doi":"10.3410/f.726381257.793524489","title":"Faculty Opinions recommendation of Hsf1 and Hsp90 orchestrate temperature-dependent global transcriptional remodelling and chromatin architecture in Candida albicans.","year":2016,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Candida albicans; HSF1; Hsp90; Architecture; Chromatin; Biology; Computational biology; Genetics; Heat shock protein; Geography; Gene; Hsp70","score_opus":0.02666143220737546,"score_gpt":0.34027929853564143,"score_spread":0.313617866328266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256506604","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012638302,0.0027809308,0.00006195722,0.12005285,0.00022478738,0.0012736612,0.8754163,0.000019397783,0.000043758846],"genre_scores_gemma":[0.00087831606,0.0014009397,0.00061268633,0.0020167853,0.00017389981,0.000083116975,0.9943807,0.00001851411,0.00043502136],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99585676,0.0003900351,0.0014217723,0.00079636846,0.001178719,0.00035637163],"domain_scores_gemma":[0.99606514,0.00012696693,0.0006998788,0.0008373106,0.001915497,0.00035522785],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013012028,0.00050865154,0.0011065915,0.00022599378,0.00016355023,0.00008031485,0.0004626323,0.00074963825,0.00019099745],"category_scores_gemma":[0.0023257136,0.00029997862,0.00031791054,0.00095898967,0.00058325735,0.00021274852,0.0001570749,0.0010788987,0.0000036254385],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001208888,0.00027370933,0.00023912931,0.010705342,0.00011276779,0.0000014894449,0.00013420651,1.7185093e-7,0.000065464774,0.0003055564,0.9853791,0.0026621846],"study_design_scores_gemma":[0.0014242489,0.00017024494,0.0283983,0.019028727,0.00018037586,0.000115835785,0.000043371532,0.000010357024,0.000018628585,0.00013432433,0.950195,0.0002805947],"about_ca_topic_score_codex":0.00016738889,"about_ca_topic_score_gemma":0.000153572,"teacher_disagreement_score":0.11896445,"about_ca_system_score_codex":0.0001941234,"about_ca_system_score_gemma":0.0007836461,"threshold_uncertainty_score":0.9999452},"labels":[],"label_agreement":null},{"id":"W4280500423","doi":"10.3390/microbiolres13020019","title":"Review of Treatments for Oropharyngeal Fungal Infections in HIV/AIDS Patients","year":2022,"lang":"en","type":"article","venue":"Microbiology Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Laurentian University","funders":"","keywords":"Fluconazole; Medicine; Miconazole; Nystatin; Esophageal candidiasis; Thrush; Adverse effect; Amphotericin B; Posaconazole; Clinical trial; Dermatology; Internal medicine; Human immunodeficiency virus (HIV); Intensive care medicine; Antifungal; Immunology; Viral disease; Cancer","score_opus":0.05859588736409496,"score_gpt":0.40223665210265147,"score_spread":0.34364076473855654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280500423","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98998415,0.007185674,0.0000053394165,0.00033434524,0.00006738466,0.0013787057,0.0003998252,0.000008555956,0.0006360106],"genre_scores_gemma":[0.9935477,0.002031156,0.00013513681,0.0003055753,0.000022000047,0.00037084718,0.00054745784,0.000012094944,0.003028068],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99855083,0.00041847362,0.0003003493,0.00027693945,0.00010966385,0.00034374892],"domain_scores_gemma":[0.9991356,0.00023088447,0.000041620922,0.00025763354,0.00028464475,0.00004961812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010584738,0.00007865487,0.00036469178,0.00020721742,0.00016580436,0.0000014474867,0.000109967186,0.000052681837,0.000715831],"category_scores_gemma":[0.0004048632,0.00006698107,0.00011229071,0.00046461186,0.00017625501,0.00002250581,0.00014199727,0.00036349753,0.000020874968],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068091,0.0015838925,0.91171753,0.0016605213,0.00006535727,0.000008178017,0.00007515747,4.099296e-7,0.06059837,0.000061195264,0.02162535,0.0019231065],"study_design_scores_gemma":[0.021864433,0.028741684,0.67662024,0.0040875603,0.0003179343,0.00015505916,0.0008744993,0.000015328402,0.01307291,0.00045861024,0.25325564,0.0005361327],"about_ca_topic_score_codex":0.00004336889,"about_ca_topic_score_gemma":0.00003491741,"teacher_disagreement_score":0.23509733,"about_ca_system_score_codex":0.00029024013,"about_ca_system_score_gemma":0.00019294463,"threshold_uncertainty_score":0.78378475},"labels":[],"label_agreement":null},{"id":"W4280539175","doi":"10.1016/j.isci.2022.104432","title":"Functional analysis of the Candida albicans kinome reveals Hrr25 as a regulator of antifungal susceptibility","year":2022,"lang":"en","type":"article","venue":"iScience","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Research Council Canada; National Institutes of Health; Canadian Institutes of Health Research; Genome Canada; Canada Research Chairs; Canadian Institute for Advanced Research; Merck","keywords":"Kinome; Candida albicans; Echinocandins; Echinocandin; Caspofungin; Anidulafungin; Biology; Drug resistance; Antifungal drug; Kinase; Mediator; Casein kinase 1; Drug; Micafungin; Computational biology; Microbiology; Antifungal; Pharmacology; Protein kinase A; Amphotericin B; Genetics; Cell biology","score_opus":0.020708045629416433,"score_gpt":0.27880617565815674,"score_spread":0.2580981300287403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280539175","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99640787,0.0001966364,0.00010995924,0.0005341496,0.00016510193,0.00025180622,0.00013335265,0.000011592017,0.0021895333],"genre_scores_gemma":[0.9953148,0.0000042280326,0.00006782192,0.0002445223,0.00001957378,0.000010146223,0.000009723217,0.000004744037,0.004324491],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99763215,0.00015053865,0.00044447507,0.00043152703,0.0011104799,0.00023086107],"domain_scores_gemma":[0.9984265,0.00013564619,0.00024817645,0.00088341325,0.00021316181,0.00009307619],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012647405,0.000104733066,0.0004325071,0.00016873953,0.00027225996,0.0000061936576,0.00032929663,0.000033160428,0.0034169594],"category_scores_gemma":[0.00048490588,0.0000727046,0.0003793171,0.0028329107,0.00076931895,0.00007015711,0.00020670462,0.00019450561,0.0000028085065],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018365236,0.00018485916,0.845807,0.00003425501,0.00010246961,0.000002356885,0.00027196124,0.00026903648,0.15144126,0.00093602826,0.00046913163,0.00029796755],"study_design_scores_gemma":[0.00022808819,0.00017795872,0.99307424,0.000014197964,0.00035934025,0.0000059902795,0.000609093,0.00040671907,0.004446854,0.00023312849,0.00037447072,0.0000699234],"about_ca_topic_score_codex":0.0007140629,"about_ca_topic_score_gemma":0.00046657783,"teacher_disagreement_score":0.14726721,"about_ca_system_score_codex":0.00016103958,"about_ca_system_score_gemma":0.00060204987,"threshold_uncertainty_score":0.99749404},"labels":[],"label_agreement":null},{"id":"W4280594529","doi":"10.1111/ctr.14709","title":"Voriconazole therapeutic drug monitoring among lung transplant recipients receiving targeted therapy for invasive aspergillosis","year":2022,"lang":"en","type":"article","venue":"Clinical Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Centre Hospitalier de l’Université de Montréal; McGill University","funders":"","keywords":"Medicine; Voriconazole; Therapeutic drug monitoring; Discontinuation; Aspergillosis; Internal medicine; Retrospective cohort study; Surgery; Pharmacokinetics; Antifungal; Immunology","score_opus":0.05756011827456338,"score_gpt":0.3614385930545005,"score_spread":0.3038784747799371,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280594529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99372834,0.0008231111,0.002313664,0.000323973,0.0011592581,0.0011912516,0.00016041454,0.00010211959,0.00019789497],"genre_scores_gemma":[0.99318993,0.0045332187,0.00056589255,0.00032814645,0.00028571874,0.0002963217,0.00037409214,0.00004249459,0.0003841981],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975261,0.0003185951,0.00079270994,0.0005635694,0.000449658,0.0003493792],"domain_scores_gemma":[0.99798316,0.0012773591,0.0001753241,0.0002794227,0.00012322032,0.00016152776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001263392,0.00021264453,0.0004645376,0.000096350224,0.0004815433,0.000021358026,0.00016449892,0.00010818255,0.00018016702],"category_scores_gemma":[0.000092058195,0.00019491366,0.000415418,0.00026877588,0.00010360965,0.00015764653,0.00000906595,0.0004897722,0.0000047207927],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039061185,0.00041328766,0.9835893,0.00015850824,0.0001957439,0.000028946373,0.0016987433,0.000051560764,0.0046719466,0.000029256174,0.000085034415,0.00517158],"study_design_scores_gemma":[0.0037699714,0.0004926339,0.9874457,0.00016943047,0.00027933813,0.000007755081,0.00044663728,0.0003509273,0.006621651,0.00015372387,0.0000499981,0.00021222139],"about_ca_topic_score_codex":0.000040205916,"about_ca_topic_score_gemma":0.00003199703,"teacher_disagreement_score":0.0049593584,"about_ca_system_score_codex":0.00013091255,"about_ca_system_score_gemma":0.00013906723,"threshold_uncertainty_score":0.79483485},"labels":[],"label_agreement":null},{"id":"W4280625512","doi":"10.1016/j.idcr.2022.e01510","title":"Outcomes of caspofungin use in the treatment of Candida-related urinary tract infections, a case series","year":2022,"lang":"en","type":"article","venue":"IDCases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trillium Health Centre","funders":"","keywords":"Caspofungin; Fluconazole; Medicine; Urinary system; Echinocandins; Candida auris; Echinocandin; Antifungal; Voriconazole; Candida infections; Internal medicine; Intensive care medicine; Microbiology; Dermatology; Biology","score_opus":0.032765143752023856,"score_gpt":0.30581269419880824,"score_spread":0.2730475504467844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280625512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99809116,0.00096851576,6.1206924e-7,0.00020467033,0.000051176874,0.00035449586,0.00015550855,0.000012875575,0.0001609581],"genre_scores_gemma":[0.9990705,0.00013645663,0.000016814252,0.000034450513,0.0000063569687,0.00004862565,0.000020629284,0.000006707257,0.00065945403],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99922436,0.00009625103,0.0002832893,0.00012354548,0.00016161334,0.00011094603],"domain_scores_gemma":[0.99926436,0.00035328115,0.00007754001,0.00024910507,0.000029663266,0.000026073936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014387506,0.00009349904,0.00028991542,0.000097401346,0.00009084939,0.0000034907996,0.000030234236,0.000025005867,0.00023023399],"category_scores_gemma":[0.00010397767,0.00005951248,0.00012943885,0.000258139,0.00008179378,0.00006807894,0.000012380297,0.0000864567,9.626419e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033066087,0.005327122,0.98114026,0.00003261655,0.0000603003,0.010078203,0.0021745719,0.000024060342,0.00020509881,0.000083065446,0.00006892123,0.000475102],"study_design_scores_gemma":[0.0010683209,0.0053253486,0.97621185,0.000016089183,0.00012799648,0.009264254,0.006256634,0.000012631907,0.00036031785,0.000025263418,0.0012689941,0.00006231332],"about_ca_topic_score_codex":0.005169361,"about_ca_topic_score_gemma":0.0020493658,"teacher_disagreement_score":0.0049284413,"about_ca_system_score_codex":0.00010349934,"about_ca_system_score_gemma":0.00008807879,"threshold_uncertainty_score":0.7814562},"labels":[],"label_agreement":null},{"id":"W4281679216","doi":"10.3389/fcimb.2022.939140","title":"Editorial: Molecular Epidemiology of Fungal Infections","year":2022,"lang":"en","type":"editorial","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Natural Science Foundation of China; McMaster University","keywords":"Microbiology; Pathogenesis; Epidemiology; Biology; Medicine; Immunology; Pathology","score_opus":0.008603897216895924,"score_gpt":0.26965469949477505,"score_spread":0.26105080227787913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281679216","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.027826713,0.005739247,0.0035957787,0.000040993287,0.96168184,0.00045734897,0.00022064561,0.000042249478,0.000395199],"genre_scores_gemma":[0.02137193,0.005490108,0.00075056206,0.00008797639,0.9685154,0.00009010644,0.0027120826,0.00007376136,0.0009080801],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970618,0.0007590279,0.00087847136,0.000734172,0.00013642381,0.00043013747],"domain_scores_gemma":[0.9983042,0.00052689883,0.00039800693,0.0004372415,0.0002323684,0.00010132499],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0014775462,0.0003458174,0.0014449713,0.00055797986,0.00011474667,0.0000036753722,0.00010130172,0.0017036876,0.0002054443],"category_scores_gemma":[0.0022925583,0.00034773638,0.00033205465,0.00033842478,0.00048745688,0.000051315237,0.00014530032,0.0019140133,0.000004479376],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002567756,0.00022951089,0.24931121,0.00031036703,0.00014083202,0.000012480299,0.000028465842,0.000010092292,0.0077052913,0.000026470676,0.7417946,0.00017394527],"study_design_scores_gemma":[0.0013527455,0.00098682,0.0016289937,0.00007032436,0.00020883576,0.000018085802,0.000039252904,0.000010294091,0.000631815,0.00037198397,0.9944195,0.00026136285],"about_ca_topic_score_codex":0.000508091,"about_ca_topic_score_gemma":0.000057747962,"teacher_disagreement_score":0.25262493,"about_ca_system_score_codex":0.0003460783,"about_ca_system_score_gemma":0.00044600962,"threshold_uncertainty_score":0.9998975},"labels":[],"label_agreement":null},{"id":"W4281724946","doi":"10.2196/37275","title":"Bronchopulmonary Penetration of Isavuconazole in Pulmonary Transplant Recipients (PBISA01): Protocol for a Phase IV Clinical Trial With a Single Treatment Arm","year":2022,"lang":"en","type":"article","venue":"JMIR Research Protocols","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Bronchoalveolar lavage; Lung transplantation; Bronchoscopy; Voriconazole; Clinical trial; Lung; Surgery; Internal medicine; Dermatology; Antifungal","score_opus":0.5071444129909064,"score_gpt":0.6184405404768867,"score_spread":0.11129612748598028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281724946","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17398916,0.0000014240608,0.00003102804,0.00032120082,0.000007074332,0.82485086,0.000104199054,0.000025750709,0.000669289],"genre_scores_gemma":[0.21972065,3.3209548e-7,0.00024723625,0.000034594294,0.00014815318,0.7790278,0.000086519925,0.000031657535,0.0007030429],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99527276,0.00096307613,0.0010939024,0.0007530962,0.0012766367,0.00064052414],"domain_scores_gemma":[0.9980289,0.0005973051,0.00021956161,0.0006402619,0.00027645964,0.00023754494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030648874,0.00023343644,0.0006569514,0.0002842948,0.000249888,0.000026147101,0.00024904544,0.00012941768,0.00038970629],"category_scores_gemma":[0.00018301497,0.00017594485,0.00025051401,0.00059379474,0.00030434583,0.00014989662,0.000069045396,0.0006522478,0.0000036924894],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.8098083,0.069614835,0.08244394,0.00088293967,0.00004990607,0.0002787041,0.00039205517,0.0000074855216,0.009095057,0.000036114605,0.0011769908,0.026213635],"study_design_scores_gemma":[0.44452718,0.3260125,0.03589384,0.002714089,0.000024086845,0.000052420477,0.0006024681,0.001127284,0.0057643517,0.0003193312,0.18254746,0.00041499254],"about_ca_topic_score_codex":0.000053693777,"about_ca_topic_score_gemma":0.0001015028,"teacher_disagreement_score":0.36528113,"about_ca_system_score_codex":0.00064865086,"about_ca_system_score_gemma":0.0010359753,"threshold_uncertainty_score":0.71748227},"labels":[],"label_agreement":null},{"id":"W4281726928","doi":"10.3138/jammi-2021-0032","title":"<i>Aspergillus fumigatus</i>sternal osteomyelitis following cardiac surgery: Case report and literature review","year":2022,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Queen's University; McMaster University","funders":"","keywords":"Aspergillus fumigatus; Sternum; Osteomyelitis; Medicine; Cardiac surgery; Aspergillus; General surgery; Surgery; Microbiology; Biology; Immunology","score_opus":0.00393887429939701,"score_gpt":0.22762493086257496,"score_spread":0.22368605656317794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281726928","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9250735,0.058452338,0.0000015486021,0.014973261,0.0011617214,0.00013828522,0.00015055938,0.000002906271,0.000045846147],"genre_scores_gemma":[0.9886319,0.0074832547,0.0000023109344,0.0034179592,0.00016659674,0.000002994957,0.00002449924,0.0000056133968,0.0002648745],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982269,0.00050228706,0.0005651252,0.00012694973,0.00043018506,0.00014859503],"domain_scores_gemma":[0.9983277,0.00040040803,0.0006625881,0.00013335113,0.00020585395,0.00027014388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022898403,0.00009449466,0.00054164714,0.000040007584,0.00021581266,0.000007123233,0.00006585606,0.0000812777,0.00007412985],"category_scores_gemma":[0.0035639128,0.000065069595,0.00029843661,0.00016604927,0.000058190293,0.000043816002,0.00008685406,0.0005510812,4.3025285e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012279731,0.000044579494,0.89249206,0.0006410943,0.00049805746,0.0331338,0.000051277268,4.8107705e-7,0.00040941048,0.000019169293,0.071009465,0.001577819],"study_design_scores_gemma":[0.0027259267,0.0004038577,0.48669964,0.0072307065,0.002926319,0.23977454,0.00043311322,0.000006986144,0.00018254861,0.0001722744,0.2590176,0.00042649455],"about_ca_topic_score_codex":0.004721701,"about_ca_topic_score_gemma":0.009478946,"teacher_disagreement_score":0.40579242,"about_ca_system_score_codex":0.00040681788,"about_ca_system_score_gemma":0.0019259936,"threshold_uncertainty_score":0.71378314},"labels":[],"label_agreement":null},{"id":"W4281747822","doi":"10.1146/annurev-micro-041020-094524","title":"Genomic Approaches to Antifungal Drug Target Identification and Validation","year":2022,"lang":"en","type":"review","venue":"Annual Review of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canadian Institute for Advanced Research","keywords":"Cryptococcus neoformans; Computational biology; Biology; Drug discovery; Antifungal drug; Antifungal drugs; Candida albicans; Identification (biology); Antifungal; Drug; Drug development; Microbiology; Bioinformatics; Pharmacology","score_opus":0.08444321065010679,"score_gpt":0.3324629217201458,"score_spread":0.248019711070039,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281747822","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021210627,0.99589705,0.000037969217,0.0002875135,0.00017402158,0.0022442632,0.00085175,0.000020344478,0.00027497727],"genre_scores_gemma":[0.000080230784,0.99418205,0.00045355601,0.00036202473,0.00007762333,0.00013444904,0.0034111487,0.0000375186,0.0012614001],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970878,0.0005790654,0.0012476044,0.00071893167,0.00010489148,0.000261756],"domain_scores_gemma":[0.9983399,0.0002048784,0.0006325083,0.0006277599,0.00008998658,0.00010500425],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016446576,0.00035056815,0.0025067283,0.00018086235,0.00007945707,0.0000071623235,0.00024525073,0.0001773828,0.000592584],"category_scores_gemma":[0.00044827332,0.00027833116,0.00047753693,0.00034041618,0.00014370761,0.00005128221,0.0002267079,0.0003778613,0.00010060899],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032888074,0.00014379543,0.00008890156,0.32459143,0.0002302965,0.0000095937885,0.00012867448,5.4898067e-8,0.00072637893,0.00014721589,0.017896317,0.6560044],"study_design_scores_gemma":[0.000088927045,0.00010868115,0.00008536062,0.020158624,0.00093113515,0.00016059258,0.000056967616,7.5526415e-8,0.00006593525,0.000009547084,0.97812223,0.00021192257],"about_ca_topic_score_codex":0.000008559898,"about_ca_topic_score_gemma":0.0000020460393,"teacher_disagreement_score":0.96022594,"about_ca_system_score_codex":0.00013058145,"about_ca_system_score_gemma":0.00034904847,"threshold_uncertainty_score":0.99996686},"labels":[],"label_agreement":null},{"id":"W4281774503","doi":"10.3389/fcimb.2022.898619","title":"Pre-Exposure With Extracellular Vesicles From Aspergillus fumigatus Attenuates Inflammatory Response and Enhances Fungal Clearance in a Murine Model Pulmonary Aspergillosis","year":2022,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Universidade Federal de Minas Gerais; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Aspergillus fumigatus; Immune system; Immunology; Microbiology; Aspergillosis; Biology; Proinflammatory cytokine; Immunization; Inflammation","score_opus":0.005663218837934151,"score_gpt":0.20579058805541112,"score_spread":0.20012736921747695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281774503","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9824621,0.01560472,0.0010034838,0.00016682343,0.0001965634,0.00042384467,0.0000551909,0.000036486843,0.000050805487],"genre_scores_gemma":[0.99715954,0.0011825742,0.0008752939,0.00010823424,0.000038135335,0.00006187065,0.00008429733,0.00002615945,0.00046386578],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99809915,0.00042181005,0.00040222748,0.0006348591,0.00009882829,0.0003431034],"domain_scores_gemma":[0.99943703,0.000074084244,0.000110237124,0.00025422452,0.000037910355,0.00008651996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006030979,0.00024578485,0.000495093,0.00026979033,0.0001918828,0.000014592928,0.000069528214,0.00017507188,0.000053253036],"category_scores_gemma":[0.000044746273,0.00022658698,0.000060887178,0.000246878,0.00035099516,0.00013830156,0.00010304914,0.00057139294,0.0000014239342],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0071817343,0.00015652135,0.54914355,0.00005298739,0.00003575372,0.00013851316,0.00040529267,0.0004115279,0.44149378,0.000006379687,0.00006501426,0.00090894353],"study_design_scores_gemma":[0.0029175298,0.0010918505,0.93654704,0.00012026858,0.00006252481,0.0001670111,0.00088152237,0.0068249973,0.048785374,0.0002341202,0.0019653945,0.00040238173],"about_ca_topic_score_codex":0.00022031901,"about_ca_topic_score_gemma":0.00017662343,"teacher_disagreement_score":0.3927084,"about_ca_system_score_codex":0.00017190717,"about_ca_system_score_gemma":0.00009974906,"threshold_uncertainty_score":0.9239949},"labels":[],"label_agreement":null},{"id":"W4282923376","doi":"10.1016/j.vaccine.2022.05.057","title":"Recombinant Aspergillus fumigatus antigens Asp f 3 and Asp f 9 in liposomal vaccine protect mice against invasive pulmonary aspergillosis","year":2022,"lang":"en","type":"article","venue":"Vaccine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; McGill University; Small Business Innovation Research","keywords":"Aspergillus fumigatus; Medicine; Aspergillosis; Aspergillus; Adjuvant; Vaccination; Amphotericin B; Immunology; Antifungal; Microbiology; Biology; Dermatology","score_opus":0.01138659756356466,"score_gpt":0.23533417307966178,"score_spread":0.22394757551609712,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282923376","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98774856,0.004312093,0.0000057449433,0.0035938038,0.00035073073,0.001562156,0.000048808666,0.000118726646,0.002259372],"genre_scores_gemma":[0.9947279,0.0016952538,0.00022068407,0.0010660195,0.00015984055,0.00018556957,0.00013692159,0.00007390379,0.0017338987],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9966774,0.00025988434,0.00077251653,0.0009965728,0.0005421892,0.00075142947],"domain_scores_gemma":[0.99844486,0.0001851421,0.00019794055,0.00071098894,0.00014613266,0.00031494454],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007332555,0.00044386176,0.00090999453,0.00040543513,0.00041194123,0.00002834312,0.00024995793,0.0001613052,0.00071212725],"category_scores_gemma":[0.00044379896,0.0004010709,0.00019497144,0.00100308,0.000025661062,0.00019189723,0.0004411037,0.00096125447,0.000036839378],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032293655,0.0011796552,0.80560255,0.00042963077,0.00014914825,0.0021876562,0.00047190685,0.000035816927,0.17247415,0.00010827841,0.0013786071,0.012753233],"study_design_scores_gemma":[0.004569261,0.0015960764,0.97633743,0.0002595756,0.00011740527,0.0004119146,0.0011342582,0.0004899331,0.008550427,0.0002174972,0.005777479,0.00053873],"about_ca_topic_score_codex":0.0004021275,"about_ca_topic_score_gemma":0.0008264578,"teacher_disagreement_score":0.17073488,"about_ca_system_score_codex":0.00040330042,"about_ca_system_score_gemma":0.00029055783,"threshold_uncertainty_score":0.99984413},"labels":[],"label_agreement":null},{"id":"W4282963864","doi":"10.1093/jac/dkac161","title":"Molecular mechanisms of acquired antifungal drug resistance in principal fungal pathogens and EUCAST guidance for their laboratory detection and clinical implications","year":2022,"lang":"en","type":"review","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Center, University of Rochester; National Institutes of Health; Dr. Falk Pharma; Idorsia Pharmaceuticals; Wockhardt; TenNor Therapeutics; Astellas Foundation for Research on Metabolic Disorders; Radboud Universitair Medisch Centrum; Basilea Pharmaceutica; Astellas Pharma; North Bristol NHS Trust; University of Queensland; Shionogi; Meiji Seika Pharma; European Society of Clinical Microbiology and Infectious Diseases; Roivant Sciences; National University of Singapore; Nabriva Therapeutics; Pfizer; Melinta Therapeutics; Entasis Therapeutics; U.S. Food and Drug Administration; Amplyx; Achaogen; Albany College of Pharmacy and Health Sciences; GenePOC; University of Texas Southwestern Medical Center; Medicines Company; University of North Texas; Boston Pharmaceuticals; Novartis; Harvard University; F. Hoffmann-La Roche; Wayne State University; Pfizer Healthcare Ireland; Beth Israel Deaconess Medical Center; Bayer; Gilead Sciences; Insmed; Medpace; GlaxoSmithKline; Allergan; Cidara Therapeutics; University of Southern California; Tufts Medical Center","keywords":"Antifungal; Drug resistance; Microbiology; Antifungal drugs; Biology; Antifungal drug; Drug; Medicine; Pharmacology","score_opus":0.03514572353834217,"score_gpt":0.34232883999705416,"score_spread":0.307183116458712,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282963864","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12021264,0.87422013,0.0027959826,0.0004522491,0.0003026998,0.001540002,0.00042989614,0.000014678034,0.000031732343],"genre_scores_gemma":[0.040136613,0.9552344,0.004060781,0.0002556737,0.0001519174,0.000016190512,0.000015702866,0.000076026474,0.000052667998],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968633,0.00032329423,0.0018351377,0.00046896332,0.00022771921,0.00028155395],"domain_scores_gemma":[0.997193,0.0003767769,0.0015642787,0.00039072463,0.0003276456,0.00014761504],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0020451343,0.00037140315,0.0021568649,0.00026820833,0.00010741037,0.00002612986,0.00021022989,0.00029459468,0.00001698109],"category_scores_gemma":[0.00026698323,0.00030706162,0.0006899132,0.00040694608,0.0002283724,0.00010195813,0.00005509819,0.00045294536,1.8666731e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008128454,0.003198636,0.00488466,0.043489933,0.0023255015,0.0002878795,0.0009183767,0.0000014651637,0.3314024,0.00084640784,0.0017334648,0.60278285],"study_design_scores_gemma":[0.010198306,0.0017328293,0.011365907,0.017823966,0.0022767854,0.00082545524,0.0002716451,0.000017718916,0.023025028,0.0007646615,0.9304123,0.0012853907],"about_ca_topic_score_codex":0.0000022878226,"about_ca_topic_score_gemma":0.000046404137,"teacher_disagreement_score":0.9286789,"about_ca_system_score_codex":0.00017049264,"about_ca_system_score_gemma":0.00073630025,"threshold_uncertainty_score":0.99993813},"labels":[],"label_agreement":null},{"id":"W4282982497","doi":"10.1016/j.csbj.2022.06.030","title":"Population genomic analyses reveal evidence for limited recombination in the superbug <i>Candida auris</i> in nature","year":2022,"lang":"en","type":"article","venue":"Computational and Structural Biotechnology Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Faculty of Science, Prince of Songkla University; Natural Sciences and Engineering Research Council of Canada; McMaster University","keywords":"Biology; Clade; Genetics; Genome; Recombination; Phylogenetic tree; Population; Genetic diversity; Genetic variation; Evolutionary biology; Gene","score_opus":0.04962153394203868,"score_gpt":0.37004947278732786,"score_spread":0.3204279388452892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282982497","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98325056,0.0018059062,0.00027389935,0.0142463455,0.0001146479,0.00028068337,0.000011622998,0.000011713844,0.0000046467867],"genre_scores_gemma":[0.99777156,0.00008355061,0.0013209453,0.0006698677,0.000044490105,0.000012261742,0.00007705885,0.000004365536,0.00001588231],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999008,0.0001261534,0.00031452748,0.00019488015,0.00020651866,0.0001499154],"domain_scores_gemma":[0.9994537,0.0002700324,0.00010700515,0.00008027394,0.00006458647,0.000024401541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052682305,0.0000899066,0.00018896585,0.00027884432,0.00032619436,0.000024547053,0.00012316226,0.0001377875,0.000018560231],"category_scores_gemma":[0.0002666074,0.00006338382,0.000059314,0.00037314979,0.00007033291,0.00010384158,0.00003830735,0.0009177563,1.791782e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014525463,0.00006647436,0.95551926,0.00006748981,0.000045422257,0.000077606936,0.0005389512,0.006719233,0.009168567,0.0040508895,0.00061520154,0.021678362],"study_design_scores_gemma":[0.00092217413,0.0002492763,0.9465574,0.000034772547,0.000019737625,0.0005888044,0.0005007747,0.010089129,0.00006323937,0.040846743,0.000059337697,0.00006860664],"about_ca_topic_score_codex":0.000029992116,"about_ca_topic_score_gemma":0.000054653472,"teacher_disagreement_score":0.03679585,"about_ca_system_score_codex":0.00019549836,"about_ca_system_score_gemma":0.00007481593,"threshold_uncertainty_score":0.39872456},"labels":[],"label_agreement":null},{"id":"W4283073104","doi":"10.1093/mmy/myac046","title":"Aspergillosis in a colony of Humboldt penguins (<i>Spheniscus humboldti</i>) under managed care: a clinical and environmental investigation in a French zoological park","year":2022,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Aspergillus fumigatus; Aspergillosis; Biology; Incidence (geometry); Population; Microsatellite; Aspergillus; Zoology; Veterinary medicine; Ecology; Gene; Microbiology; Medicine; Immunology; Genetics; Environmental health","score_opus":0.019797419713243662,"score_gpt":0.29460487360007925,"score_spread":0.2748074538868356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283073104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956506,0.0009087285,0.000013106091,0.0019525551,0.00015141192,0.0005351666,0.000018624032,0.000016820959,0.00075299514],"genre_scores_gemma":[0.9969066,0.00028327972,0.00020102567,0.0022482022,0.00004933386,0.00012663376,0.000063685635,0.000011975464,0.00010927871],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9966754,0.0009821999,0.00086332136,0.00054542464,0.00058509945,0.0003486071],"domain_scores_gemma":[0.9987175,0.0006295034,0.0001147159,0.00025673056,0.00001392291,0.00026765934],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015426304,0.00015730203,0.00074210076,0.00014512619,0.00008033302,0.0000030753897,0.00016515503,0.00032910373,0.0021811381],"category_scores_gemma":[0.0010213469,0.0001386911,0.00010383406,0.00029309213,0.0011521693,0.000029939429,0.00039631195,0.0010399288,0.0000058883243],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041574586,0.0007184144,0.993267,0.00006810808,0.000027088907,0.0004967497,0.0008147167,0.000005322664,0.0013355585,0.00046597476,0.00035143812,0.0020338877],"study_design_scores_gemma":[0.0038049628,0.0013991867,0.98949814,0.000033018445,0.000051515024,0.000045214387,0.003133205,0.00019438729,0.000049133418,0.0011885414,0.00047894559,0.00012376814],"about_ca_topic_score_codex":0.00036658894,"about_ca_topic_score_gemma":0.0021189447,"teacher_disagreement_score":0.0037688727,"about_ca_system_score_codex":0.0002046645,"about_ca_system_score_gemma":0.00027196438,"threshold_uncertainty_score":0.998731},"labels":[],"label_agreement":null},{"id":"W4283121599","doi":"10.1093/cid/ciac476","title":"The<i>Staphylococcus aureus</i>Network Adaptive Platform Trial Protocol: New Tools for an Old Foe","year":2022,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre; McGill University Health Centre","funders":"Medical Research Council","keywords":"Medicine; Staphylococcus aureus; Protocol (science); Staphylococcal infections; Microbiology; Bacteria; Biology; Genetics; Pathology","score_opus":0.13016981955944742,"score_gpt":0.4209874548551737,"score_spread":0.29081763529572624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283121599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.686115,0.00050263095,0.0029836723,0.0008501446,0.003596643,0.2990143,0.00051978533,0.00095714245,0.0054606646],"genre_scores_gemma":[0.86153984,0.000037055666,0.000097251344,0.0029651509,0.0058937785,0.12487814,0.00013494113,0.000071630886,0.004382234],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99710405,0.0002719788,0.0009800871,0.00063819106,0.00044556617,0.00056013005],"domain_scores_gemma":[0.99467343,0.003393601,0.0003131931,0.0008036053,0.00017597686,0.00064018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012879517,0.00025347486,0.0006234406,0.000031359512,0.0011605296,0.00012794042,0.0002594173,0.00012574054,0.00025805153],"category_scores_gemma":[0.0026133733,0.00018268908,0.00080389285,0.00026611413,0.00028680626,0.0002350033,0.00015835662,0.000562398,0.00001655851],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.2630386,0.0070144353,0.24702433,0.00015466599,0.0006328699,0.0000424081,0.00014596806,0.00033882065,0.000020070433,0.0068614334,0.33252424,0.14220215],"study_design_scores_gemma":[0.11179447,0.047023546,0.1952237,0.000084231484,0.00077572634,0.0000035554174,0.0009579906,0.0008043958,0.000013326103,0.031170864,0.6114461,0.0007020813],"about_ca_topic_score_codex":0.00005036903,"about_ca_topic_score_gemma":0.0003664745,"teacher_disagreement_score":0.27892184,"about_ca_system_score_codex":0.00017626546,"about_ca_system_score_gemma":0.0011293531,"threshold_uncertainty_score":0.89259726},"labels":[],"label_agreement":null},{"id":"W4283514431","doi":"10.1038/s41467-022-31308-1","title":"Targeting fungal membrane homeostasis with imidazopyrazoindoles impairs azole resistance and biofilm formation","year":2022,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Occupational Cancer Research Centre; Hospital for Sick Children; McMaster University; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology; Canadian Institutes of Health Research; U.S. Department of Veterans Affairs; Genome Canada; National Institutes of Health; U.S. Department of Health and Human Services; Government of Canada; Canadian Institute for Advanced Research","keywords":"Biofilm; Azole; Homeostasis; Chemistry; Drug resistance; Microbiology; Biology; Antifungal; Cell biology; Bacteria; Genetics","score_opus":0.014976424703260017,"score_gpt":0.2790446921089079,"score_spread":0.2640682674056479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283514431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9418653,0.037964903,0.00015569461,0.014117034,0.00006296075,0.0007882809,0.00018674597,0.00018317733,0.004675881],"genre_scores_gemma":[0.99134743,0.0014574609,0.0058856714,0.0005661653,0.000024676805,0.00008581239,0.00033328272,0.000020196998,0.00027927186],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987981,0.00014885113,0.00025921882,0.00022571164,0.00035195216,0.00021620421],"domain_scores_gemma":[0.99826723,0.00018824247,0.00013629829,0.0011424696,0.00016998188,0.00009577253],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047736868,0.00014037294,0.00022687209,0.00011516794,0.0010663634,0.000030829015,0.0003362067,0.00009971695,0.000066307686],"category_scores_gemma":[0.00015171897,0.000120738834,0.00005632227,0.00047843513,0.00021335126,0.00020071547,0.0002878965,0.0011805707,0.0000035698597],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008053654,0.0028158897,0.71592534,0.0017998802,0.000716766,0.00012535867,0.011527596,0.00022353155,0.1131037,0.06040253,0.07168695,0.013618773],"study_design_scores_gemma":[0.005613999,0.0007261688,0.7450685,0.00037318937,0.00053965836,0.00029843504,0.026297797,0.0034638676,0.010260021,0.00042977027,0.20583856,0.0010900226],"about_ca_topic_score_codex":0.000015904918,"about_ca_topic_score_gemma":0.000569416,"teacher_disagreement_score":0.13415161,"about_ca_system_score_codex":0.00014643243,"about_ca_system_score_gemma":0.00011337904,"threshold_uncertainty_score":0.8201713},"labels":[],"label_agreement":null},{"id":"W4284668081","doi":"10.1371/journal.ppat.1010681","title":"Serum bridging molecules drive candidal invasion of human but not mouse endothelial cells","year":2022,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Clinical and Translational Science Institute, University of California, Los Angeles; National Center for Advancing Translational Sciences; National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Biology; Candida albicans; Microbiology; Endothelial stem cell; Endocytosis; Vitronectin; Cell biology; Candida glabrata; Receptor; Integrin; In vitro; Biochemistry","score_opus":0.024135294206567483,"score_gpt":0.25167153542192355,"score_spread":0.22753624121535607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4284668081","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99729633,0.000043991215,0.00008835552,0.000103719816,0.000071817674,0.00035734795,0.001171698,0.00005300114,0.0008137576],"genre_scores_gemma":[0.9971955,0.000018912824,0.00023151992,0.00030838666,0.00010108071,0.00002311918,0.000057981673,0.000031856995,0.0020316835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99838954,0.0001084839,0.000317929,0.00034039852,0.0005546041,0.00028902033],"domain_scores_gemma":[0.99921834,0.0000460497,0.00012252957,0.00040556182,0.000086306565,0.00012118695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020807827,0.00015055311,0.00035502575,0.00009472993,0.00025982587,0.000007569007,0.00012815197,0.000047165755,0.00048740566],"category_scores_gemma":[0.000073134994,0.00014594199,0.00016960246,0.00012988316,0.00008836457,0.00003547262,0.00015426322,0.0002670027,0.00001761786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021884454,0.00032322487,0.051500592,0.00011621638,0.000043624408,0.00013596151,0.0006352498,0.000016040703,0.9466766,0.00007586379,0.00010747421,0.00015030037],"study_design_scores_gemma":[0.0008884628,0.00045695316,0.020680357,0.000037029953,0.000110671936,0.00000936085,0.0009761208,0.00021236406,0.9763467,0.000021304346,0.00011550737,0.00014518986],"about_ca_topic_score_codex":0.00011603037,"about_ca_topic_score_gemma":0.00007419921,"teacher_disagreement_score":0.030820237,"about_ca_system_score_codex":0.00012700142,"about_ca_system_score_gemma":0.0001345594,"threshold_uncertainty_score":0.5951342},"labels":[],"label_agreement":null},{"id":"W4284895952","doi":"10.3390/ijms23147555","title":"Transcriptional Profiling of the Candida albicans Response to the DNA Damage Agent Methyl Methanesulfonate","year":2022,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada; National Natural Science Foundation of China","keywords":"Candida albicans; DNA damage; Biology; Corpus albicans; Methyl methanesulfonate; DNA repair; Gene; DNA; Transcription (linguistics); Transcription factor; Transcriptional regulation; Genetics; Cell biology; Molecular biology","score_opus":0.025985323508612053,"score_gpt":0.32172462979246186,"score_spread":0.2957393062838498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4284895952","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97355235,0.0004119408,0.001691833,0.023065055,0.00072018267,0.00015649224,0.000031499785,0.0000022441247,0.00036841],"genre_scores_gemma":[0.99684185,0.000011091204,0.0011603574,0.0016659466,0.00005326312,0.000005489163,8.793516e-7,0.000004126647,0.00025702486],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99700326,0.00040925606,0.00037339138,0.00013570025,0.0019588915,0.000119493496],"domain_scores_gemma":[0.9990109,0.00016328236,0.00023681828,0.00014710243,0.0003788769,0.0000629722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036564844,0.0000707044,0.00014355825,0.0001477429,0.00018696777,0.000025109355,0.00088620954,0.000014168941,0.0001833453],"category_scores_gemma":[0.00057182944,0.000038319075,0.00023779798,0.00039369083,0.00023584848,0.00006821842,0.000115883835,0.00023827955,0.0000010283264],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016994531,0.000104288025,0.0049263686,0.0000045662214,0.00011803488,0.00010841992,0.0010520517,0.003824188,0.98530865,0.0018025948,0.00017028052,0.0008811152],"study_design_scores_gemma":[0.0023037747,0.0019103201,0.38777986,0.00022252832,0.00022775515,0.0009968267,0.009415216,0.0010053144,0.562894,0.0025800162,0.030409766,0.00025462973],"about_ca_topic_score_codex":0.000038151305,"about_ca_topic_score_gemma":0.00002153831,"teacher_disagreement_score":0.42241463,"about_ca_system_score_codex":0.00013040681,"about_ca_system_score_gemma":0.0006904753,"threshold_uncertainty_score":0.20075025},"labels":[],"label_agreement":null},{"id":"W4285259964","doi":"10.1007/978-1-0716-2417-3_9","title":"Downregulation of Essential Genes in the Fungal Pathogen Candida auris","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Candida auris; Gene; Fungal pathogen; Pathogen; Genome; Antifungal drug; Function (biology); Human pathogen; Genetics; Microbiology; Identification (biology); Opportunistic pathogen; Computational biology; Antifungal; Virulence","score_opus":0.01971541429223571,"score_gpt":0.39816969892226994,"score_spread":0.3784542846300342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285259964","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8393775,0.0013408861,0.1581275,0.0003344382,0.00007984755,0.00029068452,0.000015772364,0.0000054904212,0.00042788032],"genre_scores_gemma":[0.91539663,0.000023158038,0.084160455,0.00026351743,0.000023119188,0.000049623042,0.000039745213,0.000006708897,0.000037030786],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.996933,0.0022423367,0.00029668075,0.00022918406,0.00012527392,0.00017352447],"domain_scores_gemma":[0.9994042,0.00017232013,0.00007181112,0.00030677285,0.000026798498,0.000018091321],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002474379,0.00008120126,0.00025867953,0.00012274514,0.00004129286,0.0000019919482,0.00013642262,0.000071675655,0.00013666305],"category_scores_gemma":[0.0002418517,0.000060481965,0.0000864537,0.00035533943,0.00010926453,0.000008751809,0.0000782208,0.00022208161,4.629335e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001889606,0.00009096257,0.15299824,0.000020025082,0.000011518875,0.000065198634,0.00032797092,0.0000575084,0.8306932,0.0014365538,0.000009357685,0.014100507],"study_design_scores_gemma":[0.0021451833,0.000863742,0.76340854,0.000021682716,0.00009279282,0.00009285024,0.0019736758,0.0010321034,0.21227863,0.012466428,0.005368056,0.000256338],"about_ca_topic_score_codex":0.00024638302,"about_ca_topic_score_gemma":0.00011014477,"teacher_disagreement_score":0.6184146,"about_ca_system_score_codex":0.00005378667,"about_ca_system_score_gemma":0.00008388506,"threshold_uncertainty_score":0.2466383},"labels":[],"label_agreement":null},{"id":"W4285736613","doi":"10.1016/j.rx.2022.06.006","title":"Espectro de coinfecciones pulmonares fúngicas oportunistas en COVID-19: lo que el radiólogo debe saber","year":2022,"lang":"es","type":"article","venue":"Radiología","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Immunosuppression; Mucormycosis; Medicine; Coronavirus disease 2019 (COVID-19); Dermatology; Aspergillosis; Aspergillus fumigatus; Lung; Intensive care medicine; Disease; Immunology; Pathology; Infectious disease (medical specialty); Internal medicine","score_opus":0.02124136452231603,"score_gpt":0.33046451125637877,"score_spread":0.30922314673406276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285736613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9297912,0.027277764,0.002523586,0.021961553,0.0011914315,0.0016716727,0.0008418309,0.000457289,0.014283649],"genre_scores_gemma":[0.98016447,0.0031618353,0.00033305452,0.007907319,0.00096418825,0.00016381252,0.00047223095,0.00008970376,0.0067433985],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9942404,0.0016082579,0.00090028386,0.0012055372,0.0007171594,0.0013283701],"domain_scores_gemma":[0.9957137,0.0014379711,0.00035442814,0.0012551388,0.00010834578,0.0011303794],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0024936895,0.00062043255,0.0011982615,0.00025945858,0.0011477561,0.0000965909,0.00067309575,0.00039659347,0.010385206],"category_scores_gemma":[0.0026833697,0.0005864091,0.0005305214,0.0005122076,0.00072427315,0.00015055668,0.0003675538,0.0014109667,0.00018989932],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034271902,0.001536229,0.8066797,0.0008806119,0.00070964586,0.0067715384,0.0028034071,0.00035380153,0.01626177,0.06025418,0.097695254,0.0026266647],"study_design_scores_gemma":[0.00306553,0.0015867316,0.22784743,0.000083192295,0.00056069676,0.0018160148,0.004735289,0.0011468789,0.00040199212,0.0044626356,0.75335723,0.00093637494],"about_ca_topic_score_codex":0.0008745845,"about_ca_topic_score_gemma":0.00013152133,"teacher_disagreement_score":0.655662,"about_ca_system_score_codex":0.002722755,"about_ca_system_score_gemma":0.002947582,"threshold_uncertainty_score":0.9996587},"labels":[],"label_agreement":null},{"id":"W4285743146","doi":"10.1371/journal.pone.0268823","title":"Predictors and outcomes of peritoneal dialysis-related infections due to filamentous molds (MycoPDICS)","year":2022,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"Thailand Science Research and Innovation; National Research Council of Thailand; Khon Kaen University; Chulalongkorn University","keywords":"Medicine; Peritoneal dialysis; Peritonitis; Hazard ratio; Internal medicine; Proportional hazards model; Gastroenterology; Confidence interval; Surgery","score_opus":0.01970972303043851,"score_gpt":0.24810251735580227,"score_spread":0.22839279432536375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285743146","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973537,0.00016382293,0.000013349755,0.0006368581,0.00004740277,0.0004147627,0.00007601498,0.00005735375,0.0012367581],"genre_scores_gemma":[0.9970347,0.00004502508,0.00019475038,0.0001782926,0.000023129061,0.000062806444,0.000031740885,0.000014403117,0.0024151327],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99880403,0.00005796043,0.00028916015,0.00022895941,0.00045412846,0.00016574195],"domain_scores_gemma":[0.9993553,0.000087686014,0.000061544706,0.0002778062,0.000074124844,0.00014352395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020019477,0.000102312115,0.00044167085,0.00013028349,0.0001507275,0.0000065575728,0.000055639517,0.000044585347,0.0008990758],"category_scores_gemma":[0.00021984414,0.00009531911,0.000083957355,0.0003257048,0.00006998823,0.00003777179,0.00008492576,0.00020388857,0.0000092786],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011614084,0.0023221443,0.9599884,0.00010358918,0.0006202837,0.00002120136,0.0012896236,0.000011151951,0.035064835,0.000080575985,0.0001797573,0.0002022544],"study_design_scores_gemma":[0.0007418499,0.00092463323,0.99325883,0.000043697382,0.0005858618,0.0000065405743,0.00057077914,0.00015050395,0.0034158493,0.00005846127,0.00013714634,0.00010586937],"about_ca_topic_score_codex":0.00012892764,"about_ca_topic_score_gemma":0.00006310256,"teacher_disagreement_score":0.033270366,"about_ca_system_score_codex":0.00009171816,"about_ca_system_score_gemma":0.000058493064,"threshold_uncertainty_score":0.984425},"labels":[],"label_agreement":null},{"id":"W4286491720","doi":"10.1101/2022.07.20.500774","title":"<i>Candida albicans</i> exhibits heterogeneous and adaptive cytoprotective responses to anti-fungal compounds","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Western University","funders":"","keywords":"Candida albicans; Transcriptome; Corpus albicans; Ribosome profiling; Downregulation and upregulation; Biology; Cell biology; Fluconazole; Ribosome; Microbiology; Biochemistry; Gene expression; RNA; Antifungal; Gene","score_opus":0.019386322441171295,"score_gpt":0.25132042722867115,"score_spread":0.23193410478749985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4286491720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929897,0.0017884421,0.00056447025,0.00044038915,0.00052908255,0.002349229,0.0009196933,0.00035692807,0.00006202556],"genre_scores_gemma":[0.99524045,0.00023222704,0.0023824081,0.0010899743,0.00033265378,0.0004828037,8.7177216e-7,0.00016859504,0.00006999804],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99536204,0.00041101532,0.0006802757,0.0018868751,0.0008507098,0.0008090552],"domain_scores_gemma":[0.9965577,0.00021170775,0.00032724495,0.0016304314,0.0005325464,0.0007403559],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009181816,0.00079959637,0.001296913,0.00041281764,0.00046091955,0.00015355511,0.00040129526,0.0004693302,0.00020416676],"category_scores_gemma":[0.00050943723,0.00083952653,0.0002776513,0.00063376105,0.00031586326,0.0001056542,0.0010862657,0.0015524275,0.00003120529],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043624463,0.00052903104,0.17387965,0.0007350917,0.0006497323,0.0015813326,0.0001090813,0.000061510254,0.8172317,0.00021405402,0.000637151,0.0000092149285],"study_design_scores_gemma":[0.0015276553,0.001240803,0.7979051,0.0007607587,0.0004145194,9.2604006e-7,0.000053030533,0.00011744184,0.18916227,0.0000049290766,0.007456938,0.0013556426],"about_ca_topic_score_codex":0.00023134986,"about_ca_topic_score_gemma":0.000024850682,"teacher_disagreement_score":0.6280694,"about_ca_system_score_codex":0.0008345327,"about_ca_system_score_gemma":0.0012639746,"threshold_uncertainty_score":0.99940556},"labels":[],"label_agreement":null},{"id":"W4287325710","doi":"10.5281/zenodo.6385264","title":"Clinical Accuracy and Impact of Plasma Cell-Free DNA Fungal Polymerase Chain Reaction Panel for Noninvasive Diagnosis of Fungal Infection","year":2021,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European and Developing Countries Clinical Trials Partnership; South African Medical Research Council; Medical Research Council; Stanford University Center for Innovation in Global Health; Chemistry, Engineering and Medicine for Human Health, Stanford University; Canadian Institutes of Health Research","keywords":"Polymerase chain reaction; DNA; Medicine; Biology; Gene; Genetics","score_opus":0.06369652435441062,"score_gpt":0.32639862671636904,"score_spread":0.26270210236195846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4287325710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99478424,0.00015382624,0.00047346088,0.00024516854,0.00007092404,0.00052028,0.00041862723,0.00009010578,0.0032434005],"genre_scores_gemma":[0.9975578,0.00093549886,0.00016922093,0.000033234388,0.00013465056,1.9101535e-7,0.00055900746,0.0003046533,0.0003057197],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982483,0.0003101334,0.000500876,0.00039756778,0.0002962139,0.0002469563],"domain_scores_gemma":[0.9976777,0.0003101246,0.00026502938,0.0005063801,0.0010407782,0.00019999164],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008075946,0.00013973271,0.00035158807,0.00013996342,0.00042019683,0.0000655704,0.00017003548,0.00012247347,0.0012767108],"category_scores_gemma":[0.0057216994,0.00013334873,0.00021738964,0.0003677037,0.00021174268,0.0001934804,0.0003318212,0.00025364867,0.0000596395],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0064017805,0.003951508,0.1119091,0.0023431415,0.0007161712,0.00013888079,0.0020809264,0.000021002257,0.53009707,0.0007055274,0.077248216,0.26438668],"study_design_scores_gemma":[0.0078017707,0.0052873464,0.6858353,0.0003569858,0.00036863625,0.00039104305,0.0010229961,0.00059199816,0.24501069,0.00014058565,0.052802306,0.00039034887],"about_ca_topic_score_codex":0.00007584041,"about_ca_topic_score_gemma":0.0000047413405,"teacher_disagreement_score":0.5739262,"about_ca_system_score_codex":0.00012840741,"about_ca_system_score_gemma":0.000045590405,"threshold_uncertainty_score":0.99963623},"labels":[],"label_agreement":null},{"id":"W4288038380","doi":"10.1093/g3journal/jkac156","title":"Acquisition of cross-azole tolerance and aneuploidy in <i>Candida albicans</i> strains evolved to posaconazole","year":2022,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Posaconazole; Biology; Candida albicans; Azole; Drug resistance; Antifungal drug; Fluconazole; Aneuploidy; Genetics; Cross-resistance; Strain (injury); Corpus albicans; Microbiology; Itraconazole; Antifungal; Gene; Chromosome","score_opus":0.015278567476730703,"score_gpt":0.2922628434177551,"score_spread":0.27698427594102437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288038380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9082707,0.090117425,0.00010759309,0.00025749882,0.000097570315,0.00050184544,0.00017771371,0.00001833038,0.00045132954],"genre_scores_gemma":[0.99184066,0.0054880073,0.0011282682,0.0008087859,0.00007138486,0.00004518674,0.000054033564,0.000025161213,0.00053852407],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99840206,0.000056789966,0.00042131008,0.00041502956,0.00036705608,0.00033772824],"domain_scores_gemma":[0.9991931,0.000028107732,0.00008843244,0.00041190174,0.00011207537,0.00016640117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026256999,0.00017139169,0.00036982234,0.00013265669,0.00012520634,0.000017089837,0.00014555412,0.000057573572,0.00036018906],"category_scores_gemma":[0.000004616507,0.00018567954,0.00007344146,0.00035822825,0.00014276768,0.000037331334,0.00016252667,0.00015126546,0.000004752576],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042913485,0.000185781,0.66479087,0.00015675748,0.000023583105,0.000028464554,0.0010291598,0.0031684274,0.22758564,0.000038387305,0.0000726062,0.102491185],"study_design_scores_gemma":[0.001738943,0.00095576287,0.95816195,0.000028354625,0.000044329758,0.000028178245,0.0011446076,0.0007570952,0.015308299,0.00014304114,0.021408735,0.00028071707],"about_ca_topic_score_codex":0.00006437719,"about_ca_topic_score_gemma":0.00019849927,"teacher_disagreement_score":0.29337105,"about_ca_system_score_codex":0.000116050825,"about_ca_system_score_gemma":0.00017900243,"threshold_uncertainty_score":0.7571792},"labels":[],"label_agreement":null},{"id":"W4288068442","doi":"10.3390/ijerph19159146","title":"Knowledge, Attitudes, and Practices concerning Black Fungus during COVID-19 Pandemic among Students of Bangladesh: An Online-Based Cross-Sectional Survey","year":2022,"lang":"en","type":"article","venue":"International Journal of Environmental Research and Public Health","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Waterloo","funders":"","keywords":"Snowball sampling; Residence; Cross-sectional study; Pandemic; Medicine; Coronavirus disease 2019 (COVID-19); Mass media; Demography; Environmental health; Family medicine; Advertising; Disease; Sociology; Pathology","score_opus":0.28885726947555684,"score_gpt":0.5234624190046487,"score_spread":0.2346051495290919,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288068442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99757856,0.0011564632,0.000033219403,0.00054823526,0.000102557126,0.00020132486,0.0003428178,0.0000049007695,0.000031897544],"genre_scores_gemma":[0.9980321,0.0011608328,0.0000610086,0.00020647391,0.00015674178,0.0000042581264,0.00016163671,0.000011895889,0.00020507608],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99598783,0.00092084333,0.0006051838,0.0002758045,0.0019033229,0.00030704006],"domain_scores_gemma":[0.9974446,0.0007929823,0.0006199346,0.00012485335,0.00021596924,0.0008016473],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0073161563,0.00010077889,0.00024803623,0.00034485405,0.00037416557,0.00010966951,0.00031934542,0.000047635902,0.0006543537],"category_scores_gemma":[0.001674146,0.00009259564,0.00005311842,0.0001272842,0.0007001726,0.00038456608,0.00027206607,0.0008345133,0.0000010190894],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016670024,0.0021571761,0.9936468,0.0001143108,0.00012746466,0.00005693838,0.00043832362,0.000040610248,0.00088164373,0.000008228167,0.000035208457,0.0008262946],"study_design_scores_gemma":[0.0024346656,0.0014111189,0.9935086,0.000026224508,0.0000027893643,0.0001594855,0.0013679863,0.00010936045,0.000013448209,0.000021710957,0.0008839828,0.000060651702],"about_ca_topic_score_codex":0.0005711391,"about_ca_topic_score_gemma":0.0006279171,"teacher_disagreement_score":0.0056420104,"about_ca_system_score_codex":0.00133543,"about_ca_system_score_gemma":0.0015978544,"threshold_uncertainty_score":0.71647143},"labels":[],"label_agreement":null},{"id":"W4288077178","doi":"10.1111/myc.13507","title":"Genotypic diversity and antifungal susceptibility of <i>Scedosporium</i> species from clinical settings in China","year":2022,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Natural Science Foundation of China","keywords":"Scedosporium apiospermum; Multilocus sequence typing; Voriconazole; Genetic diversity; Biology; Antifungal; Microbiology; Genotype; Medicine; Population; Genetics; Environmental health; Gene","score_opus":0.02826848674193387,"score_gpt":0.2829440639812296,"score_spread":0.25467557723929574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288077178","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99721575,0.0007562333,0.000012066886,0.0002924426,0.00017701914,0.00027144366,0.0001921183,0.00003209829,0.0010508237],"genre_scores_gemma":[0.9986577,0.00018126109,0.00026305782,0.00028062664,0.00008241403,0.0000029292455,0.0000455204,0.000009663159,0.0004768371],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99818623,0.00020090907,0.00050107605,0.0004893773,0.00039290634,0.00022949318],"domain_scores_gemma":[0.99899936,0.0002890706,0.00013960587,0.00041493663,0.000052740204,0.00010430216],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010476555,0.00014088956,0.000554236,0.00006482753,0.0003380754,0.0000059571757,0.00014887187,0.00007179886,0.000979619],"category_scores_gemma":[0.0004241239,0.00013357677,0.00014620529,0.0002257904,0.00030654666,0.00007699785,0.0009485598,0.00046219144,0.000003801477],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009680443,0.00046236362,0.98710823,0.00008182698,0.00002916833,0.00005160335,0.0010175887,0.0000016259937,0.008287316,0.00005949869,0.00090570207,0.0010270118],"study_design_scores_gemma":[0.0011274626,0.00033835354,0.9942178,0.000029147437,0.00005641711,0.000003238563,0.0011719901,0.000024430383,0.0012938422,0.00041338592,0.0012079822,0.00011590845],"about_ca_topic_score_codex":0.001193909,"about_ca_topic_score_gemma":0.0005790946,"teacher_disagreement_score":0.0071095913,"about_ca_system_score_codex":0.000090345726,"about_ca_system_score_gemma":0.00008589103,"threshold_uncertainty_score":0.9999336},"labels":[],"label_agreement":null},{"id":"W4288515040","doi":"10.3389/fmars.2022.962857","title":"Risk factor determination and qualitative risk assessment of Mucormycosis in Harbor Porpoise, an emergent fungal disease in Salish Sea marine mammals","year":2022,"lang":"en","type":"article","venue":"Frontiers in Marine Science","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture; Ministry of Health","funders":"Karen C. Drayer Wildlife Health Center","keywords":"Porpoise; Mucormycosis; Biology; Risk factor; Zoology; Internal medicine; Pathology; Medicine","score_opus":0.01594953755623993,"score_gpt":0.33454783073829847,"score_spread":0.31859829318205857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288515040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980334,0.00005263711,0.0004327139,0.00012531543,0.00025297716,0.0006154009,0.00024349993,0.000012125928,0.000231955],"genre_scores_gemma":[0.9805068,0.00025335504,0.018966924,0.000039106617,0.000013204007,0.00007123836,0.000029623528,0.0000107443475,0.00010899742],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99700457,0.00054998853,0.00058799895,0.00063834945,0.00085058925,0.0003684875],"domain_scores_gemma":[0.99889064,0.00009478974,0.00027022092,0.0003890687,0.00012168819,0.00023357588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003358606,0.00016703438,0.00040728977,0.00067027524,0.00013934224,0.000022202386,0.0002500889,0.00003269883,0.00023914115],"category_scores_gemma":[0.0011232784,0.00016346695,0.000052415457,0.0013078521,0.00041073118,0.0004653475,0.00052464346,0.00043797467,2.3047755e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047977176,0.00046361558,0.9752719,0.00007245766,0.0000058801747,0.0000497962,0.0015946149,0.0001187389,0.00034875606,0.000043931952,0.000031070973,0.02151947],"study_design_scores_gemma":[0.001092138,0.00032377112,0.96575695,0.000024458413,0.00002414961,5.633563e-7,0.0039673825,0.027388893,0.00010028362,0.0011449325,0.000020194255,0.00015629762],"about_ca_topic_score_codex":0.0023409633,"about_ca_topic_score_gemma":0.0016674757,"teacher_disagreement_score":0.027270153,"about_ca_system_score_codex":0.00066228607,"about_ca_system_score_gemma":0.00046880418,"threshold_uncertainty_score":0.66659886},"labels":[],"label_agreement":null},{"id":"W4291002011","doi":"10.51731/cjht.2022.415","title":"Normal Immunoglobulin (Human) 10% and Recombinant Human Hyaluronidase (HyQvia)","year":2022,"lang":"en","type":"article","venue":"Canadian Journal of Health Technologies","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Reimbursement; Hyaluronidase; Recombinant DNA; Antibody; Medicine; Drug; Human immunodeficiency virus (HIV); Immunology; Pharmacology; Chemistry; Enzyme; Political science; Biochemistry","score_opus":0.028845260575301228,"score_gpt":0.3002388141577398,"score_spread":0.27139355358243855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4291002011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9505329,0.03172396,0.000011162978,0.016865171,0.00018353993,0.0002207916,0.000016439168,0.000057768662,0.00038823028],"genre_scores_gemma":[0.9982893,0.00016523257,0.00014065864,0.0003957596,0.000009663597,0.0000066845287,0.000007149607,0.000013942985,0.00097164663],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9983835,0.00009302444,0.0006270871,0.00017682985,0.00022708556,0.00049246434],"domain_scores_gemma":[0.9990186,0.000028748182,0.00035243723,0.00032078882,0.00012303944,0.00015636669],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011650373,0.00013320263,0.00046096215,0.00044036188,0.0011751025,0.000024786388,0.00025449556,0.00008166938,0.0004731072],"category_scores_gemma":[0.00025749812,0.000118933305,0.00009207724,0.00024945434,0.0003246043,0.00008726427,0.000066907036,0.000850392,0.000004747867],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043596313,0.00035858664,0.35763046,0.0009217366,0.00022407745,0.0038092025,0.0017632301,0.000014182974,0.0030353183,0.007009535,0.048634164,0.57616353],"study_design_scores_gemma":[0.0030665055,0.009019714,0.5154628,0.00039870947,0.0000696364,0.0022286247,0.022087444,0.000009395617,0.00058687123,0.00700692,0.43964797,0.00041538617],"about_ca_topic_score_codex":0.0044924547,"about_ca_topic_score_gemma":0.0038156523,"teacher_disagreement_score":0.57574815,"about_ca_system_score_codex":0.0007381073,"about_ca_system_score_gemma":0.0019378631,"threshold_uncertainty_score":0.90380573},"labels":[],"label_agreement":null},{"id":"W4291915012","doi":"10.1101/2022.08.15.501889","title":"Development and applications of a CRISPR activation system for facile genetic overexpression in <i>Candida albicans</i>","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs; University of Guelph; University of Notre Dame; University of Minnesota; Canadian Institute for Advanced Research; Saint Louis University; Burroughs Wellcome Fund","keywords":"Candida albicans; Biology; CRISPR; Gene; Antifungal drug; Corpus albicans; RNA; Virulence; Computational biology; Cas9; Phenotype; Genetics","score_opus":0.014924510956764895,"score_gpt":0.2471661777703625,"score_spread":0.23224166681359762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4291915012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9807426,0.00047886075,0.015974153,0.000035747642,0.000064258726,0.002398477,0.00021372912,0.00007448043,0.000017747998],"genre_scores_gemma":[0.9861857,0.000054269894,0.011685912,0.000042274758,0.00007207797,0.0019043179,0.000002194854,0.000043006068,0.000010203892],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981465,0.000052249503,0.0005784482,0.0006532728,0.00032296462,0.00024660482],"domain_scores_gemma":[0.9985983,0.00007511586,0.0003283396,0.0006452341,0.00022738102,0.00012562852],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00036970235,0.00025307236,0.00051389914,0.00019978486,0.00011933055,0.000022641345,0.00014654918,0.00022130461,0.00002783673],"category_scores_gemma":[0.00008514972,0.00026191262,0.000074998294,0.00027025165,0.00005724509,0.00004521954,0.00020621018,0.00033305903,0.0000012725853],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002916036,0.00024174422,0.063062735,0.0067951693,0.00007180931,0.0000049649457,0.00005567907,0.000034440553,0.9290247,0.00030906202,0.00007329854,0.000034789282],"study_design_scores_gemma":[0.0011317054,0.00006487926,0.43926597,0.0020419762,0.0000753815,1.4518636e-8,0.000100012876,0.00017411432,0.54413676,0.0000016217349,0.012651858,0.00035573335],"about_ca_topic_score_codex":0.00006283916,"about_ca_topic_score_gemma":0.0000042647744,"teacher_disagreement_score":0.38488796,"about_ca_system_score_codex":0.0005254575,"about_ca_system_score_gemma":0.00080195244,"threshold_uncertainty_score":0.9999833},"labels":[],"label_agreement":null},{"id":"W4292596008","doi":"10.3389/fimmu.2022.883638","title":"Interferon gamma as an immune modulating adjunct therapy for invasive mucormycosis after severe burn – A case report","year":2022,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Hospices Civils de Lyon","keywords":"Mucormycosis; Immune system; Medicine; Immunology; Interferon gamma; Surgery","score_opus":0.015204059363456732,"score_gpt":0.27297276639084495,"score_spread":0.2577687070273882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292596008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893455,0.005710776,0.0018121885,0.00034006877,0.0012788097,0.0011083927,0.000030624356,0.000049738246,0.0003239001],"genre_scores_gemma":[0.99322236,0.00017571491,0.003555333,0.00037985624,0.00006870117,0.00070822384,0.00015259709,0.00004655266,0.0016906405],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99786526,0.00022916571,0.0006313182,0.0006100682,0.0001803542,0.00048384536],"domain_scores_gemma":[0.99871457,0.000092802926,0.00021156512,0.0007894947,0.0001246767,0.00006688913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006592768,0.00024109115,0.0006292931,0.0002560857,0.00022973627,0.0000141948285,0.00017852709,0.00015971412,0.00048506854],"category_scores_gemma":[0.00035115122,0.00023246075,0.00021250124,0.00025592698,0.00016602543,0.00015732898,0.00015151521,0.0005474767,0.0000038107255],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.05548824,0.0016301926,0.7335933,0.00020399898,0.0010576403,0.08297532,0.010595857,0.00006740056,0.03524521,0.000102769365,0.0037112,0.075328864],"study_design_scores_gemma":[0.033959296,0.03208505,0.5617867,0.00046420883,0.00047279874,0.16064842,0.14895417,0.0030189801,0.018391049,0.011544336,0.026089689,0.0025852828],"about_ca_topic_score_codex":0.00051928975,"about_ca_topic_score_gemma":0.00022141187,"teacher_disagreement_score":0.17180659,"about_ca_system_score_codex":0.00047708358,"about_ca_system_score_gemma":0.0002709176,"threshold_uncertainty_score":0.94794744},"labels":[],"label_agreement":null},{"id":"W4292879115","doi":"10.3390/jof8090896","title":"Whole Genome Sequencing Shows Genetic Diversity, as Well as Clonal Complex and Gene Polymorphisms Associated with Fluconazole Non-Susceptible Isolates of Candida tropicalis","year":2022,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Medical Research Council; Medical Research Council; National University Health System; NSW Health Pathology; Royal College of Pathologists of Australasia","keywords":"Biology; Fluconazole; Candida tropicalis; Multilocus sequence typing; Genetics; Single-nucleotide polymorphism; Genetic diversity; Genetic variation; Whole genome sequencing; Genome; Gene; Genotype; Microbiology; Population; Antifungal","score_opus":0.018867463664595647,"score_gpt":0.23956637102578995,"score_spread":0.2206989073611943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292879115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99608517,0.0019696266,0.00010999706,0.000355676,0.000071346614,0.00018165377,0.0001260611,0.000008873055,0.001091625],"genre_scores_gemma":[0.99702233,0.00014203622,0.00076086016,0.00048606793,0.00010174543,0.0000013316292,0.00002530584,0.000019749265,0.0014405691],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99820274,0.00007643158,0.00050273974,0.00021421022,0.0007051226,0.00029873502],"domain_scores_gemma":[0.99871755,0.000101839694,0.0004689648,0.00018646126,0.00027178062,0.00025339582],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036476116,0.00017769901,0.0005987017,0.00016940542,0.00033747245,0.000019750909,0.00019189093,0.0000664967,0.0031735217],"category_scores_gemma":[0.00005173946,0.00014730032,0.00017350099,0.0002458176,0.0001519426,0.000101901336,0.00025260312,0.00043138143,0.000012944253],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011880131,0.00018568872,0.37634233,0.000038192204,0.00031022012,0.00047096363,0.00065206666,0.00015577991,0.61979896,0.000010516745,0.00057241286,0.00027484974],"study_design_scores_gemma":[0.0036026137,0.0056038843,0.9781335,0.00011003761,0.00050401624,0.0009513798,0.0016234033,0.0004595452,0.007423246,0.0001748786,0.0011655863,0.00024789642],"about_ca_topic_score_codex":0.00035163583,"about_ca_topic_score_gemma":0.00012775161,"teacher_disagreement_score":0.61237574,"about_ca_system_score_codex":0.00039810312,"about_ca_system_score_gemma":0.0004695732,"threshold_uncertainty_score":0.9977377},"labels":[],"label_agreement":null},{"id":"W4293479337","doi":"10.1016/j.mib.2022.102198","title":"Antifungal discovery","year":2022,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canada Research Chairs; Canadian Institute for Advanced Research","keywords":"Antifungal; Biology; Drug discovery; Antifungal drug; Identification (biology); Antifungal drugs; Computational biology; Human health; Biotechnology; Bioinformatics; Microbiology; Medicine; Environmental health; Ecology","score_opus":0.1472185924700774,"score_gpt":0.42556398086900654,"score_spread":0.27834538839892914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293479337","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000042925814,0.9891695,0.000021841073,0.000018131457,0.009102247,0.0009385468,0.00039860653,0.000035767043,0.0002724359],"genre_scores_gemma":[0.00001587169,0.99378276,0.000023071241,0.000018090643,0.0005031014,0.00011928503,0.0050198357,0.000041122188,0.00047683553],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99738324,0.00040653045,0.00086653495,0.00079889374,0.000087555156,0.00045725246],"domain_scores_gemma":[0.9987999,0.00024886712,0.00026739656,0.00058964884,0.00002170894,0.000072471164],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00041376802,0.00041831916,0.0020491371,0.00034129093,0.00007210417,0.000016860302,0.00027155151,0.00032060483,0.0012839461],"category_scores_gemma":[0.00015437674,0.00033338144,0.00068685383,0.00043010237,0.00018583209,0.000061671504,0.000264056,0.0013739405,0.00016418927],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068899346,0.00045332336,0.0014829916,0.04782813,0.00007518948,0.000011315831,0.00002561856,6.79817e-8,0.000023141718,0.00028165104,0.019409161,0.9303405],"study_design_scores_gemma":[0.00034464072,0.000116674615,0.00013021543,0.009457854,0.000116954674,0.0001611141,0.000017848162,2.2894183e-7,4.7555e-7,0.000012242171,0.9893586,0.00028313766],"about_ca_topic_score_codex":0.0000051295515,"about_ca_topic_score_gemma":0.0000024365143,"teacher_disagreement_score":0.9699494,"about_ca_system_score_codex":0.00041803528,"about_ca_system_score_gemma":0.0007163724,"threshold_uncertainty_score":0.99991184},"labels":[],"label_agreement":null},{"id":"W4295347063","doi":"10.1038/s41467-022-32249-5","title":"The importance of antimicrobial resistance in medical mycology","year":2022,"lang":"en","type":"review","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":219,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Manchester Biomedical Research Centre; National Institutes of Health; Medical Research Council Centre for Medical Mycology; Wellcome Trust; Astellas Pharma; National Institute of Allergy and Infectious Diseases; European Commission; National Institute for Health and Care Research; Medical Research Council; Canadian Institute for Advanced Research","keywords":"Drug resistance; Malaria; Antibiotic resistance; Medicine; Pandemic; Antifungal; Intensive care medicine; Public health; Antibiotics; Biology; Microbiology; Immunology; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Disease; Internal medicine; Pathology; Dermatology","score_opus":0.05201359478994537,"score_gpt":0.4068288846815974,"score_spread":0.354815289891652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295347063","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000027002981,0.98589766,8.012327e-7,0.0030318222,0.0001613734,0.0007246689,0.00006254145,0.000019165049,0.010074978],"genre_scores_gemma":[0.0018475174,0.9961299,0.00045001222,0.00034327878,0.00003987459,0.00013933556,0.0003157866,0.000026326912,0.0007079966],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974278,0.00065041875,0.0009556722,0.00028941475,0.00043901755,0.00023762927],"domain_scores_gemma":[0.9931218,0.0027862291,0.00045701786,0.0034612368,0.00009884384,0.00007488585],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.001435289,0.0002016436,0.0011804915,0.00012008362,0.00029035457,0.0000073435526,0.0019309897,0.0007716381,0.0002422715],"category_scores_gemma":[0.002876515,0.00013698496,0.00039196108,0.00085533113,0.00065817946,0.000023670842,0.00063703913,0.004351343,0.0000063592474],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004359864,0.002252384,0.017360218,0.028269026,0.00078949035,0.00022577604,0.00037056554,6.406172e-8,0.0000059710687,0.1261246,0.1291829,0.694983],"study_design_scores_gemma":[0.00017560097,0.000015549738,0.0011130412,0.002593822,0.00017529142,0.00002354186,0.000028356253,7.0620644e-7,2.093123e-7,0.00007440232,0.9956999,0.00009960343],"about_ca_topic_score_codex":0.0000077925615,"about_ca_topic_score_gemma":0.010167362,"teacher_disagreement_score":0.86651695,"about_ca_system_score_codex":0.0002656312,"about_ca_system_score_gemma":0.0017277519,"threshold_uncertainty_score":0.99794567},"labels":[],"label_agreement":null},{"id":"W4297236318","doi":"10.1101/2022.09.23.509114","title":"In host evolution of <i>Exophiala dermatitidis</i> in cystic fibrosis lung micro-environment","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, Riverside; Canadian Institute for Advanced Research; National Institutes of Health; Cystic Fibrosis Foundation; National Science Foundation","keywords":"Biology; Population; Genetics; Microbiology","score_opus":0.00760838351355101,"score_gpt":0.22013456885741392,"score_spread":0.21252618534386292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297236318","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993627,0.003799134,0.00036217645,0.0002668023,0.00037016658,0.0011821467,0.00031999603,0.00005380342,0.000018757777],"genre_scores_gemma":[0.9966327,0.00064652256,0.0020829553,0.00012843347,0.00010147427,0.00032079007,0.0000013271083,0.00007293967,0.000012875839],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9968506,0.00023847411,0.00097125594,0.00088186667,0.0005600961,0.0004977096],"domain_scores_gemma":[0.99805623,0.000093333925,0.00039225983,0.0011976777,0.0000965624,0.00016391177],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008293322,0.00042426668,0.00089087494,0.00045233514,0.00006586281,0.00002350554,0.00030152395,0.0003780252,0.00042319167],"category_scores_gemma":[0.00024026964,0.00048525867,0.00020176024,0.00056075765,0.00016637615,0.0001249988,0.00047406636,0.0010198565,0.000022357188],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016127991,0.00037182783,0.46988583,0.0014747869,0.000034485536,0.00010296436,0.000020063471,0.000107859596,0.5275824,0.000080438316,0.00017790437,1.766928e-7],"study_design_scores_gemma":[0.0009910308,0.00007175951,0.9209095,0.00095695537,0.00011255406,2.367498e-8,0.000022612541,0.00022346064,0.075442426,0.0000027165033,0.00087879586,0.0003881198],"about_ca_topic_score_codex":0.00039385972,"about_ca_topic_score_gemma":0.00002153056,"teacher_disagreement_score":0.45213997,"about_ca_system_score_codex":0.0023113154,"about_ca_system_score_gemma":0.00077475084,"threshold_uncertainty_score":0.9997599},"labels":[],"label_agreement":null},{"id":"W4297265644","doi":"10.1139/cjm-2022-0139","title":"Correlation between <i>SAP2</i> and <i>CAP1</i> in clinical strains of <i>Candida albicans</i> at planktonic and biofilm states","year":2022,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biofilm; Biology; Candida albicans; Microbiology; Missense mutation; Corpus albicans; Downregulation and upregulation; Gene; Genetics; Mutation; Bacteria","score_opus":0.017034230848321185,"score_gpt":0.26768352346395957,"score_spread":0.2506492926156384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297265644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99535424,0.0028444543,0.000011037014,0.0009052342,0.000148174,0.00012487388,0.00047498557,0.0000015663727,0.00013541454],"genre_scores_gemma":[0.9987318,0.00029468007,0.00007363435,0.00059813645,0.000047809623,8.1205553e-7,0.000082591345,0.000008396289,0.00016213999],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99869496,0.00015300649,0.00068584085,0.0001700753,0.000050906336,0.00024523714],"domain_scores_gemma":[0.9990197,0.00020622445,0.00028022996,0.00010905729,0.000064421554,0.00032037505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089151773,0.000098449775,0.0004988285,0.00018899777,0.00009350911,0.000004248851,0.00006849229,0.00010529765,0.00020803337],"category_scores_gemma":[0.00010189507,0.000089559086,0.00007201379,0.000120975405,0.00044939996,0.00003433201,0.000031612944,0.00047320873,7.91928e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001925104,0.000019383458,0.9810868,0.000029543678,0.000049479673,0.00013726784,0.0003196033,0.000009175349,0.014390782,0.000025899168,0.0025392438,0.0012003379],"study_design_scores_gemma":[0.002726341,0.0015212457,0.9598138,0.00007170923,0.00010375407,0.001164287,0.0008481704,0.000010752209,0.00051747984,0.000120971636,0.032971837,0.0001296874],"about_ca_topic_score_codex":0.0016313778,"about_ca_topic_score_gemma":0.033370823,"teacher_disagreement_score":0.031739447,"about_ca_system_score_codex":0.00017384089,"about_ca_system_score_gemma":0.00092617323,"threshold_uncertainty_score":0.98426765},"labels":[],"label_agreement":null},{"id":"W4297464316","doi":"10.1101/2022.09.28.509882","title":"A host defense peptide mimetic, brilacidin, potentiates caspofungin antifungal activity against human pathogenic fungi","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Aspergillus fumigatus; Caspofungin; Microbiology; Cryptococcus neoformans; Biology; Echinocandins; Candida albicans; Amphotericin B; Antifungal","score_opus":0.018291920450363847,"score_gpt":0.24981187561031878,"score_spread":0.23151995515995494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297464316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885057,0.006005091,0.00029894596,0.00018236539,0.0011306839,0.0019559253,0.0010096504,0.0007860334,0.0001255578],"genre_scores_gemma":[0.99570227,0.0011590769,0.0013006654,0.0004265754,0.0006312027,0.00026860487,0.000008181616,0.00034784438,0.0001555848],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9929274,0.0005409922,0.001104739,0.0025757165,0.0013782295,0.0014729524],"domain_scores_gemma":[0.99398315,0.00017084775,0.0008073489,0.003403914,0.00078715186,0.0008476154],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.001739786,0.0013009347,0.0018447285,0.0006004967,0.00082068663,0.00027584282,0.00078379305,0.0008850059,0.00079383136],"category_scores_gemma":[0.0005702109,0.0014318911,0.0010911818,0.000968524,0.0003663127,0.0002430146,0.001355189,0.002859589,0.000173381],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039648067,0.00070766715,0.16930039,0.0011630183,0.00050277426,0.0013032188,0.000019226418,0.000015401398,0.82572937,0.00011473202,0.0007436035,0.000004125798],"study_design_scores_gemma":[0.001262073,0.00025938614,0.7945183,0.0006732988,0.000682716,2.903561e-7,0.000023848746,0.00013483112,0.19841148,0.0000019899026,0.0026652198,0.0013665769],"about_ca_topic_score_codex":0.00020066772,"about_ca_topic_score_gemma":0.00003146055,"teacher_disagreement_score":0.6273179,"about_ca_system_score_codex":0.0011593499,"about_ca_system_score_gemma":0.0015619627,"threshold_uncertainty_score":0.99997425},"labels":[],"label_agreement":null},{"id":"W4297988839","doi":"10.1080/10428194.2022.2126282","title":"Subtherapeutic concentrations of posaconazole tablet: determining risk factors and effectiveness of a standardized dose adjustment in hematology inpatients","year":2022,"lang":"en","type":"article","venue":"Leukemia & lymphoma/Leukemia and lymphoma","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Surrey Memorial Hospital","funders":"","keywords":"Posaconazole; Medicine; Hematology; Internal medicine; Therapeutic drug monitoring; Gastroenterology; Pharmacology; Antifungal; Pharmacokinetics; Voriconazole","score_opus":0.010899608130516722,"score_gpt":0.2568458399961135,"score_spread":0.24594623186559678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297988839","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995253,0.0032105143,0.0000843,0.000008315308,0.00013782202,0.00084522035,0.00023644033,0.000028972703,0.00019540223],"genre_scores_gemma":[0.99904555,0.00051191665,0.00012935698,0.00007293321,0.000012558317,0.00009574002,0.00007406979,0.000033417466,0.000024443349],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99713016,0.000559086,0.0008021667,0.0005742562,0.00048339542,0.00045092852],"domain_scores_gemma":[0.9981388,0.0007449157,0.00041677465,0.0004002006,0.000120291836,0.0001790399],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00068550644,0.00034417224,0.0011336787,0.00024400599,0.00022303485,0.0000120299455,0.00013462862,0.00016466233,0.000058340855],"category_scores_gemma":[0.00015185623,0.00031152903,0.00015232533,0.00044292668,0.00041135435,0.00013099644,0.00016635735,0.00014280836,5.4241673e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039684307,0.00033978105,0.95853835,0.00068111054,0.00019258738,0.000057724697,0.0022042633,0.00008612421,0.020625273,0.0004883443,0.00001002295,0.0128079625],"study_design_scores_gemma":[0.019093053,0.00097648957,0.9471898,0.0002816633,0.00022970223,0.000110181325,0.0022283583,0.0016728126,0.02759788,0.00022278125,0.00013913128,0.0002581239],"about_ca_topic_score_codex":0.0016145332,"about_ca_topic_score_gemma":0.000119009615,"teacher_disagreement_score":0.015124622,"about_ca_system_score_codex":0.002716049,"about_ca_system_score_gemma":0.0020156398,"threshold_uncertainty_score":0.99993366},"labels":[],"label_agreement":null},{"id":"W4299502980","doi":"","title":"In vitro activity of essential oils and their major components against Candida albicans yeasts growing planktonically and as biofilms","year":2007,"lang":"en","type":"preprint","venue":"HAL (Le Centre pour la Communication Scientifique Directe)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministère des Transports","funders":"","keywords":"Candida albicans; Biofilm; In vitro; Microbiology; Chemistry; Biology; Bacteria; Biochemistry","score_opus":0.012042619498725395,"score_gpt":0.25157409724819985,"score_spread":0.23953147774947445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4299502980","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98685473,0.0008350084,0.002733506,0.0026485536,0.00008834782,0.00047580636,0.00011819932,0.000040167946,0.0062056677],"genre_scores_gemma":[0.99473053,0.00075599866,0.0034230326,0.00014886401,0.000017541552,0.0000130936705,0.00022496107,0.000027029357,0.0006589325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996813,0.0013010473,0.0005129873,0.0006958438,0.00034048778,0.00033661988],"domain_scores_gemma":[0.99693847,0.0009149636,0.00033822822,0.0010251926,0.00053857284,0.00024456065],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0031897286,0.00030313272,0.0006745308,0.00021445112,0.00012653029,0.00007433304,0.00029746577,0.0003224469,0.000038757258],"category_scores_gemma":[0.00081061746,0.00028210267,0.00014246744,0.00020478538,0.000508021,0.000127699,0.0006974915,0.0007290167,0.0000025561153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005715169,0.0007686006,0.022914618,0.0006831644,0.00012250445,0.000034170615,0.0034044492,0.000001648637,0.9458938,0.0010142969,0.000033505734,0.024557695],"study_design_scores_gemma":[0.0017422913,0.000001972745,0.1522167,0.002582674,0.00006886853,0.000019914014,0.00020012938,0.0019301472,0.84004724,0.0004174824,0.00042319,0.00034936419],"about_ca_topic_score_codex":0.004161462,"about_ca_topic_score_gemma":0.002773027,"teacher_disagreement_score":0.12930208,"about_ca_system_score_codex":0.00011231861,"about_ca_system_score_gemma":0.00032700045,"threshold_uncertainty_score":0.9999631},"labels":[],"label_agreement":null},{"id":"W4300868546","doi":"","title":"Promising results of cranberry in the prevention of oral Candida biofilms.","year":2014,"lang":"en","type":"preprint","venue":"HAL (Le Centre pour la Communication Scientifique Directe)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Biofilm; Microbiology; Candida albicans; Medicine; Biology; Bacteria","score_opus":0.023315355002851798,"score_gpt":0.28083186142673294,"score_spread":0.25751650642388113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4300868546","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9618124,0.00053783937,0.0050438377,0.0040146615,0.00007211782,0.000820234,0.000053434866,0.000029383356,0.0276161],"genre_scores_gemma":[0.98926365,0.00022547992,0.0077962996,0.000035944708,0.000010158889,0.000021540885,0.00029070213,0.000016488291,0.0023397221],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9943477,0.0036678617,0.0008456938,0.00045787042,0.0004771252,0.00020377658],"domain_scores_gemma":[0.99528956,0.00082218205,0.000713872,0.001854116,0.0012580754,0.0000622181],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.009844387,0.0001909493,0.0005256328,0.0001550171,0.000070509814,0.000036309586,0.00054251193,0.00023548721,0.000032134707],"category_scores_gemma":[0.0028485288,0.00015102449,0.0002399741,0.00031731394,0.00030454568,0.000048101298,0.00028751176,0.00052615075,0.0000029068194],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0041564913,0.012978014,0.35943243,0.013634136,0.00075699587,0.00004188075,0.11124374,0.00022467694,0.21598499,0.04533441,0.0067804963,0.22943175],"study_design_scores_gemma":[0.006361209,0.000011903673,0.6576575,0.02294211,0.00040730962,0.000017698576,0.0013599888,0.0077787503,0.29040268,0.007707492,0.0046704942,0.00068288896],"about_ca_topic_score_codex":0.0031458926,"about_ca_topic_score_gemma":0.005689385,"teacher_disagreement_score":0.29822505,"about_ca_system_score_codex":0.000071274,"about_ca_system_score_gemma":0.0004027468,"threshold_uncertainty_score":0.61586},"labels":[],"label_agreement":null},{"id":"W4302030413","doi":"10.2139/ssrn.4181706","title":"Diagnostic Capacity for Fungal Infections in Advanced HIV Disease in Africa: A Continent-Wide Survey","year":2022,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Fungal disease; Human immunodeficiency virus (HIV); Disease; Medicine; Geography; Virology; Intensive care medicine; Pathology; Dermatology","score_opus":0.01941718649815343,"score_gpt":0.26590518471186486,"score_spread":0.24648799821371142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4302030413","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931445,0.0021994023,0.0025582437,0.0011071637,0.00014567519,0.00065081986,0.000081711194,0.000019329824,0.00009316112],"genre_scores_gemma":[0.9978223,0.00077184074,0.000037842754,0.00009525906,0.000063554304,0.00017365471,0.00004009798,0.000022178636,0.00097328407],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969618,0.00033124886,0.0004294125,0.00029111616,0.00029949116,0.0016869415],"domain_scores_gemma":[0.9982962,0.0011084351,0.00011846567,0.00020185257,0.00010433726,0.00017072808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003229979,0.00015494836,0.0003384534,0.00022479394,0.00024358383,0.0000149762,0.00012309344,0.00003734831,0.0000716849],"category_scores_gemma":[0.005230143,0.00015115757,0.00016115625,0.00049086974,0.00005118265,0.00012400554,0.000041576754,0.0020304155,0.000004291648],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016003227,0.00071472337,0.9941599,0.000024973042,0.00003569301,0.00003834059,0.00012622445,0.0003708346,0.00011750185,0.0016918862,0.00018365463,0.00093593955],"study_design_scores_gemma":[0.0038939624,0.0006905973,0.978852,0.00004759907,0.000045079556,0.000061974824,0.0007000912,0.000202518,0.0000078681815,0.013555351,0.0017793743,0.00016358687],"about_ca_topic_score_codex":0.00026385512,"about_ca_topic_score_gemma":0.02406891,"teacher_disagreement_score":0.023805056,"about_ca_system_score_codex":0.002287314,"about_ca_system_score_gemma":0.0025427523,"threshold_uncertainty_score":0.9937393},"labels":[],"label_agreement":null},{"id":"W4303856896","doi":"10.3390/microorganisms10101989","title":"Cinnamon Leaf and Clove Essential Oils Are Potent Inhibitors of Candida albicans Virulence Traits","year":2022,"lang":"en","type":"article","venue":"Microorganisms","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada; University of Regina","keywords":"Candida albicans; Virulence; Microbiology; Biology; Essential oil; Corpus albicans; Food science; Gene; Genetics","score_opus":0.006355739721401973,"score_gpt":0.22466396703688415,"score_spread":0.2183082273154822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4303856896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974057,0.00059267617,0.00014713805,0.0008275673,0.00014585324,0.00026516902,0.00011777342,0.000029686269,0.0004684185],"genre_scores_gemma":[0.9982248,0.000056785204,0.00023158966,0.00042537937,0.00007980642,0.000007713522,0.000018996527,0.000024597128,0.00093033456],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986491,0.000044632634,0.0003247658,0.0003717854,0.0003493333,0.00026038417],"domain_scores_gemma":[0.999387,0.000028913211,0.00014147152,0.00023551765,0.00007481329,0.00013225044],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00020376124,0.00015696236,0.00035608496,0.000071378185,0.0001780366,0.000011320748,0.0001034929,0.00006081795,0.0009519182],"category_scores_gemma":[0.000049302384,0.00014891666,0.00009151027,0.00022024241,0.00018331049,0.00004904109,0.00012807512,0.00027105998,0.000007615587],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002378239,0.00018989891,0.021432426,0.00011820745,0.0000325604,0.00006835151,0.0009305174,0.0000026817213,0.97415966,0.000057958183,0.0011672518,0.0016026669],"study_design_scores_gemma":[0.0012518354,0.00044231353,0.13329007,0.000060071412,0.00010604265,0.00007662315,0.0023963654,0.00001143138,0.8604109,0.0000957247,0.0016606519,0.00019794508],"about_ca_topic_score_codex":0.00028724308,"about_ca_topic_score_gemma":0.00019862714,"teacher_disagreement_score":0.11374874,"about_ca_system_score_codex":0.00011391972,"about_ca_system_score_gemma":0.00015111032,"threshold_uncertainty_score":0.9999614},"labels":[],"label_agreement":null},{"id":"W4304777637","doi":"10.1016/j.mib.2022.102208","title":"The molecular and genetic basis of antifungal resistance in the emerging fungal pathogen Candida auris","year":2022,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; St. Jude Children's Research Hospital; Broad Institute; Canadian Institute for Advanced Research","keywords":"Candida auris; Biology; Fungal pathogen; Pathogen; Antifungal; Microbiology; Amphotericin B; Drug resistance; Antifungal drugs","score_opus":0.05496939377420475,"score_gpt":0.3662929727631646,"score_spread":0.31132357898895985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304777637","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0051695886,0.99209964,0.000011649322,0.00012451858,0.0011666232,0.0010992714,0.0002462107,0.0000067543956,0.00007573043],"genre_scores_gemma":[0.0024062723,0.9969211,0.00004362207,0.000021086082,0.00009465282,0.00015019954,0.00030675062,0.000025144916,0.00003112947],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99662125,0.001230736,0.0009939864,0.00058488734,0.0001441639,0.0004249612],"domain_scores_gemma":[0.99826545,0.0006320729,0.00036811022,0.000653218,0.000038492806,0.000042634107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010636064,0.00033559877,0.0011978203,0.00019997626,0.00014205297,0.00001413629,0.0004166395,0.00019531269,0.00006505243],"category_scores_gemma":[0.00025612596,0.00020183441,0.0002982838,0.00055560615,0.00035268412,0.000016919774,0.00018268007,0.00094335293,0.000002890767],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003323891,0.00044041162,0.028499149,0.046466287,0.00020333272,0.0001178398,0.0012220327,0.0000010789933,0.0008533645,0.0010102862,0.0057035093,0.91515034],"study_design_scores_gemma":[0.0003632227,0.00007730381,0.002947825,0.004333134,0.000118923235,0.000089092435,0.0002098427,9.335822e-7,0.0000042340994,0.000042610387,0.99162596,0.00018689377],"about_ca_topic_score_codex":0.000024692723,"about_ca_topic_score_gemma":0.00013148306,"teacher_disagreement_score":0.98592246,"about_ca_system_score_codex":0.00015310607,"about_ca_system_score_gemma":0.0003891938,"threshold_uncertainty_score":0.8230568},"labels":[],"label_agreement":null},{"id":"W4304893496","doi":"10.1093/genetics/iyac152","title":"The GARP complex is required for filamentation in <i>Candida albicans</i>","year":2022,"lang":"en","type":"article","venue":"Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canadian Institute for Advanced Research","keywords":"Biology; Filamentation; Cell biology; Genetic screen; Candida albicans; Genetics; Gene; Mutant","score_opus":0.04745870806235686,"score_gpt":0.3298019969063652,"score_spread":0.28234328884400833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304893496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918454,0.00062947965,0.00054381334,0.004534543,0.00012899158,0.0007373946,0.00009512978,0.000014598282,0.001470626],"genre_scores_gemma":[0.99446476,0.00009078711,0.0008961794,0.0021604262,0.00004508675,0.000086102824,0.000063001346,0.000009483365,0.0021841896],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.999287,0.0000341612,0.00017606204,0.00014322538,0.00019366785,0.00016589007],"domain_scores_gemma":[0.9995812,0.0000911574,0.000040199433,0.00021795454,0.000036127458,0.00003333453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021567443,0.000055669847,0.00009981817,0.000018896993,0.00021631773,0.000010476574,0.00007540043,0.000016613529,0.00026626018],"category_scores_gemma":[0.000034696634,0.000044876026,0.00004936136,0.00011185025,0.000056247918,0.000008858201,0.0000359214,0.000074181065,0.0000035164655],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025632626,0.00044445592,0.47552165,0.00019328558,0.000094606185,0.000021815942,0.004034436,0.00021284701,0.15246966,0.0010769526,0.30119035,0.06217668],"study_design_scores_gemma":[0.00223163,0.0006483414,0.40784895,0.000011419421,0.000047999252,0.0000061134883,0.0034274869,0.0022301096,0.0043885675,0.0016305242,0.577393,0.00013585862],"about_ca_topic_score_codex":0.000019071422,"about_ca_topic_score_gemma":0.0002669845,"teacher_disagreement_score":0.27620265,"about_ca_system_score_codex":0.00009643733,"about_ca_system_score_gemma":0.000081082755,"threshold_uncertainty_score":0.2915362},"labels":[],"label_agreement":null},{"id":"W4306639603","doi":"10.3138/jammi-2022-0020","title":"Hepatosplenic mucormycosis due to <i>Rhizomucor pusillus</i> identified by panfungal PCR/sequencing of ribosomal ITS2 and LSU regions in a patient with acute myelogenous leukemia: A case report","year":2022,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Calgary Laboratory Services; University of Calgary; Alberta Precision Laboratories; Alberta Health Services","keywords":"Mucormycosis; Biology; Polymerase chain reaction; Medicine; Pathology; Gene; Genetics","score_opus":0.004297644891667818,"score_gpt":0.20748218884715,"score_spread":0.2031845439554822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306639603","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958004,0.00053581316,0.00002550372,0.0028461332,0.00022130409,0.00025511437,0.0002903841,0.000002972771,0.00002240675],"genre_scores_gemma":[0.9984839,0.00010203619,0.000010601878,0.001264385,0.000024802155,0.000009015347,0.000017678121,0.000007579663,0.000080018974],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981843,0.00030474638,0.00069768215,0.00017636552,0.000435213,0.00020169246],"domain_scores_gemma":[0.9981764,0.0002476411,0.0008723424,0.0001560634,0.0002570105,0.00029052526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009104593,0.0001147754,0.00048641744,0.00008363502,0.00018491322,0.0000048554043,0.00009522957,0.000099696466,0.000037640257],"category_scores_gemma":[0.0013183684,0.00008079601,0.00009629274,0.00025606947,0.000107772445,0.000043329943,0.000113364,0.00050353934,4.0797143e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016395067,0.0003216717,0.90714693,0.00014067748,0.00075828924,0.036740705,0.00059792306,0.000033087745,0.029953782,0.000041313877,0.022199476,0.0004266576],"study_design_scores_gemma":[0.014703967,0.0053509716,0.50616425,0.0012223668,0.0033475151,0.4480924,0.004941036,0.00013958855,0.007705601,0.0003476891,0.007157303,0.0008273315],"about_ca_topic_score_codex":0.04480132,"about_ca_topic_score_gemma":0.164647,"teacher_disagreement_score":0.41135168,"about_ca_system_score_codex":0.0015323415,"about_ca_system_score_gemma":0.003986131,"threshold_uncertainty_score":0.9615594},"labels":[],"label_agreement":null},{"id":"W4306641121","doi":"10.21203/rs.3.rs-2105877/v1","title":"Incidence, susceptibility and outcomes of candidemia in adults living in Calgary, Alberta, Canada (2010 – 2018)","year":2022,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary; Alberta Health Services","funders":"Dairy Farmers of Manitoba; Natural Sciences and Engineering Research Council of Canada; European Society of Clinical Microbiology and Infectious Diseases; Dairy Farmers of Canada","keywords":"Incidence (geometry); Fluconazole; Medicine; Candida albicans; Candida glabrata; Population; Mortality rate; Corpus albicans; Blood culture; Demography; Internal medicine; Biology; Antifungal; Environmental health; Microbiology; Antibiotics","score_opus":0.03041273622436737,"score_gpt":0.3580838754922164,"score_spread":0.327671139267849,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306641121","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993911,0.0014536459,0.0000018416404,0.00082282454,0.00018615268,0.0017349399,0.00010697618,0.000010028765,0.0017725403],"genre_scores_gemma":[0.9959122,0.0006837541,0.000071089824,0.00005703363,0.000034216144,0.00015763959,0.00008470896,0.000031353793,0.0029680103],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9942952,0.0009412367,0.00095733325,0.0010933413,0.0018405311,0.0008723963],"domain_scores_gemma":[0.9948201,0.0029972063,0.00016178997,0.0012930139,0.0003820073,0.0003458552],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0045626806,0.00031994464,0.0011784307,0.00058641675,0.00011149991,0.000020758649,0.0004005193,0.00036689287,0.0011239373],"category_scores_gemma":[0.008844812,0.00029181695,0.0001308775,0.0006504095,0.0003735276,0.000073161624,0.0017032728,0.0035855423,0.0000022718796],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054140796,0.00023165141,0.99086225,0.004305302,0.000028444047,0.00023019988,0.00137104,0.00001994962,0.00003402581,0.000034434965,0.0013525828,0.0009887253],"study_design_scores_gemma":[0.0006415422,0.00018527567,0.9924598,0.0028369387,0.000010444889,0.0000026344726,0.0028863696,0.0004011261,0.000021282576,0.00017244832,0.0001673566,0.0002148246],"about_ca_topic_score_codex":0.9918034,"about_ca_topic_score_gemma":0.99880475,"teacher_disagreement_score":0.007001325,"about_ca_system_score_codex":0.0027325696,"about_ca_system_score_gemma":0.0072983243,"threshold_uncertainty_score":0.9999534},"labels":[],"label_agreement":null},{"id":"W4306755851","doi":"10.1038/s41522-022-00347-3","title":"Filamentous fungal biofilms: Conserved and unique aspects of extracellular matrix composition, mechanisms of drug resistance and regulatory networks in Aspergillus fumigatus","year":2022,"lang":"en","type":"review","venue":"npj Biofilms and Microbiomes","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Institute of Infection and Immunity; McGill University Health Centre","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"Biofilm; Aspergillus fumigatus; Microbiology; Extracellular matrix; Biology; Drug resistance; Cell biology; Bacteria; Genetics","score_opus":0.016223130621116185,"score_gpt":0.2731358454502543,"score_spread":0.25691271482913813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306755851","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.046388865,0.95167536,0.000027649596,0.000045418525,0.000106578904,0.0011878436,0.00036290646,0.000027702505,0.00017765419],"genre_scores_gemma":[0.078754015,0.91794455,0.0009719184,0.000028323624,0.000023604753,0.000031126412,0.0003371168,0.000055196073,0.0018541325],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971297,0.00029884005,0.0011488713,0.000788167,0.00022961295,0.00040482983],"domain_scores_gemma":[0.99830854,0.0002482682,0.00064209744,0.00053567195,0.00008799444,0.00017743881],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007735225,0.0005416799,0.0023418132,0.0004064017,0.00012802762,0.000027550659,0.00014677612,0.00043778,0.00013807756],"category_scores_gemma":[0.000030228484,0.00047282418,0.00026176195,0.00051079807,0.00067687966,0.00006938397,0.00019459448,0.0005260786,4.7943234e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023218966,0.001720658,0.0023412814,0.2073413,0.002018613,0.0013597806,0.0011849599,0.0000017797653,0.61491066,0.046560604,0.004102037,0.11613641],"study_design_scores_gemma":[0.01061121,0.0018013028,0.006716915,0.076115064,0.0060082134,0.0018397492,0.0025651755,0.00007094011,0.034822263,0.001557441,0.85392874,0.003962992],"about_ca_topic_score_codex":0.00010938668,"about_ca_topic_score_gemma":0.00015830278,"teacher_disagreement_score":0.8498267,"about_ca_system_score_codex":0.00012532275,"about_ca_system_score_gemma":0.0003133662,"threshold_uncertainty_score":0.99977237},"labels":[],"label_agreement":null},{"id":"W4306835795","doi":"10.3390/jof8101102","title":"Calcineurin Inhibitors Synergize with Manogepix to Kill Diverse Human Fungal Pathogens","year":2022,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Mitacs","keywords":"Calcineurin; Biology; Microbiology; Mycetoma; Human pathogen; Virology; Medicine; Bacteria; Genetics","score_opus":0.016440450488235853,"score_gpt":0.27459278918989594,"score_spread":0.2581523387016601,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306835795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99680525,0.00047942682,0.000075907454,0.0008374869,0.00031118395,0.00020603996,0.000029320692,0.000017585317,0.0012378211],"genre_scores_gemma":[0.9951969,0.000023329994,0.00055973773,0.0007653011,0.00041914955,0.000004749524,0.000003975217,0.000025363643,0.0030015202],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980444,0.00009552447,0.00048634934,0.0002138099,0.0008643874,0.00029553918],"domain_scores_gemma":[0.998814,0.000054809465,0.00024748614,0.00028333813,0.00023685662,0.00036350064],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005808747,0.00016470447,0.00043496556,0.00022701338,0.00026557807,0.000016156135,0.00016538556,0.00003993999,0.00091364677],"category_scores_gemma":[0.000074876014,0.00012205902,0.00023421529,0.0003439071,0.000047074944,0.00009562362,0.000115879004,0.0005575868,0.000020093526],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004417141,0.00091570936,0.666346,0.0001231307,0.00026636405,0.00875949,0.0013044726,0.00030325982,0.2730278,0.00023369255,0.03977705,0.0045258505],"study_design_scores_gemma":[0.005492904,0.01259352,0.88740647,0.00034033557,0.0006795849,0.0030531003,0.0065819127,0.000023105797,0.013342659,0.000085393556,0.069837324,0.0005636825],"about_ca_topic_score_codex":0.000019808691,"about_ca_topic_score_gemma":0.000037122394,"teacher_disagreement_score":0.25968516,"about_ca_system_score_codex":0.0002597745,"about_ca_system_score_gemma":0.00017924716,"threshold_uncertainty_score":0.99999964},"labels":[],"label_agreement":null},{"id":"W4307431329","doi":"10.1128/mbio.02730-22","title":"The Trisubstituted Isoxazole MMV688766 Exerts Broad-Spectrum Activity against Drug-Resistant Fungal Pathogens through Inhibition of Lipid Homeostasis","year":2022,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Toronto","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Candida albicans; Biology; Mode of action; Candida auris; Antifungal drug; Fungal pathogen; Isoxazole; Microbiology; Drug resistance; Corpus albicans; Fungicide; Fungus; Pathogen; Biochemistry; Antifungal; Chemistry","score_opus":0.01674109359704583,"score_gpt":0.2563303467889211,"score_spread":0.23958925319187524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307431329","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908769,0.0015303966,0.00013096338,0.002319994,0.00038412513,0.000655962,0.0003151916,0.00009352566,0.0036929562],"genre_scores_gemma":[0.9974459,0.0006036542,0.0000681394,0.0003031285,0.00015429371,0.00006860861,0.00008730324,0.000031380157,0.0012376365],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975136,0.0002581248,0.00047708183,0.00048530294,0.0007702688,0.0004956404],"domain_scores_gemma":[0.9985607,0.00019265151,0.00025547354,0.00076394086,0.000112235095,0.00011498143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007420652,0.00024642446,0.00048628988,0.0000760395,0.0008849861,0.0000302134,0.00017365243,0.00008026348,0.000262959],"category_scores_gemma":[0.00016361878,0.00019262609,0.00032218226,0.0006234842,0.00029193683,0.00015306259,0.00017598548,0.0005060263,0.000018310137],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01218359,0.0028499796,0.03746366,0.0004948025,0.0003827651,0.0004484418,0.0035254315,0.00005524568,0.8739479,0.0023734008,0.031192044,0.035082746],"study_design_scores_gemma":[0.0055259904,0.0012002869,0.3278899,0.0002193025,0.00034259353,0.000042710402,0.0057671317,0.00020107828,0.53503126,0.0010582788,0.121896625,0.00082483946],"about_ca_topic_score_codex":0.00016165683,"about_ca_topic_score_gemma":0.00044537662,"teacher_disagreement_score":0.33891663,"about_ca_system_score_codex":0.000357141,"about_ca_system_score_gemma":0.00028521483,"threshold_uncertainty_score":0.7855064},"labels":[],"label_agreement":null},{"id":"W4307445622","doi":"10.1016/j.rxeng.2022.06.004","title":"Spectrum of opportunistic fungal lung co-infections in COVID-19: What the radiologist needs to know","year":2022,"lang":"en","type":"article","venue":"Radiología (English Edition)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Mucormycosis; Immunosuppression; Aspergillosis; Intensive care medicine; Opportunistic infection; Lung; Coronavirus disease 2019 (COVID-19); Medicine; Cryptococcus; Disease; Dermatology; Immunology; Pathology; Human immunodeficiency virus (HIV); Biology; Infectious disease (medical specialty); Microbiology; Internal medicine; Viral disease","score_opus":0.021870443659706865,"score_gpt":0.30509669233525805,"score_spread":0.2832262486755512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307445622","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9501103,0.0026797587,0.003057683,0.026351918,0.0058439765,0.0024907528,0.0006734207,0.00032657923,0.008465579],"genre_scores_gemma":[0.9938928,0.0005747502,0.00004302605,0.0029416417,0.0011993127,0.00027092805,0.0004467573,0.000022437856,0.0006083547],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976644,0.00047775623,0.00057816214,0.00042117853,0.00039816345,0.00046037315],"domain_scores_gemma":[0.9977823,0.00090939336,0.00016354903,0.0006506831,0.00011672589,0.00037735025],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015432036,0.0002200524,0.00055227836,0.00036681507,0.0006268158,0.00005579024,0.0002873442,0.00011421312,0.002551929],"category_scores_gemma":[0.0032469907,0.00017948986,0.00020849473,0.0009983084,0.0005694632,0.00027379268,0.00010593009,0.0007307079,0.0000154779],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001411496,0.0010909378,0.55868953,0.00030922313,0.0001840922,0.00043951356,0.005541164,0.0020979196,0.001124366,0.019325117,0.40871227,0.0010743613],"study_design_scores_gemma":[0.006061007,0.0044998582,0.31630966,0.00032648447,0.00043000997,0.0011007215,0.062599674,0.0010617014,0.00035661468,0.00344766,0.60275894,0.0010476813],"about_ca_topic_score_codex":0.00008539225,"about_ca_topic_score_gemma":0.00016502908,"teacher_disagreement_score":0.24237989,"about_ca_system_score_codex":0.00092106225,"about_ca_system_score_gemma":0.00091719365,"threshold_uncertainty_score":0.99835986},"labels":[],"label_agreement":null},{"id":"W4307580705","doi":"10.1111/petr.14399","title":"Prospective Evaluation of the Fungitell® (1→3) <scp>Beta‐D‐Glucan</scp> Assay as a Diagnostic Tool for Invasive Fungal Disease in Pediatric Allogeneic Hematopoietic Cell Transplantation: A Report from the Children's Oncology Group","year":2022,"lang":"en","type":"article","venue":"Pediatric Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canada Research Chairs; Merck KGaA; Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Cancer Institute; St. Baldrick's Foundation","keywords":"Medicine; Context (archaeology); Internal medicine; Hematopoietic cell; Confidence interval; Hematopoietic stem cell transplantation; Transplantation; Caspofungin; Antifungal; Haematopoiesis; Amphotericin B","score_opus":0.013710713507544783,"score_gpt":0.2689568769847014,"score_spread":0.2552461634771566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307580705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885157,0.003352802,0.0008234612,0.00033076594,0.00038882092,0.005241683,0.0010945427,0.0000378822,0.00021438113],"genre_scores_gemma":[0.9911753,0.00455467,0.00012395992,0.00018200112,0.00048114368,0.001710669,0.0016776704,0.000039140556,0.00005543723],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9956887,0.0009322133,0.000918658,0.00071623095,0.0013693119,0.00037490006],"domain_scores_gemma":[0.9925903,0.005911872,0.00056286587,0.00050054945,0.00031139838,0.00012302792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002247415,0.00029874803,0.0004421605,0.0001921281,0.00035933772,0.00002169417,0.00029241765,0.00012925055,0.000074431526],"category_scores_gemma":[0.001455817,0.00022504976,0.0003378327,0.0009977003,0.00009116505,0.00015371686,0.000028077104,0.00046699427,0.000006975342],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008256154,0.0006893067,0.99200046,0.000690277,0.000050414597,0.00016327812,0.0037366091,0.0012124929,0.0002050281,0.000087336186,0.00019461186,0.00014458019],"study_design_scores_gemma":[0.0042698234,0.00036658763,0.98668873,0.00003130232,0.0061592613,0.000121220124,0.0003589332,0.00009409452,0.000571983,0.0011944479,0.0000118128955,0.00013178028],"about_ca_topic_score_codex":0.00027209846,"about_ca_topic_score_gemma":0.00067055604,"teacher_disagreement_score":0.0061088465,"about_ca_system_score_codex":0.000394298,"about_ca_system_score_gemma":0.0018633575,"threshold_uncertainty_score":0.9177263},"labels":[],"label_agreement":null},{"id":"W4307592200","doi":"10.1186/s12913-022-08662-3","title":"Cost-utility analysis of caspofungin and fluconazole for primary treatment of invasive candidiasis and candidemia in Ethiopia","year":2022,"lang":"en","type":"article","venue":"BMC Health Services Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; Institute of Health Services and Policy Research; University Health Network","funders":"Canadian Institutes of Health Research","keywords":"Caspofungin; Fluconazole; Medicine; Voriconazole; Cost effectiveness; Intensive care medicine; Internal medicine; Antifungal","score_opus":0.0983021422763591,"score_gpt":0.44330207330913185,"score_spread":0.34499993103277277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307592200","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910938,0.006128473,0.000013966262,0.00026840952,0.000012551192,0.0019086034,0.0004991563,0.0000047910107,0.00007021106],"genre_scores_gemma":[0.9969467,0.0019943356,0.0003075399,0.00018502024,0.000010602406,0.00026652217,0.00019049054,0.000008816187,0.00008999304],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9975965,0.0005213314,0.00053899083,0.0004019364,0.00052190456,0.00041933235],"domain_scores_gemma":[0.99753624,0.0015015041,0.00013265695,0.00035496877,0.00023765494,0.00023697744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025990375,0.00010930625,0.0008097336,0.00057600735,0.00019638942,0.000006602617,0.00008366405,0.00006463288,0.000078327044],"category_scores_gemma":[0.00007703642,0.000096084674,0.000091168746,0.001167298,0.00014748641,0.000049832674,0.000110592766,0.00020071327,1.5545842e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022563566,0.00029813984,0.97841567,0.0053592,0.00015081788,0.0000047520875,0.0075521376,0.00001695585,0.00049194525,0.000029682325,0.000008575932,0.005415796],"study_design_scores_gemma":[0.0017375433,0.0012041783,0.98106146,0.00007813341,0.00010791296,0.0000015392371,0.012861734,0.0020840215,0.0004512468,0.000039820843,0.00031823505,0.000054180487],"about_ca_topic_score_codex":0.034481924,"about_ca_topic_score_gemma":0.10956756,"teacher_disagreement_score":0.07508564,"about_ca_system_score_codex":0.0006177033,"about_ca_system_score_gemma":0.0018474227,"threshold_uncertainty_score":0.97194755},"labels":[],"label_agreement":null},{"id":"W4307872561","doi":"10.33590/emj/10098860","title":"Cutaneous Mucormycosis Co-infection in a Patient with COVID-19","year":2022,"lang":"en","type":"article","venue":"European Medical Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Medicine; Eschar; Surgery; Fulminant; Extracorporeal membrane oxygenation; Mucormycosis; Intensive care unit; Respiratory failure; Renal replacement therapy; Salvage therapy; Internal medicine; Chemotherapy","score_opus":0.017917143349102008,"score_gpt":0.2938684421880808,"score_spread":0.2759512988389788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307872561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97952366,0.00013249331,0.001213758,0.0026507748,0.00017047396,0.00015733024,0.000004739602,0.000041223848,0.016105548],"genre_scores_gemma":[0.9918053,0.0002041587,0.00009436577,0.0073707746,0.00019527778,0.000003795943,0.0000102177155,0.000023368206,0.00029273567],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971344,0.00068552693,0.00039252947,0.00018881631,0.0013208726,0.0002778473],"domain_scores_gemma":[0.99868965,0.00010419233,0.0001189291,0.00016994937,0.000044696124,0.00087255257],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013874322,0.00011486345,0.00021945802,0.00014076674,0.00032738544,0.000021164651,0.000112535796,0.000025482146,0.0067905425],"category_scores_gemma":[0.0011404974,0.0000832643,0.00008592357,0.00025671773,0.00011070325,0.00004178453,0.00006783074,0.0012830915,0.000059922662],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030336906,0.0010410948,0.8036489,0.00007943059,0.00006882686,0.11556899,0.0024606094,0.00012897702,0.00028008528,0.000040777628,0.024965134,0.048683498],"study_design_scores_gemma":[0.007424952,0.007628259,0.3432249,0.00030538999,0.0001171425,0.19483799,0.0032642467,0.00041045886,0.000067759334,0.00010490486,0.4421515,0.00046248795],"about_ca_topic_score_codex":0.000050705927,"about_ca_topic_score_gemma":0.00006417125,"teacher_disagreement_score":0.46042398,"about_ca_system_score_codex":0.0005101139,"about_ca_system_score_gemma":0.0007138611,"threshold_uncertainty_score":0.9941174},"labels":[],"label_agreement":null},{"id":"W4308039771","doi":"10.1016/j.chom.2022.10.004","title":"Deep tissue infection by an invasive human fungal pathogen requires lipid-based suppression of the IL-17 response","year":2022,"lang":"en","type":"article","venue":"Cell Host & Microbe","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Genome Canada; Canada Research Chairs; Canadian Institute for Advanced Research; Merck","keywords":"Candida albicans; Biology; Corpus albicans; Microbiology; Lipid signaling; Immunology; Inflammation","score_opus":0.012282839420499327,"score_gpt":0.27077237094528217,"score_spread":0.2584895315247828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308039771","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976293,0.00040324693,0.00009806425,0.00026273562,0.00022156694,0.000592279,0.00022980488,0.000043612716,0.0005193761],"genre_scores_gemma":[0.9954207,0.000017834074,0.00006344942,0.00054925337,0.000073907,0.000031198048,0.0002069343,0.000032716558,0.0036040116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979488,0.0006709316,0.00035798814,0.0004080064,0.000340317,0.00027391655],"domain_scores_gemma":[0.99861217,0.0001613054,0.00021228979,0.00078151026,0.00012045433,0.00011229661],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006922228,0.00018635845,0.0002886124,0.000079547106,0.0005277914,0.000016012498,0.00022281031,0.0001044961,0.00092807837],"category_scores_gemma":[0.000177794,0.00014729926,0.00015107598,0.00026829357,0.00019262807,0.00008696146,0.0001801942,0.00037465172,0.000009495699],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018394253,0.0005223051,0.066913605,0.00012460203,0.000009485634,0.000019232952,0.000679888,0.000033239776,0.91689205,0.0000031404393,0.012756094,0.00020691585],"study_design_scores_gemma":[0.0010346828,0.001099156,0.12500682,0.00006469651,0.00006898798,0.000009384988,0.00037296803,0.000025625828,0.83856106,0.000010557096,0.0336003,0.00014577356],"about_ca_topic_score_codex":0.00026613811,"about_ca_topic_score_gemma":0.0002973653,"teacher_disagreement_score":0.07833102,"about_ca_system_score_codex":0.00019197087,"about_ca_system_score_gemma":0.00026746784,"threshold_uncertainty_score":0.9999852},"labels":[],"label_agreement":null},{"id":"W4308393775","doi":"10.1101/2022.11.07.515445","title":"Landscape-scale exposure to multiazole-resistant <i>Aspergillus fumigatus</i> bioaerosols","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Natural Environment Research Council; Sight Research UK; Albaha University; Canadian Institute for Advanced Research","keywords":"Aspergillus fumigatus; Microbiology; Biology; Aspergillosis; Spore; Aspergillus; Azole; Bioaerosol; Indoor bioaerosol; Antifungal; Immunology; Ecology; Chemistry; Aerosol","score_opus":0.013248000600871078,"score_gpt":0.23805742371890184,"score_spread":0.22480942311803076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308393775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899114,0.0029005092,0.00032316384,0.00096080155,0.0015727077,0.0021390624,0.001291178,0.00072730746,0.0001739088],"genre_scores_gemma":[0.99228066,0.0003012634,0.0041375034,0.0016114125,0.0007008672,0.000525845,0.000004995803,0.0002568339,0.00018060884],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9942063,0.00022342076,0.001077972,0.0020843311,0.0012568831,0.0011510579],"domain_scores_gemma":[0.99461895,0.00010235319,0.00039445722,0.0031455746,0.00066518754,0.0010734898],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010044989,0.0009846987,0.0014639378,0.00037458306,0.00042693198,0.00018982502,0.00078685035,0.00073709217,0.0010221783],"category_scores_gemma":[0.00040599136,0.0009916276,0.00056968455,0.000979557,0.00018873591,0.0001228812,0.0012104985,0.0019028978,0.00022744288],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011322034,0.0006197348,0.12453084,0.0011537733,0.00027795316,0.00041046026,0.00006143321,0.00010245744,0.8670214,0.00011498139,0.0045710383,0.000003773552],"study_design_scores_gemma":[0.002692181,0.00093899725,0.74492985,0.0011357458,0.0006005566,9.599176e-8,0.00010438712,0.00011757911,0.19312315,0.0000016270794,0.0542502,0.0021056365],"about_ca_topic_score_codex":0.000112507914,"about_ca_topic_score_gemma":0.000038156257,"teacher_disagreement_score":0.6738982,"about_ca_system_score_codex":0.0006846084,"about_ca_system_score_gemma":0.0012406094,"threshold_uncertainty_score":0.99989104},"labels":[],"label_agreement":null},{"id":"W4309138955","doi":"10.1371/journal.pone.0277097","title":"Rosemary essential oil and its components 1,8-cineole and α-pinene induce ROS-dependent lethality and ROS-independent virulence inhibition in Candida albicans","year":2022,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada; University of Illinois at Urbana-Champaign; Canada Foundation for Innovation; Canada Research Chairs; Saskatchewan Health Research Foundation; University of Regina; Brown University","keywords":"Essential oil; Rosmarinus; Reactive oxygen species; Candida albicans; Microbiology; Biology; Corpus albicans; Biofilm; Virulence; Chemistry; Botany; Biochemistry; Bacteria","score_opus":0.036701131504898,"score_gpt":0.24914902184628834,"score_spread":0.21244789034139033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309138955","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958558,0.0021541982,0.0000083688765,0.0011712275,0.000039816736,0.0003004404,0.00012627084,0.000029929206,0.0003139506],"genre_scores_gemma":[0.9974373,0.0010853715,0.000063814936,0.00030836902,0.00006568784,0.00006457506,0.000087645545,0.000021995955,0.0008652296],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.997693,0.00017826093,0.00039360116,0.0006268076,0.0007795556,0.00032874782],"domain_scores_gemma":[0.9992648,0.000074051306,0.00011013901,0.00025143093,0.00007319058,0.00022644072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005883022,0.00021297061,0.00049637933,0.0001249264,0.00024065886,0.00003304668,0.000055394714,0.0000945729,0.00019800392],"category_scores_gemma":[0.00011205323,0.00022076684,0.00003126403,0.00017570665,0.00012056841,0.00017550275,0.0003214582,0.00055138266,0.0000034714838],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079475454,0.0017422675,0.28383943,0.0005575666,0.00007755686,0.00023678668,0.00057910266,0.000003954061,0.7111137,0.0000646756,0.000013839759,0.0009763818],"study_design_scores_gemma":[0.003934807,0.00041669342,0.94281715,0.00042264897,0.00018277852,0.00008133105,0.00056635647,0.0008881412,0.05020702,0.00014053786,0.00002756239,0.0003149828],"about_ca_topic_score_codex":0.0013056624,"about_ca_topic_score_gemma":0.0012139505,"teacher_disagreement_score":0.6609067,"about_ca_system_score_codex":0.00018524217,"about_ca_system_score_gemma":0.00009037475,"threshold_uncertainty_score":0.90026104},"labels":[],"label_agreement":null},{"id":"W4309243908","doi":"10.1128/spectrum.03183-22","title":"<i>Candida albicans</i> Reactive Oxygen Species (ROS)-Dependent Lethality and ROS-Independent Hyphal and Biofilm Inhibition by Eugenol and Citral","year":2022,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Canada Foundation for Innovation; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Reactive oxygen species; Biofilm; Candida albicans; Microbiology; Eugenol; Chemistry; Lethality; Biology; Biochemistry; Toxicology; Bacteria; Genetics","score_opus":0.007727288663011106,"score_gpt":0.21591995549575843,"score_spread":0.20819266683274731,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309243908","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908638,0.0025561568,0.000054114927,0.0038302827,0.00013970296,0.0005336647,0.0009100814,0.00005225553,0.0010599163],"genre_scores_gemma":[0.9954524,0.00037468458,0.000063495485,0.0010142556,0.000084621715,0.000027162116,0.00037270147,0.00002231557,0.0025883426],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980622,0.00020118368,0.00032300942,0.0007910625,0.0001384585,0.00048406844],"domain_scores_gemma":[0.99933255,0.00007594023,0.00012328457,0.00026572283,0.000030147074,0.00017237199],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004682054,0.00027645394,0.00049438665,0.00009155876,0.00044377646,0.00003232015,0.0000692455,0.00016371331,0.0004443051],"category_scores_gemma":[0.000030544394,0.0002565103,0.00006911697,0.00010998855,0.00063738646,0.00008176508,0.00027438163,0.0005821435,0.000004577725],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007474306,0.00015928419,0.091770224,0.000045506666,0.0000938562,0.00009251935,0.00040128737,1.2947443e-7,0.90391994,0.00032037986,0.0022221683,0.00022727583],"study_design_scores_gemma":[0.006862353,0.002545179,0.50551754,0.00005359363,0.00033452307,0.003710279,0.005025943,0.000011295906,0.43408373,0.00197654,0.03892445,0.0009545879],"about_ca_topic_score_codex":0.00045361763,"about_ca_topic_score_gemma":0.00058505323,"teacher_disagreement_score":0.4698362,"about_ca_system_score_codex":0.0002369318,"about_ca_system_score_gemma":0.00008491081,"threshold_uncertainty_score":0.99998873},"labels":[],"label_agreement":null},{"id":"W4309363317","doi":"10.1503/cmaj.220713","title":"Mulch pneumonitis in a patient with chronic granulomatous disease","year":2022,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Tachypnea; Medicine; Chest radiograph; Pneumonitis; Auscultation; Physical examination; Emergency department; Chronic granulomatous disease; Pneumonia; Hypersensitivity pneumonitis; Disease; Radiography; Surgery; Tachycardia; Pathology; Radiology; Lung; Internal medicine","score_opus":0.00430219035957505,"score_gpt":0.2165253651037155,"score_spread":0.21222317474414046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309363317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9779604,0.0005437744,0.000012185383,0.019897051,0.00020254632,0.00018760085,0.000041470415,0.000011373754,0.0011435682],"genre_scores_gemma":[0.9938567,0.00006598779,0.00001553545,0.0054401164,0.00022692638,0.0000259569,0.000017853077,0.00001268577,0.00033823494],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972952,0.00017974466,0.00031091855,0.00016079086,0.001615133,0.0004382009],"domain_scores_gemma":[0.9978517,0.000063665335,0.00010971445,0.00010990161,0.00013618,0.0017287972],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007063618,0.00009080271,0.00020093675,0.00017110983,0.00032378655,0.000024914147,0.000095879215,0.00007023302,0.0052400767],"category_scores_gemma":[0.0005409737,0.000078894576,0.000075012664,0.00031821246,0.00003323602,0.000056758843,0.000016416903,0.001083066,0.000025864743],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.00013720854,0.000113834154,0.94158053,0.000020935775,0.00004092849,0.01850423,0.00033551754,0.000027698114,0.000009490782,0.00005480131,0.011412814,0.027761988],"study_design_scores_gemma":[0.0020256152,0.00045307862,0.8540243,0.00011761343,0.000032152217,0.0012369644,0.00081426266,0.00042234463,0.00000286476,0.00009672095,0.14062686,0.00014720381],"about_ca_topic_score_codex":0.0026936315,"about_ca_topic_score_gemma":0.09044464,"teacher_disagreement_score":0.12921405,"about_ca_system_score_codex":0.0045393794,"about_ca_system_score_gemma":0.008127278,"threshold_uncertainty_score":0.999282},"labels":[],"label_agreement":null},{"id":"W4309483659","doi":"10.1016/j.ijregi.2022.11.005","title":"New estimation of the prevalence of chronic pulmonary aspergillosis (CPA) related to pulmonary TB – a revised burden for India","year":2022,"lang":"en","type":"article","venue":"IJID Regions","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"","keywords":"Medicine; Incidence (geometry); Pulmonary tuberculosis; Coinfection; Pediatrics; Tuberculosis; Aspergillosis; Mortality rate; Internal medicine; Human immunodeficiency virus (HIV); Pathology; Immunology","score_opus":0.015525695948964123,"score_gpt":0.28077960564179316,"score_spread":0.265253909692829,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309483659","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9759556,0.0036890563,0.0012779447,0.011852821,0.00026897664,0.003404142,0.00018608707,0.00006284627,0.0033025409],"genre_scores_gemma":[0.984554,0.00014139262,0.0006460128,0.000095517615,0.00004508419,0.00010643421,0.00002498901,0.00001868004,0.014367879],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986837,0.00008174816,0.00039864666,0.00027836915,0.00037104805,0.00018651465],"domain_scores_gemma":[0.998841,0.000118228716,0.00019790731,0.0006494862,0.00009630115,0.00009710781],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002864334,0.00011361019,0.00027786056,0.00008559386,0.00018160486,0.0000027167036,0.00025107825,0.00006172626,0.00027864336],"category_scores_gemma":[0.00031034564,0.00008847329,0.00024220269,0.0005864494,0.000090889764,0.000054620923,0.00012561488,0.00018725617,0.000004074535],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005739045,0.0026803154,0.22218138,0.017354086,0.00080179697,0.00012291402,0.0069326744,0.013053376,0.49326673,0.016136568,0.06438334,0.15734778],"study_design_scores_gemma":[0.0019967025,0.0018619505,0.94203585,0.0022168632,0.0010584942,0.00017345007,0.0009461384,0.016971499,0.008986746,0.0040496984,0.019244742,0.00045787255],"about_ca_topic_score_codex":0.000074482,"about_ca_topic_score_gemma":0.000005766527,"teacher_disagreement_score":0.7198545,"about_ca_system_score_codex":0.00019912567,"about_ca_system_score_gemma":0.00047045783,"threshold_uncertainty_score":0.3607836},"labels":[],"label_agreement":null},{"id":"W4309544555","doi":"10.18502/cmm.8.3.11207","title":"Clinical, epidemiological, and mycological features of patients with candidemia: Experience in two tertiary referral centers in Iran","year":2022,"lang":"en","type":"article","venue":"Current Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Tehran University of Medical Sciences and Health Services","keywords":"Anidulafungin; Micafungin; Medicine; Fluconazole; Internal medicine; Voriconazole; Itraconazole; Caspofungin; Candida tropicalis; Epidemiology; Amphotericin B; Amphotericin B deoxycholate; Candida parapsilosis; Incidence (geometry); Posaconazole; Echinocandin; Antifungal; Dermatology","score_opus":0.07383927551767562,"score_gpt":0.42188862291684215,"score_spread":0.34804934739916654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309544555","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966535,0.0011367643,0.0000212376,0.0011454083,0.00033817472,0.0005521718,0.000013981249,0.000016800974,0.00012198525],"genre_scores_gemma":[0.99692893,0.0005150108,0.00009716242,0.0022220872,0.000046555753,0.00011389247,0.00005762209,0.0000074564678,0.000011280292],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964382,0.0010352847,0.00095689576,0.0006080172,0.00049873005,0.00046285868],"domain_scores_gemma":[0.9979984,0.0012098453,0.00018142862,0.00024475824,0.000037416794,0.0003281403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016669319,0.00018251991,0.00092497026,0.00013572056,0.00006681664,0.0000021524188,0.00021420867,0.0001786055,0.00087043666],"category_scores_gemma":[0.003536146,0.00011938824,0.0000859225,0.00029413472,0.0010871072,0.000039410952,0.0002750275,0.0015908394,0.00000117853],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021119865,0.0016619579,0.98672485,0.00006262906,0.000011124331,0.00013625706,0.0002429819,0.0000032084254,0.000017948143,0.00010488366,0.001403907,0.007518249],"study_design_scores_gemma":[0.004898253,0.0013871327,0.9909277,0.00010807409,0.000016898528,0.000013568817,0.0003817039,0.000052256302,0.0000022133672,0.00012429488,0.0019750393,0.000112840105],"about_ca_topic_score_codex":0.00012791839,"about_ca_topic_score_gemma":0.00044186323,"teacher_disagreement_score":0.007405409,"about_ca_system_score_codex":0.00014276656,"about_ca_system_score_gemma":0.00017364051,"threshold_uncertainty_score":0.9530671},"labels":[],"label_agreement":null},{"id":"W4310107622","doi":"10.1182/blood-2022-169665","title":"Epidemiology and Disease Burden of Mucormycosis in Canada: Canmus Registry","year":2022,"lang":"en","type":"article","venue":"Blood","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; Saint John Regional Hospital; Dalhousie University; Western University; University of Toronto; CancerCare Manitoba; University Health Network; University of Saskatchewan; Université de Montréal; Institut National de Santé Publique du Québec; Toronto General Hospital; McMaster University; Concordia University; McGill University; McGill University Health Centre; University of Ottawa; Juravinski Hospital; Queen's University; University of British Columbia","funders":"","keywords":"Epidemiology; Mucormycosis; Medicine; Disease registry; Disease; Gerontology; Family medicine; Intensive care medicine; Surgery; Pathology","score_opus":0.020061324100381698,"score_gpt":0.260050943015241,"score_spread":0.23998961891485932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310107622","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99464387,0.0030968105,0.0000018001417,0.0016445412,0.00003167207,0.00011507693,0.00006677807,0.000004112818,0.00039537088],"genre_scores_gemma":[0.9991565,0.00007179259,0.00005133611,0.0004056719,0.000023304932,0.000016078919,0.000014089284,0.0000046771174,0.00025656604],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99924845,0.00008558322,0.00022644472,0.00017094144,0.0001142351,0.00015437034],"domain_scores_gemma":[0.9993839,0.0001487139,0.00006081853,0.00022581765,0.000017724089,0.00016298363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027495518,0.000054953263,0.00025465977,0.00002742098,0.000034799108,3.1819008e-7,0.000049478713,0.000014883053,0.00011656235],"category_scores_gemma":[0.0008612725,0.00005143866,0.000027684098,0.000089689944,0.000048027006,0.000009622406,0.000056394187,0.0001359813,2.2722914e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014843527,0.000083268606,0.9979732,0.000096190815,0.000016389538,0.00016724369,0.00005164733,0.0000102653685,0.0002706465,0.00013832492,0.0007453237,0.00029907236],"study_design_scores_gemma":[0.0008885288,0.00006079221,0.9971578,0.000020458574,0.000063295454,0.000012914516,0.000672387,0.000054453183,0.00006190332,0.00020780659,0.00075156573,0.00004809673],"about_ca_topic_score_codex":0.836587,"about_ca_topic_score_gemma":0.6703057,"teacher_disagreement_score":0.16628131,"about_ca_system_score_codex":0.00012869453,"about_ca_system_score_gemma":0.0017063079,"threshold_uncertainty_score":0.33571035},"labels":[],"label_agreement":null},{"id":"W4310566124","doi":"10.1093/g3journal/jkac301","title":"Development and applications of a CRISPR activation system for facile genetic overexpression in <i>Candida albicans</i>","year":2022,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Guelph","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Burroughs Wellcome Fund","keywords":"Biology; CRISPR; Candida albicans; Genetic screen; Genome editing; Genetics; Computational biology; Microbiology; Gene; Phenotype","score_opus":0.01719991413771275,"score_gpt":0.26583669111672276,"score_spread":0.24863677697901002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310566124","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92741454,0.051556088,0.018904446,0.00004422889,0.00003275891,0.0016833679,0.00009260546,0.000022947574,0.0002490466],"genre_scores_gemma":[0.9838251,0.0016421914,0.013334191,0.000060132905,0.00004525375,0.00072666083,0.00007343311,0.000019369909,0.00027369137],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99881107,0.00003436084,0.00039555514,0.00030856323,0.00025348255,0.00019696869],"domain_scores_gemma":[0.99938494,0.000047795387,0.0001286531,0.00028556352,0.000079527774,0.00007350262],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016521777,0.00012364076,0.00025348258,0.00011345614,0.00016219229,0.000007071658,0.00009082197,0.000048974172,0.000031845007],"category_scores_gemma":[0.0000030301908,0.0001240742,0.000046428202,0.00020368939,0.000044833814,0.000015587379,0.000100677724,0.00007633269,9.682118e-7],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027244794,0.00016234182,0.08024524,0.0010960004,0.000034627064,0.0000015025234,0.0010705666,0.0006610039,0.27025694,0.00009248967,0.000063449515,0.64604336],"study_design_scores_gemma":[0.002916804,0.00047202437,0.09236362,0.0002098171,0.000091371345,0.000023330205,0.009090076,0.0013888068,0.32760212,0.00014122894,0.5652596,0.00044125665],"about_ca_topic_score_codex":0.000017062997,"about_ca_topic_score_gemma":0.000017910697,"teacher_disagreement_score":0.6456021,"about_ca_system_score_codex":0.00019294595,"about_ca_system_score_gemma":0.00023591658,"threshold_uncertainty_score":0.5059599},"labels":[],"label_agreement":null},{"id":"W4310946316","doi":"10.1128/mbio.02639-22","title":"A Small Molecule Inhibitor of Erg251 Makes Fluconazole Fungicidal by Inhibiting the Synthesis of the 14α-Methylsterols","year":2022,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Candida albicans; Fluconazole; Fungicide; Corpus albicans; Microbiology; Ergosterol; Small molecule; Biology; Chemistry; Antifungal; Biochemistry","score_opus":0.015304742542177965,"score_gpt":0.22936052209056948,"score_spread":0.2140557795483915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310946316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941309,0.00079059415,0.000033083074,0.0015025862,0.000094549854,0.00038056163,0.00012971602,0.000016894506,0.0029211235],"genre_scores_gemma":[0.99812967,0.0000081020435,0.00005709029,0.0004960365,0.000045367087,0.0000475301,0.0000063050497,0.000017674902,0.0011922348],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985139,0.00020995967,0.00039975706,0.00022438525,0.00042921174,0.00022283423],"domain_scores_gemma":[0.9989071,0.00030300606,0.00020586533,0.00046058462,0.0000794496,0.000044010892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063831767,0.00012764931,0.00031283117,0.000033032964,0.0001955855,0.0000076261967,0.00024397453,0.000048242666,0.00025475246],"category_scores_gemma":[0.0003874173,0.00007709557,0.00023307369,0.00027078472,0.0002073432,0.00002237791,0.0002315671,0.00027881324,0.0000038046658],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028854792,0.0002536127,0.050786093,0.000169051,0.00006827805,0.000005528401,0.0006728827,0.000007523181,0.9423851,0.00014887267,0.002997932,0.0022166166],"study_design_scores_gemma":[0.00043047147,0.00017111818,0.022134112,0.000100018464,0.000105159714,0.000008346549,0.0026293548,0.00007389453,0.97261417,0.000059567355,0.0015809396,0.0000928587],"about_ca_topic_score_codex":0.00012708637,"about_ca_topic_score_gemma":0.000049571558,"teacher_disagreement_score":0.030229095,"about_ca_system_score_codex":0.000054969943,"about_ca_system_score_gemma":0.000101010286,"threshold_uncertainty_score":0.3143866},"labels":[],"label_agreement":null},{"id":"W4311525598","doi":"10.1093/ofid/ofac492.065","title":"872. Voriconazole Therapeutic Drug Monitoring (TDM): How Common is Autoinduction?","year":2022,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Alberta Health Services; University of Alberta","funders":"","keywords":"Voriconazole; Medicine; Therapeutic drug monitoring; Dosing; Discontinuation; Internal medicine; Pharmacokinetics; Therapeutic index; CYP2C19; Concomitant; Drug; Pharmacology","score_opus":0.02077365119182781,"score_gpt":0.3079579463700808,"score_spread":0.28718429517825295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311525598","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.978868,0.0021579831,0.000031037966,0.0053687794,0.0009776847,0.0010228436,0.000113186084,0.00021916757,0.011241324],"genre_scores_gemma":[0.9879907,0.00008304245,0.000013635982,0.0014784671,0.00015205765,0.0002732186,0.000050199204,0.00004124714,0.009917438],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99832237,0.00013323867,0.00022261438,0.00045659806,0.000457901,0.00040729155],"domain_scores_gemma":[0.99890345,0.000073456045,0.00012159753,0.0005956867,0.00008925483,0.00021655306],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019500365,0.0002172214,0.00039051127,0.000095427684,0.0011186143,0.000198485,0.00029468237,0.000039040642,0.001528348],"category_scores_gemma":[0.000042094216,0.00020500048,0.00021656409,0.0003767766,0.000083183266,0.00038278196,0.0004383783,0.00034219533,0.000057556426],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002176848,0.00075554044,0.9732744,0.000043807777,0.00012477317,0.000029557594,0.00018985977,0.000014894752,0.0003534857,0.00047434343,0.0156210475,0.008900572],"study_design_scores_gemma":[0.001720026,0.00046281138,0.95444155,0.000042320582,0.00026041473,0.000054508644,0.003600673,0.00007903077,0.001039817,0.0031782442,0.03478615,0.00033444996],"about_ca_topic_score_codex":0.00045785916,"about_ca_topic_score_gemma":0.0000602112,"teacher_disagreement_score":0.019165104,"about_ca_system_score_codex":0.0003902279,"about_ca_system_score_gemma":0.00024198495,"threshold_uncertainty_score":0.9993844},"labels":[],"label_agreement":null},{"id":"W4311584845","doi":"10.1126/scitranslmed.abq6682","title":"A B1a–natural IgG–neutrophil axis is impaired in viral- and steroid-associated aspergillosis","year":2022,"lang":"en","type":"article","venue":"Science Translational Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Immunology; Aspergillus fumigatus; Aspergillosis; Context (archaeology); Antibody; Pneumonia; Innate immune system; Aspergillus; Biology; Medicine; Virology; Immune system; Microbiology; Internal medicine","score_opus":0.01892456816220497,"score_gpt":0.29367052892420015,"score_spread":0.2747459607619952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311584845","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97046775,0.0012846711,0.00002178804,0.0266623,0.00017965518,0.00034268945,0.00003350904,0.000034480647,0.0009731311],"genre_scores_gemma":[0.9975413,0.000048073,0.00012347924,0.0017371783,0.0000577245,0.000022012111,0.000029772249,0.000009711606,0.0004307161],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997271,0.00007251189,0.00038844414,0.0005273786,0.0013680785,0.00037261343],"domain_scores_gemma":[0.99927473,0.00012600429,0.00007193585,0.0002169254,0.00013080274,0.00017958111],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013484983,0.00015769895,0.00035037557,0.0003495623,0.0003990008,0.000011157408,0.00017250529,0.000031122534,0.000786222],"category_scores_gemma":[0.0002400607,0.00012518575,0.000059915597,0.0013155625,0.0009864512,0.00022074605,0.000042218035,0.00037385212,0.0000034351438],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007349018,0.00036702096,0.84411514,0.000062978834,0.00003958021,0.00007208299,0.006789822,0.00003074342,0.13695742,0.0012579791,0.000603821,0.008968499],"study_design_scores_gemma":[0.0027641854,0.00060544634,0.9904285,0.000078976904,0.00003740336,0.000024204237,0.0007872802,0.0028702673,0.00028667776,0.0017353228,0.0002494365,0.00013231546],"about_ca_topic_score_codex":0.00028436162,"about_ca_topic_score_gemma":0.00015921888,"teacher_disagreement_score":0.14631334,"about_ca_system_score_codex":0.00022115631,"about_ca_system_score_gemma":0.0003255475,"threshold_uncertainty_score":0.8608579},"labels":[],"label_agreement":null},{"id":"W4312109837","doi":"10.7759/cureus.32884","title":"Rhino-Orbital Cerebral Mucormycosis in a Non-diabetic Patient Following COVID-19 Infection: A Case Report and Literature Review","year":2022,"lang":"en","type":"article","venue":"Cureus","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Alexandra Hospital","funders":"","keywords":"Medicine; Chemosis; Mucormycosis; Ptosis; Surgery; Etiology; Meningoencephalitis; Anisocoria; Diabetes mellitus; Dermatology; Internal medicine; Pathology","score_opus":0.016001383611351394,"score_gpt":0.3043353053782287,"score_spread":0.28833392176687733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312109837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95202994,0.04542027,0.00001395697,0.0009227101,0.00026700337,0.0007322878,0.000021648968,0.000038012287,0.0005541416],"genre_scores_gemma":[0.99561447,0.0012911359,0.00010054768,0.00249761,0.000047831472,0.00014737814,0.000062060375,0.000014885024,0.00022405406],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9985016,0.00010672355,0.00044646763,0.0004190551,0.00029103743,0.00023512903],"domain_scores_gemma":[0.9991316,0.00006518,0.00010895203,0.0004093624,0.00004427176,0.00024059694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005846367,0.000157377,0.0003972168,0.00007306013,0.00022043499,0.000022757204,0.000038680522,0.000059976806,0.0002650985],"category_scores_gemma":[0.0008738998,0.00014141614,0.0001712034,0.0004890008,0.000033526823,0.00012367188,0.00012228932,0.00041901384,0.0000029444336],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009462644,0.0002817097,0.67805445,0.0022985097,0.000053666892,0.31024396,0.0020321712,0.0000024045783,0.000093206465,0.000017230857,0.005862041,0.0009660471],"study_design_scores_gemma":[0.0075395317,0.0038369682,0.34668067,0.008704087,0.0011805457,0.56610274,0.004025165,0.0004106707,0.00012631394,0.00050801755,0.059302885,0.0015823955],"about_ca_topic_score_codex":0.0005690969,"about_ca_topic_score_gemma":0.00051427813,"teacher_disagreement_score":0.33137375,"about_ca_system_score_codex":0.0004094571,"about_ca_system_score_gemma":0.00022226995,"threshold_uncertainty_score":0.5766783},"labels":[],"label_agreement":null},{"id":"W4312197754","doi":"10.1101/2022.12.22.521687","title":"Identification and Elimination of Antifungal Tolerance in <i>Candida auris</i>","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Science Education Institute, Department of Science and Technology, Republic of the Philippines; Government of Canada; Alberta Precision Laboratories; University of Alberta; Government of Alberta","keywords":"Candida auris; Fluconazole; Echinocandin; Antifungal drug; Antifungal; Fungal pathogen; Antifungal drugs; Biology; Microbiology; Drug resistance; Multiple drug resistance; Pathogen","score_opus":0.011309300243485663,"score_gpt":0.2461789292765439,"score_spread":0.23486962903305822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312197754","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960878,0.0019052075,0.00033246385,0.00023858475,0.00040462945,0.00078547123,0.0001499215,0.00007288965,0.000023059205],"genre_scores_gemma":[0.9983963,0.0007383504,0.00049545476,0.00008623126,0.00009804693,0.00011300499,0.0000012165001,0.000047019817,0.000024419129],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99760956,0.0001276107,0.0007176361,0.00078393094,0.00048368447,0.00027760226],"domain_scores_gemma":[0.9981677,0.00006221711,0.0004345295,0.0008879795,0.00032861027,0.00011899199],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00096987747,0.00028420502,0.00061475154,0.00029824532,0.000083926,0.000042717675,0.00018679688,0.00026609944,0.00008706756],"category_scores_gemma":[0.00030839475,0.00032042366,0.00010415329,0.00047765387,0.00014781377,0.00012256311,0.00023062865,0.0006800147,0.000004464417],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019195191,0.0002350701,0.33136594,0.0013012674,0.000034710163,0.000034478555,0.000027143566,0.000027016737,0.6663413,0.0003204393,0.000114262155,0.0000064046094],"study_design_scores_gemma":[0.00058893004,0.000058907954,0.86126316,0.0003863069,0.000080151156,1.4485141e-8,0.000014064219,0.00042184436,0.13657595,0.0000031487823,0.0003726831,0.00023481893],"about_ca_topic_score_codex":0.000080203885,"about_ca_topic_score_gemma":0.000011162899,"teacher_disagreement_score":0.5298972,"about_ca_system_score_codex":0.0002738919,"about_ca_system_score_gemma":0.00045250513,"threshold_uncertainty_score":0.9999248},"labels":[],"label_agreement":null},{"id":"W4312833903","doi":"10.22374/cjgim.v16i3.487","title":"Transient Mucor circinelloides fungemia","year":2021,"lang":"en","type":"article","venue":"Canadian Journal of General Internal Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Ottawa; Queen's University","funders":"","keywords":"Mucor circinelloides; Medicine; Fungemia; Amphotericin B; Mucormycosis; Blood culture; Mucor; Microbiology; Immunology; Pathology; Mycosis; Antibiotics; Dermatology; Biology; Aspergillus","score_opus":0.026221282777993345,"score_gpt":0.286201445216955,"score_spread":0.25998016243896166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312833903","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9585595,0.010301069,0.00164595,0.013083764,0.0017501805,0.000084073145,0.000010379287,0.0000065011272,0.0145585425],"genre_scores_gemma":[0.9744145,0.00026827102,0.0005723343,0.0037567664,0.0018879159,7.0911636e-7,0.000008865243,0.000020244872,0.019070351],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99830574,0.000061559665,0.0007005295,0.0001962534,0.0003726062,0.0003632939],"domain_scores_gemma":[0.9972168,0.000052722462,0.00017331197,0.00024754938,0.0008899892,0.001419591],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00041206964,0.00017117073,0.0005803216,0.0002549177,0.000068206995,0.000017967122,0.00015837452,0.000092685106,0.0030963907],"category_scores_gemma":[0.0006523621,0.00012542067,0.00023170875,0.0002462308,0.00025867543,0.000086269654,0.000007292755,0.00050089974,0.000018957042],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008526165,0.00012964595,0.27320015,0.0003216507,0.0006844623,0.0348897,0.0023045184,0.00004499143,0.3683778,0.00076712936,0.2956761,0.022751214],"study_design_scores_gemma":[0.0066402596,0.002976337,0.6222278,0.0037544114,0.00080060767,0.015726684,0.0027582038,0.0002063826,0.04862337,0.0007851616,0.29503992,0.0004608342],"about_ca_topic_score_codex":0.0037017437,"about_ca_topic_score_gemma":0.017475767,"teacher_disagreement_score":0.34902766,"about_ca_system_score_codex":0.00028510598,"about_ca_system_score_gemma":0.0019405612,"threshold_uncertainty_score":0.9978149},"labels":[],"label_agreement":null},{"id":"W4313384995","doi":"10.4049/jimmunol.198.supp.125.24","title":"IL-17A-producing CD4+Foxp3+ T cells in chronic pulmonary aspergillosis","year":2017,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kootenay Association for Science & Technology","funders":"","keywords":"FOXP3; Aspergillus fumigatus; Immunology; Interleukin 17; Immune system; Population; T cell; Medicine; Biology","score_opus":0.021422824950319042,"score_gpt":0.2878501699862583,"score_spread":0.26642734503593923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313384995","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881532,0.0059831394,0.000027481688,0.0031472929,0.00045923283,0.00011763382,0.0000018830897,0.0000054997076,0.0021046335],"genre_scores_gemma":[0.99462193,0.003830673,0.00007661433,0.000117965574,0.0002942809,8.5518207e-7,5.28145e-7,0.00001321226,0.0010439276],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987649,0.00015232674,0.00047844206,0.00012964255,0.00018308256,0.0002916236],"domain_scores_gemma":[0.9983656,0.00012365573,0.0004702737,0.00085102936,0.00014428132,0.000045197157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013391675,0.00012207581,0.00042903074,0.00010311836,0.0002318051,0.000015608794,0.00049262686,0.00011160022,0.00016958725],"category_scores_gemma":[0.00039587944,0.00007498767,0.00013730518,0.00006237435,0.0003834055,0.00016324654,0.00011253526,0.0007083495,0.000049687867],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015243611,0.0001447599,0.046543766,0.000048506685,0.0001604807,0.00031461442,0.00052966474,0.000021698288,0.93561494,0.00006232541,0.00030515404,0.014729712],"study_design_scores_gemma":[0.0010938519,0.0006953807,0.93098056,0.00027736375,0.000113723785,0.00062427594,0.00053443917,0.00003541934,0.063048385,0.00045151619,0.0020479814,0.000097126904],"about_ca_topic_score_codex":0.00018736428,"about_ca_topic_score_gemma":0.00012144553,"teacher_disagreement_score":0.8844368,"about_ca_system_score_codex":0.00029062238,"about_ca_system_score_gemma":0.00029545734,"threshold_uncertainty_score":0.30774656},"labels":[],"label_agreement":null},{"id":"W4313404632","doi":"10.4049/jimmunol.208.supp.58.08","title":"T cell intrinsic Nod2 controls Th17 immunity to <i>Candida albicans</i> infection","year":2022,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Candida albicans; NOD2; Immunology; T cell; Immunity; Biology; Immune system; Microbiology; Innate immune system","score_opus":0.010482997023932444,"score_gpt":0.2545797889021005,"score_spread":0.24409679187816805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313404632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919424,0.00220997,0.00035546243,0.0028034425,0.00053709664,0.00023367952,0.000005752565,0.000012017289,0.0019001997],"genre_scores_gemma":[0.99678516,0.00045111822,0.000039597817,0.0017228638,0.00011312726,0.0000054503535,0.0000024637184,0.000011488134,0.00086872006],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99846023,0.00054382544,0.00043664325,0.00008032613,0.00025172794,0.00022723425],"domain_scores_gemma":[0.9987859,0.0002641335,0.0002980481,0.00037059054,0.00021614572,0.00006518403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001420233,0.00010649338,0.0003820226,0.00013248782,0.0003219787,0.000007417857,0.00023930607,0.000046635465,0.00080551294],"category_scores_gemma":[0.00020978934,0.00007056281,0.00013527776,0.00025315123,0.00012358351,0.00005805569,0.00015007774,0.000999713,0.000031913994],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01811835,0.00094777683,0.056304198,0.00003974665,0.0005389876,0.00011140844,0.0026964135,0.00022476327,0.89473385,0.00022284122,0.0117430445,0.014318618],"study_design_scores_gemma":[0.0067008203,0.008660973,0.80944204,0.000051838695,0.00054346584,0.002163344,0.003984188,0.000011972967,0.01841126,0.0005441925,0.14923847,0.00024745057],"about_ca_topic_score_codex":0.00040170614,"about_ca_topic_score_gemma":0.000051573625,"teacher_disagreement_score":0.87632257,"about_ca_system_score_codex":0.00023394782,"about_ca_system_score_gemma":0.00023705329,"threshold_uncertainty_score":0.88198024},"labels":[],"label_agreement":null},{"id":"W4313413786","doi":"10.3390/jof9010040","title":"Human Airway Epithelium Responses to Invasive Fungal Infections: A Critical Partner in Innate Immunity","year":2022,"lang":"en","type":"review","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Advancing Translational Sciences; Harvard Catalyst; National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; National Institutes of Health; National Center for Research Resources; Canadian Institute for Advanced Research","keywords":"Biology; Innate immune system; Immune system; Immunology; Immunity; Respiratory epithelium; Epithelium","score_opus":0.09686149853542238,"score_gpt":0.42152535103888755,"score_spread":0.3246638525034652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313413786","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009442945,0.9874129,0.000013659088,0.0003013906,0.00051040074,0.0006411432,0.000059880804,0.000017391818,0.0016002515],"genre_scores_gemma":[0.012664179,0.98487496,0.00014090182,0.00028286563,0.00043227404,0.000052570547,0.000012945719,0.000056349632,0.0014829619],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9954177,0.0013436786,0.0017694067,0.00031783152,0.00071133306,0.0004400389],"domain_scores_gemma":[0.9959544,0.0022065404,0.00055017945,0.0005829622,0.00032490666,0.00038102537],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0028395134,0.00039734485,0.0023879977,0.0011218825,0.0002222442,0.0000455449,0.0003421499,0.00028562278,0.0016630206],"category_scores_gemma":[0.0072352607,0.0003050724,0.0010491434,0.0009609009,0.00013337683,0.00017326213,0.00019903982,0.002758714,0.00006702283],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031206661,0.0064413827,0.024472319,0.052577697,0.0018002534,0.010392414,0.0019262288,0.000004161005,0.00049707276,0.0017732644,0.021379014,0.87561554],"study_design_scores_gemma":[0.00061409053,0.0026389498,0.011589753,0.01595935,0.0010774914,0.0014451348,0.00038588955,1.6135131e-7,0.000013939044,0.00014078389,0.96577346,0.00036097196],"about_ca_topic_score_codex":0.0000331803,"about_ca_topic_score_gemma":0.000116493626,"teacher_disagreement_score":0.94439447,"about_ca_system_score_codex":0.00082526007,"about_ca_system_score_gemma":0.002011939,"threshold_uncertainty_score":0.99994016},"labels":[],"label_agreement":null},{"id":"W4313655592","doi":"10.1016/j.tcsw.2023.100095","title":"Understanding Aspergillus fumigatus galactosaminogalactan biosynthesis: A few questions remain","year":2023,"lang":"en","type":"review","venue":"The Cell Surface","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Institute of Infection and Immunity; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Australian Government","keywords":"Aspergillus fumigatus; Secretion; Microbiology; Biofilm; Biology; Antifungal; Virulence; Immune system; Biosynthesis; Biochemistry; Gene; Immunology; Bacteria; Genetics","score_opus":0.32281709876432113,"score_gpt":0.37254579316896375,"score_spread":0.049728694404642615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313655592","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029427322,0.98299825,0.00019237395,0.00035790604,0.00037716224,0.0015849954,0.00009590862,0.00039997435,0.01369914],"genre_scores_gemma":[0.009003181,0.9703123,0.0001351359,0.000053769156,0.00019542925,0.000024918289,0.00008441291,0.00017873685,0.020012097],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99639994,0.0005780516,0.0008456487,0.0007891012,0.0006262806,0.00076097826],"domain_scores_gemma":[0.99616647,0.0015355196,0.0003863933,0.0015366036,0.00007741138,0.00029759877],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014811741,0.0006878327,0.002110928,0.00014229846,0.00044584507,0.000081172744,0.00045723343,0.00054308964,0.00026599443],"category_scores_gemma":[0.0004761367,0.0004281312,0.0009894341,0.0010616654,0.0003375897,0.00006680089,0.00015976676,0.0011592219,0.0014990915],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014826345,0.0035667878,0.002491775,0.6298722,0.009634308,0.004066787,0.005557567,0.00009499487,0.0024803556,0.020118656,0.10194513,0.21868882],"study_design_scores_gemma":[0.00045589675,0.0001719061,0.00018570847,0.041081198,0.005334796,0.00008492466,0.001343486,0.00003994065,0.000081147446,0.00052473,0.94967306,0.0010231866],"about_ca_topic_score_codex":0.00008871252,"about_ca_topic_score_gemma":0.00015476125,"teacher_disagreement_score":0.84772795,"about_ca_system_score_codex":0.0011994758,"about_ca_system_score_gemma":0.00083671464,"threshold_uncertainty_score":0.9998171},"labels":[],"label_agreement":null},{"id":"W4316927633","doi":"10.1093/molbev/msad009","title":"Antifungal Drug Concentration Impacts the Spectrum of Adaptive Mutations in <i>Candida albicans</i>","year":2023,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; University of Minnesota; Burroughs Wellcome Fund","keywords":"Biology; Antifungal drug; Candida albicans; Fluconazole; Adaptation (eye); Drug; Phenotype; Drug resistance; Genetics; Genotype; Evolutionary biology; Antifungal; Gene; Microbiology; Pharmacology","score_opus":0.008476052408882878,"score_gpt":0.2836484959446286,"score_spread":0.2751724435357457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4316927633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99436206,0.0006107321,0.0027792957,0.0013954741,0.00005109094,0.0002295518,0.000015745964,0.00001816318,0.0005379069],"genre_scores_gemma":[0.99960506,0.000090963775,0.00003784919,0.00009830434,0.000017306646,0.000007120655,0.00006760136,0.0000037681439,0.0000720049],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993644,0.00010540418,0.0001564775,0.00015135958,0.00006234525,0.00016004733],"domain_scores_gemma":[0.9997143,0.000057056313,0.000047342903,0.000113891016,0.000034490753,0.000032896824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026759386,0.00006453984,0.00013375729,0.00005125947,0.00006126378,0.000002669383,0.000029121373,0.00006594117,0.0000131592],"category_scores_gemma":[0.000104804145,0.000045929515,0.000038817103,0.0003043004,0.00025107063,0.000030309144,0.000014687472,0.000108240645,0.000006136178],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029958377,0.00004447778,0.67818135,0.000025888687,0.000032223634,0.000015927353,0.00037772357,0.000037581227,0.30399495,0.01649591,0.00020855613,0.0002858327],"study_design_scores_gemma":[0.00051560136,0.00014964533,0.97930837,0.000034820856,0.000029757797,0.0000060507477,0.00045366018,0.0012123942,0.011773362,0.0064299465,0.000036920945,0.000049453603],"about_ca_topic_score_codex":0.0002922179,"about_ca_topic_score_gemma":0.00039393676,"teacher_disagreement_score":0.30112702,"about_ca_system_score_codex":0.00004111205,"about_ca_system_score_gemma":0.00008663184,"threshold_uncertainty_score":0.18729512},"labels":[],"label_agreement":null},{"id":"W4317902594","doi":"10.14740/jocmr4835","title":"Rapid Cytological Diagnosis With Evaluation of Pre- and Post-Therapeutic Fungal Morphological Characteristics in Mucormycosis","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Medicine Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Histopathology; Mucormycosis; Medicine; Biopsy; Pathology; Cytology; Mycosis; Gold standard (test); Surgery; Radiology","score_opus":0.39231191325466913,"score_gpt":0.5522076965827842,"score_spread":0.1598957833281151,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317902594","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882862,0.0015408735,0.000015552818,0.0092192255,0.00011533093,0.0005104262,0.0000051107945,0.000008717557,0.00029853854],"genre_scores_gemma":[0.9908991,0.008225379,0.00012309944,0.00023385817,0.0004216028,0.000019178922,0.0000065104523,0.000012183746,0.00005909392],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99295104,0.0017755106,0.0018947049,0.00030314946,0.0026881243,0.0003874875],"domain_scores_gemma":[0.98886627,0.0071862647,0.00046678056,0.00029000558,0.0028127553,0.00037794968],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.034380212,0.00013882911,0.0012765519,0.0004977096,0.000052255426,0.000008196849,0.00017888597,0.0002622008,0.00043497162],"category_scores_gemma":[0.03217517,0.00007453371,0.00014053487,0.00094492704,0.0012660078,0.00008451415,0.00007456672,0.0016061943,0.0000073612214],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0067395456,0.00059541897,0.85613453,0.00013649366,0.00008801357,0.0005247629,0.00016548565,7.660517e-7,0.0015050776,0.00003522571,0.00040728625,0.1336674],"study_design_scores_gemma":[0.0047095492,0.013943858,0.9780428,0.0008371459,0.00020906856,0.00019375098,0.0007725903,0.00047998904,0.00016007514,0.0003544359,0.0002312026,0.00006556753],"about_ca_topic_score_codex":0.000025702659,"about_ca_topic_score_gemma":0.00001674829,"teacher_disagreement_score":0.13360183,"about_ca_system_score_codex":0.000079028854,"about_ca_system_score_gemma":0.000621856,"threshold_uncertainty_score":0.99430877},"labels":[],"label_agreement":null},{"id":"W4318195451","doi":"10.1101/2023.01.24.524502","title":"The Adr1 transcription factor directs regulation of the ergosterol pathway and azole resistance in C. <i>albicans</i>","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Concordia University; Université Laval; Montreal Heart Institute","funders":"Natural Sciences and Engineering Research Council of Canada; Concordia University","keywords":"Candida albicans; Transcription factor; Ergosterol; Zinc finger transcription factor; Corpus albicans; Biochemistry; Biology; Saccharomyces cerevisiae; Chemistry; Cell biology; Zinc finger; Gene; Microbiology","score_opus":0.01920836082001145,"score_gpt":0.22673673736301683,"score_spread":0.20752837654300538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318195451","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99441206,0.0023313828,0.000083531384,0.0011614859,0.000579747,0.0011187756,0.00018503626,0.00010854156,0.00001946347],"genre_scores_gemma":[0.9984917,0.0008464088,0.00017411984,0.00009234555,0.00011054115,0.00009439719,3.645006e-7,0.00006322949,0.00012690874],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976405,0.00021691395,0.0006230716,0.0006526328,0.0005099925,0.0003569214],"domain_scores_gemma":[0.9978198,0.00017238165,0.00034562068,0.0012551985,0.00029475157,0.00011223802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075871166,0.0003208725,0.0005043024,0.00009981407,0.00017992903,0.00006183487,0.00028222427,0.00034975423,0.0000066038506],"category_scores_gemma":[0.0004317399,0.00022060759,0.00016222792,0.00049122487,0.0002924915,0.00008660755,0.00014349629,0.00064656744,0.0000042715947],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033993568,0.00006963752,0.13885707,0.0008896161,0.00005517965,0.000007696445,0.00006796946,0.000004854573,0.8590995,0.0004283916,0.00017207628,0.00000806732],"study_design_scores_gemma":[0.00046677212,0.000024455374,0.8503762,0.0010670661,0.000050107126,4.464671e-9,0.000009766763,0.00004873497,0.14612189,0.00001632664,0.0016429138,0.00017575372],"about_ca_topic_score_codex":0.00007920936,"about_ca_topic_score_gemma":0.00074143475,"teacher_disagreement_score":0.7129776,"about_ca_system_score_codex":0.00021597077,"about_ca_system_score_gemma":0.00045414426,"threshold_uncertainty_score":0.89961165},"labels":[],"label_agreement":null},{"id":"W4318482140","doi":"10.1128/spectrum.04618-22","title":"Development and Application of a Short Tandem Repeat Multiplex Typing Assay for Candida tropicalis","year":2023,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Radboud Universitair Medisch Centrum; Indian Council of Medical Research; Canadian Institute for Advanced Research","keywords":"Candida tropicalis; Typing; Biology; Genotyping; Genotype; Multiplex; Multiplex polymerase chain reaction; Tandem repeat; Genetics; Variable number tandem repeat; Single-nucleotide polymorphism; Microbiology; Polymerase chain reaction; Yeast; Genome; Gene","score_opus":0.020224190090998177,"score_gpt":0.28484494128018123,"score_spread":0.26462075118918305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318482140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99171615,0.00013117884,0.0067836433,0.00064497296,0.000041201343,0.00046970465,0.000022274116,0.00005197139,0.00013891218],"genre_scores_gemma":[0.99657196,0.000030317451,0.0025731283,0.00010651384,0.000039695442,0.00003874036,0.00020230787,0.00000903483,0.00042832035],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99925905,0.000018974943,0.00023285176,0.00026217307,0.000024209645,0.00020271068],"domain_scores_gemma":[0.99964696,0.0000783314,0.00003944609,0.00016180456,0.00003272042,0.00004070614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002586388,0.00008494294,0.00024927524,0.000059817015,0.00006889094,0.0000025622994,0.00004004209,0.000104204475,0.0000107883825],"category_scores_gemma":[0.000081765706,0.000070217255,0.000046197107,0.00011397381,0.000101808684,0.000012204557,0.000029254876,0.00006813561,0.0000083260475],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001549886,0.000028200157,0.30600688,0.00008254419,0.00004810035,0.0000020248592,0.000185412,4.2848336e-7,0.6879117,0.00024048633,0.0005397602,0.0047994885],"study_design_scores_gemma":[0.0011164107,0.00018161706,0.7114549,0.000057791603,0.00005910623,0.000030910043,0.00032921744,0.00037895542,0.22333626,0.00017915356,0.06269943,0.00017622572],"about_ca_topic_score_codex":0.000027553073,"about_ca_topic_score_gemma":0.00067031465,"teacher_disagreement_score":0.46457544,"about_ca_system_score_codex":0.00006082262,"about_ca_system_score_gemma":0.00006155753,"threshold_uncertainty_score":0.28633764},"labels":[],"label_agreement":null},{"id":"W4318754550","doi":"10.1080/19490976.2023.2167171","title":"<i>Candida albicans</i> can foster gut dysbiosis and systemic inflammation during HIV infection","year":2023,"lang":"en","type":"article","venue":"Gut Microbes","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Canadian Institutes of Health Research","funders":"","keywords":"Candida albicans; Dysbiosis; Biology; Immune system; Immunology; Gut flora; Corpus albicans; Population; Microbiology; Immunity; Host (biology); Human immunodeficiency virus (HIV); Medicine; Genetics","score_opus":0.01024202828742446,"score_gpt":0.24071171724892423,"score_spread":0.23046968896149977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318754550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99752855,0.00021584144,0.000035146593,0.0010072379,0.00011569754,0.0003277673,0.000020535032,0.00017552817,0.0005736945],"genre_scores_gemma":[0.9958516,0.00041888066,0.000028028002,0.00012069774,0.00016195216,0.000020268139,0.000060496874,0.000019074312,0.003319049],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990479,0.00003828636,0.00025798427,0.00027784257,0.00013299558,0.00024501156],"domain_scores_gemma":[0.9995114,0.000036407986,0.0000649953,0.00022970671,0.00007220952,0.00008526044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017326143,0.00013709273,0.00023217197,0.00013960828,0.00014310637,0.000036344773,0.000034588953,0.00009598869,0.00005162196],"category_scores_gemma":[0.00007304815,0.000121567835,0.000063678206,0.00025597838,0.000062498446,0.00010272737,0.0000506938,0.0001212043,0.00011180845],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060996663,0.000008579495,0.36329734,0.0005221634,0.000024935849,0.000013429074,0.00046986312,0.0000023002083,0.6334325,0.000007814986,0.0012291849,0.0009309],"study_design_scores_gemma":[0.0009540673,0.000055504213,0.93076336,0.0005618285,0.00008515072,0.00009751792,0.000381857,0.000045866647,0.06491447,0.000032109914,0.0019389405,0.00016929174],"about_ca_topic_score_codex":0.00020347575,"about_ca_topic_score_gemma":0.0007033469,"teacher_disagreement_score":0.56851804,"about_ca_system_score_codex":0.00011211153,"about_ca_system_score_gemma":0.000047357855,"threshold_uncertainty_score":0.49573925},"labels":[],"label_agreement":null},{"id":"W4319166170","doi":"10.1016/j.isci.2023.106145","title":"Functional genomic analysis of Candida albicans protein kinases reveals modulators of morphogenesis in diverse environments","year":2023,"lang":"en","type":"article","venue":"iScience","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Genome Canada; Canadian Institute for Advanced Research","keywords":"Candida albicans; Morphogenesis; Filamentation; Biology; Corpus albicans; Cell biology; Kinase; Transcription factor; Mutant; Fungal protein; Virulence; Gene; Genetics","score_opus":0.030118726213712546,"score_gpt":0.27136733841941313,"score_spread":0.2412486122057006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319166170","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99939376,0.00007191823,0.00009088818,0.000046460787,0.000020900077,0.00018540774,0.0000650038,0.0000063028933,0.00011938504],"genre_scores_gemma":[0.9984835,0.000029669081,0.00008667561,0.000019070685,0.0000059278323,0.000009529345,0.000015510206,0.0000033193762,0.0013468317],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99891835,0.000021192676,0.00025693857,0.00025363712,0.00039000864,0.00015983972],"domain_scores_gemma":[0.99952775,0.00003725185,0.000094341136,0.00025994427,0.000021484524,0.0000592464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003479428,0.00006761428,0.0002750224,0.0003458428,0.000033767876,0.0000020074785,0.00009196124,0.00003125248,0.00026877495],"category_scores_gemma":[0.00011659486,0.000057865404,0.00010730776,0.0016520068,0.00026017605,0.00005368249,0.0000502464,0.00003896358,0.000013550627],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039717703,0.000044080338,0.54660374,0.000016338237,0.000031959742,0.0000060077955,0.00007400761,0.0009703256,0.45188186,0.000019580484,0.000024736446,0.0002876579],"study_design_scores_gemma":[0.0001855386,0.000058025773,0.9798218,0.000027701964,0.00011553402,2.4070593e-7,0.000260835,0.0010364843,0.018394995,0.000033528362,0.00001819925,0.000047107053],"about_ca_topic_score_codex":0.0008167426,"about_ca_topic_score_gemma":0.00037195807,"teacher_disagreement_score":0.43348688,"about_ca_system_score_codex":0.0000824693,"about_ca_system_score_gemma":0.00007795605,"threshold_uncertainty_score":0.2942897},"labels":[],"label_agreement":null},{"id":"W4319296647","doi":"10.3390/jof9020212","title":"Non-Aspergillus Hyaline Molds: A Host-Based Perspective of Emerging Pathogenic Fungi Causing Sinopulmonary Diseases","year":2023,"lang":"en","type":"review","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Sick Kids Foundation","keywords":"Voriconazole; Biology; Scedosporium apiospermum; Context (archaeology); Paecilomyces; Microbiology; Immunology; Antifungal; Ecology","score_opus":0.04819529078752752,"score_gpt":0.3644480462891395,"score_spread":0.316252755501612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319296647","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001607844,0.99622446,0.00013712535,0.000101018704,0.00056598475,0.0006858275,0.00033884455,0.000035918627,0.0003029679],"genre_scores_gemma":[0.016871162,0.98093534,0.000397695,0.00006159724,0.0010049113,0.000009129216,0.000061967454,0.0001420954,0.0005161178],"study_design_codex":"design_other","study_design_gemma":"systematic_review","domain_scores_codex":[0.99548215,0.0002062535,0.0021617385,0.000516306,0.0011143845,0.000519186],"domain_scores_gemma":[0.99505985,0.00054859434,0.0021235251,0.00067218795,0.0011513295,0.00044449314],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00083501433,0.0006385462,0.003880834,0.00087642675,0.00011474138,0.000026010672,0.00028439504,0.00036650492,0.00017948073],"category_scores_gemma":[0.0006760138,0.00047222277,0.0029709032,0.0010916049,0.00016400867,0.00014881253,0.00009216323,0.0010185163,0.00003087039],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027441382,0.0025999313,0.0041345814,0.12099596,0.0056773117,0.02059563,0.00074237987,0.000040523206,0.0025933648,0.0001439903,0.0027599314,0.83697224],"study_design_scores_gemma":[0.009092977,0.008300672,0.029675968,0.51640254,0.07396109,0.0046925293,0.010366805,0.0008513415,0.00032784574,0.00044525613,0.3415275,0.0043554488],"about_ca_topic_score_codex":0.00004043653,"about_ca_topic_score_gemma":0.000013344562,"teacher_disagreement_score":0.8326168,"about_ca_system_score_codex":0.0008311068,"about_ca_system_score_gemma":0.0025657832,"threshold_uncertainty_score":0.99977297},"labels":[],"label_agreement":null},{"id":"W4319433905","doi":"10.4049/jimmunol.206.supp.16.20","title":"Nod2-deficient CD4+ T cells protect against <i>Candida albicans</i> infection","year":2021,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"NOD2; Biology; Candida albicans; Immunity; Immunology; Innate immune system; Immune system; Microbiology; Molecular biology","score_opus":0.011619006319781251,"score_gpt":0.25257405886512546,"score_spread":0.24095505254534422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319433905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99067646,0.0029585285,0.001218836,0.0018613839,0.0005174401,0.00014580952,0.000002122251,0.00001106769,0.0026083493],"genre_scores_gemma":[0.99563515,0.0022484409,0.00014992342,0.00080002117,0.00012546346,0.0000015007777,0.0000020512164,0.000010495335,0.0010269515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988021,0.0002690153,0.00041058636,0.000095751675,0.00021333103,0.00020918288],"domain_scores_gemma":[0.99882376,0.00012405048,0.0002634629,0.00031488537,0.00042618767,0.000047664013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075669575,0.000102611004,0.00032146223,0.00006342414,0.00011639498,0.000010045173,0.00010104395,0.00009762727,0.00022657972],"category_scores_gemma":[0.00024466548,0.00006231821,0.00015057693,0.00020769355,0.00017834282,0.00005396618,0.000044822038,0.00061440386,0.000043277105],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010779346,0.000266919,0.0047605364,0.00004102506,0.00021387315,0.00015283922,0.00043554482,0.0000644181,0.9845706,0.00005431687,0.0011930052,0.0071689403],"study_design_scores_gemma":[0.0042880382,0.0026968084,0.22922508,0.00044349607,0.00054155017,0.0033691307,0.0019355853,0.00006310024,0.6755199,0.00043693653,0.08119929,0.0002811151],"about_ca_topic_score_codex":0.000046613248,"about_ca_topic_score_gemma":0.000051621588,"teacher_disagreement_score":0.30905077,"about_ca_system_score_codex":0.00011695402,"about_ca_system_score_gemma":0.00036291822,"threshold_uncertainty_score":0.26693133},"labels":[],"label_agreement":null},{"id":"W4321372466","doi":"10.1186/s12879-023-08050-0","title":"Incidence, susceptibility and outcomes of candidemia in adults living in Calgary, Alberta, Canada (2010–2018)","year":2023,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary; Alberta Health Services; Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; European Society of Clinical Microbiology and Infectious Diseases","keywords":"Incidence (geometry); Fluconazole; Medical microbiology; Medicine; Population; Candida albicans; Candida glabrata; Mortality rate; Blood culture; Tropical medicine; Fungemia; Demography; Internal medicine; Mycosis; Biology; Antifungal; Environmental health; Microbiology; Surgery; Immunology; Antibiotics; Pathology","score_opus":0.00950138850073166,"score_gpt":0.2573875969470306,"score_spread":0.24788620844629897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321372466","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998482,0.00028046087,0.0000052233418,0.000059493923,0.0001541866,0.00044073604,0.000028500319,0.0000411118,0.00050832384],"genre_scores_gemma":[0.9991265,0.00011380628,0.00000994527,0.000118552285,0.000022840335,0.000032680917,0.000019107878,0.000014779579,0.00054180954],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983483,0.00011506432,0.00048302623,0.00040223342,0.00029210272,0.0003592648],"domain_scores_gemma":[0.99806243,0.00120597,0.000092471455,0.00036388077,0.00007328312,0.00020198022],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031057073,0.00018041294,0.0005320597,0.00020654907,0.00004926539,0.0000079209085,0.00006625909,0.00008790859,0.00009632097],"category_scores_gemma":[0.003946646,0.0001582305,0.00007936528,0.0005480678,0.00013709957,0.00009921437,0.00007966424,0.00017097873,0.0000057932252],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018491161,0.00016610297,0.99757075,0.0006502817,0.000013895681,0.00004442949,0.0002322369,0.000019123452,0.000022462724,0.000025382382,0.000555496,0.00051491836],"study_design_scores_gemma":[0.0009840147,0.00008310527,0.9974268,0.00044554324,0.000030558396,0.0000032971323,0.00034254816,0.000405718,0.000013519057,0.00010721162,0.000014248992,0.00014343979],"about_ca_topic_score_codex":0.92648816,"about_ca_topic_score_gemma":0.99799323,"teacher_disagreement_score":0.07150507,"about_ca_system_score_codex":0.00039632438,"about_ca_system_score_gemma":0.0013100195,"threshold_uncertainty_score":0.6452452},"labels":[],"label_agreement":null},{"id":"W4321437739","doi":"10.1139/cjm-2022-0195","title":"Adhesion and biofilm formation by the opportunistic pathogen <i>Candida tropicalis</i>: what do we know?","year":2023,"lang":"en","type":"review","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Biofilm; Candida tropicalis; Microbiology; Biology; Virulence; Yeast; Adhesion; Pathogen; Gene; Bacteria; Candida albicans; Genetics; Chemistry","score_opus":0.04740121965056019,"score_gpt":0.2993153964503095,"score_spread":0.2519141767997493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321437739","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029927882,0.99703354,0.000021873657,0.0012626984,0.00046136012,0.00037874366,0.0005117098,0.00000505357,0.00002575889],"genre_scores_gemma":[0.00025103358,0.9982753,0.000021388292,0.00029256078,0.00019425093,0.000004639732,0.00030492048,0.000028854076,0.0006270863],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99825615,0.00029010265,0.00082481175,0.00020605946,0.00006124231,0.00036161827],"domain_scores_gemma":[0.99829894,0.00023270083,0.000541175,0.0002647317,0.000148114,0.000514325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055083376,0.00025612715,0.0012141251,0.00024331882,0.00015569245,0.00007360561,0.00022093055,0.00041063767,0.00011709587],"category_scores_gemma":[0.00022162277,0.00014759845,0.0003345304,0.00018640744,0.0003083409,0.00010864172,0.000021757392,0.00061174046,0.00004336296],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024523217,0.000009321813,0.00005477522,0.0039027063,0.00015062532,0.00035750057,0.000116601004,1.1496588e-8,0.0007093338,0.000056735127,0.054984137,0.9396337],"study_design_scores_gemma":[0.00021387158,0.00022604439,0.000012325239,0.013508448,0.00062090094,0.0028240718,0.0003108603,2.6581756e-7,0.000006800849,0.000040557254,0.98210776,0.00012810384],"about_ca_topic_score_codex":0.00017738137,"about_ca_topic_score_gemma":0.0028157728,"teacher_disagreement_score":0.93950564,"about_ca_system_score_codex":0.00025336834,"about_ca_system_score_gemma":0.0021932279,"threshold_uncertainty_score":0.60188895},"labels":[],"label_agreement":null},{"id":"W4321446353","doi":"10.1128/mbio.03434-22","title":"Ent2 Governs Morphogenesis and Virulence in Part through Regulation of the Cdc42 Signaling Cascade in the Fungal Pathogen Candida albicans","year":2023,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; U.S. Department of Health and Human Services; Government of Canada; National Institutes of Health; Canadian Institutes of Health Research; Genome Canada; Canadian Institute for Advanced Research","keywords":"Candida albicans; Virulence; Fungal pathogen; Pathogen; Microbiology; Biology; Opportunistic pathogen; Organism; Yeast; CDC42; Human pathogen; Morphogenesis; Signal transduction; Cell biology; Genetics; Gene","score_opus":0.028053022150752747,"score_gpt":0.2737567484301117,"score_spread":0.24570372627935896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321446353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997818,0.00031638844,0.000014266998,0.00097520347,0.00005055307,0.0002994286,0.00004666703,0.000010056608,0.00046945913],"genre_scores_gemma":[0.99911,0.00016287182,0.000023234072,0.00024794537,0.000042522803,0.000014865206,0.000010195818,0.0000072710036,0.00038113762],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989637,0.00012010094,0.0002421757,0.00019891001,0.0002928085,0.00018228314],"domain_scores_gemma":[0.9994556,0.00014601031,0.00006414013,0.0002890447,0.000023089697,0.000022125017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056401285,0.0000849108,0.0001711863,0.000027861977,0.000056481596,0.000007838346,0.00010142963,0.00006533203,0.000047552392],"category_scores_gemma":[0.00015897717,0.00005107995,0.000053545034,0.00047713178,0.00010667845,0.000053868378,0.000038536997,0.00012885677,0.000004691235],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009381279,0.000043175896,0.84633535,0.000068753405,0.000008431745,0.000023477489,0.0029532877,0.000042231866,0.14926039,0.00017827173,0.00032193406,0.000670875],"study_design_scores_gemma":[0.0003643046,0.000034922585,0.9833407,0.00014646539,0.00002361927,0.000005518868,0.0017259967,0.00021475182,0.01306075,0.000269782,0.00075667526,0.000056545156],"about_ca_topic_score_codex":0.0015143681,"about_ca_topic_score_gemma":0.0042846994,"teacher_disagreement_score":0.1370053,"about_ca_system_score_codex":0.000060235358,"about_ca_system_score_gemma":0.000066286215,"threshold_uncertainty_score":0.23909627},"labels":[],"label_agreement":null},{"id":"W4322732084","doi":"10.1186/s12864-023-09174-y","title":"Amino acid substitutions in specific proteins correlate with farnesol unresponsiveness in Candida albicans","year":2023,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec; Université de Montréal; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Université Laval","keywords":"Farnesol; Biology; Candida albicans; Amino acid; Yeast; Corpus albicans; Biochemistry; Gene; Biofilm; Genetics; Microbiology; Bacteria","score_opus":0.03459521202587283,"score_gpt":0.2700165768580642,"score_spread":0.23542136483219134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322732084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964521,0.00020707038,0.0009238197,0.00020316207,0.0000886317,0.0009227731,0.000033524466,0.00005588083,0.0011130262],"genre_scores_gemma":[0.99681085,0.0001627767,0.0007494345,0.000051868847,0.00004263976,0.00008251832,0.00006954906,0.000023674404,0.0020066756],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99871504,0.00006857415,0.00030110386,0.00036347995,0.00017164738,0.0003801417],"domain_scores_gemma":[0.9993133,0.00007211131,0.000052772077,0.00040245816,0.00005546361,0.00010392567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033268097,0.00015647935,0.0003105341,0.0002577294,0.000067263296,0.00001581692,0.000103512,0.00010537596,0.00006114009],"category_scores_gemma":[0.00010463637,0.00013576823,0.000048945167,0.00088552776,0.00015888536,0.000056347228,0.000035623325,0.0002723712,0.00017132037],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024678342,0.0001817942,0.9582593,0.00013089637,0.000014898273,0.0005260545,0.001400665,0.0014467837,0.0338418,0.0008578989,0.00013896183,0.0007331337],"study_design_scores_gemma":[0.0017376081,0.000121124525,0.98898375,0.00012975812,0.0000147318815,0.000017324262,0.0014120268,0.0004489156,0.0016869301,0.000083588726,0.0051933327,0.0001709014],"about_ca_topic_score_codex":0.00046649168,"about_ca_topic_score_gemma":0.032146487,"teacher_disagreement_score":0.03215487,"about_ca_system_score_codex":0.00040704184,"about_ca_system_score_gemma":0.00072186766,"threshold_uncertainty_score":0.98551434},"labels":[],"label_agreement":null},{"id":"W4322773343","doi":"10.3389/fmicb.2023.1125241","title":"High prevalence of fluconazole resistant Candida tropicalis among candiduria samples in China: An ignored matter of concern","year":2023,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Natural Science Foundation of China","keywords":"Fluconazole; Candida tropicalis; Biology; Microbiology; Voriconazole; Antifungal","score_opus":0.011448984241175748,"score_gpt":0.25387004609443253,"score_spread":0.2424210618532568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322773343","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99806273,0.00054298475,0.00011858013,0.00015820433,0.00026930784,0.0003423255,0.00043949336,0.000016722537,0.000049645507],"genre_scores_gemma":[0.99811155,0.00021656328,0.0010266668,0.000053758416,0.000025567786,0.000013695939,0.00019420436,0.000014714336,0.0003432863],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984212,0.00019111327,0.0005919907,0.00037485972,0.0000697705,0.0003510493],"domain_scores_gemma":[0.9993048,0.000051771403,0.00015257685,0.00037990572,0.000051381656,0.000059612034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030864013,0.0001487326,0.0006924264,0.0002511588,0.000021016942,0.0000025215083,0.00018044331,0.00019507109,0.00020558892],"category_scores_gemma":[0.0001041352,0.00012890085,0.000076311975,0.00034540548,0.000620435,0.000052968644,0.00005158187,0.00019174942,0.0000043862606],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00089151214,0.00007539185,0.8071627,0.00042091668,0.000026891075,0.000025787189,0.00061310676,0.000009166043,0.1863017,0.000027708442,0.0043210443,0.00012407894],"study_design_scores_gemma":[0.0014230036,0.00023047511,0.9804269,0.00021684305,0.000029136447,0.000002565181,0.00080807984,0.00002770833,0.016276248,0.00031068447,0.00013937667,0.000108973014],"about_ca_topic_score_codex":0.0059617176,"about_ca_topic_score_gemma":0.00650576,"teacher_disagreement_score":0.1732642,"about_ca_system_score_codex":0.00012290983,"about_ca_system_score_gemma":0.00012400621,"threshold_uncertainty_score":0.90123737},"labels":[],"label_agreement":null},{"id":"W4323037511","doi":"10.1111/tid.14046","title":"Isavuconazole as an alternative for antifungal prophylaxis in patients with hematological malignancies: Is the signal sufficient to support clinical practice?","year":2023,"lang":"en","type":"editorial","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba; University of Manitoba","funders":"","keywords":"Medicine; Family medicine; Infectious disease (medical specialty); Library science; Gerontology; Internal medicine; Disease","score_opus":0.021529234589898274,"score_gpt":0.34361351250706057,"score_spread":0.3220842779171623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323037511","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86402357,0.00004162261,0.00053260487,0.00037523772,0.12279801,0.0051148655,0.006705622,0.00019212397,0.00021634261],"genre_scores_gemma":[0.94101477,0.00012609734,0.000053647153,0.000978572,0.05399758,0.0005802637,0.0028280881,0.00011558572,0.00030542302],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9948287,0.00033180273,0.0010728649,0.0013365849,0.0016493116,0.0007807394],"domain_scores_gemma":[0.9937369,0.003278915,0.00032986203,0.0007604591,0.0010706111,0.0008232214],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013843434,0.0005940499,0.00105989,0.00018493492,0.0002304356,0.000095439565,0.0003502293,0.0005721435,0.0001682862],"category_scores_gemma":[0.0027286282,0.0003709626,0.00040209776,0.00045269637,0.00030639398,0.0001887005,0.00004427495,0.0011906086,0.00016388002],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.06154525,0.010326007,0.5590348,0.0018876747,0.00057222927,0.0017846305,0.001754992,0.000037696474,0.000005974702,0.0001643773,0.36212343,0.00076287886],"study_design_scores_gemma":[0.029009774,0.07722096,0.5604868,0.003760818,0.0047381334,0.00003180025,0.000999137,0.00023203235,0.000113200185,0.0006327871,0.31978685,0.002987721],"about_ca_topic_score_codex":0.00022296254,"about_ca_topic_score_gemma":0.00033289436,"teacher_disagreement_score":0.07699117,"about_ca_system_score_codex":0.00022374453,"about_ca_system_score_gemma":0.0019471133,"threshold_uncertainty_score":0.99987423},"labels":[],"label_agreement":null},{"id":"W4323322406","doi":"10.1016/j.it.2023.02.004","title":"Virus-associated fungal infections and lost immune resistance","year":2023,"lang":"en","type":"review","venue":"Trends in Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Canadian Lung Association","keywords":"Immunology; Biology; Innate immune system; Immunity; Acquired immune system; Virus; Virology; Immune system","score_opus":0.06790056346865651,"score_gpt":0.3772658630828853,"score_spread":0.30936529961422876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323322406","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001241312,0.98930174,0.0000013572288,0.00008978607,0.00040934756,0.0003131022,0.00013166203,0.0001335071,0.00837816],"genre_scores_gemma":[0.0009933634,0.94554037,0.000017828132,0.000018515937,0.000058659924,0.00007710084,0.00036608538,0.00007361085,0.052854445],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972892,0.0003602246,0.0009940988,0.00063867983,0.0001623686,0.00055542274],"domain_scores_gemma":[0.9983318,0.00046874405,0.0003297497,0.0007344469,0.00006848507,0.00006680573],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00051411137,0.0004507318,0.002527216,0.00093591976,0.00011995748,0.000018307672,0.0001764657,0.0008677125,0.00042981334],"category_scores_gemma":[0.000565708,0.00039495653,0.00043662378,0.0016890656,0.0004181323,0.00005797957,0.00016432573,0.001342756,0.00039974108],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026821025,0.00077353755,0.0025025725,0.008441791,0.0016806477,0.0005668652,0.00020046975,6.060696e-8,0.00004214339,0.0012040555,0.003018444,0.9813012],"study_design_scores_gemma":[0.0010994172,0.0002991413,0.05200052,0.012089337,0.0009080601,0.0000770314,0.000054771233,6.760158e-7,0.0000021910676,0.00014926832,0.9328706,0.00044896212],"about_ca_topic_score_codex":0.00019090991,"about_ca_topic_score_gemma":0.0063757147,"teacher_disagreement_score":0.98085225,"about_ca_system_score_codex":0.00044491555,"about_ca_system_score_gemma":0.00025511827,"threshold_uncertainty_score":0.9998502},"labels":[],"label_agreement":null},{"id":"W4323656748","doi":"10.1073/pnas.2218163120","title":"Aneuploidy and gene dosage regulate filamentation and host colonization by <i>Candida albicans</i>","year":2023,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Sandia National Laboratories; National Institute of Allergy and Infectious Diseases; Canadian Institute for Advanced Research; Medical Research Council; National Institutes of Health; Agence Nationale de la Recherche","keywords":"Biology; Candida albicans; Aneuploidy; Filamentation; Gene; Corpus albicans; Genetics; Colonization; Adaptation (eye); Trisomy; Host adaptation; Gene dosage; Microbiology; Gene expression; Chromosome; Virulence","score_opus":0.025963138979270974,"score_gpt":0.3062805958461316,"score_spread":0.2803174568668606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323656748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946851,0.0001675077,7.8256323e-7,0.0042673573,0.00000631597,0.0001784639,0.000023778384,0.00001206428,0.0006586437],"genre_scores_gemma":[0.9986416,0.0002557273,0.00022381771,0.0003035287,0.000019890678,0.000004171773,0.0000011880804,0.000002660027,0.0005473807],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99898356,0.00000375709,0.00017620869,0.0001821761,0.0005654824,0.00008881276],"domain_scores_gemma":[0.99961174,0.000062282976,0.00015508177,0.000005411239,0.00013215534,0.000033327426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006776502,0.00005479742,0.000109953595,0.00007565164,0.00014408161,0.000014626669,0.00008872904,0.000047729933,0.0000075685616],"category_scores_gemma":[0.00026276693,0.000037602327,0.000018838771,0.0005974526,0.0006250493,0.00021539035,0.000047551708,0.00006343845,4.3027995e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034422777,0.000014182565,0.17496094,0.00009100502,0.000006627417,9.0568e-9,0.00016737526,0.0000013133123,0.8215251,0.0012698164,0.0017207584,0.00020845133],"study_design_scores_gemma":[0.00022574907,0.000061626146,0.7552542,0.00005574407,0.000014925079,0.000004422902,0.00019504949,0.00048669844,0.24124923,0.0023134202,0.000103101316,0.000035822926],"about_ca_topic_score_codex":0.000007468829,"about_ca_topic_score_gemma":1.7335017e-7,"teacher_disagreement_score":0.58029324,"about_ca_system_score_codex":0.00001766814,"about_ca_system_score_gemma":0.000019533305,"threshold_uncertainty_score":0.230302},"labels":[],"label_agreement":null},{"id":"W4324357321","doi":"10.3390/biomedicines11030898","title":"Identification and Elimination of Antifungal Tolerance in Candida auris","year":2023,"lang":"en","type":"article","venue":"Biomedicines","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Science Education Institute, Department of Science and Technology, Republic of the Philippines; Government of Canada; Alberta Precision Laboratories; University of Alberta; Government of Alberta","keywords":"Candida auris; Fluconazole; Echinocandin; Antifungal drug; Biology; Microbiology; Fungal pathogen; Antifungal drugs; Drug resistance; Antifungal; Multiple drug resistance; Cryptococcus neoformans; Pathogen","score_opus":0.016164048662051487,"score_gpt":0.3033972268044282,"score_spread":0.2872331781423767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4324357321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99736583,0.00050219207,0.00005872518,0.0014768827,0.0001321306,0.00018373033,0.00000777253,0.00003308542,0.00023967084],"genre_scores_gemma":[0.9983786,0.00043257303,0.000030496984,0.00004389347,0.00006928773,0.0000075951057,0.00003477214,0.0000057786297,0.000997043],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99922866,0.000017295355,0.00027050043,0.00017311244,0.00019608511,0.000114322924],"domain_scores_gemma":[0.99960846,0.000052988107,0.00006278802,0.00014880493,0.00008425332,0.000042729036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003616038,0.00006352795,0.0001920251,0.00025712742,0.000022642453,0.000003591928,0.000031081843,0.000050169005,0.000019480925],"category_scores_gemma":[0.00020292001,0.000051671534,0.00002145208,0.00066156336,0.00013978567,0.000055852932,0.000012513124,0.000048232476,0.000010018602],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012772383,0.000050480925,0.6629424,0.00038062426,0.0000076064775,0.00002042229,0.0005194728,6.785909e-7,0.32306072,0.00011732851,0.0016644106,0.011108138],"study_design_scores_gemma":[0.00060753315,0.00007863767,0.9878316,0.00018418102,0.000016791066,0.000004594409,0.0004937796,0.0007005925,0.009564006,0.00009559296,0.00037939352,0.000043287197],"about_ca_topic_score_codex":0.00011854999,"about_ca_topic_score_gemma":0.00007252733,"teacher_disagreement_score":0.3248892,"about_ca_system_score_codex":0.00002115717,"about_ca_system_score_gemma":0.000037383586,"threshold_uncertainty_score":0.21071039},"labels":[],"label_agreement":null},{"id":"W4324360815","doi":"10.3390/pathogens12030456","title":"Of Mycelium and Men: Inherent Human Susceptibility to Fungal Diseases","year":2023,"lang":"en","type":"review","venue":"Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé","keywords":"Mycelium; Biology; Microbiology; Botany","score_opus":0.09637882066994219,"score_gpt":0.3965652549847402,"score_spread":0.300186434314798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4324360815","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005781075,0.98970103,0.000009795818,0.000035122684,0.000111355635,0.001960955,0.0012273818,0.00010687476,0.0010663908],"genre_scores_gemma":[0.008616458,0.98849356,0.00007845704,0.000034549375,0.00022289019,0.00011884585,0.00027974581,0.00008210696,0.0020733778],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972933,0.00018403667,0.0008934307,0.0008049585,0.00043497648,0.0003892962],"domain_scores_gemma":[0.9980074,0.00019817651,0.00023124304,0.0009510952,0.00015477347,0.00045729984],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00045407642,0.0004372333,0.002342616,0.00019470301,0.000093400005,0.000016168846,0.00015932284,0.00024954343,0.0001829281],"category_scores_gemma":[0.0004674616,0.00033341718,0.00064547115,0.00043674695,0.0001720055,0.000027633016,0.0002234364,0.0003018193,0.00009668785],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018077552,0.0009123034,0.04829883,0.19871044,0.0007073761,0.00038685117,0.00034729208,1.547828e-7,0.0007574384,0.000581283,0.006628402,0.74248886],"study_design_scores_gemma":[0.00086945324,0.0013457808,0.10724186,0.027557096,0.0067318818,0.000047450594,0.00045818635,0.000002510403,0.000031450683,0.00021860238,0.8543364,0.0011593378],"about_ca_topic_score_codex":0.000031654352,"about_ca_topic_score_gemma":0.00014419232,"teacher_disagreement_score":0.847708,"about_ca_system_score_codex":0.00014755077,"about_ca_system_score_gemma":0.0002987619,"threshold_uncertainty_score":0.9999118},"labels":[],"label_agreement":null},{"id":"W4327612722","doi":"10.1093/ofid/ofad134","title":"Breakthrough Invasive Fungal Infection After Coadministration of Venetoclax and Voriconazole","year":2023,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Princess Margaret Cancer Centre; University Health Network","funders":"OPEC Fund for International Development","keywords":"Voriconazole; Medicine; Venetoclax; Pathogenic organism; Intensive care medicine; Microbiology; Internal medicine; Antifungal; Leukemia; Dermatology; Biology","score_opus":0.016302365625467562,"score_gpt":0.30959761764984145,"score_spread":0.2932952520243739,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4327612722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928029,0.00020421694,0.000029547598,0.00019727329,0.00012818207,0.00068024057,0.00008347738,0.000089277666,0.0057848645],"genre_scores_gemma":[0.9984145,0.0003367838,0.000009670847,0.00025256403,0.000048522794,0.000117980504,0.00010418741,0.000017079035,0.00069867936],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99903804,0.000043739863,0.00024623517,0.00027962806,0.00017970912,0.00021266783],"domain_scores_gemma":[0.9992974,0.00009858171,0.00009665375,0.00024097855,0.00012805733,0.00013836242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001103688,0.00013500245,0.00028360588,0.000087192355,0.00012422039,0.000060197362,0.000051459538,0.000075675736,0.00017789997],"category_scores_gemma":[0.00023440787,0.00012393318,0.00009122386,0.00033453328,0.0001321443,0.0003256591,0.000128016,0.00008323492,0.00006195086],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005073258,0.00015066529,0.9935475,0.00020323234,0.00005753005,0.000034227065,0.00006858691,0.0000068108893,0.0006462771,0.00060339214,0.0017858158,0.002388613],"study_design_scores_gemma":[0.000969239,0.0006296028,0.99394506,0.00011262179,0.00012837962,0.000025203024,0.00015022668,0.00004268155,0.001453639,0.0017319323,0.0006887877,0.00012263234],"about_ca_topic_score_codex":0.00069279206,"about_ca_topic_score_gemma":0.0014887081,"teacher_disagreement_score":0.0056116125,"about_ca_system_score_codex":0.00009455042,"about_ca_system_score_gemma":0.0003492697,"threshold_uncertainty_score":0.5053848},"labels":[],"label_agreement":null},{"id":"W4327681319","doi":"10.1111/tid.14049","title":"Invasive aspergillosis in liver transplant recipients","year":2023,"lang":"en","type":"review","venue":"Transplant Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Medicine; Voriconazole; Liver transplantation; Aspergillosis; Intensive care medicine; Tacrolimus; Transplantation; Incidence (geometry); Posaconazole; Liver disease; Surgery; Internal medicine; Antifungal; Immunology; Dermatology","score_opus":0.0659958774755961,"score_gpt":0.3304266840128624,"score_spread":0.2644308065372663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4327681319","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009690824,0.9836341,0.000018654888,0.00002169921,0.0004133378,0.0023881483,0.002051028,0.00036568337,0.0014165197],"genre_scores_gemma":[0.05547754,0.9413651,0.000004731591,0.00010060161,0.00015447756,0.0003462826,0.0016086117,0.00013938102,0.00080324354],"study_design_codex":"observational","study_design_gemma":"systematic_review","domain_scores_codex":[0.9964051,0.00026825906,0.001043326,0.0010134896,0.0005622861,0.0007075078],"domain_scores_gemma":[0.9978435,0.00047818318,0.00018065487,0.00071358663,0.00007027955,0.0007137697],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003300628,0.0007647693,0.0023403827,0.0006466562,0.00011363512,0.000031578988,0.00022648532,0.0004609223,0.00033151396],"category_scores_gemma":[0.0001219621,0.0006231218,0.0013204619,0.0009309911,0.00013330164,0.00010724112,0.000020322184,0.00086447987,0.0011525536],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001973691,0.003270237,0.37117773,0.30609313,0.0019650152,0.034295082,0.0010663879,0.0000069906578,0.0000048283937,0.00032117963,0.0008666288,0.2789591],"study_design_scores_gemma":[0.0065026036,0.000939631,0.250978,0.44482458,0.030006679,0.00069342175,0.00004265514,0.000049705908,0.000007231384,0.000308779,0.26176018,0.0038865441],"about_ca_topic_score_codex":0.00026515356,"about_ca_topic_score_gemma":0.0016575771,"teacher_disagreement_score":0.27507254,"about_ca_system_score_codex":0.00044259342,"about_ca_system_score_gemma":0.0010928008,"threshold_uncertainty_score":0.99962515},"labels":[],"label_agreement":null},{"id":"W4328120219","doi":"10.12659/ajcr.938659","title":"Classical Presentation of Disseminated Blastomycosis in a 44-Year-Old Healthy Man 3 Months After Diagnosis of COVID-19","year":2023,"lang":"en","type":"article","venue":"American Journal of Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Blastomycosis; Differential diagnosis; Fluconazole; Infectious disease (medical specialty); Pneumonia; Blastomyces; Blastomyces dermatitidis; Dermatology; Pediatrics; Intensive care medicine; Disease; Internal medicine; Pathology; Antifungal","score_opus":0.017614698374635963,"score_gpt":0.3487943530821319,"score_spread":0.33117965470749594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4328120219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975512,0.00019759618,0.000066825574,0.001787348,0.00006817872,0.00023044167,0.0000117941645,0.000010774009,0.000075832206],"genre_scores_gemma":[0.99900854,0.0003878144,0.00025774952,0.00016926399,0.000041517247,0.000017630886,0.000005329678,0.000015798541,0.000096354015],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99763966,0.00015075925,0.0012353988,0.0002002596,0.0005578146,0.00021612247],"domain_scores_gemma":[0.99746484,0.00043327882,0.0012048604,0.00028814233,0.00025196618,0.00035689693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009170334,0.00012027881,0.0007066326,0.0003698306,0.000021938586,0.000004834962,0.000035303812,0.000050540275,0.00008624883],"category_scores_gemma":[0.0015163588,0.00009875041,0.00022650798,0.0009361252,0.00031890112,0.00009434738,0.000026297552,0.00022712948,0.000001045256],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023280948,0.00035197177,0.9046457,0.0002714906,0.00007515837,0.08435722,0.0009814773,0.000034104418,0.00087999227,0.0000033317694,0.0017498417,0.0043216594],"study_design_scores_gemma":[0.0010033279,0.0024707685,0.9714944,0.0005111886,0.00021541576,0.0131998295,0.00692492,0.00008224252,0.0032329927,0.00007426981,0.0006589482,0.00013171374],"about_ca_topic_score_codex":0.0007807332,"about_ca_topic_score_gemma":0.00031163744,"teacher_disagreement_score":0.07115738,"about_ca_system_score_codex":0.00016729544,"about_ca_system_score_gemma":0.000489971,"threshold_uncertainty_score":0.40269247},"labels":[],"label_agreement":null},{"id":"W4361216064","doi":"10.3138/jammi-2022-0021","title":"Epidemiology and associated risk factors for candidemia in a Canadian tertiary paediatric hospital: An 11-year review","year":2023,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"B.C. Women's Hospital & Health Centre; University of British Columbia","funders":"BC Children's Hospital","keywords":"Medicine; Candida parapsilosis; Case fatality rate; Epidemiology; Incidence (geometry); Candida tropicalis; Candida glabrata; Pediatrics; Immunosuppression; Internal medicine; Fungemia; Mortality rate; Mycosis; Surgery; Antifungal; Dermatology","score_opus":0.007689552638208854,"score_gpt":0.2681477629709569,"score_spread":0.260458210332748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361216064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9798033,0.0038773364,0.000001556401,0.0154581955,0.00035112278,0.00026267732,0.00023622515,0.00000416031,0.000005410529],"genre_scores_gemma":[0.9888384,0.008319104,0.0000022871654,0.0026806134,0.000061848186,0.0000036902773,0.00004424509,0.0000061395795,0.000043682612],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99827784,0.0005813868,0.0005707527,0.00013028207,0.00014259915,0.00029711454],"domain_scores_gemma":[0.9971113,0.0013970236,0.00065302657,0.00009435295,0.00019470758,0.0005495667],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0037217343,0.00009489175,0.00052194454,0.000103433566,0.0000978865,0.0000017430813,0.00009260961,0.00021965415,0.000022256698],"category_scores_gemma":[0.038397834,0.00006250396,0.00011503097,0.0002246083,0.0000709839,0.000039289007,0.000023128687,0.0003527236,1.2715931e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025184905,0.000033476368,0.9725281,0.00016002708,0.00008997728,0.000009314695,0.000029895937,0.0000014871176,0.000011139159,0.000026044667,0.026944295,0.00014104684],"study_design_scores_gemma":[0.00089916115,0.00012439393,0.99531907,0.0003346894,0.00023086033,0.0000057643992,0.000053161184,0.000037221722,0.000002988518,0.00020093082,0.0027325922,0.00005915],"about_ca_topic_score_codex":0.58143085,"about_ca_topic_score_gemma":0.9637501,"teacher_disagreement_score":0.38231933,"about_ca_system_score_codex":0.00075276004,"about_ca_system_score_gemma":0.0032559098,"threshold_uncertainty_score":0.9697021},"labels":[],"label_agreement":null},{"id":"W4361216473","doi":"10.3138/jammi-2022-0027","title":"Real-life comparison of posaconazole versus fluconazole for primary antifungal prophylaxis during remission-induction chemotherapy for acute leukemia","year":2023,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Centre intégré universitaire de santé et de services sociaux de l'Est-de-l'Île-de-Montréal; Université de Montréal; Centre Intégré Universitaire de Santé et de Services Sociaux du Centre-Sud-de-l'Île-de-Montréal; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Posaconazole; Fluconazole; Medicine; Incidence (geometry); Internal medicine; Aspergillosis; Leukemia; Induction chemotherapy; Chemotherapy; Acute leukemia; Antifungal; Immunology; Voriconazole; Dermatology","score_opus":0.009447173623333067,"score_gpt":0.28873453695912493,"score_spread":0.27928736333579185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361216473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947659,0.00017963817,0.000036016798,0.0037312694,0.00081280386,0.0003109721,0.00013363946,0.0000068363697,0.000022955168],"genre_scores_gemma":[0.99899614,0.00032857023,0.000018777291,0.00020300571,0.00017956851,0.0000051990646,0.000036526184,0.000008431733,0.00022378686],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988111,0.000078762125,0.0005466894,0.00011645972,0.00027830058,0.00016867318],"domain_scores_gemma":[0.9981496,0.0003814113,0.00075238704,0.000103735496,0.00041938364,0.00019349232],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007099981,0.000091163965,0.0004524629,0.000058087004,0.00013188743,0.0000034028822,0.00009947125,0.00018858109,0.000019741643],"category_scores_gemma":[0.0021152252,0.00006379583,0.00019114748,0.00013639125,0.00008286952,0.000041413503,0.000025451229,0.00022644989,9.797189e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008172428,0.00019934383,0.605159,0.0007912155,0.0011978507,0.0000050483764,0.00011227777,0.000025780357,0.34243965,0.00006712938,0.040177617,0.0016526543],"study_design_scores_gemma":[0.008037954,0.00066435937,0.962603,0.00023413711,0.00046264532,0.0000126038,0.00017275958,0.00012263811,0.025489712,0.00007167456,0.002029216,0.00009933219],"about_ca_topic_score_codex":0.0012364277,"about_ca_topic_score_gemma":0.0028019461,"teacher_disagreement_score":0.35744396,"about_ca_system_score_codex":0.000674744,"about_ca_system_score_gemma":0.0031790182,"threshold_uncertainty_score":0.56394416},"labels":[],"label_agreement":null},{"id":"W4361278648","doi":"10.1016/j.smim.2023.101757","title":"Immunoglobulins at the interface of the gut mycobiota and anti-fungal immunity","year":2023,"lang":"en","type":"review","venue":"Seminars in Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institutes of Health; Leona M. and Harry B. Helmsley Charitable Trust; Burroughs Wellcome Fund; Research Corporation for Science Advancement; Cancer Research Institute; Canadian Institute for Advanced Research","keywords":"Mycobiota; Microbiology; Antibody; Biology; Immunity; Immunology; Humoral immunity; Immunoglobulin A; Immunoglobulin G; Immune system; Ecology","score_opus":0.03600629717469775,"score_gpt":0.3664071260037059,"score_spread":0.3304008288290081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361278648","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08932033,0.90808237,7.2849565e-7,0.0001915571,0.00067712204,0.0010590372,0.00008202542,0.000028980434,0.00055784],"genre_scores_gemma":[0.013366349,0.9797662,0.000015288138,0.00003317556,0.000037699378,0.000041238847,0.000035343797,0.00005580324,0.006648918],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99706185,0.0007270822,0.0010251985,0.0004905823,0.00022562689,0.00046967453],"domain_scores_gemma":[0.9964981,0.0010089877,0.00050369307,0.0018713163,0.00008420786,0.000033694447],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010847735,0.00044217127,0.0020725506,0.0001540592,0.00021418778,0.000011954205,0.0007881448,0.00067602884,0.0000999271],"category_scores_gemma":[0.0009355324,0.00023781545,0.0005295235,0.0007607582,0.0017139226,0.00003263198,0.0015180066,0.001681521,0.00008520746],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000766885,0.0006055068,0.018929442,0.032320272,0.0025931927,0.00018555156,0.002381227,0.0000010835458,0.0047964468,0.00045327604,0.0050010104,0.9319661],"study_design_scores_gemma":[0.00086323207,0.00035549482,0.048453014,0.04779523,0.0012499361,0.00082968373,0.0013253477,0.000002283073,0.00030483076,0.00011289796,0.89822865,0.00047939917],"about_ca_topic_score_codex":0.00025324774,"about_ca_topic_score_gemma":0.00028779788,"teacher_disagreement_score":0.9314867,"about_ca_system_score_codex":0.00034830888,"about_ca_system_score_gemma":0.0004182238,"threshold_uncertainty_score":0.96978325},"labels":[],"label_agreement":null},{"id":"W4361764941","doi":"10.1177/2050313x231160949","title":"Cutaneous candidiasis mimicking acute generalized exanthematous pustulosis: A case report","year":2023,"lang":"en","type":"article","venue":"SAGE Open Medical Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Electricity Association; Ottawa Hospital; University of Ottawa","funders":"","keywords":"Medicine; Dermatology; Acute generalized exanthematous pustulosis; Erythema; Candida albicans; Itraconazole; Differential diagnosis; Chronic mucocutaneous candidiasis; Antifungal; Pathology; Disease","score_opus":0.03407967781127568,"score_gpt":0.36089811919313414,"score_spread":0.32681844138185845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361764941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900104,0.00051676785,0.00017219756,0.0016331236,0.0006102847,0.0014704599,0.00002677663,0.00032991113,0.005230089],"genre_scores_gemma":[0.98926413,0.00043202876,0.00055719574,0.000922158,0.0003088089,0.00016916549,0.00014838572,0.00008293225,0.008115182],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9947222,0.00018184367,0.001608641,0.0010761656,0.0015510177,0.0008601444],"domain_scores_gemma":[0.9959858,0.0002772975,0.000492557,0.0017024978,0.00021754306,0.0013243052],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0031942476,0.00040518405,0.001164292,0.00018952682,0.0004908587,0.00017744854,0.0001708781,0.00040777505,0.003257288],"category_scores_gemma":[0.0043620467,0.00032476665,0.00036050615,0.0008916296,0.00026929128,0.0002319599,0.0005611299,0.0006260551,0.00009305981],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021756269,0.00018858483,0.009915933,0.00017143681,0.00034727485,0.9670957,0.0005434999,8.219384e-7,0.00037376722,0.0000072946154,0.009242681,0.011895497],"study_design_scores_gemma":[0.0008727238,0.00012945721,0.00035731107,0.00049801875,0.00059805426,0.98984176,0.0018028608,0.00023428642,0.00091569603,0.00014960718,0.0042473627,0.0003528841],"about_ca_topic_score_codex":0.0051611564,"about_ca_topic_score_gemma":0.0026529615,"teacher_disagreement_score":0.022746092,"about_ca_system_score_codex":0.00021822687,"about_ca_system_score_gemma":0.001328948,"threshold_uncertainty_score":0.9999204},"labels":[],"label_agreement":null},{"id":"W4362577613","doi":"10.21203/rs.3.rs-2706400/v1","title":"Genotypic diversity and unrecognized antifungal resistance among populations of Candida glabrata from positive blood cultures","year":2023,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Center for Research Computing, University of Pittsburgh; York University; University of Pittsburgh","keywords":"Candida glabrata; Antifungal; Genotype; Microbiology; Biology; Resistance (ecology); Diversity (politics); Genetic diversity; Genetics; Medicine; Ecology; Gene; Population; Sociology; Environmental health","score_opus":0.1132675520840128,"score_gpt":0.39859430968860765,"score_spread":0.28532675760459486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362577613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905392,0.0031186247,0.000060754766,0.00041510785,0.00015301294,0.0014697686,0.0033615225,0.00009013313,0.00079187774],"genre_scores_gemma":[0.99201196,0.0011198502,0.0007968226,0.000015054682,0.00018562954,0.000032388627,0.0015222338,0.000041459014,0.0042746067],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9960805,0.0004081652,0.00048621232,0.0010442929,0.0014195258,0.0005613075],"domain_scores_gemma":[0.9966179,0.0005901871,0.00019162375,0.00097458967,0.0012886066,0.00033710236],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011215984,0.00030905032,0.00082037615,0.00033570558,0.00096860505,0.000065169916,0.00033784343,0.0005067753,0.00016131482],"category_scores_gemma":[0.0016593881,0.0002778819,0.00023637491,0.000536505,0.0007541515,0.00010933717,0.0031282543,0.0016020805,0.00001594477],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011997155,0.00022140678,0.9892367,0.0014702815,0.0003863469,0.00021421572,0.0021440194,0.0000033691463,0.0025166825,0.00026089666,0.0022382291,0.0001081352],"study_design_scores_gemma":[0.0011335309,0.0001276316,0.98758173,0.0024907608,0.00030855206,8.563607e-7,0.0013375293,0.000041847426,0.0021493428,0.004575171,0.000024388848,0.00022863272],"about_ca_topic_score_codex":0.01895624,"about_ca_topic_score_gemma":0.022835141,"teacher_disagreement_score":0.0043142745,"about_ca_system_score_codex":0.00019088594,"about_ca_system_score_gemma":0.00042130784,"threshold_uncertainty_score":0.99996734},"labels":[],"label_agreement":null},{"id":"W4362578526","doi":"10.4102/sajid.v38i1.470","title":"Prescribing patterns of echinocandins in adult patients in a private hospital in Gauteng, South Africa","year":2023,"lang":"en","type":"article","venue":"Southern African Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences North","funders":"","keywords":"Anidulafungin; Caspofungin; Echinocandins; Medicine; Micafungin; Observational study; Antifungal; Internal medicine; Antifungal drug; Intensive care medicine; Fluconazole; Dermatology","score_opus":0.00897522133678534,"score_gpt":0.23275258823285802,"score_spread":0.2237773668960727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362578526","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990215,0.00010859421,0.000027476532,0.000047457193,0.00010389278,0.00032014563,0.00017106751,0.000023661902,0.00017624644],"genre_scores_gemma":[0.99978095,0.00006428985,0.000009125029,0.00001938696,0.00004783126,0.000007856505,0.0000083537025,0.000026396037,0.00003582266],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99797803,0.0001436598,0.00084686244,0.00021796038,0.00044162697,0.00037187932],"domain_scores_gemma":[0.9988777,0.00010445828,0.00042853158,0.000205695,0.0002036166,0.00017996586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003190001,0.00018198816,0.00057127286,0.0007839104,0.000025410933,0.000014303232,0.00013602854,0.000069912414,0.000033301225],"category_scores_gemma":[0.0010524951,0.00014954113,0.00022024277,0.00087676046,0.00007392225,0.00011812773,0.0000495331,0.00035490395,0.00000990859],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000503534,0.0010828578,0.9807379,0.00015679088,0.000037987145,0.00022011703,0.016417969,0.000079579266,0.00008329728,0.000014038519,0.000015034239,0.00065088255],"study_design_scores_gemma":[0.003777545,0.00077471515,0.9824797,0.0009485976,0.000045833367,0.0000021146943,0.011436014,0.000057641064,0.000038562895,0.00029922993,0.0000050490376,0.00013501171],"about_ca_topic_score_codex":0.00025553314,"about_ca_topic_score_gemma":0.0006562882,"teacher_disagreement_score":0.0049819537,"about_ca_system_score_codex":0.00022632394,"about_ca_system_score_gemma":0.00018500687,"threshold_uncertainty_score":0.60981107},"labels":[],"label_agreement":null},{"id":"W4362579883","doi":"10.1016/j.micres.2023.127373","title":"Key essential oil components delocalize Candida albicans Kar3p and impact microtubule structure","year":2023,"lang":"en","type":"article","venue":"Microbiological Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Queen's University; University Grants Commission; University of Regina; Indian Council of Agricultural Research; ICAR - National Agricultural Science Fund; Brown University","keywords":"Biology; Candida albicans; Key (lock); Microtubule; Microbiology; Cell biology; Ecology","score_opus":0.07849843558857471,"score_gpt":0.40929687540155374,"score_spread":0.330798439812979,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362579883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99681073,0.0005478847,0.000012981281,0.0012231547,0.000057465862,0.0002624219,0.00027134118,0.000095300966,0.0007187137],"genre_scores_gemma":[0.99405897,0.00053360895,0.000116605836,0.0001551929,0.00012122653,0.000011201267,0.00041221804,0.000019443736,0.004571562],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99737704,0.00033762597,0.00029025698,0.000645292,0.00037049653,0.0009792924],"domain_scores_gemma":[0.99852914,0.00039508863,0.00003211401,0.00039140641,0.00026446825,0.00038781384],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009792211,0.00021608792,0.00045236587,0.00019218188,0.00033501253,0.00006709759,0.00021951343,0.0003117621,0.0016102192],"category_scores_gemma":[0.0006659977,0.00013696718,0.00014619328,0.00073436135,0.00090900896,0.00004376011,0.00033511707,0.00085353776,0.00025580352],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008415757,0.000089788366,0.08071658,0.00011321655,0.00006131082,0.00016831826,0.00012097628,0.000001738407,0.90277797,0.000042026444,0.012485956,0.0025805524],"study_design_scores_gemma":[0.0025261724,0.0010562899,0.9311242,0.0002111235,0.000039491722,0.00015129817,0.00045258572,0.00022308745,0.036823977,0.0005955053,0.026401471,0.00039480068],"about_ca_topic_score_codex":0.0006790719,"about_ca_topic_score_gemma":0.00026404214,"teacher_disagreement_score":0.865954,"about_ca_system_score_codex":0.00017480426,"about_ca_system_score_gemma":0.00019508449,"threshold_uncertainty_score":0.99930245},"labels":[],"label_agreement":null},{"id":"W4362661733","doi":"10.1101/2023.04.05.535776","title":"Mrs4 loss of function in fungi during adaptation to the cystic fibrosis lung","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Environmental Health Sciences; National Institute of Allergy and Infectious Diseases; Thayer School of Engineering, Dartmouth College; Dartmouth College; National Institute of General Medical Sciences; Canadian Institute for Advanced Research; National Cancer Institute; National Science Foundation; National Institutes of Health; Cystic Fibrosis Foundation","keywords":"Cystic fibrosis; Lung function; Adaptation (eye); Lung; Function (biology); Microbiology; Biology; Medicine; Evolutionary biology; Internal medicine; Neuroscience","score_opus":0.018947337720556966,"score_gpt":0.24384569990896804,"score_spread":0.22489836218841108,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362661733","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913531,0.0008912615,0.004981489,0.00042004595,0.0007916993,0.0012378182,0.00012369,0.0001962487,0.0000046526484],"genre_scores_gemma":[0.9978911,0.00018855427,0.001205095,0.000084692256,0.00031624656,0.00018508869,9.489775e-7,0.00009087169,0.000037357695],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9973814,0.00013310346,0.0007038174,0.0007983215,0.00054624106,0.00043713613],"domain_scores_gemma":[0.9977209,0.0001409314,0.0002853218,0.0012302976,0.0004443284,0.00017824912],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009042913,0.00035657565,0.00061241694,0.0003632276,0.000105504325,0.000048160528,0.0002626966,0.00035654948,0.00003555358],"category_scores_gemma":[0.0006868417,0.00031086465,0.00018889093,0.000980253,0.00008064417,0.00008897834,0.0002697797,0.0006683085,0.00008779502],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011783448,0.00018364478,0.3630729,0.003475451,0.00018932768,0.000085988606,0.00012463209,0.0023548445,0.6289159,0.00013786898,0.00027457875,0.0000064756405],"study_design_scores_gemma":[0.00049765606,0.000081281076,0.96285087,0.0015566291,0.0001911785,1.0633429e-8,0.00003767078,0.0013837916,0.033002082,0.0000020145078,0.00012202387,0.00027478134],"about_ca_topic_score_codex":0.00023609848,"about_ca_topic_score_gemma":0.00010217506,"teacher_disagreement_score":0.59977794,"about_ca_system_score_codex":0.00045195542,"about_ca_system_score_gemma":0.00047197772,"threshold_uncertainty_score":0.9999343},"labels":[],"label_agreement":null},{"id":"W4362690265","doi":"10.1007/978-1-0716-3155-3_10","title":"Chemical-Genetic Approaches for Exploring Mode of Action of Antifungal Compounds in the Fungal Pathogen Candida albicans","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canadian Institute for Advanced Research","keywords":"Candida albicans; Biology; Mode of action; Phenotypic screening; Genetic screen; Fungal pathogen; Corpus albicans; Antifungal drug; Computational biology; Drug discovery; Microbiology; Antifungal; Pathogen; Mutant; Genetics; Phenotype; Gene; Bioinformatics; Biochemistry","score_opus":0.18800667200717597,"score_gpt":0.4380583241484465,"score_spread":0.2500516521412705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362690265","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82082,0.00018668456,0.17822869,0.000098828816,0.000060017246,0.00039306044,0.00002449,0.000009621682,0.00017865363],"genre_scores_gemma":[0.8514837,0.000050216076,0.14822774,0.000030903728,0.000021286849,0.00012136783,0.000042693795,0.000011598808,0.000010516174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837273,0.000580891,0.00041191856,0.00028296906,0.00010033925,0.00025113657],"domain_scores_gemma":[0.9990288,0.00047641702,0.00009266861,0.0003324365,0.000042483374,0.000027200138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014372809,0.00011431545,0.00043504193,0.00016456649,0.00001714195,0.0000019988343,0.00014900453,0.00013589942,0.000004440047],"category_scores_gemma":[0.00057587976,0.000085757456,0.00013253832,0.00047759272,0.00018547442,0.0000151771965,0.000041445,0.00017383396,3.206948e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025193993,0.00008606554,0.07832887,0.00019225021,0.000025213383,0.000010903396,0.00048586578,0.00007494658,0.90928954,0.0006782825,0.000005562519,0.010570536],"study_design_scores_gemma":[0.001093239,0.00028692748,0.09113155,0.00007085008,0.00006397583,0.000012593295,0.0017023076,0.004157826,0.89629376,0.004926086,0.00012399076,0.00013689332],"about_ca_topic_score_codex":0.00014644985,"about_ca_topic_score_gemma":0.00006654875,"teacher_disagreement_score":0.030663732,"about_ca_system_score_codex":0.000038376274,"about_ca_system_score_gemma":0.000066552275,"threshold_uncertainty_score":0.34970877},"labels":[],"label_agreement":null},{"id":"W4362724386","doi":"10.5281/zenodo.7810125","title":"Post-COVID-19 Fungal Diseases and Emerging Antifungal Resistance","year":2023,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"ASTER","funders":"","keywords":"Antifungal; Coronavirus disease 2019 (COVID-19); Resistance (ecology); 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Biology; Microbiology; Virology; Medicine; Ecology; Infectious disease (medical specialty); Internal medicine; Disease","score_opus":0.03551450760080715,"score_gpt":0.2964006561958919,"score_spread":0.26088614859508474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362724386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93665653,0.0008779359,0.00089395075,0.009350268,0.00014828065,0.0008701111,0.00086639076,0.0027663999,0.047570147],"genre_scores_gemma":[0.99010885,0.0003433437,0.000084079686,0.00070921384,0.00014885834,5.994266e-8,0.0011549335,0.00062206516,0.0068285977],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99813324,0.0002025646,0.0002473495,0.0005355525,0.00045265316,0.00042861135],"domain_scores_gemma":[0.9984716,0.000060637125,0.00006670367,0.00046629508,0.00040053058,0.0005342273],"candidate_categories":["sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00063020585,0.00015153333,0.00021381232,0.0002609129,0.0020301891,0.00028569158,0.00029596145,0.000061627616,0.0048281797],"category_scores_gemma":[0.0029669143,0.000149426,0.00007271754,0.00076837785,0.000274194,0.0001964664,0.00053744594,0.00023609007,0.002559951],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029698168,0.00047210077,0.01088136,0.002374994,0.00022514378,0.00104919,0.003847856,0.00002159959,0.06233053,0.009661681,0.8458415,0.0603242],"study_design_scores_gemma":[0.00089896336,0.00020108809,0.14460267,0.00006464436,0.000047415277,0.00008361674,0.001220891,0.00012761333,0.00018866014,0.00024759283,0.85212094,0.00019587729],"about_ca_topic_score_codex":0.000012448803,"about_ca_topic_score_gemma":0.0000018288748,"teacher_disagreement_score":0.13372132,"about_ca_system_score_codex":0.00014888187,"about_ca_system_score_gemma":0.000019603594,"threshold_uncertainty_score":0.999269},"labels":[],"label_agreement":null},{"id":"W4364352746","doi":"10.1128/msphere.00095-23","title":"Construction of Candida albicans Strains with ATP-Analog-Sensitive Protein Kinase A and Hog1","year":2023,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Government of Canada; Canadian Institute for Advanced Research","keywords":"Candida albicans; Virulence; Microbiology; Yeast; Osmotic shock; Biology; Pathogen; Corpus albicans; Fungus; Fungal pathogen; Genetics; Gene; Botany","score_opus":0.01274080281792251,"score_gpt":0.2500727653035436,"score_spread":0.2373319624856211,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4364352746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935043,0.000041965803,0.000105506755,0.0004511357,0.000013588626,0.00036358708,0.000041690895,0.00004556055,0.0054326896],"genre_scores_gemma":[0.99780273,0.000026799233,0.00068563345,0.000043302636,0.000026680269,0.000009156668,0.000015091555,0.000010439303,0.0013801836],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99932855,0.000019189378,0.00013025751,0.00020033952,0.00016977849,0.00015185964],"domain_scores_gemma":[0.99957776,0.000021776965,0.000052883606,0.00016369035,0.00009972656,0.00008416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000095886404,0.000090254885,0.00022579878,0.000026530137,0.000047213118,0.0000057351263,0.000019531994,0.00005386377,0.0001282202],"category_scores_gemma":[0.000057568235,0.00006711977,0.000034955774,0.00024222987,0.00029459837,0.000036405378,0.000012876889,0.000104146995,0.000008646836],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024231644,0.0002096674,0.619323,0.0012665316,0.00045383952,0.0010051768,0.0035015969,0.000009462584,0.28514442,0.0027668304,0.0010126962,0.08288363],"study_design_scores_gemma":[0.001915641,0.0009455566,0.9617038,0.00052347995,0.00015053558,0.00006439603,0.01203182,0.00015031073,0.021114059,0.00018904044,0.0010213485,0.00019005832],"about_ca_topic_score_codex":0.00044099073,"about_ca_topic_score_gemma":0.0021785046,"teacher_disagreement_score":0.34238076,"about_ca_system_score_codex":0.000027933798,"about_ca_system_score_gemma":0.00013061681,"threshold_uncertainty_score":0.2737065},"labels":[],"label_agreement":null},{"id":"W4365135538","doi":"10.1099/mgen.0.000979","title":"Comparing genomic variant identification protocols for Candida auris","year":2023,"lang":"en","type":"article","venue":"Microbial Genomics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Commissariat Général à l'Investissement; Centers for Disease Control and Prevention; Agence Nationale de la Recherche; National Institute of Allergy and Infectious Diseases; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; Broad Institute; Wellcome Trust; Medical Research Council; Canadian Institute for Advanced Research; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Biology; Single-nucleotide polymorphism; Phylogenetic tree; Clade; Computational biology; Genetics; Concordance; Genome-wide association study; SNP; Population; Gene; Medicine; Genotype","score_opus":0.0570976395604316,"score_gpt":0.3247589607406333,"score_spread":0.2676613211802017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4365135538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.984131,0.000021907528,0.0037721859,0.00041352617,0.00018616808,0.010964194,0.000086759435,0.00013508397,0.00028919894],"genre_scores_gemma":[0.9923751,0.000018273067,0.0015950719,0.00016995099,0.0003357525,0.0015598214,0.00029623392,0.00004217964,0.0036076212],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99877995,0.00002125566,0.0004048429,0.00036747137,0.000086246786,0.00034022977],"domain_scores_gemma":[0.9991886,0.000039923958,0.00010793152,0.00046602436,0.0001031176,0.00009440644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049362,0.0001373107,0.00030808226,0.00009630928,0.00018090905,0.00005976743,0.00017274442,0.00009455623,0.000032521035],"category_scores_gemma":[0.00010480825,0.00013884247,0.00014409448,0.00018878347,0.000056640478,0.000046452617,0.00008447807,0.000111949375,0.00029738699],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056134263,0.00006686659,0.01347505,0.0002694634,0.000045487883,0.000011971926,0.00035676043,0.00004803048,0.97042763,0.00014362125,0.013446546,0.0011472343],"study_design_scores_gemma":[0.0063736723,0.00037468097,0.5988068,0.00022881132,0.00026617383,0.00006923959,0.00052873505,0.007947581,0.16199748,0.0010828174,0.22156991,0.00075411884],"about_ca_topic_score_codex":0.00007209184,"about_ca_topic_score_gemma":0.00016958866,"teacher_disagreement_score":0.80843014,"about_ca_system_score_codex":0.0003054801,"about_ca_system_score_gemma":0.00024755075,"threshold_uncertainty_score":0.56618315},"labels":[],"label_agreement":null},{"id":"W4365137016","doi":"10.1016/j.chom.2023.02.010","title":"One population, multiple lifestyles: Commensalism and pathogenesis in the human mycobiome","year":2023,"lang":"en","type":"review","venue":"Cell Host & Microbe","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Human Genome Research Institute; NHLBI Division of Intramural Research; National Institutes of Health; Canadian Institute for Advanced Research","keywords":"Biology; Commensalism; Microbiome; Candida albicans; Colonization; Population; Microbiology; Human microbiome; Immunity; Disease; Immunology; Immune system; Bioinformatics; Genetics; Bacteria; Pathology","score_opus":0.07967631283293641,"score_gpt":0.3490870555069888,"score_spread":0.2694107426740524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4365137016","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.030677384,0.96723956,0.000002954211,0.000096800184,0.00009576052,0.001500859,0.00017865047,0.00006189637,0.00014612848],"genre_scores_gemma":[0.01247871,0.98413044,0.00007873762,0.00033906745,0.00021518947,0.00007025601,0.0012377627,0.00008873662,0.0013611239],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977708,0.00029738995,0.0007714199,0.0005749984,0.00022036384,0.00036507056],"domain_scores_gemma":[0.99840856,0.0004232413,0.00024480067,0.00076625997,0.00005818491,0.0000989714],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007592311,0.000383989,0.0014546636,0.0002136302,0.0001810914,0.00004920494,0.0002448507,0.00037004804,0.000033099914],"category_scores_gemma":[0.000117749536,0.0002795555,0.0003151648,0.0005213705,0.00012425674,0.000037490187,0.00011792447,0.00048173318,0.00015123087],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012115055,0.003398196,0.1765097,0.32787305,0.0006893484,0.0010134827,0.0058698603,2.3064749e-7,0.014852127,0.00029095574,0.021546412,0.44783548],"study_design_scores_gemma":[0.0008669013,0.00010187585,0.101952106,0.013878438,0.0011065252,0.000032863405,0.00030501952,9.3448546e-7,0.000020284326,0.000028201888,0.88117725,0.0005296125],"about_ca_topic_score_codex":0.0004062169,"about_ca_topic_score_gemma":0.00051683,"teacher_disagreement_score":0.8596308,"about_ca_system_score_codex":0.0001247892,"about_ca_system_score_gemma":0.00009445426,"threshold_uncertainty_score":0.99996567},"labels":[],"label_agreement":null},{"id":"W4365146522","doi":"10.1038/s41467-023-37573-y","title":"A host defense peptide mimetic, brilacidin, potentiates caspofungin antifungal activity against human pathogenic fungi","year":2023,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; National Eye Institute; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Aspergillus fumigatus; Caspofungin; Cryptococcus neoformans; Microbiology; Aspergillosis; Fungal keratitis; Biology; Amphotericin B; Candida albicans; Antifungal drug; Aspergillus; Voriconazole; Drug resistance; Echinocandin; Antifungal; Immunology; Fluconazole; Keratitis","score_opus":0.032280799416423304,"score_gpt":0.32926039849122,"score_spread":0.2969795990747967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4365146522","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9793351,0.009409189,0.00003285469,0.002757893,0.00015834371,0.0006389624,0.00015162352,0.00051032,0.0070056836],"genre_scores_gemma":[0.9917964,0.0033333434,0.0009547622,0.0005607304,0.00009878949,0.000048789276,0.000614824,0.000058539492,0.0025338265],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978089,0.00027987218,0.00039696196,0.00051019504,0.00046055487,0.0005435246],"domain_scores_gemma":[0.9953576,0.00044707785,0.00015914673,0.0033971735,0.0003896014,0.00024943982],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007523804,0.00030214022,0.00047803702,0.0002963962,0.00083669455,0.00006362301,0.000751262,0.00048498067,0.00007465338],"category_scores_gemma":[0.0006341531,0.0002893511,0.00039845172,0.0012676949,0.00032224582,0.00017404463,0.00049476087,0.001757304,0.00041435703],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001426611,0.00051461364,0.20744137,0.00010980727,0.00019753297,0.0000890371,0.00029362057,0.0000025831596,0.7717805,0.0018379395,0.015823461,0.0017668749],"study_design_scores_gemma":[0.0007444226,0.00009863655,0.9750091,0.0001680904,0.00018724376,0.000030062065,0.00035466597,0.00043072435,0.007782879,0.00011960369,0.014735233,0.00033935852],"about_ca_topic_score_codex":0.000054981097,"about_ca_topic_score_gemma":0.0011018628,"teacher_disagreement_score":0.7675677,"about_ca_system_score_codex":0.00015622645,"about_ca_system_score_gemma":0.00019255851,"threshold_uncertainty_score":0.9999559},"labels":[],"label_agreement":null},{"id":"W4366186257","doi":"10.1016/j.jid.2023.03.1022","title":"1011 Potent antifungal activity of pentagalloyl glucose against drug-resistant candida albicans, candida auris, and other non-albicans candida species","year":2023,"lang":"en","type":"article","venue":"Journal of Investigative Dermatology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Candida auris; Fluconazole; Candida albicans; Microbiology; Antifungal drug; Biology; Corpus albicans; Drug resistance; Virulence; Antifungal; Biochemistry","score_opus":0.024015123789551417,"score_gpt":0.27523664043897067,"score_spread":0.2512215166494193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4366186257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99186635,0.0009181542,0.00005113894,0.0046736915,0.0002699338,0.00040722082,0.00019018237,0.000029891024,0.0015934359],"genre_scores_gemma":[0.99700195,0.0007244386,0.00027960053,0.0010302304,0.00014059189,0.000007968411,0.000016448359,0.000046159978,0.0007525917],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9966773,0.00038837577,0.0011366043,0.00043396896,0.00072371267,0.0006400679],"domain_scores_gemma":[0.9969735,0.00040232646,0.0010487149,0.00040940914,0.00052884914,0.00063716975],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006910503,0.00042296542,0.0015134944,0.00048869976,0.00020796103,0.000031580203,0.00026505106,0.000215692,0.00012769582],"category_scores_gemma":[0.0006485832,0.00033297815,0.000323191,0.0006307639,0.0019164373,0.0002239227,0.00012140457,0.0007686833,0.000013598862],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015829045,0.00025991086,0.4143846,0.00052923925,0.0006501911,0.0016361796,0.0027953244,0.000011450953,0.55946004,0.0002985091,0.018057317,0.0003343283],"study_design_scores_gemma":[0.002515007,0.00039212778,0.6196391,0.00049879536,0.00027264902,0.00045225394,0.002726975,0.0001347572,0.3686618,0.00030696217,0.004105745,0.00029385075],"about_ca_topic_score_codex":0.0013630411,"about_ca_topic_score_gemma":0.0034206249,"teacher_disagreement_score":0.20525448,"about_ca_system_score_codex":0.0002641537,"about_ca_system_score_gemma":0.0012168536,"threshold_uncertainty_score":0.9999122},"labels":[],"label_agreement":null},{"id":"W4366429975","doi":"10.1101/2023.04.18.537379","title":"Use of a human small airway epithelial cell line to study the interactions of <i>Aspergillus fumigatus</i> with pulmonary epithelial cells","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Institutes of Health","keywords":"Aspergillus fumigatus; A549 cell; Cell biology; Endocytosis; Biology; Microbiology; Cell culture; Cell; Chemistry; Immunology; Biochemistry","score_opus":0.044633038559684285,"score_gpt":0.26614350190235275,"score_spread":0.22151046334266847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4366429975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99441767,0.00009862346,0.00048755962,0.0002505635,0.0006669997,0.002792311,0.0010869271,0.00018540428,0.000013920686],"genre_scores_gemma":[0.99728703,0.000085940825,0.0015168127,0.00014214678,0.00040269518,0.00019959435,0.0000012724154,0.00018081663,0.00018370958],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99619216,0.00028632185,0.0011342425,0.0011296518,0.0007178914,0.00053971505],"domain_scores_gemma":[0.99503946,0.0002916456,0.00068989524,0.0024622479,0.0011773864,0.0003393871],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008859942,0.0006458015,0.0012172596,0.0003450888,0.00020715527,0.000061918596,0.00059265434,0.00029956526,0.000074507436],"category_scores_gemma":[0.00023403922,0.0004742266,0.0003465469,0.00086521305,0.00031374922,0.00009677909,0.00064577005,0.0011987489,0.000050194347],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010390417,0.0020976753,0.026965668,0.00068121,0.00041811567,0.00018325112,0.0001529377,0.0001828188,0.9681549,0.000023621624,0.00009483578,0.0000059078225],"study_design_scores_gemma":[0.00078908313,0.0010972996,0.21986176,0.00055581704,0.0006904317,4.1406427e-8,0.00010698036,0.00006162514,0.7757795,9.092474e-7,0.0006240745,0.00043251045],"about_ca_topic_score_codex":0.0008165299,"about_ca_topic_score_gemma":0.00025317672,"teacher_disagreement_score":0.1928961,"about_ca_system_score_codex":0.00018247047,"about_ca_system_score_gemma":0.0006604789,"threshold_uncertainty_score":0.99977094},"labels":[],"label_agreement":null},{"id":"W4366594028","doi":"10.3389/fped.2023.1145252","title":"Fungal infection and neurodevelopmental outcomes at 18–30 months in preterm infants","year":2023,"lang":"en","type":"article","venue":"Frontiers in Pediatrics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Women and Children’s Health Research Institute; Princess Margaret Cancer Centre; University of Alberta; Université de Montréal; University of Toronto; Centre Hospitalier Universitaire Sainte-Justine; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Incidence (geometry); Pediatrics; Gestational age; Population; Retrospective cohort study; Confounding; Neonatal intensive care unit; Cohort; Cohort study; Chorioamnionitis; Pregnancy; Internal medicine","score_opus":0.01579196039113849,"score_gpt":0.2732108116672074,"score_spread":0.2574188512760689,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4366594028","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971871,0.0003671616,0.000043832773,0.00009525226,0.00089355407,0.000371027,0.000012516184,0.00007254551,0.00095702696],"genre_scores_gemma":[0.99612236,0.0019171819,0.0005131591,0.00011807929,0.00006491274,0.000018932673,0.000026452122,0.000018257673,0.001200637],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986908,0.000043035736,0.00032765442,0.0003430099,0.00026841395,0.00032711323],"domain_scores_gemma":[0.9995749,0.00006429935,0.000056092722,0.00018046823,0.00002429966,0.00009995298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032759606,0.00015145287,0.0003223335,0.00045007397,0.000057160672,0.000014164423,0.000049989427,0.00013671708,0.000030905743],"category_scores_gemma":[0.0003942854,0.0001437397,0.000050257888,0.000680808,0.000058464084,0.00012425207,0.00010500271,0.0002508665,0.000024934661],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017045494,0.000045389315,0.9851616,0.00012133087,0.0000066100265,0.00011979543,0.0003523239,0.000007313678,0.000030630905,0.0000018454143,0.010479485,0.0035031945],"study_design_scores_gemma":[0.0012486465,0.000058837675,0.997261,0.000016551658,0.000021019143,0.0000042797888,0.00013036816,0.00050931174,0.000023502987,0.00008618383,0.00050509506,0.00013523661],"about_ca_topic_score_codex":0.000063756546,"about_ca_topic_score_gemma":0.00019718439,"teacher_disagreement_score":0.012099341,"about_ca_system_score_codex":0.00026157632,"about_ca_system_score_gemma":0.00008476429,"threshold_uncertainty_score":0.5861535},"labels":[],"label_agreement":null},{"id":"W4367043334","doi":"10.1016/j.cmi.2023.04.025","title":"Molecular characterization of Candida auris outbreak isolates in Qatar from patients with COVID-19 reveals the emergence of isolates resistant to three classes of antifungal drugs","year":2023,"lang":"en","type":"article","venue":"Clinical Microbiology and Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Simon Fraser University; Sidra Medicine; McMaster University; Hamad Medical Corporation","keywords":"Candida auris; Fluconazole; Biology; Outbreak; Echinocandin; Drug resistance; Pandemic; Microbiology; Virology; Amphotericin B; Multiple drug resistance; Medicine; Coronavirus disease 2019 (COVID-19); Antifungal; Disease; Internal medicine; Infectious disease (medical specialty)","score_opus":0.02083224767065507,"score_gpt":0.3165588543285498,"score_spread":0.29572660665789474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367043334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985427,0.00006661249,0.00026947894,0.0003524516,0.0001136595,0.00041486524,0.00021284632,0.000013053704,0.000014327835],"genre_scores_gemma":[0.99914,0.0003073797,0.00003509303,0.00022579584,0.000016278935,0.000006170239,0.0002490868,0.000007030281,0.000013126204],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986867,0.00015603729,0.0007109636,0.00027403343,0.000039973584,0.00013231527],"domain_scores_gemma":[0.9987914,0.00044646373,0.000298331,0.00023030321,0.00017208478,0.000061434934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000597314,0.00010464198,0.00044987779,0.000091221,0.000042844527,0.000002186384,0.000056628272,0.00017490456,0.000041936422],"category_scores_gemma":[0.00092895323,0.000068326495,0.000072036215,0.00036550438,0.0003314565,0.00004806431,0.000051063085,0.00015371092,0.000002655255],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011666717,0.000105102496,0.5776162,0.00008167999,0.000038380404,4.4129067e-7,0.00012071494,0.0000025456682,0.4206096,0.000016276921,0.000056908237,0.00018548012],"study_design_scores_gemma":[0.0008243172,0.0010666118,0.9776324,0.00015941753,0.00006376767,4.205204e-7,0.00006387787,0.000020107305,0.019849923,0.00012025445,0.00013349668,0.00006538785],"about_ca_topic_score_codex":0.0006028917,"about_ca_topic_score_gemma":0.0007385002,"teacher_disagreement_score":0.40075967,"about_ca_system_score_codex":0.000015067252,"about_ca_system_score_gemma":0.0000894389,"threshold_uncertainty_score":0.27862737},"labels":[],"label_agreement":null},{"id":"W4367173864","doi":"10.1128/mbio.00636-23","title":"Genomic Analyses of a Fungemia Outbreak Caused by Lodderomyces elongisporus in a Neonatal Intensive Care Unit in Delhi, India","year":2023,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"International Centre for Genetic Engineering and Biotechnology; University Grants Commission; McMaster University; University of Delhi; Canadian Institute for Advanced Research","keywords":"Outbreak; Biology; Neonatal intensive care unit; Multilocus sequence typing; Fungemia; Microbiology; Genotyping; Pathogen; Fluconazole; Medicine; Genotype; Virology; Genetics; Pediatrics; Antifungal; Gene","score_opus":0.04473762072008631,"score_gpt":0.3404910791360648,"score_spread":0.2957534584159785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367173864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99640167,0.0027641966,0.000006022539,0.00014790935,0.000049625134,0.0002958383,0.0001060486,0.000036319125,0.00019235974],"genre_scores_gemma":[0.99888444,0.00015747183,0.000015480427,0.00019167902,0.000018309982,0.000012635751,0.0002727545,0.000018291857,0.00042894392],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99869496,0.00005110446,0.00040326966,0.00032521834,0.00021069209,0.0003147767],"domain_scores_gemma":[0.99918854,0.00009261599,0.00008675694,0.00031265634,0.0002356863,0.00008371315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017112811,0.00015748537,0.00048045133,0.00035950422,0.000022315699,0.0000074106215,0.000115677074,0.00014043477,0.00008599625],"category_scores_gemma":[0.00027956654,0.00014109768,0.0000959875,0.00088996504,0.00012163926,0.000054797518,0.00006824792,0.00025120124,0.00005083578],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028362626,0.000021987402,0.9467752,0.00017259689,0.000045491324,0.00035794228,0.00705757,0.000011366299,0.04357542,0.0000041936123,0.0006447897,0.0010498401],"study_design_scores_gemma":[0.0013267199,0.00011951247,0.9490411,0.00018412343,0.000044634202,0.000002960407,0.035152975,0.00006267511,0.013676012,0.000023403976,0.00024140935,0.00012444457],"about_ca_topic_score_codex":0.002338314,"about_ca_topic_score_gemma":0.007214229,"teacher_disagreement_score":0.029899409,"about_ca_system_score_codex":0.00010908894,"about_ca_system_score_gemma":0.00019124945,"threshold_uncertainty_score":0.57537967},"labels":[],"label_agreement":null},{"id":"W4367174641","doi":"10.1002/wsbm.1610","title":"A One Health approach to overcoming fungal disease and antifungal resistance","year":2023,"lang":"en","type":"review","venue":"WIREs Mechanisms of Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Institute of Infection and Immunity; Canadian Institutes of Health Research; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Antifungal; Disease; Fungal disease; Repurposing; Drug resistance; Human health; Fungicide; Biology; Biotechnology; Medicine; Environmental health; Microbiology; Ecology","score_opus":0.08180993800343003,"score_gpt":0.3521486378589045,"score_spread":0.27033869985547443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367174641","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017587689,0.99088764,0.0026627118,0.00036373804,0.00017930601,0.0034804835,0.001703894,0.00019742738,0.00034893275],"genre_scores_gemma":[0.0037356813,0.98783267,0.0031585682,0.0004005556,0.00022476309,0.00028051334,0.00042415477,0.00019309908,0.0037499832],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9953983,0.00028411177,0.0011942303,0.001357032,0.001015727,0.000750627],"domain_scores_gemma":[0.9952955,0.00020190155,0.00051428826,0.0013599362,0.00013965736,0.0024886762],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00079500664,0.0006750097,0.0030012468,0.00040101173,0.00020788307,0.00005024057,0.00033640995,0.00018932876,0.000028458147],"category_scores_gemma":[0.00078857323,0.00062494725,0.0007989983,0.00058620045,0.00016000867,0.00010856843,0.00031136558,0.0004371297,0.00006016335],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0049976236,0.002765805,0.00023481835,0.7176553,0.0013174647,0.00040098082,0.00030963094,0.000001472476,0.000049044833,0.053810194,0.007130908,0.21132675],"study_design_scores_gemma":[0.006176587,0.0020967096,0.03304561,0.534907,0.0244357,0.000019761748,0.0008498482,0.00016326795,0.000037482183,0.026299613,0.36570266,0.006265784],"about_ca_topic_score_codex":0.000023276383,"about_ca_topic_score_gemma":0.000032190568,"teacher_disagreement_score":0.35857174,"about_ca_system_score_codex":0.0002537715,"about_ca_system_score_gemma":0.0020679764,"threshold_uncertainty_score":0.9996202},"labels":[],"label_agreement":null},{"id":"W4368370348","doi":"10.1101/2023.05.03.539243","title":"Cross-feeding affects the target of resistance evolution to an antifungal drug","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Université de Montréal; PROTEO","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fonds de Recherche du Québec - Santé; Genome Canada","keywords":"Biology; Drug resistance; Mutant; Cytosine deaminase; Antifungal drug; Genetics; Fluconazole; Saccharomyces cerevisiae; Computational biology; Gene; Microbiology; Antifungal","score_opus":0.020542830649941498,"score_gpt":0.2773008864658867,"score_spread":0.2567580558159452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4368370348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932361,0.0010195087,0.0016585984,0.00068729086,0.0013583777,0.0011773771,0.00034827567,0.00047277944,0.000041665782],"genre_scores_gemma":[0.99471605,0.000076139615,0.0037049162,0.00016799271,0.00070238445,0.00013098976,0.0000011789718,0.00015932923,0.0003409922],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99602664,0.00023237031,0.00073799654,0.001335745,0.0009333849,0.00073385064],"domain_scores_gemma":[0.99552435,0.00019877075,0.00047230732,0.0023589265,0.001010317,0.00043531889],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0024122442,0.0005623799,0.0009341591,0.0003051313,0.00031651388,0.00015681305,0.0006901699,0.00045503033,0.00005444904],"category_scores_gemma":[0.0014325981,0.00047664403,0.00030886396,0.0010330509,0.00034740017,0.00020676028,0.0004888367,0.0010318225,0.00008433295],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048428652,0.00018142673,0.32731822,0.0016596523,0.00013910007,0.00006362476,0.000056941513,0.00008702505,0.66726995,0.0007552299,0.0019839215,6.183192e-7],"study_design_scores_gemma":[0.0004188119,0.000084918,0.86467934,0.0012870561,0.00013039698,9.841652e-9,0.000026321472,0.0001339542,0.13169391,0.000008557018,0.0011061114,0.00043062496],"about_ca_topic_score_codex":0.00011851385,"about_ca_topic_score_gemma":0.000053779393,"teacher_disagreement_score":0.5373611,"about_ca_system_score_codex":0.00053770444,"about_ca_system_score_gemma":0.0009903192,"threshold_uncertainty_score":0.9997685},"labels":[],"label_agreement":null},{"id":"W4377115628","doi":"10.1371/journal.pbio.3001822","title":"Candida albicans selection for human commensalism results in substantial within-host diversity without decreasing fitness for invasive disease","year":2023,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Institute of General Medical Sciences; Canadian Institute for Advanced Research; National Human Genome Research Institute; University of Michigan","keywords":"Biology; Commensalism; Candida albicans; Corpus albicans; Microbiology; Host (biology); Virulence; Population; Pathogen; Genetic diversity; Genetics; Bacteria; Gene","score_opus":0.07588450280281343,"score_gpt":0.3445004338570925,"score_spread":0.26861593105427906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377115628","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99621487,0.00002553048,0.00032793861,0.0014679509,0.00013047333,0.0011889163,0.00048846,0.0000924634,0.00006339391],"genre_scores_gemma":[0.9979615,0.000019091854,0.00022074893,0.0003443896,0.00015000977,0.000078189674,0.0009524182,0.000017405295,0.00025623987],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987242,0.00008708532,0.00029403844,0.00043692242,0.00009366275,0.00036405944],"domain_scores_gemma":[0.9989235,0.00043707396,0.00010781725,0.00019229816,0.00018372883,0.000155594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039742695,0.00014319747,0.00035670662,0.00013727763,0.00038082138,0.000008580865,0.000094425835,0.00013435946,0.000011168545],"category_scores_gemma":[0.0013344412,0.00012756964,0.00009522222,0.00025390033,0.00016502314,0.000048893115,0.000073537856,0.0001320266,0.0000036469746],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0077019283,0.00016152122,0.9578091,0.00021659833,0.00006948987,0.000010830794,0.0009728605,0.0000029199527,0.03149858,0.0008932549,0.0006004757,0.000062450956],"study_design_scores_gemma":[0.007365374,0.0008425509,0.9778373,0.00022925161,0.00024053811,0.0000024272804,0.00071327185,0.0013271992,0.007208554,0.0035369745,0.00042567527,0.00027085879],"about_ca_topic_score_codex":0.0012489399,"about_ca_topic_score_gemma":0.0189225,"teacher_disagreement_score":0.024290027,"about_ca_system_score_codex":0.00014968216,"about_ca_system_score_gemma":0.00019025822,"threshold_uncertainty_score":0.9989796},"labels":[],"label_agreement":null},{"id":"W4378194556","doi":"10.1007/978-3-031-26078-0_10","title":"New Systemic Antifungal: Isavuconazole","year":2023,"lang":"en","type":"book-chapter","venue":"Emerging infectious diseases of the 21st century","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"","keywords":"Posaconazole; Voriconazole; Itraconazole; Azole; Aspergillosis; Aspergillus fumigatus; Echinocandins; Medicine; Antifungal; Drug; Pharmacology; Biology; Immunology; Caspofungin; Dermatology","score_opus":0.01211429217030642,"score_gpt":0.2500974102929641,"score_spread":0.2379831181226577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378194556","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028266633,0.043403525,0.00005612486,0.000648452,0.0111531075,0.0031313805,0.00097464357,0.0015228458,0.9108433],"genre_scores_gemma":[0.5714142,0.0060269325,0.0000075595226,0.00020857417,0.0007837149,0.0000083436635,0.00010219873,0.00017428458,0.4212742],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975837,0.00004035081,0.0006673015,0.000568712,0.00074670004,0.00039323565],"domain_scores_gemma":[0.9976039,0.00012508362,0.00049671443,0.0012555358,0.00021071946,0.0003080623],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001491724,0.00048205716,0.0008880599,0.00019514062,0.00018724872,0.000024436182,0.00032311666,0.0003084087,0.0008958565],"category_scores_gemma":[0.00023191336,0.00036647607,0.0011166004,0.00014581757,0.00019076376,0.00006791435,0.00025650905,0.0005560973,0.00033547086],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001167517,0.0006544419,0.5995201,0.014538909,0.004739846,0.00028346508,0.0007378826,0.00016547019,0.0024342248,0.16534515,0.16589248,0.044520497],"study_design_scores_gemma":[0.009897684,0.0011330897,0.39519098,0.042255938,0.015339433,0.0005356078,0.0016475399,0.0001008875,0.00080066954,0.025884425,0.5025248,0.0046889656],"about_ca_topic_score_codex":0.00011021504,"about_ca_topic_score_gemma":0.000046266672,"teacher_disagreement_score":0.54314756,"about_ca_system_score_codex":0.00024540827,"about_ca_system_score_gemma":0.00058896496,"threshold_uncertainty_score":0.9998787},"labels":[],"label_agreement":null},{"id":"W4378976089","doi":"10.1080/14787210.2023.2220964","title":"Part 1: Mucormycosis: prevalence, risk factors, clinical features, and diagnosis","year":2023,"lang":"en","type":"review","venue":"Expert Review of Anti-infective Therapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Mucormycosis; Mucorales; Zygomycosis; Medicine; Dermatology; Intensive care medicine; Surgery; Amphotericin B; Antifungal","score_opus":0.10239419648871817,"score_gpt":0.448617742508279,"score_spread":0.34622354601956085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378976089","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009740982,0.9934313,0.000006510193,0.00006477619,0.0005879876,0.004223901,0.0003215868,0.00014312223,0.0002467117],"genre_scores_gemma":[0.000060244678,0.99764866,0.00006871669,0.00041329468,0.0006460793,0.0005194795,0.0001805178,0.00013872677,0.00032425826],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9939144,0.0015838868,0.002123809,0.0012530574,0.0006228559,0.00050198595],"domain_scores_gemma":[0.994309,0.002249252,0.0014449117,0.0013239437,0.0003468963,0.0003259798],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002478138,0.00095330144,0.006866577,0.0002008605,0.00015021303,0.000026337348,0.00032654905,0.0006329751,0.00041950235],"category_scores_gemma":[0.0022303616,0.00058367953,0.002650508,0.0007604431,0.00054298557,0.00012838907,0.00012951101,0.0011896343,0.00007288213],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003613242,0.0005490587,0.056174997,0.14937276,0.0014402734,0.00002001749,0.00007493577,1.6978567e-9,4.5424738e-7,0.000023650342,0.026196983,0.7661107],"study_design_scores_gemma":[0.0004098525,0.0006504515,0.035860345,0.218527,0.001310557,0.000018237344,0.00001647134,6.7758585e-8,0.000008173534,0.000013895315,0.7427726,0.0004123746],"about_ca_topic_score_codex":0.00011605262,"about_ca_topic_score_gemma":0.000009626351,"teacher_disagreement_score":0.7656984,"about_ca_system_score_codex":0.00011792033,"about_ca_system_score_gemma":0.00047971617,"threshold_uncertainty_score":0.99966145},"labels":[],"label_agreement":null},{"id":"W4379515419","doi":"10.1101/2023.06.05.543712","title":"Enhanced fungal specificity and <i>in vivo</i> therapeutic efficacy of a C-22 modified FK520 analog against <i>C. neoformans</i>","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; Canadian Institute for Advanced Research; National Institutes of Health; National Science Foundation","keywords":"Calcineurin; Cryptococcus neoformans; In vivo; Biology; Cryptococcosis; Microbiology; Immunosuppression; Pharmacology; Immunology; Medicine; Transplantation; Internal medicine; Biotechnology","score_opus":0.025642220765632155,"score_gpt":0.2544863975449166,"score_spread":0.22884417677928443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379515419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99464476,0.0012403083,0.00146186,0.0001406933,0.00048162727,0.0013538143,0.00025948157,0.00028225742,0.00013517626],"genre_scores_gemma":[0.9970484,0.0016758846,0.00044695172,0.00032475733,0.00024710482,0.000082808445,0.0000010670395,0.0001330349,0.000039995808],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9960727,0.00015902378,0.0010734622,0.0012895336,0.0006352841,0.00077001326],"domain_scores_gemma":[0.99701804,0.00022498218,0.00046994293,0.0015441866,0.000405452,0.00033740792],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010193305,0.00066637364,0.001396788,0.00041249153,0.00010548677,0.0000677043,0.0003700491,0.0006668659,0.000036635844],"category_scores_gemma":[0.00028586996,0.0006578121,0.00030455142,0.00080953445,0.00036077196,0.0001194622,0.0003626864,0.0011713055,0.0000229331],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011140443,0.0005201857,0.054145817,0.0015696336,0.00022645667,0.00014975217,0.000039248655,0.000081492384,0.9417813,0.00019632424,0.00015698974,0.000018788372],"study_design_scores_gemma":[0.002218668,0.00013483445,0.66148984,0.0011713442,0.00019841261,2.4798812e-8,0.000016262782,0.0007726021,0.3331169,0.000006057511,0.00025782612,0.0006172125],"about_ca_topic_score_codex":0.00008010518,"about_ca_topic_score_gemma":0.00003848144,"teacher_disagreement_score":0.6086644,"about_ca_system_score_codex":0.0002822334,"about_ca_system_score_gemma":0.0006807288,"threshold_uncertainty_score":0.9995873},"labels":[],"label_agreement":null},{"id":"W4379769599","doi":"10.1128/mra.00338-23","title":"Genome Sequence of Lichtheimia ornata, an Emerging Opportunistic Mucorales Pathogen","year":2023,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Broad Institute; Canadian Institute for Advanced Research","keywords":"Mucorales; Mucormycosis; Opportunistic pathogen; Biology; Whole genome sequencing; Genome; Pathogen; Fungal pathogen; Virology; Microbiology; Gene; Genetics; Medicine; Pathology; Virulence","score_opus":0.08713835896300508,"score_gpt":0.34155699610827206,"score_spread":0.25441863714526697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379769599","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948516,0.00024024454,0.000049570608,0.0002574061,0.0000951859,0.00033757082,0.0030745855,0.00011901743,0.0009748215],"genre_scores_gemma":[0.97703165,0.0001525925,0.00018797109,0.00051233644,0.00008730316,0.000016061456,0.017066743,0.000031050928,0.004914302],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99824494,0.00012337424,0.00048140614,0.0005097793,0.00013613541,0.00050438714],"domain_scores_gemma":[0.9988421,0.0000458308,0.00017590993,0.0006248927,0.00015952461,0.00015172298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006148591,0.0002118875,0.0004558448,0.00017923221,0.00013917753,0.000009327037,0.00026710777,0.00015876506,0.0002499012],"category_scores_gemma":[0.00010610082,0.00018583529,0.00011195137,0.0004149309,0.00035991223,0.000070780065,0.00013031039,0.00018612645,0.00019781539],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002089675,0.00010904856,0.10441506,0.00009930816,0.000082638704,0.00014711819,0.00039830318,0.0000063462057,0.8928904,0.000034143435,0.00084665796,0.00076204224],"study_design_scores_gemma":[0.0024487309,0.001966069,0.08943147,0.00034037765,0.00031413895,0.00021852263,0.004435243,0.00024750555,0.0038859916,0.00018984209,0.89576614,0.0007559382],"about_ca_topic_score_codex":0.00002571914,"about_ca_topic_score_gemma":0.000020782802,"teacher_disagreement_score":0.8949195,"about_ca_system_score_codex":0.00007213246,"about_ca_system_score_gemma":0.00014537225,"threshold_uncertainty_score":0.7578143},"labels":[],"label_agreement":null},{"id":"W4379966780","doi":"10.1093/g3journal/jkad126","title":"In host evolution of <i>Exophiala dermatitidis</i> in cystic fibrosis lung micro-environment","year":2023,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; Canadian Institute for Advanced Research; National Science Foundation; National Institutes of Health; Cystic Fibrosis Foundation","keywords":"Cystic fibrosis; Host (biology); Lung; Microbiology; Biology; Pathology; Medicine; Ecology; Genetics; Internal medicine","score_opus":0.010162475671212876,"score_gpt":0.24784764679249474,"score_spread":0.23768517112128187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379966780","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.856086,0.14266407,0.00021826601,0.00025240632,0.0001029972,0.00043788037,0.000046220954,0.000019865367,0.00017228459],"genre_scores_gemma":[0.93744063,0.06045664,0.0014235141,0.000078252604,0.0000668827,0.00003766751,0.000041949632,0.000025109492,0.00042936427],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99839103,0.000069868634,0.0005450992,0.00032916432,0.0002841389,0.00038070595],"domain_scores_gemma":[0.99929166,0.000062761,0.00009396881,0.0004306253,0.00003383398,0.000087138214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027434985,0.0001731499,0.0003676544,0.00026690835,0.000033845998,0.0000069635375,0.00011863412,0.00012379354,0.000086610824],"category_scores_gemma":[0.0000113854885,0.00017744453,0.000096832504,0.0005388917,0.00012475924,0.000038726037,0.000097429365,0.000116086856,0.0001025403],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007886257,0.00010435801,0.7082732,0.00038990067,0.00001541467,0.000033662298,0.0003884599,0.0009821781,0.27917865,0.000014281242,0.00026786607,0.010273232],"study_design_scores_gemma":[0.0010253679,0.00013395888,0.95154995,0.00012689973,0.00005641017,0.0000069999255,0.0006219303,0.0014558655,0.035642456,0.00016536673,0.0090052495,0.00020953408],"about_ca_topic_score_codex":0.00006475361,"about_ca_topic_score_gemma":0.00013312187,"teacher_disagreement_score":0.24353619,"about_ca_system_score_codex":0.00032960315,"about_ca_system_score_gemma":0.00013312818,"threshold_uncertainty_score":0.7235978},"labels":[],"label_agreement":null},{"id":"W4380148971","doi":"10.1016/j.addr.2023.114960","title":"Candidiasis: From cutaneous to systemic, new perspectives of potential targets and therapeutic strategies","year":2023,"lang":"en","type":"review","venue":"Advanced Drug Delivery Reviews","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Candida albicans; Systemic candidiasis; Immune system; Immunology; Corpus albicans; Mucocutaneous zone; Pathogen; Biology; Dysbiosis; Antibiotics; Microbiology; Medicine; Disease; Pathology","score_opus":0.0427344289016157,"score_gpt":0.34305160192786593,"score_spread":0.3003171730262502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380148971","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014408901,0.994504,0.00018137333,0.000035949786,0.00023189039,0.003249601,0.00015841205,0.00008408309,0.000113801296],"genre_scores_gemma":[0.0016183445,0.9957369,0.00084027305,0.00006054551,0.00025602648,0.000110001194,0.00009271705,0.00009074136,0.0011944722],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965613,0.0003151992,0.001369993,0.000966159,0.00035483687,0.0004325268],"domain_scores_gemma":[0.9977035,0.00028002664,0.00063616567,0.00085807155,0.00016804776,0.00035417595],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031827562,0.00066074316,0.004414474,0.00018593228,0.000078571255,0.000042144555,0.00025431276,0.00021175215,0.000086818545],"category_scores_gemma":[0.00019579558,0.00047645034,0.0008342799,0.0004505447,0.00011181722,0.00014053556,0.00010988524,0.00041301895,0.0002224063],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012053269,0.000052387193,0.000012703168,0.031822965,0.00042700692,0.00011217744,0.00083818997,0.000003746303,0.000121677826,0.000035722962,0.00057956605,0.9658733],"study_design_scores_gemma":[0.0004894238,0.00024389413,0.000036921185,0.09364845,0.004314817,0.00014241482,0.006848233,0.000004778226,0.0000100286,0.00019738362,0.89333606,0.0007276249],"about_ca_topic_score_codex":0.0003991378,"about_ca_topic_score_gemma":0.0002748945,"teacher_disagreement_score":0.9651457,"about_ca_system_score_codex":0.00022971946,"about_ca_system_score_gemma":0.00081692764,"threshold_uncertainty_score":0.99976873},"labels":[],"label_agreement":null},{"id":"W4380870592","doi":"10.1128/mbio.00479-23","title":"Small molecules restore azole activity against drug-tolerant and drug-resistant <i>Candida</i> isolates","year":2023,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Chan Zuckerberg Initiative; Canadian Institute for Advanced Research; National Institutes of Health; Centre Hospitalier Universitaire Vaudois; Brown University","keywords":"Fluconazole; Azole; Candida albicans; Potentiator; Microbiology; Corpus albicans; Drug; Antifungal drug; Biology; Pharmacology; Antifungal","score_opus":0.020582135142138417,"score_gpt":0.25381078365925164,"score_spread":0.23322864851711322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380870592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923761,0.0008535226,0.000042962754,0.0023733173,0.00010480207,0.00032980373,0.000042281892,0.00023734901,0.0036398696],"genre_scores_gemma":[0.9936302,0.00041067897,0.00015105,0.0005294799,0.000095568364,0.000017571328,0.00003252185,0.000034285495,0.0050987024],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99851304,0.000072002746,0.00023735715,0.00049690565,0.00023613255,0.00044457545],"domain_scores_gemma":[0.9991051,0.00012409604,0.00007042477,0.00039540007,0.000077933924,0.00022703476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003763638,0.00022869106,0.0003965051,0.00010425464,0.00020757187,0.000043520522,0.00010157333,0.00009324821,0.000024997042],"category_scores_gemma":[0.00011026712,0.00019274847,0.00012418457,0.0003319588,0.00019310742,0.000074802054,0.00009653633,0.0002660808,0.000104993196],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024834299,0.0004948919,0.20485571,0.0009482473,0.00017907668,0.00070145185,0.0026373006,0.000014713486,0.73808944,0.0003675714,0.02983213,0.019396048],"study_design_scores_gemma":[0.0021607892,0.0001784875,0.93173635,0.0004483837,0.00012367313,0.000010031461,0.0013408655,0.0017393312,0.04022271,0.0003559363,0.021158375,0.00052505406],"about_ca_topic_score_codex":0.00028773167,"about_ca_topic_score_gemma":0.001143789,"teacher_disagreement_score":0.72688067,"about_ca_system_score_codex":0.000074382326,"about_ca_system_score_gemma":0.00011205603,"threshold_uncertainty_score":0.78600544},"labels":[],"label_agreement":null},{"id":"W4382051129","doi":"10.1016/j.chembiol.2023.06.005","title":"Identification of triazenyl indoles as inhibitors of fungal fatty acid biosynthesis with broad-spectrum activity","year":2023,"lang":"en","type":"article","venue":"Cell chemical biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; University of Toronto; Toronto Metropolitan University; Lunenfeld-Tanenbaum Research Institute; University of Guelph; Ontario Institute for Cancer Research","funders":"National Institute of Allergy and Infectious Diseases; Canada Foundation for Innovation; RIKEN; Ontario Genomics; Canada Research Chairs; National Institutes of Health; Canadian Institute for Advanced Research; Japan Society for the Promotion of Science; Government of Ontario; National Institutes of Health, Pakistan; Canadian Institutes of Health Research; Genome Canada; Merck","keywords":"Candida albicans; Aspergillus fumigatus; Biosynthesis; Biology; Microbiology; Azole; Biochemistry; Enzyme; Antifungal","score_opus":0.015108529256481531,"score_gpt":0.26984063712747564,"score_spread":0.2547321078709941,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382051129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984134,0.000113933536,0.00011580505,0.00032892518,0.000057301146,0.00022580299,0.000035220834,0.000051644623,0.0006579671],"genre_scores_gemma":[0.9996164,0.00007399942,0.000055609467,0.000019665793,0.000063948086,0.000009210533,0.000034256933,0.00001264883,0.00011429987],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988105,0.000066673456,0.00038066288,0.00035332763,0.00015165623,0.00023713414],"domain_scores_gemma":[0.99902415,0.00021482418,0.00022995725,0.00035998173,0.00008701061,0.00008409504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030649334,0.00013872502,0.0004735807,0.000105210056,0.000024753479,0.0000026514856,0.00011248174,0.000240354,0.00006522001],"category_scores_gemma":[0.00035258188,0.00010259156,0.0001333438,0.00042470178,0.0004616857,0.000034064913,0.000052169344,0.00018294061,0.00004297138],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013189812,0.00020346545,0.08805489,0.00019930373,0.000035491386,0.000003746479,0.00005938365,1.4085929e-7,0.9082707,0.00007889802,0.00008673203,0.0016882526],"study_design_scores_gemma":[0.000661749,0.0002602174,0.051442146,0.00004108626,0.000056654793,0.0000032174542,0.00011537779,0.000012915889,0.946956,0.00032060695,0.00004089045,0.00008912738],"about_ca_topic_score_codex":0.000033375127,"about_ca_topic_score_gemma":0.0000071449813,"teacher_disagreement_score":0.038685292,"about_ca_system_score_codex":0.000041473,"about_ca_system_score_gemma":0.0000983442,"threshold_uncertainty_score":0.41835627},"labels":[],"label_agreement":null},{"id":"W4382983069","doi":"10.3390/jof9070720","title":"Candida auris in Dog Ears","year":2023,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"University Grants Commission; McMaster University; Canadian Institute for Advanced Research","keywords":"Candida auris; Biology; Otitis; Isolation (microbiology); Malassezia; Ear canal; Ear infection; Microbiology; Antifungal; Medicine; Audiology; Genetics","score_opus":0.01994968128831361,"score_gpt":0.3205811824620719,"score_spread":0.3006315011737583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382983069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99499595,0.0009684475,0.00001815002,0.0010893614,0.00019916588,0.000052398074,0.000001943972,0.000009994305,0.0026645875],"genre_scores_gemma":[0.99618644,0.0006411532,0.00014665646,0.00017062321,0.0001771103,4.1930534e-7,0.0000010367555,0.000006944414,0.002669592],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99916315,0.000023731323,0.00031212732,0.000068762354,0.00027125108,0.000160971],"domain_scores_gemma":[0.9995354,0.00007110977,0.00009299639,0.00011031005,0.00008708672,0.000103143415],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005488505,0.00005541639,0.00023298235,0.00018751645,0.000017769107,0.000007247422,0.000057570265,0.000048357357,0.00018382826],"category_scores_gemma":[0.00018576173,0.000041033567,0.00011282457,0.00036269028,0.000022735454,0.00006574838,0.000012471496,0.00024375052,0.00008941221],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033401963,0.00007474032,0.9455422,0.000061686085,0.00003500851,0.0013794495,0.00038871853,0.0000096133535,0.012419367,0.000039789873,0.028478,0.011237409],"study_design_scores_gemma":[0.000809749,0.00021660721,0.9883462,0.00016144132,0.000022880567,0.00006340986,0.0003531362,0.00004947638,0.00084254635,0.00021217734,0.008878357,0.000044001954],"about_ca_topic_score_codex":0.000030821775,"about_ca_topic_score_gemma":0.00007195107,"teacher_disagreement_score":0.042804018,"about_ca_system_score_codex":0.00007800934,"about_ca_system_score_gemma":0.00015991175,"threshold_uncertainty_score":0.20127906},"labels":[],"label_agreement":null},{"id":"W4383215700","doi":"10.1146/annurev-micro-032521-015858","title":"<i>Candida auris</i> Genetics and Emergence","year":2023,"lang":"en","type":"review","venue":"Annual Review of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":140,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Council of Scientific and Industrial Research, India; Hackensack Meridian Health; Canadian Institute for Advanced Research","keywords":"Candida auris; Fungal pathogen; Outbreak; Pathogen; Multiple drug resistance; Drug resistance; Antifungal drugs; Antifungal drug; Biology; Transmission (telecommunications); Amphotericin B; Medicine; Intensive care medicine; Antifungal; Microbiology; Virology","score_opus":0.040447906647362405,"score_gpt":0.3811493979539224,"score_spread":0.34070149130655997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383215700","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00002396748,0.9974782,0.0000050287904,0.000099896046,0.00018886117,0.0011130477,0.0007234816,0.000029054268,0.0003384855],"genre_scores_gemma":[0.0000028028282,0.99690443,0.00013300755,0.0005746258,0.000099664685,0.00003406472,0.00047164204,0.000043079785,0.0017366868],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976638,0.00022831281,0.0011577714,0.0005451342,0.00007989204,0.00032509674],"domain_scores_gemma":[0.9984049,0.00021000383,0.00047066715,0.0005832255,0.0002155862,0.00011557635],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00063309114,0.00037504997,0.003364078,0.00009169621,0.000034957862,0.0000021454846,0.00020521725,0.0003638353,0.00018977946],"category_scores_gemma":[0.0004214076,0.00026009858,0.00058015954,0.00036172973,0.000324672,0.000018376139,0.00018035538,0.0003650921,0.00021887141],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006624954,0.000031816602,0.000032799555,0.456035,0.00018286084,0.000024286115,0.000017034368,9.897424e-10,0.00006779753,0.00002405966,0.042486705,0.501091],"study_design_scores_gemma":[0.000075064134,0.00016346341,0.000012057911,0.14784698,0.0012604094,0.00016213952,0.000014863531,1.7783133e-8,0.000008438782,0.0000073094034,0.8502814,0.00016782002],"about_ca_topic_score_codex":0.000010323892,"about_ca_topic_score_gemma":0.000010809791,"teacher_disagreement_score":0.80779475,"about_ca_system_score_codex":0.000027739696,"about_ca_system_score_gemma":0.00041270332,"threshold_uncertainty_score":0.9999851},"labels":[],"label_agreement":null},{"id":"W4383268655","doi":"10.21769/bioprotoc.4713","title":"A Simple and Reproducible Stereomicroscopic Method to Assess Fungal Biofilms: Application to Antifungal Susceptibility Testing","year":2023,"lang":"en","type":"article","venue":"BIO-PROTOCOL","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada; University of Regina","keywords":"Biofilm; Candida albicans; Microbiology; Antifungal; Biology; Opportunistic pathogen; Corpus albicans; Pathogen; Antibiotics; Bacteria; Pseudomonas aeruginosa","score_opus":0.10222830289858267,"score_gpt":0.4336138552024485,"score_spread":0.3313855523038658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383268655","genre_codex":"empirical","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5345861,0.0000015719227,0.0092677735,0.00042650764,0.000039506947,0.45443088,0.00004981521,0.0004363072,0.00076160673],"genre_scores_gemma":[0.31343895,1.827932e-7,0.04645146,0.0006080212,0.0002818055,0.6381617,0.000028202327,0.000056916415,0.0009727257],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9966525,0.00018394925,0.0006990596,0.0014063207,0.00041805676,0.0006401159],"domain_scores_gemma":[0.99730796,0.00025436448,0.0001422353,0.0014658737,0.0003502162,0.00047935828],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0026760134,0.00031800094,0.0005483281,0.00025181563,0.00025866347,0.000105454375,0.00021108874,0.0001707759,0.000100211146],"category_scores_gemma":[0.0014198523,0.00028167912,0.00009282463,0.0017459051,0.0000822101,0.00012754338,0.00030414326,0.0002499945,0.00036759276],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000547368,0.00011273078,0.4650626,0.0005845727,0.000013352371,0.00001195876,0.00009388583,0.0000053794197,0.51343626,0.000021286156,0.002338853,0.01777175],"study_design_scores_gemma":[0.0013863208,0.0008719403,0.8167758,0.00015360011,0.000030705294,0.000016099099,0.00033803977,0.00045305738,0.15659148,0.00012270032,0.02292771,0.0003325277],"about_ca_topic_score_codex":0.00027513696,"about_ca_topic_score_gemma":0.00013708643,"teacher_disagreement_score":0.35684478,"about_ca_system_score_codex":0.0001596491,"about_ca_system_score_gemma":0.00024258153,"threshold_uncertainty_score":0.9999635},"labels":[],"label_agreement":null},{"id":"W4383872364","doi":"10.1128/mbio.01171-23","title":"Mrs4 loss of function in fungi during adaptation to the cystic fibrosis lung","year":2023,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institute of Environmental Health Sciences; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; Thayer School of Engineering, Dartmouth College; Dartmouth College; National Institute of General Medical Sciences; Canadian Institute for Advanced Research; National Institute of Allergy and Infectious Diseases; Cystic Fibrosis Foundation; National Cancer Institute; National Institutes of Health; National Science Foundation","keywords":"Cystic fibrosis; Lung function; Adaptation (eye); Function (biology); Lung; Microbiology; Biology; Computational biology; Medicine; Neuroscience; Evolutionary biology; Internal medicine; Genetics","score_opus":0.01780720891625437,"score_gpt":0.26814228079106445,"score_spread":0.2503350718748101,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383872364","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99783206,0.00013395427,0.00086267904,0.00053428876,0.000104162056,0.00022432886,0.0000058723517,0.000033119788,0.00026955106],"genre_scores_gemma":[0.9983322,0.000021194433,0.00007251782,0.00005916914,0.000054555847,0.00001251217,0.000013963975,0.0000067140245,0.0014271559],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994006,0.000024949692,0.00015738339,0.00013086994,0.00015829703,0.0001278719],"domain_scores_gemma":[0.9996562,0.000059053724,0.000026521635,0.00018458985,0.000041054976,0.000032583477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022942388,0.000051117455,0.00010967425,0.00007563352,0.000038564187,0.0000047350654,0.00003686169,0.000035283785,0.000053570668],"category_scores_gemma":[0.00014761466,0.000037234924,0.000041156985,0.00047171683,0.000018985294,0.000034989796,0.000019985691,0.000070189526,0.00010445143],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016775146,0.000080346974,0.8422489,0.00060518936,0.00003296484,0.000027329572,0.0031764803,0.001165899,0.14231323,0.00014713105,0.0018217291,0.006703282],"study_design_scores_gemma":[0.00029429232,0.00007707905,0.9935923,0.00012289597,0.000022017815,8.4481655e-7,0.00086034497,0.0015690867,0.0032012544,0.000041383155,0.0001811085,0.000037342626],"about_ca_topic_score_codex":0.00011582193,"about_ca_topic_score_gemma":0.00039744136,"teacher_disagreement_score":0.15134345,"about_ca_system_score_codex":0.0000555051,"about_ca_system_score_gemma":0.000026775559,"threshold_uncertainty_score":0.15183961},"labels":[],"label_agreement":null},{"id":"W4383906523","doi":"10.1099/acmi.0.000671.v1","title":"Radioimmunotherapy as a pathogen-agnostic treatment method for post-COVID-19 opportunistic fungal infections","year":2023,"lang":"en","type":"preprint","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"University of Saskatchewan","keywords":"Radioimmunotherapy; Immune system; Antigen; Mucormycosis; Immunology; Pandemic; Pathogen; Immunosuppression; Immunotherapy; Biology; Medicine; Antibody; Coronavirus disease 2019 (COVID-19); Monoclonal antibody; Internal medicine; Disease; Infectious disease (medical specialty); Pathology","score_opus":0.11104152431788544,"score_gpt":0.42536754263187704,"score_spread":0.3143260183139916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383906523","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07531794,0.0023476689,0.8718762,0.019369416,0.0030817993,0.014191671,0.005082384,0.0022568284,0.006476089],"genre_scores_gemma":[0.57845294,0.011903712,0.09289989,0.020806754,0.002257745,0.009363381,0.012808649,0.00077602756,0.2707309],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968336,0.00022203012,0.0007693466,0.0012081795,0.00038576868,0.00058105873],"domain_scores_gemma":[0.9950379,0.0022408362,0.00024344488,0.001429549,0.0003731396,0.00067509315],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00094727415,0.0006262138,0.0012030783,0.00033300623,0.00033483456,0.0000754549,0.00017833001,0.0005813365,0.0013408877],"category_scores_gemma":[0.0036956887,0.00049763755,0.0010618347,0.00021789766,0.00012431078,0.00003803649,0.00013408792,0.00047358594,0.00022149751],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03610179,0.026304666,0.25462624,0.028958043,0.02713664,0.009614865,0.016747773,0.0033403717,0.17333996,0.0580927,0.08795024,0.27778673],"study_design_scores_gemma":[0.039879814,0.04115419,0.17612359,0.0025242583,0.015874844,0.0018307084,0.0064664893,0.016981421,0.0031006604,0.08237569,0.6068406,0.0068477],"about_ca_topic_score_codex":0.004122287,"about_ca_topic_score_gemma":0.0013462849,"teacher_disagreement_score":0.7789763,"about_ca_system_score_codex":0.0013962034,"about_ca_system_score_gemma":0.004842976,"threshold_uncertainty_score":0.9997475},"labels":[],"label_agreement":null},{"id":"W4384120576","doi":"10.1093/mmy/myad069","title":"<i>In vitro</i> combination of antifungal drugs with tacrolimus (FK506) holds promise against clinical <i>Candida</i> species, including <i>Candida auris</i>","year":2023,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Tehran University of Medical Sciences and Health Services","keywords":"Anidulafungin; Caspofungin; Tacrolimus; Itraconazole; Fluconazole; Echinocandin; Calcineurin; Microbiology; Pharmacology; Candida parapsilosis; Candida glabrata; Candida auris; Candida albicans; Biology; Medicine; Chemistry; Antifungal; Internal medicine; Transplantation","score_opus":0.027043735941226665,"score_gpt":0.3341809677153878,"score_spread":0.30713723177416113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384120576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98400724,0.0001578021,0.00009067532,0.0055716727,0.0006388016,0.0008258765,0.00003781495,0.00013849865,0.008531597],"genre_scores_gemma":[0.99302346,0.0007609315,0.00015062488,0.0037805112,0.0003699732,0.000059854607,0.00015849699,0.000044737844,0.0016514207],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99547774,0.0004272108,0.0013040841,0.0007542991,0.001224136,0.00081253104],"domain_scores_gemma":[0.99729717,0.0011091576,0.00030843637,0.00054528884,0.0002150732,0.0005248489],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0031053934,0.00031469634,0.001312202,0.00032255615,0.00012546685,0.000013419128,0.00031828787,0.00061104493,0.00037537378],"category_scores_gemma":[0.0018114544,0.00024742814,0.00021894072,0.0012814259,0.001122283,0.00013101351,0.0002163921,0.0010737387,0.000090225105],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011472374,0.0030735391,0.83526886,0.00089863455,0.00026145994,0.0043278667,0.00096741633,0.0000052029072,0.0773657,0.0010493309,0.05495436,0.010355237],"study_design_scores_gemma":[0.032552138,0.00420314,0.87055296,0.0010704097,0.0003123359,0.00018557177,0.0013026211,0.0016969029,0.02950219,0.000720169,0.05701234,0.00088925415],"about_ca_topic_score_codex":0.00008540092,"about_ca_topic_score_gemma":0.00014538383,"teacher_disagreement_score":0.047863506,"about_ca_system_score_codex":0.00017763635,"about_ca_system_score_gemma":0.0010114379,"threshold_uncertainty_score":0.9999978},"labels":[],"label_agreement":null},{"id":"W4384447140","doi":"","title":"Invasive pulmonary aspergillosis- early diagnosis in febrile neutropenic patients using high resolution CT scan of thorax as a screening tool","year":2014,"lang":"en","type":"article","venue":"DOAJ (DOAJ: Directory of Open Access Journals)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba","funders":"","keywords":"Thorax (insect anatomy); Medicine; Aspergillosis; Radiology; Computed tomography; High resolution; Remote sensing; Immunology","score_opus":0.18174291456519817,"score_gpt":0.4938167540227353,"score_spread":0.3120738394575371,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384447140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939997,0.0028533847,0.00015254282,0.0000733339,0.00020328733,0.00094333856,0.000041108604,0.00001972573,0.0017135404],"genre_scores_gemma":[0.99618393,0.0027349736,0.0005251297,0.00021136466,0.00012327793,0.000040718,0.000031499836,0.00005875789,0.00009036],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99595016,0.0005639998,0.0013159756,0.0006227035,0.0010361535,0.00051099714],"domain_scores_gemma":[0.996892,0.0005449651,0.001016956,0.0006796197,0.00059928134,0.00026722153],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015989766,0.00035804985,0.001238796,0.0008059558,0.00021638714,0.00025148678,0.0010376482,0.00012819935,0.0019619027],"category_scores_gemma":[0.001671477,0.0003269113,0.00029948071,0.0011956032,0.00021880011,0.0019220791,0.0006291671,0.0005191443,0.0000100748075],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012749616,0.00060588407,0.9408878,0.0002046995,0.0001136485,0.000059959122,0.000083446495,0.00015475658,0.043881085,0.000035077468,0.00070995174,0.011988724],"study_design_scores_gemma":[0.0011812082,0.00009582255,0.9697667,0.0024192196,0.00016695705,0.000009591662,0.00007273792,0.00022692545,0.024928864,0.0006519573,0.00016550989,0.00031455167],"about_ca_topic_score_codex":0.009530207,"about_ca_topic_score_gemma":0.0003303419,"teacher_disagreement_score":0.028878849,"about_ca_system_score_codex":0.0003034351,"about_ca_system_score_gemma":0.0002765032,"threshold_uncertainty_score":0.9999183},"labels":[],"label_agreement":null},{"id":"W4384559034","doi":"10.1038/s44259-023-00007-2","title":"Molecular mechanisms governing antifungal drug resistance","year":2023,"lang":"en","type":"review","venue":"npj Antimicrobials and Resistance","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":265,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; National Institutes of Health; Government of Canada; Canadian Institute for Advanced Research; National Institute of Allergy and Infectious Diseases; Division of Intramural Research, National Institute of Allergy and Infectious Diseases","keywords":"Biology; Candida auris; Drug resistance; Antifungal drug; Antifungal drugs; Multiple drug resistance; Cryptococcus neoformans; Cryptococcus; Fluconazole; Aspergillus; Cryptococcosis; Antifungal; Microbiology","score_opus":0.03335770316327258,"score_gpt":0.3214349357411915,"score_spread":0.2880772325779189,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384559034","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023795602,0.98881155,0.00047116808,0.0003070913,0.00045278165,0.0016456235,0.0005025875,0.00035644555,0.0072147734],"genre_scores_gemma":[0.0002137451,0.9187466,0.0033754248,0.0002529836,0.0001963999,0.00005761278,0.00026671382,0.0002733007,0.07661722],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99451286,0.0003392657,0.0015566264,0.0018031771,0.0007435136,0.0010445652],"domain_scores_gemma":[0.9968794,0.00034840382,0.00083434035,0.001312605,0.0002356593,0.00038957907],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001167914,0.001095672,0.004050744,0.00029499072,0.00046096806,0.0001976528,0.00044369567,0.0007350921,0.00009972522],"category_scores_gemma":[0.00040344536,0.0009107112,0.0011187162,0.0009604975,0.00040786114,0.00014363705,0.0002568231,0.001093995,0.00034641588],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011937366,0.0009278964,0.00007408093,0.5877975,0.0032114666,0.007897005,0.00037686792,7.513361e-7,0.011579432,0.03923878,0.26939493,0.078307524],"study_design_scores_gemma":[0.0005537046,0.000026462483,0.00005085933,0.059719417,0.0015526463,0.000051371197,0.00004175972,8.081878e-7,0.0002903528,0.00048641255,0.9362838,0.00094235566],"about_ca_topic_score_codex":0.000015751479,"about_ca_topic_score_gemma":0.0003080991,"teacher_disagreement_score":0.6668889,"about_ca_system_score_codex":0.00025866277,"about_ca_system_score_gemma":0.0007248322,"threshold_uncertainty_score":0.99933434},"labels":[],"label_agreement":null},{"id":"W4385220719","doi":"10.1101/2023.07.21.550109","title":"Genomic epidemiology of European <i>Aspergillus fumigatus</i> causing COVID-19-associated pulmonary aspergillosis in Europe","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Pfizer Healthcare Ireland; Wellcome Trust; Medical Research Council; Canadian Institute for Advanced Research; Natural Environment Research Council; Gilead Sciences; Pfizer","keywords":"Aspergillus fumigatus; Biology; Population; Genotype; Microbiology; Aspergillosis; Virology; Molecular epidemiology; Genetics; Immunology; Gene; Medicine","score_opus":0.05450225002199209,"score_gpt":0.2869395785922238,"score_spread":0.2324373285702317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385220719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926276,0.0028529414,0.00026941646,0.0011244301,0.0008633386,0.0010477051,0.0005196982,0.00057141465,0.00012340864],"genre_scores_gemma":[0.99482036,0.002171489,0.00073738967,0.0015192673,0.00032611517,0.000046946392,0.000007750685,0.00031277374,0.000057936337],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99296457,0.001684175,0.0019484727,0.0018298238,0.00046926603,0.0011037115],"domain_scores_gemma":[0.9946864,0.0006897243,0.0010552143,0.0019983747,0.00077921903,0.0007910727],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.005199516,0.0008021308,0.0021010253,0.0006420013,0.00017239894,0.000024185325,0.0005307713,0.00077232346,0.00007265195],"category_scores_gemma":[0.012180533,0.0008388478,0.00040689443,0.0016681592,0.0005045651,0.00009032866,0.0009799853,0.0017062739,0.00014327813],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023921572,0.00035211575,0.7101016,0.0012552689,0.00024946325,0.0016937732,0.00002354234,0.00028796287,0.28525126,0.00017442375,0.00036966393,0.0000017149292],"study_design_scores_gemma":[0.000896494,0.0001061022,0.9904681,0.0011585843,0.0002718845,1.5532044e-7,0.000011928083,0.0004968765,0.0044546933,0.000006540371,0.0014359655,0.00069267995],"about_ca_topic_score_codex":0.00075968157,"about_ca_topic_score_gemma":0.000095794705,"teacher_disagreement_score":0.2807966,"about_ca_system_score_codex":0.0013700614,"about_ca_system_score_gemma":0.0021622344,"threshold_uncertainty_score":0.9994062},"labels":[],"label_agreement":null},{"id":"W4385304583","doi":"10.1038/s41467-023-40209-w","title":"Multifactor transcriptional control of alternative oxidase induction integrates diverse environmental inputs to enable fungal virulence","year":2023,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; U.S. Department of Health and Human Services; National Institutes of Health; Government of Canada; Canadian Institute for Advanced Research; University of Toronto","keywords":"Candida albicans; Biology; Virulence; Transcription factor; Transcriptional regulation; Gene; Oxidase test; Corpus albicans; Genetics; Cell biology; Alternative oxidase; Microbiology; Enzyme; Biochemistry","score_opus":0.03309198914940343,"score_gpt":0.31594439511299516,"score_spread":0.28285240596359174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385304583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99360955,0.0006902636,0.0004303715,0.0036899026,0.00014964999,0.0005037007,0.0004946297,0.00006347955,0.00036845295],"genre_scores_gemma":[0.99723506,0.00039445466,0.0010245348,0.00045624338,0.000044602053,0.00004241183,0.00025584202,0.0000108354625,0.0005360389],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990274,0.000099280616,0.00023401709,0.00020147409,0.00028180247,0.00015606119],"domain_scores_gemma":[0.99875396,0.00020163943,0.000071862785,0.0007538914,0.00010794345,0.00011069757],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022009779,0.00011614601,0.00020155613,0.00014633192,0.0001619409,0.000008642243,0.00032942474,0.00016011436,0.00011991817],"category_scores_gemma":[0.0002653995,0.00010180887,0.000105932,0.00032351786,0.00021393498,0.00014222054,0.000085864485,0.0006521371,0.00011261165],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043368462,0.00053889706,0.13112085,0.0000305751,0.000117658674,0.000005508312,0.0016204447,0.000041791212,0.8598167,0.002483155,0.0011615212,0.0026292265],"study_design_scores_gemma":[0.0017575701,0.00026064875,0.92518544,0.00014715861,0.00012330139,0.0000070698347,0.0020698118,0.0018067006,0.050191116,0.00024367843,0.017995311,0.00021217062],"about_ca_topic_score_codex":0.000050665516,"about_ca_topic_score_gemma":0.00017973203,"teacher_disagreement_score":0.80962557,"about_ca_system_score_codex":0.00013202909,"about_ca_system_score_gemma":0.00005809267,"threshold_uncertainty_score":0.41516453},"labels":[],"label_agreement":null},{"id":"W4385633259","doi":"10.1101/2023.08.01.23293435","title":"Discovery of the sixth <i>Candida auris</i> clade in Singapore","year":2023,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Medical Research Council; Duke-NUS Medical School; Medical Research Council; Genome Institute of Singapore; University of British Columbia; Singapore General Hospital","keywords":"Clade; Biology; Candida auris; Genetics; Genome; Phylogenetic tree; Multilocus sequence typing; Context (archaeology); Evolutionary biology; Gene; Genotype; Microbiology","score_opus":0.037163379056844505,"score_gpt":0.30013449455522007,"score_spread":0.26297111549837554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385633259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943772,0.00038712853,0.00006550028,0.0019267322,0.0007070184,0.00055088574,0.00007068328,0.00004586169,0.0018689733],"genre_scores_gemma":[0.99153346,0.00022671667,0.000044569693,0.0002163079,0.00015410875,0.000023854376,0.000033756696,0.000038216116,0.0077290353],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980551,0.00011906622,0.0005492579,0.0004989705,0.00049647765,0.00028113916],"domain_scores_gemma":[0.9983388,0.00014495572,0.00021698081,0.0011778873,0.00006681727,0.00005451363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048072985,0.00023151512,0.0006366383,0.00009811022,0.000037804766,0.000019249912,0.00033839987,0.00028610375,0.000022951654],"category_scores_gemma":[0.0005842367,0.0001487571,0.00034231218,0.00031389476,0.00023819493,0.000041787716,0.0005147579,0.0010098091,0.00001717746],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015282734,0.00011964612,0.9883381,0.0008662186,0.000041765314,0.000055637167,0.0003598861,0.000026682741,0.008560247,0.000094157156,0.0012383446,0.00014649365],"study_design_scores_gemma":[0.0003721634,0.00003271201,0.98896545,0.0012839508,0.000073781106,0.000001895528,0.00018185949,0.00004623439,0.0065647303,0.0018623736,0.0004812368,0.0001335912],"about_ca_topic_score_codex":0.000403757,"about_ca_topic_score_gemma":0.0012730357,"teacher_disagreement_score":0.005860062,"about_ca_system_score_codex":0.00012258248,"about_ca_system_score_gemma":0.00048044728,"threshold_uncertainty_score":0.6066139},"labels":[],"label_agreement":null},{"id":"W4385684926","doi":"10.1002/cpz1.853","title":"Identification and Quantification of Monosaccharides from Fungal Cell Walls and Exopolysaccharides by Gas Chromatography Coupled to Mass Spectrometry","year":2023,"lang":"en","type":"article","venue":"Current Protocols","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; GLS Industries (Canada); Institute of Infection and Immunity; Université de Montréal; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Monosaccharide; Mass spectrometry; Gas chromatography; Polysaccharide; Gas chromatography–mass spectrometry; Cell wall; Chemistry; Trimethylsilyl; Chromatography; Extraction (chemistry); Biochemistry; Organic chemistry","score_opus":0.03340991613512862,"score_gpt":0.3338079456948323,"score_spread":0.3003980295597037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385684926","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9678445,0.0006386605,0.004238915,0.00023093764,0.00006481716,0.026717098,0.00014240421,0.00009975255,0.000022914663],"genre_scores_gemma":[0.9872393,0.0002767702,0.00040974305,0.000016491424,0.000052641866,0.011759332,0.00010128521,0.000021178586,0.00012323323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99824274,0.000049485625,0.00053718354,0.00055755116,0.00036146113,0.00025160075],"domain_scores_gemma":[0.9988833,0.0001203659,0.00021282551,0.0004487492,0.00014001137,0.00019475381],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046685903,0.00019055346,0.00038976074,0.00026986538,0.000092271366,0.00007380484,0.000117814576,0.000083144056,0.00007398936],"category_scores_gemma":[0.00015602146,0.00017518541,0.000076607954,0.00067363423,0.00013036118,0.0001689917,0.000051029067,0.00015082669,0.000051078183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019415433,0.00015283897,0.18455565,0.00060933747,0.000020338275,0.0000013848054,0.00016841256,3.2630842e-7,0.8095497,0.00007601613,0.0019100556,0.0027617884],"study_design_scores_gemma":[0.00091038074,0.00019576373,0.38516048,0.0004404989,0.00006383872,0.0000010114671,0.00029159736,0.0007903557,0.61044186,0.000974252,0.0005288924,0.00020104421],"about_ca_topic_score_codex":0.00004737203,"about_ca_topic_score_gemma":0.000007159532,"teacher_disagreement_score":0.20060483,"about_ca_system_score_codex":0.00003155736,"about_ca_system_score_gemma":0.00005111711,"threshold_uncertainty_score":0.7143854},"labels":[],"label_agreement":null},{"id":"W4385797857","doi":"10.1128/msphere.00314-23","title":"Use of a human small airway epithelial cell line to study the interactions of <i>Aspergillus fumigatus</i> with pulmonary epithelial cells","year":2023,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Aspergillus fumigatus; A549 cell; Cell biology; Endocytosis; Biology; Cell culture; Microbiology; Cell; Immunology; Biochemistry","score_opus":0.047129502927577734,"score_gpt":0.29149014488269104,"score_spread":0.2443606419551133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385797857","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965255,0.000040059247,0.00008294167,0.00031963445,0.00013678998,0.0010010811,0.00014229544,0.00006018473,0.0016914838],"genre_scores_gemma":[0.9882174,0.00002385106,0.0002853246,0.00014384459,0.00013200169,0.00003265317,0.000016965909,0.000037095277,0.011110827],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984411,0.000116543095,0.00046100165,0.00034593948,0.00035941965,0.000276013],"domain_scores_gemma":[0.99854314,0.0002094535,0.00014516637,0.0007304727,0.00024268751,0.00012907041],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029159107,0.00020042306,0.0004403527,0.000060916856,0.00013380511,0.000012951735,0.00018997196,0.00005978704,0.0004382764],"category_scores_gemma":[0.000059611626,0.00012352245,0.00015201463,0.00060432864,0.00014663866,0.000065840606,0.00011305741,0.00028750434,0.00009170616],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00192154,0.001974964,0.043532684,0.0001848261,0.0001610301,0.00014792776,0.0028621065,0.00025757455,0.9425846,0.000017815011,0.0009497133,0.0054052593],"study_design_scores_gemma":[0.0022712022,0.0055331495,0.2722676,0.00029272246,0.00052377465,0.000012918895,0.013339775,0.00020651188,0.69831204,0.000047722497,0.0068237153,0.00036884425],"about_ca_topic_score_codex":0.00072336756,"about_ca_topic_score_gemma":0.002692206,"teacher_disagreement_score":0.24427252,"about_ca_system_score_codex":0.00003553862,"about_ca_system_score_gemma":0.00009305378,"threshold_uncertainty_score":0.5037099},"labels":[],"label_agreement":null},{"id":"W4385806775","doi":"10.1099/acmi.0.000671.v1.5","title":"Editor response for version 1","year":2023,"lang":"en","type":"peer-review","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Saskatchewan","keywords":"Immune system; Antigen; Mucormycosis; Immunosuppression; Immunology; Radioimmunotherapy; Pandemic; Medicine; Immunotherapy; Pathogen; Antibody; Biology; Coronavirus disease 2019 (COVID-19); Monoclonal antibody; Internal medicine; Disease; Pathology; Infectious disease (medical specialty)","score_opus":0.045889687544189886,"score_gpt":0.37668009947297126,"score_spread":0.3307904119287814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385806775","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00064644864,0.052341964,0.00079653756,0.77693367,0.120643094,0.00912585,0.0043488005,0.0011790183,0.03398461],"genre_scores_gemma":[0.000033791686,0.0054696705,0.00037366056,0.0048701745,0.00963749,0.00008533202,0.0017983513,0.00005127939,0.97768027],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984302,0.00005774043,0.00031719526,0.00044163602,0.0004905598,0.0002626604],"domain_scores_gemma":[0.99794906,0.0007743548,0.000082811406,0.0006105789,0.0004446942,0.00013847803],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0013367169,0.00020811195,0.0006932515,0.000085826636,0.00006381097,0.000007921339,0.00011465307,0.00032934963,0.0018952012],"category_scores_gemma":[0.0043673688,0.0001532488,0.0004439661,0.00016381487,0.00004747778,0.000022890461,0.000050651135,0.00028249386,0.0014891253],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024273857,0.000034173485,0.00003305013,0.008582617,0.000042469164,0.000014297879,0.00000401772,9.10495e-9,0.00008947108,0.000004371505,0.9877685,0.0009996812],"study_design_scores_gemma":[0.0005093601,0.00035184942,0.0008166456,0.0054058726,0.00031842443,0.0000015373365,0.000022822383,0.00000451984,0.000042603722,0.000021867523,0.9923555,0.0001489604],"about_ca_topic_score_codex":0.00002663669,"about_ca_topic_score_gemma":0.000056618446,"teacher_disagreement_score":0.94369566,"about_ca_system_score_codex":0.00015403482,"about_ca_system_score_gemma":0.00057436683,"threshold_uncertainty_score":0.9992883},"labels":[],"label_agreement":null},{"id":"W4385810506","doi":"10.1099/acmi.0.000671.v1.3","title":"Reviewer response for version 1","year":2023,"lang":"en","type":"peer-review","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Saskatchewan","keywords":"Immune system; Antigen; Immunosuppression; Mucormycosis; Radioimmunotherapy; Immunology; Pandemic; Immunotherapy; Pathogen; Medicine; Antibody; Biology; Coronavirus disease 2019 (COVID-19); Monoclonal antibody; Internal medicine; Disease; Infectious disease (medical specialty); Pathology","score_opus":0.07402633028773563,"score_gpt":0.3936220086542715,"score_spread":0.31959567836653585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385810506","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002644958,0.42007044,0.0005779504,0.5074046,0.017250076,0.011163177,0.0020629745,0.0007749253,0.040431324],"genre_scores_gemma":[0.000012439658,0.07399116,0.00039337543,0.011609502,0.00064054516,0.00011261936,0.0016106513,0.00005342584,0.9115763],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981748,0.00010168813,0.0004564041,0.00051017874,0.0004775461,0.00027939392],"domain_scores_gemma":[0.9966762,0.0006485432,0.00011998109,0.0008460865,0.0015655723,0.00014362166],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0023968362,0.00024759307,0.0010346787,0.00008399238,0.00006277809,0.000007547666,0.00012654695,0.00028322282,0.0033234542],"category_scores_gemma":[0.018523548,0.0001745544,0.0006470499,0.00023253188,0.00004775313,0.00002413061,0.00005739675,0.00029958916,0.00232933],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009386381,0.00003015015,0.000031464166,0.024985546,0.000044690194,0.000014916081,0.0000029618013,5.1145825e-9,0.000028542387,0.0000059782888,0.9687124,0.005204728],"study_design_scores_gemma":[0.00041430077,0.00026703926,0.0008039589,0.019674795,0.00052859145,0.0000018589923,0.000009611043,0.000002218122,0.000020045998,0.000022134003,0.97808635,0.00016906629],"about_ca_topic_score_codex":0.00001805898,"about_ca_topic_score_gemma":0.0000435081,"teacher_disagreement_score":0.87114495,"about_ca_system_score_codex":0.00014868386,"about_ca_system_score_gemma":0.00048185614,"threshold_uncertainty_score":0.9984475},"labels":[],"label_agreement":null},{"id":"W4385814571","doi":"10.1099/acmi.0.000671.v1.4","title":"Reviewer response for version 1","year":2023,"lang":"en","type":"peer-review","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"University of Saskatchewan","keywords":"Immune system; Antigen; Mucormycosis; Immunology; Immunosuppression; Radioimmunotherapy; Pandemic; Immunotherapy; Pathogen; Medicine; Antibody; Biology; Coronavirus disease 2019 (COVID-19); Monoclonal antibody; Internal medicine; Disease; Pathology; Infectious disease (medical specialty)","score_opus":0.07402633028773563,"score_gpt":0.3936220086542715,"score_spread":0.31959567836653585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385814571","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002644958,0.42007044,0.0005779504,0.5074046,0.017250076,0.011163177,0.0020629745,0.0007749253,0.040431324],"genre_scores_gemma":[0.000012439658,0.07399116,0.00039337543,0.011609502,0.00064054516,0.00011261936,0.0016106513,0.00005342584,0.9115763],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981748,0.00010168813,0.0004564041,0.00051017874,0.0004775461,0.00027939392],"domain_scores_gemma":[0.9966762,0.0006485432,0.00011998109,0.0008460865,0.0015655723,0.00014362166],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0023968362,0.00024759307,0.0010346787,0.00008399238,0.00006277809,0.000007547666,0.00012654695,0.00028322282,0.0033234542],"category_scores_gemma":[0.018523548,0.0001745544,0.0006470499,0.00023253188,0.00004775313,0.00002413061,0.00005739675,0.00029958916,0.00232933],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009386381,0.00003015015,0.000031464166,0.024985546,0.000044690194,0.000014916081,0.0000029618013,5.1145825e-9,0.000028542387,0.0000059782888,0.9687124,0.005204728],"study_design_scores_gemma":[0.00041430077,0.00026703926,0.0008039589,0.019674795,0.00052859145,0.0000018589923,0.000009611043,0.000002218122,0.000020045998,0.000022134003,0.97808635,0.00016906629],"about_ca_topic_score_codex":0.00001805898,"about_ca_topic_score_gemma":0.0000435081,"teacher_disagreement_score":0.87114495,"about_ca_system_score_codex":0.00014868386,"about_ca_system_score_gemma":0.00048185614,"threshold_uncertainty_score":0.9984475},"labels":[],"label_agreement":null},{"id":"W4385898020","doi":"10.1093/jpids/piad057","title":"Adjunctive Diagnostic Studies Completed Following Detection of Candidemia in Children: Secondary Analysis of Observed Practice From a Multicenter Cohort Study Conducted by the Pediatric Fungal Network","year":2023,"lang":"en","type":"article","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases","keywords":"Medicine; Pediatrics; Cohort; Cohort study; Multicenter study; Clinical Practice; Intensive care medicine; Family medicine; Internal medicine; Randomized controlled trial","score_opus":0.01655961327043876,"score_gpt":0.2920165806440469,"score_spread":0.27545696737360814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385898020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98965186,0.00831776,0.000033055374,0.000074313364,0.000562174,0.0011269125,0.00020351176,0.000025561734,0.000004870271],"genre_scores_gemma":[0.996483,0.002752283,0.000010472324,0.00014052982,0.0005288477,0.000026188813,0.000029781813,0.000020413501,0.000008484632],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965206,0.0008657948,0.0011762495,0.00028898736,0.00083930005,0.00030907724],"domain_scores_gemma":[0.99184746,0.0053079054,0.0015893438,0.00039504684,0.00074981345,0.000110428526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015892091,0.00024313612,0.0011106533,0.00018629644,0.00026686996,0.00001745841,0.00021582737,0.000109185174,0.00001641619],"category_scores_gemma":[0.0064254566,0.00015015577,0.0014501008,0.004333799,0.000120899225,0.0002150538,0.00014005558,0.00073649123,8.102452e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003947904,0.00094711763,0.98377675,0.00007091991,0.009863861,0.000013968288,0.0014753393,0.0016759693,0.00011743448,1.5589734e-7,0.0016110579,0.00005262147],"study_design_scores_gemma":[0.0032388188,0.0003604165,0.95352054,0.000028903029,0.037050486,0.000010221425,0.0051399777,0.00050560385,0.000007311728,0.000017101036,0.0000016879353,0.00011891295],"about_ca_topic_score_codex":0.0010415567,"about_ca_topic_score_gemma":0.00050531916,"teacher_disagreement_score":0.030256206,"about_ca_system_score_codex":0.00036885845,"about_ca_system_score_gemma":0.00037003172,"threshold_uncertainty_score":0.7692336},"labels":[],"label_agreement":null},{"id":"W4386055832","doi":"10.1021/acsinfecdis.3c00113","title":"Potent Antifungal Activity of Penta-<i>O</i>-galloyl-β-<scp>d</scp>-Glucose against Drug-Resistant <i>Candida albicans</i>, <i>Candida auris</i>, and Other Non-<i>albicans Candida</i> Species","year":2023,"lang":"en","type":"article","venue":"ACS Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University; University of Toronto","funders":"National Center for Complementary and Integrative Health; Canadian Institutes of Health Research; National Institutes of Health; Canadian Institute for Advanced Research","keywords":"Candida albicans; Candida auris; Microbiology; Corpus albicans; Biology; Antifungal drug; Cytotoxicity; Multiple drug resistance; Minimum inhibitory concentration; Drug resistance; In vitro; Antimicrobial; Antifungal; Biochemistry","score_opus":0.010515481158689222,"score_gpt":0.24992303485163386,"score_spread":0.23940755369294464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386055832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9806574,0.0016971751,0.00006009081,0.00026551387,0.000465258,0.0012850763,0.0015374114,0.00050660514,0.01352547],"genre_scores_gemma":[0.9902659,0.0026109081,0.000018693347,0.0012479057,0.00039720803,0.00012426103,0.00016230618,0.00014667168,0.005026117],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9952169,0.00025050543,0.0008799302,0.0012415244,0.001197415,0.0012137074],"domain_scores_gemma":[0.9961289,0.0009468472,0.00048296075,0.0012009618,0.0003397903,0.00090053474],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00053379347,0.0008110575,0.0014249777,0.0004619413,0.000568148,0.00014411563,0.0003338675,0.000246542,0.00014251197],"category_scores_gemma":[0.0008987702,0.00072201324,0.00057359925,0.001278624,0.0010402886,0.0003491983,0.00030898274,0.0005727645,0.000083618994],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006570841,0.001301532,0.85119116,0.0008722713,0.000574925,0.00029410425,0.0006888576,0.00003183382,0.11249741,0.00012984229,0.030282728,0.0014782414],"study_design_scores_gemma":[0.003938783,0.0006715714,0.9259059,0.0004926669,0.0009628181,0.000031812637,0.001252735,0.000086924854,0.040500443,0.00022948266,0.02542344,0.0005034104],"about_ca_topic_score_codex":0.0023143222,"about_ca_topic_score_gemma":0.003035446,"teacher_disagreement_score":0.07471475,"about_ca_system_score_codex":0.00033906748,"about_ca_system_score_gemma":0.00073254394,"threshold_uncertainty_score":0.9995231},"labels":[],"label_agreement":null},{"id":"W4386282971","doi":"10.1038/s41579-023-00960-9","title":"The rapid emergence of antifungal-resistant human-pathogenic fungi","year":2023,"lang":"en","type":"review","venue":"Nature Reviews Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":289,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Canadian Institute for Advanced Research","keywords":"Aspergillus fumigatus; Candida auris; Fungicide; Biology; Azole; Fluconazole; Posaconazole; Aspergillus; Drug resistance; Antifungal; Microbiology; Biotechnology; Itraconazole","score_opus":0.07432347359352429,"score_gpt":0.40528744816070855,"score_spread":0.3309639745671843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386282971","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000022337159,0.9943276,0.0000032313148,0.000048991267,0.0010212654,0.003197562,0.00039923433,0.00007432619,0.0009054478],"genre_scores_gemma":[0.00006144925,0.99391663,0.000099342025,0.00011499607,0.00036401395,0.00014610981,0.00079601444,0.00010749711,0.004393953],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99396735,0.0012216101,0.0027355345,0.0010925609,0.00018958835,0.00079335226],"domain_scores_gemma":[0.99512744,0.00073221826,0.0016239521,0.0020684653,0.00029797203,0.00014996977],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.003126783,0.0008488332,0.0056591216,0.00022686424,0.00031831666,0.00001614353,0.0009336607,0.0020276567,0.0005519108],"category_scores_gemma":[0.0009975582,0.00045008416,0.0029407507,0.0011970598,0.0005733713,0.00003121223,0.00025916877,0.0028210813,0.00067619525],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007071997,0.00010496952,0.000027626636,0.07943011,0.00067476125,0.00006081668,0.000015072353,5.308869e-9,0.024171159,0.0007313859,0.06648017,0.8282332],"study_design_scores_gemma":[0.00016323898,0.00020954889,0.00005447681,0.022347832,0.001998021,0.00012016263,0.000013015659,4.1277072e-8,0.000046104164,0.000026052614,0.9746612,0.0003603401],"about_ca_topic_score_codex":0.000005138833,"about_ca_topic_score_gemma":0.0000718699,"teacher_disagreement_score":0.908181,"about_ca_system_score_codex":0.000116880445,"about_ca_system_score_gemma":0.0005617515,"threshold_uncertainty_score":0.9997951},"labels":[],"label_agreement":null},{"id":"W4386324105","doi":"10.1371/journal.ppat.1011583","title":"Azole potentiation in Candida species","year":2023,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institut National de la Santé et de la Recherche Médicale; Canadian Institute for Advanced Research","keywords":"Potentiator; Azole; Candida albicans; Antifungal; Candida auris; Biology; Echinocandin; Drug resistance; Drug; Pharmacology; Microbiology; Fluconazole","score_opus":0.03798706915198806,"score_gpt":0.2706786126069845,"score_spread":0.23269154345499643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386324105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930844,0.00005579262,0.000023250832,0.0006091975,0.000059736107,0.0001681652,0.000025023017,0.00008986722,0.005884581],"genre_scores_gemma":[0.9938651,0.000104519,0.00006329815,0.0001335822,0.000081607075,0.000009873069,0.00006928472,0.000010100308,0.00566267],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999258,0.000020380603,0.0001481433,0.00017122897,0.00020455456,0.0001977353],"domain_scores_gemma":[0.99966335,0.000027996855,0.000022753724,0.0001872659,0.00004188089,0.0000567288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013812247,0.00006644255,0.0001491762,0.0001076606,0.000037155307,0.0000075736148,0.000033835753,0.0000480048,0.00021631886],"category_scores_gemma":[0.0001623643,0.000058648387,0.00005389013,0.00038104306,0.00002580703,0.000039357514,0.000019386907,0.00008806483,0.0003983935],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004591243,0.00007840995,0.7867518,0.000057994006,0.000010902869,0.00015483814,0.00029722264,0.0000046032633,0.2109271,0.000104882296,0.0010009536,0.0005653591],"study_design_scores_gemma":[0.00032255283,0.000038014197,0.9914208,0.0000479001,0.000020963049,0.0000016162396,0.00037530495,0.00046264564,0.006390717,0.00012710382,0.0007314829,0.000060919392],"about_ca_topic_score_codex":0.000022655464,"about_ca_topic_score_gemma":0.00025648205,"teacher_disagreement_score":0.20466895,"about_ca_system_score_codex":0.0000616735,"about_ca_system_score_gemma":0.000049740345,"threshold_uncertainty_score":0.5120675},"labels":[],"label_agreement":null},{"id":"W4386347938","doi":"10.1128/mra.00188-23","title":"Complete genome sequences of agricultural azole-resistant <i>Penicillium rubens</i> encoding CYP51A and ERG11 paralogues","year":2023,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Canadian Institute for Public Safety Research and Treatment; Université Laval","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Azole; Penicillium; Biology; Genome; Gene; Microbiology; Genetics; Antifungal","score_opus":0.028922908254895633,"score_gpt":0.25957194883118484,"score_spread":0.2306490405762892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386347938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948731,0.0013727528,0.000009309939,0.00051196653,0.000082072685,0.000362805,0.0015612942,0.00008598273,0.0011406863],"genre_scores_gemma":[0.99355894,0.00030966027,0.00014436137,0.0004655045,0.000077749064,0.000013752977,0.0038083796,0.000014229113,0.0016074487],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981698,0.00011111985,0.00052316,0.00050931476,0.00014933464,0.0005372621],"domain_scores_gemma":[0.99915725,0.00009561919,0.00018569367,0.00030912284,0.00014179124,0.00011050698],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041874946,0.00025292172,0.00058815023,0.00011621478,0.00020408531,0.000017219014,0.00018009398,0.00016029322,0.00005357696],"category_scores_gemma":[0.00005226556,0.00018572112,0.000127011,0.00033834457,0.0005626496,0.00006562161,0.00015531901,0.00020069929,0.00008103827],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027217233,0.000052775355,0.053820524,0.00014270945,0.00010407487,0.000028430311,0.00048407124,0.000013703272,0.94283026,0.000036931597,0.002166389,0.000047945876],"study_design_scores_gemma":[0.0038907074,0.0020918113,0.5887588,0.0005822436,0.00036732006,0.00022490053,0.009675095,0.00002724952,0.022349317,0.0001044491,0.3709865,0.0009415999],"about_ca_topic_score_codex":0.000059317288,"about_ca_topic_score_gemma":0.000051458734,"teacher_disagreement_score":0.92048097,"about_ca_system_score_codex":0.000069876354,"about_ca_system_score_gemma":0.00005205805,"threshold_uncertainty_score":0.7573488},"labels":[],"label_agreement":null},{"id":"W4386471934","doi":"10.1101/2023.09.05.556458","title":"Evolutionary diversity of the control of the azole response by Tra1 across yeast species","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Azole; Candida albicans; ATP-binding cassette transporter; Caspofungin; Genetics; Fluconazole; Microbiology; Gene; Transporter; Antifungal","score_opus":0.020641373357850847,"score_gpt":0.2387046036789696,"score_spread":0.21806323032111874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386471934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99317575,0.0006926295,0.00016326047,0.0012745479,0.00072141434,0.00082397414,0.0030648527,0.00007568662,0.000007862431],"genre_scores_gemma":[0.99931955,0.000079793455,0.000058007943,0.00015324273,0.000094008436,0.000018953577,2.2865734e-7,0.000039280654,0.00023691566],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975666,0.00033187997,0.000491268,0.00051492255,0.00073887856,0.00035647297],"domain_scores_gemma":[0.99694014,0.0001899096,0.00047435908,0.0017042196,0.00057950296,0.00011186458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011576201,0.00028784908,0.00061024784,0.00005034819,0.00032920003,0.00001695928,0.00072260405,0.00034154527,0.000038613507],"category_scores_gemma":[0.0011352838,0.00019644336,0.00044644438,0.00048041964,0.0008059044,0.000050376253,0.0012342064,0.0006643631,0.000012358794],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009874586,0.00014860962,0.46582347,0.00031709665,0.00014731639,0.000006103939,0.00004540839,0.000013472093,0.52968264,0.00005936182,0.0027688104,2.4020426e-7],"study_design_scores_gemma":[0.00071584876,0.000038185488,0.89124393,0.00046068133,0.00014789905,8.843641e-9,0.00004108957,0.000040550218,0.105701275,0.0000019440895,0.0014540929,0.00015446811],"about_ca_topic_score_codex":0.00011767269,"about_ca_topic_score_gemma":0.000013943412,"teacher_disagreement_score":0.4254205,"about_ca_system_score_codex":0.00027268374,"about_ca_system_score_gemma":0.0007548254,"threshold_uncertainty_score":0.8010728},"labels":[],"label_agreement":null},{"id":"W4386496266","doi":"10.1371/journal.ppat.1011613","title":"Lodderomyces elongisporus: An emerging human fungal pathogen","year":2023,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"McMaster University","keywords":"Fungal pathogen; Human pathogen; Pathogen; Biology; Microbiology; Genetics; Bacteria","score_opus":0.07336652107977026,"score_gpt":0.3449987802746907,"score_spread":0.27163225919492046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386496266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943452,0.00017163016,0.000031554784,0.00029076976,0.0001108623,0.00037885795,0.0001236001,0.00063519867,0.0039123576],"genre_scores_gemma":[0.995734,0.00008110122,0.00036922694,0.00025069393,0.00039826546,0.000033876593,0.00036987313,0.000063276515,0.0026997204],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977035,0.000087389584,0.00039878936,0.0006227717,0.00056395185,0.00062362815],"domain_scores_gemma":[0.99859977,0.000049736693,0.00008524521,0.0007688938,0.00015352189,0.00034282374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046500453,0.00025425517,0.00043419935,0.00020059524,0.00033377536,0.00003506451,0.0001739953,0.00014759401,0.00061654625],"category_scores_gemma":[0.00017084708,0.00022764462,0.00020253661,0.0005961702,0.00010344774,0.00017514963,0.00007347843,0.0002594872,0.0006896802],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065029475,0.0002588705,0.4187385,0.00013105056,0.00006537689,0.00083401223,0.00074915803,0.0000030075473,0.5760445,0.00025456646,0.0007523549,0.002103588],"study_design_scores_gemma":[0.000875605,0.000542269,0.97805357,0.00016384541,0.00024867433,0.000031465515,0.002475362,0.0005999933,0.014200104,0.0004986688,0.0018635776,0.00044686903],"about_ca_topic_score_codex":0.000017432827,"about_ca_topic_score_gemma":0.00008495964,"teacher_disagreement_score":0.56184435,"about_ca_system_score_codex":0.000059878974,"about_ca_system_score_gemma":0.00009415015,"threshold_uncertainty_score":0.92830783},"labels":[],"label_agreement":null},{"id":"W4386501607","doi":"10.1007/s40261-023-01282-7","title":"Pharmacokinetic and Exposure Response Analysis of the Double-Blind Randomized Study of Posaconazole and Voriconazole for Treatment of Invasive Aspergillosis","year":2023,"lang":"en","type":"article","venue":"Clinical Drug Investigation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Juravinski Hospital","funders":"Merck Sharp and Dohme","keywords":"Posaconazole; Voriconazole; Medicine; Aspergillosis; Pharmacokinetics; Population; Clinical endpoint; Internal medicine; Adverse effect; Quartile; Randomized controlled trial; Confidence interval; Antifungal; Immunology","score_opus":0.11925961162710076,"score_gpt":0.41330703928924056,"score_spread":0.2940474276621398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386501607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967377,0.00024833388,0.000005950035,0.0007916583,0.00005651107,0.0020994954,0.00003754011,0.000009396428,0.000013421174],"genre_scores_gemma":[0.9991313,0.00038455825,0.000063555046,0.000051349107,0.000021226359,0.00008713103,0.000026952872,0.000007416449,0.00022648962],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99788153,0.00057606644,0.0009667779,0.00026430175,0.00021797618,0.00009334878],"domain_scores_gemma":[0.9945414,0.004416497,0.00041563917,0.0002816778,0.00025139964,0.00009335094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020414041,0.00011148796,0.0010248325,0.00017042346,0.00004699254,0.0000037991485,0.0000540267,0.000068365516,0.000008010389],"category_scores_gemma":[0.0018797757,0.00006900152,0.0003097923,0.00071378285,0.00060423324,0.000036817706,0.00003388223,0.000050130297,2.6949172e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.19396906,0.0005820246,0.78598136,0.00013792733,0.0015784246,8.671614e-7,0.0031532957,0.000056900833,0.013634865,0.000050474842,0.00003209626,0.00082273077],"study_design_scores_gemma":[0.16706339,0.0009759413,0.80796283,0.00005001377,0.0048037483,1.7586267e-7,0.0014055631,0.0015383569,0.0159482,0.00019510994,0.0000056102645,0.00005104693],"about_ca_topic_score_codex":0.00010060671,"about_ca_topic_score_gemma":0.00014089985,"teacher_disagreement_score":0.026905678,"about_ca_system_score_codex":0.00001756436,"about_ca_system_score_gemma":0.00012425517,"threshold_uncertainty_score":0.28138006},"labels":[],"label_agreement":null},{"id":"W4386570575","doi":"10.1016/j.mmcr.2023.100607","title":"Cutaneous mucormycosis in the immunocompromised host: An important cause of persistent post traumatic skin lesions","year":2023,"lang":"en","type":"article","venue":"Medical Mycology Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; University of New Brunswick; Canada Research Chairs; St Joseph's Health Centre","funders":"","keywords":"Mucormycosis; Medicine; Amphotericin B; Rhizopus arrhizus; Dermatology; Skin biopsy; Biopsy; Lymphoma; Lesion; Surgery; Pathology; Antifungal; Biology","score_opus":0.03266524100132345,"score_gpt":0.3233590470162696,"score_spread":0.29069380601494615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386570575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99621135,0.0002993314,0.0000033504587,0.0019899886,0.00021358715,0.0009092109,0.000012981609,0.00006825094,0.0002919233],"genre_scores_gemma":[0.99878484,0.00019649166,0.000040271807,0.0006241379,0.00005539929,0.00008235829,0.00008034022,0.000020690817,0.00011548033],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99665886,0.0003131156,0.001339989,0.00041197598,0.00080191385,0.00047413213],"domain_scores_gemma":[0.99764407,0.0006810744,0.0002990238,0.00090287207,0.00014851578,0.00032447424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023749713,0.00020366372,0.00067717535,0.00021500682,0.00013952536,0.000008185613,0.0001200369,0.00032195722,0.00066009944],"category_scores_gemma":[0.002840449,0.00013156806,0.00036548343,0.0005987842,0.00043433375,0.00004596127,0.00006458042,0.0005401235,0.000015132985],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032578444,0.0013184617,0.10315166,0.00026186986,0.00018321126,0.88158196,0.005347735,0.000002860783,0.0045243674,0.000036188518,0.0005715311,0.0026943458],"study_design_scores_gemma":[0.0011781552,0.0018922422,0.43589467,0.00025780487,0.0004685972,0.53730506,0.021127608,0.0008787275,0.00036153564,0.00008093816,0.00032763692,0.00022699877],"about_ca_topic_score_codex":0.0013662664,"about_ca_topic_score_gemma":0.0026630745,"teacher_disagreement_score":0.3442769,"about_ca_system_score_codex":0.00010618221,"about_ca_system_score_gemma":0.0006809443,"threshold_uncertainty_score":0.72276264},"labels":[],"label_agreement":null},{"id":"W4386737847","doi":"10.21203/rs.3.rs-3275259/v1","title":"Compare the efficacy of antifungal agents as primary therapy for invasive aspergillosis: a network meta-analysis","year":2023,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Posaconazole; Voriconazole; Medicine; Meta-analysis; Aspergillosis; Caspofungin; Randomized controlled trial; Internal medicine; Observational study; Combination therapy; Amphotericin B; Adverse effect; Antifungal; Immunology; Dermatology","score_opus":0.38475535719527126,"score_gpt":0.4835300375095457,"score_spread":0.09877468031427444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386737847","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9286152,0.04279458,0.00046390257,0.007361446,0.00035928236,0.015512917,0.0017139874,0.00022181364,0.0029568532],"genre_scores_gemma":[0.9868756,0.004995564,0.00031180575,0.00032853562,0.00043862656,0.0010596123,0.0013767706,0.00009142264,0.00452205],"study_design_codex":"meta_analysis","study_design_gemma":"observational","domain_scores_codex":[0.9926821,0.001358449,0.0009801132,0.0012493397,0.0027244566,0.0010055533],"domain_scores_gemma":[0.9886634,0.005817005,0.00036836142,0.0026097803,0.002255428,0.00028603495],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00626409,0.00047976797,0.002924659,0.0005337867,0.00047132093,0.0001094578,0.0009674034,0.000370702,0.0008932927],"category_scores_gemma":[0.0025968866,0.00028870982,0.0049104444,0.0021196944,0.0005954093,0.000049846774,0.0009478515,0.0017040325,0.000083004015],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00966697,0.0020953657,0.35735282,0.008220248,0.48852533,0.00019462644,0.0020623177,0.0057233726,0.00061993516,0.0007289935,0.123692654,0.0011173685],"study_design_scores_gemma":[0.001624874,0.0007631605,0.9340762,0.00043637326,0.05619626,0.0000015757228,0.001002277,0.00039328556,0.00061353354,0.002181495,0.0023494416,0.00036151917],"about_ca_topic_score_codex":0.0007098457,"about_ca_topic_score_gemma":0.0006455357,"teacher_disagreement_score":0.5767234,"about_ca_system_score_codex":0.00025961004,"about_ca_system_score_gemma":0.0015585884,"threshold_uncertainty_score":0.9999565},"labels":[],"label_agreement":null},{"id":"W4386835210","doi":"10.20944/preprints202309.0977.v1","title":"Mitogenome Variations in a Global Population of Aspergillus fumigatus","year":2023,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Phylogenetic tree; Evolutionary biology; Mitochondrial DNA; Aspergillus fumigatus; Population; Genetics; Phylogenetics; Genome; Gene","score_opus":0.15559927781975977,"score_gpt":0.3933010719760498,"score_spread":0.23770179415629003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386835210","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99266165,0.0001532565,0.00018866213,0.00047966425,0.0005820667,0.00090324815,0.00013597014,0.00013838006,0.004757073],"genre_scores_gemma":[0.9977025,0.00014523219,0.0003875487,0.00004437246,0.00013307527,0.00007064249,0.0003138944,0.00002982184,0.0011729499],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99737173,0.00012228359,0.0008607552,0.00084826205,0.00047665153,0.0003203406],"domain_scores_gemma":[0.9979882,0.000078268466,0.00030318098,0.0012884313,0.00020614793,0.00013577283],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00071694196,0.00026539605,0.0007212232,0.00017766326,0.000040951512,0.0000064558076,0.0002499422,0.00044997386,0.00038536562],"category_scores_gemma":[0.0011115823,0.00027749332,0.00029982728,0.00044734872,0.00007724899,0.000052045645,0.00072920305,0.0006116615,0.00046364887],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022406333,0.00024798186,0.9943069,0.0005652729,0.00011156892,0.000032314536,0.0002836397,0.00025991298,0.002604176,0.0010630128,0.000013151581,0.00028799902],"study_design_scores_gemma":[0.00053174084,0.000022641112,0.9899877,0.00047520682,0.000111149515,0.0000032833225,0.000068526606,0.00018865353,0.0005623583,0.007759959,0.00009894123,0.00018987108],"about_ca_topic_score_codex":0.0039557912,"about_ca_topic_score_gemma":0.0015100032,"teacher_disagreement_score":0.006696946,"about_ca_system_score_codex":0.000615746,"about_ca_system_score_gemma":0.0003532169,"threshold_uncertainty_score":0.99996775},"labels":[],"label_agreement":null},{"id":"W4386944181","doi":"10.1128/mbio.01810-23","title":"Enhanced fungal specificity and <i>in vivo</i> therapeutic efficacy of a C-22-modified FK520 analog against <i>C. neoformans</i>","year":2023,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Science Foundation; National Institutes of Health; National Cancer Institute; National Institute of General Medical Sciences; Canadian Institute for Advanced Research","keywords":"Antifungal; Cryptococcus neoformans; Antifungal drugs; Medicine; In vivo; Population; Pharmacology; Intensive care medicine; Biology; Microbiology; Biotechnology","score_opus":0.024644954322354296,"score_gpt":0.284414543021869,"score_spread":0.2597695886995147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386944181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98498034,0.00028174478,0.0002116888,0.00020291236,0.000092016846,0.00038222282,0.000024145325,0.00007993022,0.013744993],"genre_scores_gemma":[0.99763983,0.00043565242,0.000036598318,0.00045087194,0.00006512214,0.0000084906615,0.000019164143,0.00001802461,0.0013262318],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99856365,0.000048284528,0.00038940585,0.0003492999,0.00027247195,0.00037688125],"domain_scores_gemma":[0.99922574,0.00014816187,0.000078274046,0.00037493816,0.00006101716,0.00011186499],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003996818,0.00017011099,0.00044222912,0.00013805297,0.000057150854,0.0000120784525,0.00009465792,0.000117240794,0.00006805522],"category_scores_gemma":[0.00007564734,0.00014494613,0.00011357045,0.00057793764,0.00018003315,0.00006843765,0.00004740245,0.0002167981,0.000034152457],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002531494,0.00052235706,0.1443135,0.00040252283,0.000082001134,0.00011050083,0.0009922486,0.000025363488,0.8305494,0.00041207715,0.0015021495,0.018556396],"study_design_scores_gemma":[0.00348841,0.00027204864,0.86656016,0.00018575315,0.00005169237,0.000004371067,0.00044436217,0.0006234954,0.12656687,0.00019606277,0.0013780788,0.00022871717],"about_ca_topic_score_codex":0.000038465878,"about_ca_topic_score_gemma":0.00015345268,"teacher_disagreement_score":0.72224665,"about_ca_system_score_codex":0.000047358473,"about_ca_system_score_gemma":0.00007389168,"threshold_uncertainty_score":0.59107316},"labels":[],"label_agreement":null},{"id":"W4386968272","doi":"10.1038/s41467-023-41509-x","title":"Genotypic diversity and unrecognized antifungal resistance among populations of Candida glabrata from positive blood cultures","year":2023,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Human Genome Research Institute; Center for Research Computing, University of Pittsburgh; National Institute of Allergy and Infectious Diseases; University of Pittsburgh; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; U.S. Department of Veterans Affairs; York University; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Fluconazole; Biology; Candida glabrata; Genotype; Microbiology; Genetic diversity; Virulence; Drug resistance; Cryptococcus neoformans; Population; Candida albicans; Antifungal; Genetics; Medicine; Gene","score_opus":0.03424256914694131,"score_gpt":0.32092182552147935,"score_spread":0.28667925637453806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386968272","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98944825,0.006048643,0.000017685485,0.001424315,0.00006574752,0.00033356505,0.00063136104,0.000088673536,0.0019417513],"genre_scores_gemma":[0.99348325,0.0011599581,0.003264203,0.00012650511,0.000028722352,0.00000761077,0.00103786,0.000011238803,0.00088063494],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990118,0.000098458906,0.00024318737,0.0002564172,0.00023210423,0.00015801816],"domain_scores_gemma":[0.9979493,0.00032841667,0.00012509426,0.0011901453,0.0003080414,0.000099012825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019535758,0.00012546242,0.0002845979,0.00009943698,0.0009262114,0.000013957692,0.0003568867,0.00024826493,0.000029999426],"category_scores_gemma":[0.0004995628,0.000113938964,0.00008651302,0.0005779772,0.00037257015,0.00012222433,0.0007778817,0.00061781367,0.0000058001365],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000140845,0.00012789771,0.9861214,0.000028375553,0.00013662153,0.000005865248,0.0012100958,3.7961192e-7,0.006303624,0.003095958,0.0027253109,0.00010360363],"study_design_scores_gemma":[0.00071385177,0.000022912025,0.9956653,0.00012576526,0.0003130902,9.3939684e-7,0.00048821262,0.00004872317,0.0012312785,0.00096514204,0.00032055887,0.00010423845],"about_ca_topic_score_codex":0.0009100118,"about_ca_topic_score_gemma":0.017011618,"teacher_disagreement_score":0.016101606,"about_ca_system_score_codex":0.000034347606,"about_ca_system_score_gemma":0.000059772752,"threshold_uncertainty_score":0.9492882},"labels":[],"label_agreement":null},{"id":"W4387011773","doi":"10.1101/2023.09.25.558961","title":"Deacetylation by sirtuins is important for <i>Aspergillus fumigatus</i> pathogenesis and virulence","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Innovation Cluster (Canada)","funders":"National Institute of Allergy and Infectious Diseases; Laboratório Nacional de Biociências; National Institutes of Health; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Centro Nacional de Pesquisa em Energia e Materiais; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Virulence; Aspergillus fumigatus; Biology; Sirtuin; Acetylation; Histone; Gene; SIRT2; Microbiology; Genetics","score_opus":0.02078123345724959,"score_gpt":0.2504148883778697,"score_spread":0.2296336549206201,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387011773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98584104,0.0047593503,0.00333099,0.00084092224,0.0005817676,0.001722045,0.002458883,0.0004610026,0.0000039834777],"genre_scores_gemma":[0.991778,0.0036674687,0.0029092606,0.0007495004,0.00031797888,0.00030679608,0.0000054402312,0.0001845143,0.00008104417],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99654734,0.00006109672,0.000798645,0.0014649265,0.00049882726,0.0006291574],"domain_scores_gemma":[0.9971682,0.0001432611,0.00041423342,0.0012534445,0.0005883007,0.00043257652],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00086807983,0.0005907076,0.000863875,0.00016239572,0.00022847226,0.000113175745,0.00023127136,0.000705877,0.000029371624],"category_scores_gemma":[0.0005401915,0.0005932822,0.00027209823,0.00037206954,0.00023153532,0.00012067885,0.0002619204,0.00051524624,0.000030218864],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021008163,0.0001289971,0.120490365,0.0014175061,0.00017367836,0.00004044615,0.000018413532,0.0000015717982,0.8733934,0.00017557913,0.0039411876,0.000008757599],"study_design_scores_gemma":[0.001654055,0.00029445338,0.55388075,0.0011620043,0.00073885405,5.3894347e-8,0.000020001678,0.0012922224,0.4270959,0.00001957376,0.012565782,0.0012763285],"about_ca_topic_score_codex":0.000059961174,"about_ca_topic_score_gemma":0.000009599517,"teacher_disagreement_score":0.44629753,"about_ca_system_score_codex":0.00026075443,"about_ca_system_score_gemma":0.00060842757,"threshold_uncertainty_score":0.99965185},"labels":[],"label_agreement":null},{"id":"W4387082132","doi":"10.1016/j.jtct.2023.09.017","title":"Incidence and Impact of Fungal Infections in Post-Transplantation Cyclophosphamide-Based Graft-versus-Host Disease Prophylaxis and Haploidentical Hematopoietic Cell Transplantation: A Center for International Blood and Marrow Transplant Research Analysis","year":2023,"lang":"en","type":"article","venue":"Transplantation and Cellular Therapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Environmental Health Sciences; National Institute of Allergy and Infectious Diseases; Gilead Sciences; National Cancer Institute; bluebird bio; Kiadis Pharma; Astellas Pharma; Adaptive Biotechnologies; Incyte; National Heart, Lung, and Blood Institute; Actinium Pharmaceuticals; CareDx; Office of Naval Research; Jazz Pharmaceuticals; Atara Biotherapeutics; Bristol-Myers Squibb; CSL Behring; BeiGene; HistoGenetics; Gateway for Cancer Research; GlaxoSmithKline; Health Resources and Services Administration; Astellas Pharma US; Amgen","keywords":"Medicine; Cumulative incidence; Internal medicine; Transplantation; Incidence (geometry); Proportional hazards model; Graft-versus-host disease; Hematopoietic stem cell transplantation; Cyclophosphamide; Immunology; Calcineurin; Gastroenterology; Chemotherapy","score_opus":0.024553743561290056,"score_gpt":0.3286458289797422,"score_spread":0.3040920854184522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387082132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944475,0.0009773672,0.002545717,0.0002304046,0.00006199392,0.00088458776,0.0007894658,0.00003619075,0.000026771597],"genre_scores_gemma":[0.97991663,0.018686157,0.00013261559,0.000031706968,0.000026146601,0.00007954295,0.0010757754,0.000020902973,0.00003052353],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981924,0.00015592549,0.00044578096,0.00049352687,0.00041908337,0.0002932381],"domain_scores_gemma":[0.9987674,0.00048124162,0.00006991626,0.00014335841,0.00030445843,0.0002336667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006226692,0.00022281767,0.00036400484,0.0006558236,0.0001652401,0.000057489884,0.000060170514,0.00012247663,0.000037273036],"category_scores_gemma":[0.000033520453,0.00019560412,0.00015700368,0.00065551786,0.00029367945,0.00020333385,0.0000044041954,0.0002154732,9.416171e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014822014,0.0003984411,0.9183576,0.0017312841,0.0003158481,0.00021506134,0.0039086095,0.000045447512,0.059618298,0.00009752189,0.0000016606773,0.00048818137],"study_design_scores_gemma":[0.009829938,0.0011358748,0.9756994,0.00021863375,0.0007983213,0.0000311501,0.00029660974,0.0010548906,0.010633159,0.00009939126,0.0000038189887,0.00019878882],"about_ca_topic_score_codex":0.00025861955,"about_ca_topic_score_gemma":0.0006039464,"teacher_disagreement_score":0.05734179,"about_ca_system_score_codex":0.000027313072,"about_ca_system_score_gemma":0.00012162702,"threshold_uncertainty_score":0.79765046},"labels":[],"label_agreement":null},{"id":"W4387114464","doi":"10.4212/cjhp.3408","title":"Treatments and Outcomes of Critically Ill Patients with Candida spp. Colonization of the Lower Respiratory Tract in Regina, Saskatchewan","year":2023,"lang":"en","type":"article","venue":"The Canadian Journal of Hospital Pharmacy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"Saskatchewan Health Authority; University of British Columbia; Saskatchewan Health; Island Health; University of Saskatchewan","funders":"","keywords":"Medicine; Odds ratio; Mechanical ventilation; Confidence interval; Internal medicine; Colonization; Logistic regression; Intensive care unit; Microbiology; Biology","score_opus":0.012355235013506093,"score_gpt":0.2732607473641708,"score_spread":0.26090551235066467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387114464","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99425304,0.00014720904,9.465363e-7,0.0050688116,0.00013255452,0.0002640305,0.000033383232,0.0000016678723,0.00009837417],"genre_scores_gemma":[0.9992089,0.000012359695,0.000011229148,0.0005677302,0.000017604842,0.0000011879602,0.0000016771711,0.000009962048,0.00016931306],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99918157,0.00005832218,0.00026655901,0.00007673038,0.00025166807,0.00016512306],"domain_scores_gemma":[0.9988249,0.00007019628,0.00016933383,0.00014563667,0.0006150931,0.00017484892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026189187,0.00008684767,0.00024363831,0.00009525035,0.00006560774,0.000008179408,0.00010888942,0.000023982666,0.000027499833],"category_scores_gemma":[0.00039558302,0.000044975575,0.0000644684,0.00026036287,0.00026784872,0.00009338863,0.000008374241,0.0001650385,8.955704e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018439343,0.00013362558,0.997378,0.000027108686,0.000061353,0.00006035197,0.00090663804,0.0000050312187,0.000089823516,0.00000960475,0.0006912385,0.00045286468],"study_design_scores_gemma":[0.0021738973,0.00074630167,0.995509,0.00012045775,0.0001037969,0.000002441375,0.0006357124,0.000004397772,0.00034552568,0.00005819961,0.0002543197,0.000045934405],"about_ca_topic_score_codex":0.004228234,"about_ca_topic_score_gemma":0.03327137,"teacher_disagreement_score":0.029043136,"about_ca_system_score_codex":0.00013572769,"about_ca_system_score_gemma":0.0010391193,"threshold_uncertainty_score":0.9843689},"labels":[],"label_agreement":null},{"id":"W4387157113","doi":"10.1513/annalsats.202303-218cc","title":"Endoscopic Removal of Pulmonary Aspergilloma in a Nonsurgical Candidate","year":2023,"lang":"en","type":"article","venue":"Annals of the American Thoracic Society","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Medicine; Aspergilloma; Surgery; Lung; Intensive care medicine; Radiology; Internal medicine","score_opus":0.0807907721099805,"score_gpt":0.4088037535077546,"score_spread":0.32801298139777413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387157113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948787,0.000356446,0.00000806872,0.0029598328,0.00004594582,0.0001999667,0.000027309641,0.000030850664,0.0014928961],"genre_scores_gemma":[0.9968047,0.0011879115,0.00028936611,0.0006722853,0.000033344906,0.0000070252254,0.000007326044,0.000014377066,0.0009836579],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985655,0.00013183073,0.00037279908,0.00023820707,0.0003871518,0.00030450762],"domain_scores_gemma":[0.99884206,0.0001842445,0.00025650006,0.000534427,0.00010975104,0.000073031406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006662896,0.00012284887,0.00054020644,0.00004592213,0.0000468399,0.0000027718456,0.00020073468,0.00004960794,0.000028856377],"category_scores_gemma":[0.00020966122,0.00008432529,0.00049069093,0.0014251418,0.0007441898,0.000038772287,0.00011972391,0.00021553495,0.00001055517],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007130448,0.0002814545,0.91065943,0.00031121288,0.00014401041,0.00014562452,0.0008686216,0.000014983239,0.041889656,0.000060605176,0.0031279582,0.04178339],"study_design_scores_gemma":[0.00018522442,0.00011592273,0.98219633,0.00020598384,0.000029580951,0.0000223578,0.0016292065,0.00054318074,0.013889095,0.0002050434,0.00090632227,0.00007173817],"about_ca_topic_score_codex":0.00047991742,"about_ca_topic_score_gemma":0.00002734819,"teacher_disagreement_score":0.071536906,"about_ca_system_score_codex":0.000023066767,"about_ca_system_score_gemma":0.00014567815,"threshold_uncertainty_score":0.34386858},"labels":[],"label_agreement":null},{"id":"W4387326961","doi":"10.1128/mbio.01807-23","title":"The Adr1 transcription factor directs regulation of the ergosterol pathway and azole resistance in <i>Candida albicans</i>","year":2023,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Concordia University; Université Laval; Montreal Heart Institute","funders":"Fonds de recherche du Québec; Concordia University; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Candida albicans; Transcription factor; Ergosterol; Corpus albicans; Biology; Zinc finger transcription factor; Biochemistry; Saccharomyces cerevisiae; Gene; Zinc finger; Microbiology; Cell biology; Chemistry","score_opus":0.013442095105597178,"score_gpt":0.2388292469842727,"score_spread":0.2253871518786755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387326961","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956415,0.00057035877,0.000010348466,0.0019072836,0.000102305734,0.00030691858,0.000020205778,0.000024399931,0.0014166771],"genre_scores_gemma":[0.9942046,0.00019569299,0.000010205353,0.000099558274,0.000023549155,0.000011226588,0.000006064236,0.000007691628,0.005441403],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99921185,0.000068069356,0.00020083005,0.00015868427,0.00021014412,0.00015042239],"domain_scores_gemma":[0.9994996,0.00009678721,0.000054788703,0.00027861563,0.000038174585,0.000032021093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025329742,0.00007340453,0.00013746317,0.000027346268,0.00010077383,0.00001082873,0.00006412783,0.000053382046,0.000014398256],"category_scores_gemma":[0.00009908967,0.000041818803,0.00005203841,0.00029466543,0.00012604723,0.000048109046,0.000014597644,0.00010358146,0.0000034973523],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009021151,0.000056326273,0.44918704,0.00023728113,0.000020882082,0.000004438017,0.0024083024,0.0000018988931,0.53480756,0.000816534,0.0016731939,0.0098844245],"study_design_scores_gemma":[0.00047426566,0.000030375266,0.9688014,0.00013164007,0.000008859473,4.185926e-7,0.00019656378,0.00003720443,0.022874169,0.00046668216,0.0069363457,0.000042076073],"about_ca_topic_score_codex":0.00006660075,"about_ca_topic_score_gemma":0.0062057176,"teacher_disagreement_score":0.51961434,"about_ca_system_score_codex":0.000038442322,"about_ca_system_score_gemma":0.00004661657,"threshold_uncertainty_score":0.3462936},"labels":[],"label_agreement":null},{"id":"W4387393578","doi":"10.1093/cid/ciad607","title":"Food and Drug Administration Public Workshop Summary—Addressing Challenges in Inhaled Antifungal Drug Development","year":2023,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Center for Drug Evaluation and Research; U.S. Food and Drug Administration","keywords":"Medicine; Intensive care medicine; Clinical trial; Food and drug administration; Drug; Antifungal; Drug development; Clinical research; Antifungal drug; Antifungal drugs; Aspergillosis; Pharmacology; Immunology; Internal medicine","score_opus":0.16023748182507272,"score_gpt":0.39329076823989473,"score_spread":0.233053286414822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387393578","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907001,0.0046480284,0.000010963873,0.0025347024,0.00026438758,0.00042568773,0.000011585832,0.00031618026,0.0010883581],"genre_scores_gemma":[0.9943236,0.0045995596,0.000021378712,0.00022045492,0.00021784984,0.000053367014,0.000097586875,0.000025625835,0.0004405835],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976118,0.00027084272,0.00077748136,0.00063667505,0.00030104702,0.00040215522],"domain_scores_gemma":[0.99787366,0.0011215475,0.00013310788,0.00033438258,0.00012019579,0.0004170848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010840455,0.00021525692,0.0005322271,0.00020381153,0.00017992103,0.00008487143,0.00007863706,0.00014194832,0.000047358375],"category_scores_gemma":[0.0028201926,0.00019414128,0.00014683515,0.00044345504,0.00026477023,0.00021913339,0.00010883154,0.00037212027,0.000048658218],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018055577,0.0008955513,0.92892814,0.00031739788,0.000067195506,0.00015357566,0.000186409,6.5564626e-7,0.000010234864,0.00016591774,0.0016113452,0.067483045],"study_design_scores_gemma":[0.0015228456,0.00022049938,0.99457246,0.00042133153,0.000055810484,0.0000069318476,0.0007349096,0.00006389003,0.00004879525,0.00043599316,0.0017058731,0.00021062982],"about_ca_topic_score_codex":0.0000033619983,"about_ca_topic_score_gemma":0.0014284204,"teacher_disagreement_score":0.06727242,"about_ca_system_score_codex":0.00008169325,"about_ca_system_score_gemma":0.0005554984,"threshold_uncertainty_score":0.7916851},"labels":[],"label_agreement":null},{"id":"W4387552133","doi":"10.1016/j.cyto.2023.156384","title":"Functional insights into human macrophage response against Scedosporium apiospermum and Scedosporium dehoogii","year":2023,"lang":"en","type":"article","venue":"Cytokine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; Universite Angers; Canadian Institute for Theoretical Astrophysics","keywords":"Scedosporium apiospermum; Immune system; Biology; Chemokine; Macrophage; Context (archaeology); Microbiology; Immunology; Cytokine; Innate immune system; Voriconazole; In vitro; Antifungal","score_opus":0.02166202759782764,"score_gpt":0.2842924379570659,"score_spread":0.26263041035923823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387552133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99514234,0.00059227645,0.000088318775,0.0013778463,0.0003634405,0.0003667759,0.000016840275,0.00034883898,0.0017033303],"genre_scores_gemma":[0.98638254,0.00018906493,0.00013312744,0.00081611925,0.00047484008,0.000022305981,0.00024872704,0.000049282364,0.011683993],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99788046,0.00009343372,0.00042701812,0.0006516205,0.00050542207,0.0004420311],"domain_scores_gemma":[0.9986228,0.0001366856,0.00008816628,0.0005907282,0.0002147657,0.00034686414],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00062260515,0.00029055035,0.0004474083,0.00027231118,0.00038800665,0.00003739868,0.00010991659,0.00019607537,0.000253706],"category_scores_gemma":[0.00039951873,0.00024876968,0.0001390679,0.00072602794,0.00032132573,0.00015351559,0.00013712866,0.0003743435,0.00046006896],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004042348,0.00019524239,0.06883219,0.0002534918,0.00007813,0.0014185265,0.00075984903,0.000009362376,0.9062354,0.0007702841,0.015547511,0.001857683],"study_design_scores_gemma":[0.0021474615,0.00040291264,0.95592034,0.000111254616,0.0000555292,0.000028108192,0.0003937349,0.00013818168,0.020222854,0.0006646647,0.019629493,0.0002854411],"about_ca_topic_score_codex":0.000026319301,"about_ca_topic_score_gemma":0.00005745607,"teacher_disagreement_score":0.8870882,"about_ca_system_score_codex":0.00015478635,"about_ca_system_score_gemma":0.00016587041,"threshold_uncertainty_score":0.9999965},"labels":[],"label_agreement":null},{"id":"W4387650884","doi":"10.20944/preprints202310.0546.v1","title":"Descriptive View on Candida Auris Occurrence in a Tertiary Health Institution in Riyadh, Saudi Arabia","year":2023,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"College of Medicine, King Saud University; King Saud University","keywords":"Candida auris; Medicine; Epidemiology; Pediatrics; Emergency medicine; Internal medicine; Antifungal; Dermatology","score_opus":0.18202857049873095,"score_gpt":0.39799994535342514,"score_spread":0.2159713748546942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387650884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922972,0.0007040707,0.000095035364,0.0022295278,0.0007392454,0.0021501994,0.00012100549,0.00017573293,0.0014880182],"genre_scores_gemma":[0.99521816,0.0028102973,0.00006423321,0.0007814966,0.000090776746,0.00032473178,0.00019160232,0.000031241063,0.00048744725],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9955758,0.00040262053,0.0011248668,0.0016338335,0.000578109,0.0006848091],"domain_scores_gemma":[0.9976933,0.00011882811,0.0003558289,0.0014386848,0.00011971372,0.00027365316],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0020260084,0.00048057595,0.0010885878,0.0005120118,0.000085596505,0.000015403775,0.00037185726,0.00042729607,0.00019241346],"category_scores_gemma":[0.0012021887,0.00047164448,0.00023150208,0.0005305951,0.0002178529,0.00010727145,0.00072208064,0.0023238608,0.0010510213],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005241575,0.0005034576,0.991348,0.0017027499,0.000040563667,0.0002036869,0.0023601085,0.00017045291,0.00031425036,0.000085272026,0.00022889393,0.0025183582],"study_design_scores_gemma":[0.0009081565,0.000083192506,0.98923165,0.006763692,0.000025185678,0.0000047273384,0.0002623881,0.00011217863,0.00074869115,0.0009359766,0.00058874657,0.00033539484],"about_ca_topic_score_codex":0.010292257,"about_ca_topic_score_gemma":0.012973929,"teacher_disagreement_score":0.0050609424,"about_ca_system_score_codex":0.0021667616,"about_ca_system_score_gemma":0.0018784987,"threshold_uncertainty_score":0.9999778},"labels":[],"label_agreement":null},{"id":"W4387691640","doi":"10.1021/acsami.3c09870","title":"Host Cell Geometry and Cytoskeletal Organization Governs <i>Candida</i>–Host Cell Interactions at the Nanoscale","year":2023,"lang":"en","type":"article","venue":"ACS Applied Materials & Interfaces","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs; Agence Nationale de la Recherche; Centre National de la Recherche Scientifique; Faculty of Graduate Studies and Research, University of Regina; University of Regina","keywords":"Materials science; Nanoscopic scale; Cytoskeleton; Host (biology); Nanotechnology; Cell; Biophysics; Biology; Ecology; Biochemistry","score_opus":0.008492716930099,"score_gpt":0.24153930694946538,"score_spread":0.23304659001936637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387691640","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938389,0.00013919163,0.000017233191,0.0006159961,0.00046173699,0.0004992124,0.00021399469,0.00015598169,0.004057758],"genre_scores_gemma":[0.9896353,0.000439889,0.00002561715,0.00031153596,0.00015565749,0.00003179016,0.00016376356,0.00005076045,0.009185674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985748,0.00003825332,0.00037083623,0.00042953074,0.00026258177,0.00032402328],"domain_scores_gemma":[0.9991218,0.00014226751,0.00016403492,0.00040681157,0.00008405408,0.0000810658],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002735415,0.00023574651,0.0003458451,0.000072799885,0.00030317952,0.00013116334,0.00015254498,0.00011234333,0.0014257433],"category_scores_gemma":[0.00006589983,0.00016770193,0.000021741258,0.00038338234,0.00017684171,0.00010695009,0.00032282597,0.00014723139,0.0011173016],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021912584,0.00007449709,0.0040240083,0.00021199592,0.000026709633,0.000005485894,0.00047292656,0.0000011192271,0.98712236,0.000049928367,0.007720142,0.00007171011],"study_design_scores_gemma":[0.0005261116,0.000081690785,0.028242005,0.000041189734,0.000086903645,0.000008739429,0.0014996993,5.620037e-7,0.96698177,0.000024386904,0.002341448,0.00016547235],"about_ca_topic_score_codex":0.00009341141,"about_ca_topic_score_gemma":0.00011856674,"teacher_disagreement_score":0.024217997,"about_ca_system_score_codex":0.000106206244,"about_ca_system_score_gemma":0.000041207793,"threshold_uncertainty_score":0.99966043},"labels":[],"label_agreement":null},{"id":"W4387746625","doi":"10.1016/s1569-1993(23)01259-6","title":"332 LAU-7b restores total and membrane CFTR protein expression inhibited by Aspergillus fumigatus infection","year":2023,"lang":"en","type":"article","venue":"Journal of Cystic Fibrosis","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Regional Development Fund; Hospital for Sick Children; Ministère de l'Économie, de la Science et de l'Innovation - Québec; National Institutes of Health; Ontario Genomics; Genome Canada","keywords":"Aspergillus fumigatus; Cystic fibrosis; Medicine; Microbiology; Protein expression; Immunology; Biology; Internal medicine; Biochemistry; Gene","score_opus":0.00968484205183178,"score_gpt":0.25652788233100365,"score_spread":0.24684304027917187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387746625","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997708,0.0008793075,0.00024222901,0.00046879743,0.00017634589,0.00024441865,0.000016372118,0.000051360064,0.00021314554],"genre_scores_gemma":[0.9972632,0.00015082874,0.0008640037,0.00004169792,0.0002177512,0.000005814605,0.000014837561,0.00002238752,0.0014195128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983992,0.00009580769,0.00052224303,0.0001986875,0.0005356375,0.00024845486],"domain_scores_gemma":[0.998959,0.0001492622,0.00025811003,0.00018383676,0.00021555202,0.00023422421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005192887,0.00016247864,0.00041396663,0.00020254999,0.00012094565,0.00003762605,0.00004750993,0.00015278845,0.00008209767],"category_scores_gemma":[0.000962418,0.000120318036,0.00012362585,0.00038902232,0.000105455736,0.00022579984,0.00004395151,0.00035339693,0.000018594566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014616048,0.00008617927,0.016348993,0.0003371919,0.000038160044,0.00007878958,0.00016852154,0.000010945067,0.97153413,0.000010908156,0.008110063,0.0018145059],"study_design_scores_gemma":[0.002889192,0.0023029225,0.4890075,0.0024550615,0.00019445895,0.0003000154,0.00024358586,0.0002613859,0.49763712,0.0002148421,0.0042369305,0.00025697672],"about_ca_topic_score_codex":0.000049559625,"about_ca_topic_score_gemma":0.000009138515,"teacher_disagreement_score":0.473897,"about_ca_system_score_codex":0.00009511817,"about_ca_system_score_gemma":0.00009705558,"threshold_uncertainty_score":0.4906427},"labels":[],"label_agreement":null},{"id":"W4387772269","doi":"10.1371/journal.pgen.1011002","title":"Cross-feeding affects the target of resistance evolution to an antifungal drug","year":2023,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; PROTEO","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fonds de Recherche du Québec - Santé; Genome Canada","keywords":"Biology; Drug resistance; Cytosine deaminase; Genetics; Mutant; Antifungal drug; Saccharomyces cerevisiae; Mutation; Computational biology; Gene; Candida albicans","score_opus":0.027864637592250427,"score_gpt":0.315478015987262,"score_spread":0.28761337839501155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387772269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99653774,0.0005242488,0.00015943657,0.0005613518,0.00015426104,0.00034130536,0.000034089215,0.0000948784,0.0015926916],"genre_scores_gemma":[0.99383134,0.000045503228,0.000955419,0.00012390941,0.00020276904,0.0000130700855,0.000018811974,0.000025706982,0.0047834762],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99857384,0.00006583284,0.0002444871,0.00030739474,0.0004885095,0.00031994405],"domain_scores_gemma":[0.9988797,0.00011780745,0.00007159087,0.0005723985,0.00021516078,0.00014334907],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005142504,0.00012821017,0.0002407923,0.000082401886,0.0001536113,0.000024001982,0.00018258454,0.000066035725,0.000054617507],"category_scores_gemma":[0.00037550714,0.000096445714,0.00007994519,0.0006105833,0.0001556122,0.000054078522,0.00006946803,0.00014815482,0.0000700182],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032736603,0.00013651587,0.5347477,0.0003365188,0.000040741867,0.000017898434,0.0011027963,0.00017082342,0.45842156,0.00028540156,0.00424354,0.00016912051],"study_design_scores_gemma":[0.00036878887,0.00018715659,0.82102287,0.0001655074,0.000058711485,0.000001422672,0.00063064013,0.0020029396,0.17368488,0.00033598626,0.0014018187,0.00013929073],"about_ca_topic_score_codex":0.0000050264534,"about_ca_topic_score_gemma":0.00008605414,"teacher_disagreement_score":0.28627515,"about_ca_system_score_codex":0.000068028385,"about_ca_system_score_gemma":0.00010516608,"threshold_uncertainty_score":0.39329422},"labels":[],"label_agreement":null},{"id":"W4387880751","doi":"10.1038/s41590-023-01637-4","title":"Fungal microbiota sustains lasting immune activation of neutrophils and their progenitors in severe COVID-19","year":2023,"lang":"en","type":"article","venue":"Nature Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; Weill Cornell Medical College; U.S. Department of Health and Human Services; National Institutes of Health; Argenx; Moderna; Crohn's and Colitis Foundation; Pfizer; National Institute of Mental Health; Canadian Institute for Advanced Research; Leona M. and Harry B. Helmsley Charitable Trust; Office of Extramural Research, National Institutes of Health; National Cancer Institute","keywords":"Neutrophilia; Immunology; Biology; Immune system; Dysbiosis; Candida albicans; Microbiology; Gut flora","score_opus":0.012734761175642064,"score_gpt":0.2926380279712272,"score_spread":0.27990326679558514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387880751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947554,0.0021594192,0.000012629821,0.002314392,0.00013616592,0.00039248378,0.000016758106,0.00006817695,0.0001445671],"genre_scores_gemma":[0.99914277,0.0001864485,0.000046831225,0.00022654879,0.0000488301,0.000008853439,0.000057914014,0.000015211455,0.00026659714],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99895686,0.000097752745,0.0002959986,0.00027730968,0.0000791216,0.00029297022],"domain_scores_gemma":[0.9991918,0.00028070956,0.00011049044,0.0002554871,0.000112556256,0.00004891284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032216133,0.00014384376,0.00035992914,0.00026098502,0.00007301663,0.0000057067805,0.000089416324,0.000497236,0.000020532392],"category_scores_gemma":[0.0010794131,0.000114982875,0.00006753501,0.0006088223,0.00019583579,0.00006547507,0.000087463915,0.00078826724,0.0000039383217],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009391813,0.00007680314,0.16350618,0.00027209226,0.0000768776,0.000040241965,0.0008817851,0.000005883561,0.8316951,0.00034770733,0.00016308887,0.0019950657],"study_design_scores_gemma":[0.0019636098,0.00026759098,0.9387444,0.00011190497,0.000018053059,0.00008631801,0.003430401,0.0000339739,0.053006355,0.00031697532,0.001881734,0.00013866622],"about_ca_topic_score_codex":0.00008238549,"about_ca_topic_score_gemma":0.00005479165,"teacher_disagreement_score":0.7786887,"about_ca_system_score_codex":0.00015683676,"about_ca_system_score_gemma":0.0002763964,"threshold_uncertainty_score":0.46888655},"labels":[],"label_agreement":null},{"id":"W4387966939","doi":"10.7554/elife.81406","title":"Candida albicans exhibits heterogeneous and adaptive cytoprotective responses to antifungal compounds","year":2023,"lang":"en","type":"article","venue":"eLife","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Canada Foundation for Innovation","keywords":"Candida albicans; Transcriptome; Biology; Downregulation and upregulation; Corpus albicans; Cell biology; Antifungal drug; Ribosome; Ribosomal protein; Fluconazole; Gene; Cell; Microbiology; Gene expression; RNA; Genetics; Antifungal","score_opus":0.03591121448631351,"score_gpt":0.30967597078343717,"score_spread":0.27376475629712366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387966939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962783,0.0002098301,0.00017503373,0.0008046814,0.00009624531,0.00058594014,0.000075439224,0.00017815914,0.0015963811],"genre_scores_gemma":[0.9939627,0.000065099935,0.00028225445,0.0009658595,0.0001362731,0.00003956076,0.0000121691,0.000025923879,0.0045101363],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99848914,0.00008918388,0.00021408868,0.0004517003,0.00038968172,0.00036622243],"domain_scores_gemma":[0.999016,0.00018145067,0.000038538998,0.00031469294,0.00014111873,0.00030820825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035422342,0.0001747864,0.0003427183,0.00015606055,0.0001756219,0.000024903778,0.000068899324,0.00008639814,0.000071841016],"category_scores_gemma":[0.00040624605,0.00015249282,0.000075869255,0.0004331616,0.00012926366,0.000050386105,0.00009123243,0.00018847015,0.00019852308],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0181521,0.00034708265,0.62061733,0.00024500335,0.0004696271,0.0028266,0.0054385196,0.000046240442,0.31557283,0.00041892848,0.02455082,0.011314891],"study_design_scores_gemma":[0.0010154095,0.0012379147,0.94949687,0.00015498223,0.00005208299,0.00010592241,0.0009632635,0.00025248632,0.040084254,0.0000651664,0.0062941196,0.00027751713],"about_ca_topic_score_codex":0.00023130336,"about_ca_topic_score_gemma":0.00043634913,"teacher_disagreement_score":0.32887954,"about_ca_system_score_codex":0.00009624644,"about_ca_system_score_gemma":0.00015583652,"threshold_uncertainty_score":0.6218477},"labels":[],"label_agreement":null},{"id":"W4387969752","doi":"10.1093/g3journal/jkad250","title":"Evolutionary diversity of the control of the azole response by Tra1 across yeast species","year":2023,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Schulich School of Medicine and Dentistry; Canadian Institutes of Health Research; Schulich School of Medicine and Dentistry, Western University","keywords":"Biology; Azole; Candida albicans; Fungal protein; ATP-binding cassette transporter; Caspofungin; Schizosaccharomyces pombe; Genetics; Saccharomyces cerevisiae; Microbiology; Fluconazole; Yeast; Gene; Transporter","score_opus":0.022043944692811353,"score_gpt":0.26216166514579553,"score_spread":0.24011772045298418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387969752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94635606,0.051206935,0.00006159962,0.0009544951,0.00020493372,0.00034786275,0.00069735997,0.00001680053,0.00015394008],"genre_scores_gemma":[0.98810494,0.0055715586,0.00003928131,0.00015175052,0.000049521626,0.0000031408215,0.00000776484,0.00001125584,0.006060778],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986806,0.00015014314,0.00026753818,0.00019364744,0.00045164666,0.00025640347],"domain_scores_gemma":[0.9988632,0.00010822489,0.00013275445,0.0006720559,0.00016761101,0.00005610583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040111938,0.00011804525,0.00025175992,0.000024658777,0.00027928062,0.0000044897656,0.00035240798,0.00008251432,0.000054095577],"category_scores_gemma":[0.00004207818,0.00007373878,0.00023918672,0.00039678227,0.0005942189,0.000015145536,0.00040581397,0.00010204475,0.000013336491],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007459322,0.00006862578,0.73808175,0.00006674583,0.00007047179,0.0000017747977,0.0011033659,0.00018716957,0.24632812,0.000013744921,0.0031863044,0.010146002],"study_design_scores_gemma":[0.00067195,0.00008591136,0.927331,0.000021436175,0.00006977482,0.0000026397151,0.0014785847,0.0001380997,0.027483806,0.00005214124,0.042592768,0.000071895556],"about_ca_topic_score_codex":0.000016479471,"about_ca_topic_score_gemma":0.000038150887,"teacher_disagreement_score":0.21884431,"about_ca_system_score_codex":0.000057922414,"about_ca_system_score_gemma":0.00016279702,"threshold_uncertainty_score":0.300698},"labels":[],"label_agreement":null},{"id":"W4388067974","doi":"10.14740/gr1662","title":"Gastrointestinal Mucormycosis: A Clinical Review","year":2023,"lang":"en","type":"review","venue":"Gastroenterology Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Mucormycosis; Medicine; Intensive care medicine; Dermatology; Pathology","score_opus":0.5764929309513748,"score_gpt":0.6144407669750027,"score_spread":0.037947836023627946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388067974","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000113694885,0.9953699,0.000030597694,0.0006462887,0.00019899571,0.002752832,0.00006423489,0.00018071155,0.0006427612],"genre_scores_gemma":[0.000009393304,0.9933881,0.00039795518,0.0006411484,0.000630332,0.0005195909,0.0002629386,0.00013010159,0.004020395],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99025625,0.0032859733,0.0021635843,0.0014114935,0.0011200027,0.0017626811],"domain_scores_gemma":[0.995243,0.0013287045,0.0003493511,0.0016721464,0.0007084558,0.0006983317],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.010568549,0.00054731127,0.004705449,0.0005772037,0.00017524295,0.000027730122,0.0007253664,0.0003282307,0.00050633104],"category_scores_gemma":[0.0055020317,0.00040420244,0.0018662891,0.0009918978,0.001128344,0.000049099242,0.0006496275,0.0049086087,0.005774187],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005934227,0.0006803476,0.07775881,0.31473598,0.0006352947,0.0033191307,0.000004443098,4.798577e-9,1.9759328e-7,0.00003152627,0.2114855,0.39075536],"study_design_scores_gemma":[0.0004837494,0.0020137683,0.0060378513,0.25584513,0.0010870587,0.0032621813,0.000015487865,0.0000014763311,1.0281542e-8,0.00002132839,0.7310915,0.00014043711],"about_ca_topic_score_codex":0.00001744518,"about_ca_topic_score_gemma":0.0000729633,"teacher_disagreement_score":0.519606,"about_ca_system_score_codex":0.00026931462,"about_ca_system_score_gemma":0.001328187,"threshold_uncertainty_score":0.999841},"labels":[],"label_agreement":null},{"id":"W4388211030","doi":"10.1016/j.jgar.2023.10.019","title":"Understanding fluconazole tolerance in Candida albicans: implications for effective treatment of candidiasis and combating invasive fungal infections","year":2023,"lang":"en","type":"review","venue":"Journal of Global Antimicrobial Resistance","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"National Key Research and Development Program of China; Shanghai Municipal Education Commission; National Natural Science Foundation of China","keywords":"Candida albicans; Fluconazole; Biology; Invasive candidiasis; Microbiology; Antifungal","score_opus":0.11072746554161148,"score_gpt":0.3782016591334582,"score_spread":0.26747419359184677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388211030","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.036383715,0.957283,0.00077786844,0.00037980961,0.0003301054,0.0029517112,0.0015643159,0.000021728372,0.0003077035],"genre_scores_gemma":[0.105783165,0.89343655,0.00036194074,0.000025759386,0.00016133083,0.000066657616,0.000028994622,0.000033914803,0.000101664395],"study_design_codex":"design_other","study_design_gemma":"systematic_review","domain_scores_codex":[0.9974877,0.00014797326,0.0014026501,0.00038985006,0.00019060042,0.00038120802],"domain_scores_gemma":[0.99673533,0.0011852056,0.0012909924,0.00025987183,0.00035393517,0.00017466302],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00039240028,0.00039931855,0.002512109,0.00022621815,0.0001701592,0.000041699106,0.00013438311,0.0002545691,0.0000037479701],"category_scores_gemma":[0.00066939666,0.00032090498,0.0007394475,0.0008894673,0.00022883537,0.0001425091,0.000030725896,0.00024999588,0.0000010102231],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01050871,0.0068675564,0.27860752,0.28089416,0.010969696,0.0009881945,0.002073479,0.00016366012,0.0028637985,0.0123280855,0.012122681,0.38161245],"study_design_scores_gemma":[0.028365301,0.009982324,0.24709405,0.39442095,0.018683368,0.002642304,0.002199513,0.000024881565,0.00054453785,0.005254411,0.2874085,0.0033798614],"about_ca_topic_score_codex":0.00018932924,"about_ca_topic_score_gemma":0.0111849625,"teacher_disagreement_score":0.3782326,"about_ca_system_score_codex":0.0030392325,"about_ca_system_score_gemma":0.0016148905,"threshold_uncertainty_score":0.9999243},"labels":[],"label_agreement":null},{"id":"W4388422699","doi":"10.1128/spectrum.02157-23","title":"Alternative oxidase promotes high iron tolerance in <i>Candida albicans</i>","year":2023,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; Audrey and Theodor Geisel School of Medicine at Dartmouth; National Institute of Dental and Craniofacial Research; Concordia University; Dartmouth College; American Heart Association; Temple University; National Institutes of Health; RTI International","keywords":"Alternative oxidase; Reactive oxygen species; Mitochondrion; Oxidative stress; Oxidase test; Candida albicans; Corpus albicans; Biology; NADPH oxidase; Oxidative phosphorylation; Cell biology; Respiratory chain; Oxygen; Electron transport chain; Biochemistry; Chemistry; Microbiology; Enzyme","score_opus":0.009905638907953485,"score_gpt":0.2558037137304937,"score_spread":0.24589807482254022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388422699","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938455,0.00019281477,0.0000361896,0.0041518738,0.00023228071,0.00038852467,0.00006507415,0.00011795273,0.00096975866],"genre_scores_gemma":[0.99557495,0.000101665784,0.00010397889,0.00080432993,0.00013184208,0.000021329904,0.00015573786,0.000018780285,0.0030874012],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99859744,0.00007502599,0.0002756201,0.00048422368,0.00005742751,0.0005102794],"domain_scores_gemma":[0.99944264,0.00007789435,0.000060179744,0.00032127515,0.000024354971,0.00007364873],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023554565,0.00017970894,0.00039870408,0.00014475861,0.000056460016,0.000007620839,0.00012636332,0.00013578459,0.00038523253],"category_scores_gemma":[0.00007018156,0.00015082654,0.000080523045,0.0004185518,0.00023181345,0.000045669534,0.000057932088,0.0003001335,0.00045489368],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046897138,0.0001716019,0.17895353,0.00007547021,0.000029997389,0.00041392772,0.00030584948,0.00001639047,0.8159354,0.00057673274,0.0025739884,0.0004781846],"study_design_scores_gemma":[0.0038803134,0.0008320117,0.7012885,0.0002430127,0.000041847605,0.00012336744,0.00022507542,0.0001706153,0.281528,0.003401647,0.0077970303,0.00046854737],"about_ca_topic_score_codex":0.0005636212,"about_ca_topic_score_gemma":0.0016263273,"teacher_disagreement_score":0.5344074,"about_ca_system_score_codex":0.00013039591,"about_ca_system_score_gemma":0.00007981062,"threshold_uncertainty_score":0.61505276},"labels":[],"label_agreement":null},{"id":"W4388507772","doi":"10.1016/s1245-1789(23)48527-7","title":"Infecciones fúngicas en pediatría","year":2023,"lang":"es","type":"article","venue":"EMC - Pediatría","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Humanities; Medicine; Philosophy","score_opus":0.017890587078306593,"score_gpt":0.3196939934202461,"score_spread":0.30180340634193953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388507772","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9720743,0.004706328,0.000049671715,0.004714751,0.0027212715,0.0007419312,0.0002251041,0.0007781173,0.013988543],"genre_scores_gemma":[0.95619994,0.011646421,0.00010383466,0.00054104556,0.010233921,0.000047712107,0.00027832927,0.00012134987,0.02082743],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99529773,0.00029795762,0.000928319,0.0010667868,0.001091687,0.0013175172],"domain_scores_gemma":[0.9967109,0.0009575521,0.0002494234,0.0012153644,0.00025247285,0.000614314],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0013596485,0.00063296926,0.0009519321,0.00043350196,0.000365913,0.00014225442,0.00043083963,0.00062975613,0.0030682762],"category_scores_gemma":[0.0015409646,0.00057948334,0.00056679593,0.0014223838,0.00024632632,0.00030528443,0.00035386352,0.0009100707,0.023322586],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033771506,0.00031449116,0.87322426,0.0012762327,0.00013429756,0.0004915183,0.0018437053,0.000014591537,0.00085156824,0.0018772499,0.11652131,0.0031130554],"study_design_scores_gemma":[0.0015136927,0.0005395675,0.8883842,0.00019460902,0.0006361072,0.000015652382,0.0017635012,0.00018691181,0.00015795582,0.0006095434,0.10530542,0.0006928416],"about_ca_topic_score_codex":0.0001301645,"about_ca_topic_score_gemma":0.00008089202,"teacher_disagreement_score":0.02025431,"about_ca_system_score_codex":0.00018804072,"about_ca_system_score_gemma":0.0006201605,"threshold_uncertainty_score":0.9996657},"labels":[],"label_agreement":null},{"id":"W4388563175","doi":"10.1371/journal.ppat.1011684","title":"Insights and advances in recurrent vulvovaginal candidiasis","year":2023,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"University of Manitoba; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Medicine; Incidence (geometry); Disease; Population; Epidemiology; Anxiety; Adverse effect; Vulvovaginal Candidiasis; Internal medicine; Antifungal; Environmental health; Dermatology; Psychiatry","score_opus":0.024608781242041886,"score_gpt":0.29281367101887945,"score_spread":0.26820488977683754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388563175","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930047,0.004265673,0.000006006855,0.00028403584,0.00006603169,0.00019029208,0.000015253291,0.00006508804,0.0021029226],"genre_scores_gemma":[0.99506,0.004446177,0.00010469384,0.00008615676,0.000058115755,0.00002057276,0.000021288755,0.000010010079,0.0001929701],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991497,0.00003173151,0.00016147674,0.00026246396,0.00019233041,0.00020234165],"domain_scores_gemma":[0.999601,0.000059260874,0.000025178993,0.00016992589,0.000039055816,0.00010556621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008715797,0.000096466116,0.00021618445,0.00012991368,0.000046283476,0.000009148184,0.00003300238,0.00004743272,0.000031582495],"category_scores_gemma":[0.00015887344,0.00007821608,0.000032918368,0.00038109714,0.00006073123,0.00010287736,0.000027455977,0.00012737158,0.000066778746],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030800267,0.00025033933,0.9079103,0.00042074634,0.000024950401,0.0006291987,0.0015011663,0.0000016434851,0.048492298,0.00045489633,0.00031063077,0.039695833],"study_design_scores_gemma":[0.0006656932,0.00022892153,0.9903193,0.00023879523,0.000042761472,0.0000061136425,0.0008045021,0.00028914656,0.00220637,0.00074069895,0.004319064,0.00013864414],"about_ca_topic_score_codex":0.0000081782,"about_ca_topic_score_gemma":0.00034804738,"teacher_disagreement_score":0.082408994,"about_ca_system_score_codex":0.000041874537,"about_ca_system_score_gemma":0.000052090276,"threshold_uncertainty_score":0.3189559},"labels":[],"label_agreement":null},{"id":"W4388627772","doi":"10.3390/jof9111104","title":"Genomic Epidemiology Identifies Azole Resistance Due to TR34/L98H in European Aspergillus fumigatus Causing COVID-19-Associated Pulmonary Aspergillosis","year":2023,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Environment Research Council; Wellcome; Canadian Institute for Advanced Research; Medical Research Council; Sight Research UK; Wellcome Trust","keywords":"Aspergillus fumigatus; Biology; Population; Microbiology; Genotype; Aspergillosis; Drug resistance; Virology; Genetics; Immunology; Gene; Medicine","score_opus":0.06224259294100916,"score_gpt":0.34232084504022653,"score_spread":0.2800782520992174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388627772","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98396695,0.004772005,0.0001960718,0.007214716,0.00056601653,0.0002629137,0.000032054995,0.00006931144,0.0029199587],"genre_scores_gemma":[0.9912744,0.0012505917,0.0003267317,0.0028028046,0.00033665067,0.0000033984118,0.000020892518,0.000051434192,0.0039330525],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9960405,0.0008648181,0.0015189134,0.00042932175,0.00044064317,0.0007058017],"domain_scores_gemma":[0.99703735,0.0010039511,0.0005835817,0.00041734223,0.00027612303,0.0006816788],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005765892,0.0002671542,0.0011038515,0.000647932,0.00019058023,0.000026153468,0.00024869316,0.0001648849,0.00015578707],"category_scores_gemma":[0.007605145,0.00023467938,0.00037712717,0.0011113529,0.00012481087,0.0001731341,0.00012634315,0.0006612011,0.00018520861],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032957974,0.0004255559,0.7840018,0.00045001647,0.00038085046,0.024531199,0.0020690158,0.0010000804,0.13990523,0.00020992702,0.03933678,0.0043937126],"study_design_scores_gemma":[0.0010516928,0.00019455484,0.9868888,0.00046858643,0.00011147672,0.00030227768,0.0009378372,0.0001398917,0.0003658961,0.0006924566,0.008612462,0.0002340202],"about_ca_topic_score_codex":0.00010237771,"about_ca_topic_score_gemma":0.0010359155,"teacher_disagreement_score":0.20288701,"about_ca_system_score_codex":0.0010381829,"about_ca_system_score_gemma":0.00045179497,"threshold_uncertainty_score":0.9569947},"labels":[],"label_agreement":null},{"id":"W4388823740","doi":"10.1099/acmi.0.000671.v3","title":"Radioimmunotherapy as a pathogen-agnostic treatment method for opportunistic mucormycosis infections","year":2023,"lang":"en","type":"preprint","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Radioimmunotherapy; Mucormycosis; Immune system; Immunosuppression; Antigen; Immunology; Pathogen; Immunotherapy; Pandemic; Biology; Medicine; Antibody; Coronavirus disease 2019 (COVID-19); Monoclonal antibody; Internal medicine; Disease; Infectious disease (medical specialty); Pathology","score_opus":0.10700547374903897,"score_gpt":0.4116309514000493,"score_spread":0.30462547765101033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388823740","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08556941,0.0016316425,0.8745377,0.005672394,0.0030527653,0.0122026885,0.0023651496,0.0018632623,0.013104992],"genre_scores_gemma":[0.5752334,0.019006658,0.12073562,0.0026415417,0.0013669387,0.008380952,0.005893076,0.00054043066,0.2662014],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997647,0.000111103385,0.00061481976,0.00090518413,0.00028052006,0.00044136567],"domain_scores_gemma":[0.99687153,0.0012445671,0.00018381083,0.0011747222,0.00026703507,0.00025834824],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005544143,0.00048753887,0.0010275911,0.00023448841,0.00019964832,0.000054420176,0.00012226128,0.00044274447,0.0008346739],"category_scores_gemma":[0.000924868,0.00038060523,0.00089196896,0.00018351291,0.00007374626,0.000027905216,0.00009661485,0.0003329079,0.00020593865],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01034347,0.019061103,0.16724539,0.011420051,0.020275561,0.0018818714,0.0057651517,0.00063752726,0.09875327,0.040429838,0.07162139,0.5525654],"study_design_scores_gemma":[0.033567574,0.036103193,0.29670885,0.005836056,0.021690609,0.00069507875,0.0035929007,0.04484929,0.010215358,0.12263792,0.41702616,0.0070770015],"about_ca_topic_score_codex":0.0017144945,"about_ca_topic_score_gemma":0.00047119852,"teacher_disagreement_score":0.75380206,"about_ca_system_score_codex":0.00064125855,"about_ca_system_score_gemma":0.001216515,"threshold_uncertainty_score":0.9998646},"labels":[],"label_agreement":null},{"id":"W4388833028","doi":"10.3390/cells12222655","title":"Molecular Mechanisms Associated with Antifungal Resistance in Pathogenic Candida Species","year":2023,"lang":"en","type":"review","venue":"Cells","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":154,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences North; Laurentian University; NOSM University","funders":"Natural Sciences and Engineering Research Council of Canada; Northern Ontario Heritage Fund Corporation; Northern Ontario Academic Medicine Association","keywords":"Anidulafungin; Echinocandin; Biology; Echinocandins; Caspofungin; Microbiology; Micafungin; Fluconazole; Candida glabrata; Posaconazole; Efflux; Itraconazole; Drug resistance; Amphotericin B; Genetics; Candida albicans; Antifungal","score_opus":0.04378568454129632,"score_gpt":0.30187722774892517,"score_spread":0.25809154320762884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388833028","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012637498,0.99228966,0.00009831341,0.000018531891,0.00019298453,0.001364647,0.00023380794,0.00013094732,0.0044073686],"genre_scores_gemma":[0.0014670637,0.9720519,0.00017342051,0.000057560028,0.0000542627,0.00006876914,0.0003327637,0.00014047837,0.025653778],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970241,0.00023171719,0.00072800554,0.00080330437,0.0006062767,0.0006065856],"domain_scores_gemma":[0.99837714,0.00024288222,0.00033073203,0.00076468295,0.00011317496,0.00017141113],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00062826864,0.0005308504,0.0023499776,0.000256425,0.00006288367,0.000036661335,0.00023960944,0.0004704984,0.00014153143],"category_scores_gemma":[0.00025436856,0.00039829113,0.00049408624,0.0011587035,0.00012561902,0.000039865452,0.000065734734,0.00072692643,0.00022341988],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027377699,0.0066243387,0.0035885181,0.57609653,0.011691794,0.13509636,0.0020246445,0.00001606531,0.024763227,0.018910084,0.045810148,0.17264052],"study_design_scores_gemma":[0.0024483476,0.0004919058,0.0034292082,0.15680264,0.0040230756,0.000027433003,0.0002294407,0.0000052894925,0.0012041805,0.00081543205,0.8284537,0.0020693478],"about_ca_topic_score_codex":0.000014892285,"about_ca_topic_score_gemma":0.001317638,"teacher_disagreement_score":0.78264356,"about_ca_system_score_codex":0.0005204754,"about_ca_system_score_gemma":0.0008277768,"threshold_uncertainty_score":0.9998469},"labels":[],"label_agreement":null},{"id":"W4389029721","doi":"10.1093/ofid/ofad500.1532","title":"1699. Safety and Outcomes of Isavuconazonium Sulfate for the Treatment of Invasive Aspergillosis or Invasive Mucormycosis in Pediatric Patients","year":2023,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Janssen Biotech; Genentech; National Institutes of Health; Basilea Pharmaceutica; Astellas Pharma; Sanofi; Nabriva Therapeutics; Moderna; Sanofi Pasteur; Amplyx; KU Leuven; Jazz Pharmaceuticals; Gilead Sciences; Pfizer; Melinta Therapeutics; Astellas Pharma Global Development; AstraZeneca; Eli Lilly and Company","keywords":"Medicine; Aspergillosis; Adverse effect; Mucormycosis; Incidence (geometry); Case fatality rate; Population; Neutropenia; Internal medicine; Surgery; Pediatrics; Toxicity; Epidemiology","score_opus":0.021664028581867095,"score_gpt":0.3032928494492307,"score_spread":0.28162882086736357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389029721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99541634,0.000430356,0.00000573825,0.00042087908,0.00010623065,0.002515517,0.00065175956,0.000022476945,0.00043069798],"genre_scores_gemma":[0.98821986,0.010729896,0.000012075916,0.00013321172,0.000017634136,0.00026420347,0.000114109214,0.000021569838,0.00048742356],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986702,0.00005041783,0.0004910405,0.00030765103,0.00019702049,0.0002836785],"domain_scores_gemma":[0.9970616,0.0020698062,0.00021292845,0.00034196276,0.00020321716,0.000110494875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012568643,0.0001982435,0.000636143,0.00015950916,0.00014576886,0.000021247983,0.00013651546,0.00006379495,0.0000637828],"category_scores_gemma":[0.00123662,0.00011496367,0.00020543196,0.00048997015,0.00012225375,0.00015404049,0.00011958765,0.000039908307,0.0000063411912],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019899406,0.0012549288,0.99227244,0.00032627027,0.00020765835,0.0000051810507,0.00026778065,0.0000111266045,0.000020705946,0.00013254725,0.00047912626,0.003032325],"study_design_scores_gemma":[0.005273862,0.002196901,0.9900617,0.000061511964,0.00049932004,4.988507e-7,0.00075776,0.00001457326,0.00058611453,0.00025601874,0.00017278705,0.00011893366],"about_ca_topic_score_codex":0.0008767552,"about_ca_topic_score_gemma":0.0097048255,"teacher_disagreement_score":0.01029954,"about_ca_system_score_codex":0.00013125369,"about_ca_system_score_gemma":0.0003446833,"threshold_uncertainty_score":0.54155207},"labels":[],"label_agreement":null},{"id":"W4389082088","doi":"10.1128/mbio.02183-23","title":"DYRK-family kinases regulate <i>Candida albicans</i> morphogenesis and virulence through the Ras1/PKA pathway","year":2023,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Government of Canada; National Institutes of Health; W. Garfield Weston Foundation; Canadian Institute for Advanced Research","keywords":"Candida albicans; Filamentation; Biology; Virulence; Corpus albicans; Morphogenesis; Fungal protein; Microbiology; Mutant; Cell biology; Biofilm; Kinase; Genetics; Gene; Bacteria","score_opus":0.026290588845947892,"score_gpt":0.2719693546517663,"score_spread":0.2456787658058184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389082088","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99107,0.0019227572,0.00007222742,0.0023963335,0.00014980552,0.0003228725,0.000051482348,0.00014953493,0.003865011],"genre_scores_gemma":[0.99014723,0.0012969046,0.000104394945,0.0021743386,0.00012130877,0.00002588604,0.000024799641,0.000024242472,0.006080887],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985992,0.0000647747,0.00023649675,0.00041021546,0.00033004425,0.0003592805],"domain_scores_gemma":[0.9990118,0.00017546561,0.000058300666,0.0005860165,0.00006736561,0.000101038044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031431523,0.0001784882,0.0002871501,0.00003398263,0.0002435064,0.000033495948,0.00013732846,0.00008915257,0.000116997806],"category_scores_gemma":[0.00014008848,0.00011555799,0.000102448495,0.00043361363,0.00034627537,0.0000931148,0.00008714296,0.00014780297,0.00015880232],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010164691,0.00023792812,0.26611945,0.00047196395,0.00021569722,0.0006037325,0.002186431,0.000014539693,0.62360036,0.00167078,0.07056423,0.033298388],"study_design_scores_gemma":[0.0008936046,0.00021303301,0.894137,0.00017798014,0.000105476545,0.000025581588,0.0012977914,0.000100772435,0.033759043,0.0013652487,0.06766389,0.00026053793],"about_ca_topic_score_codex":0.00048226214,"about_ca_topic_score_gemma":0.000139477,"teacher_disagreement_score":0.6280176,"about_ca_system_score_codex":0.000036946516,"about_ca_system_score_gemma":0.00009668517,"threshold_uncertainty_score":0.4712318},"labels":[],"label_agreement":null},{"id":"W4389223246","doi":"10.1128/mbio.02745-23","title":"Respiration supports intraphagosomal filamentation and escape of <i>Candida albicans</i> from macrophages","year":2023,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Western University; Hospital for Sick Children; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Government of Canada","keywords":"Candida albicans; Filamentation; Corpus albicans; Biology; Phagosome; Microbiology; Cell biology; Immune system; Phagocytosis; Genetics","score_opus":0.01241547552006161,"score_gpt":0.27958892675207986,"score_spread":0.26717345123201824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389223246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99847776,0.00018108309,0.000039130908,0.0003663857,0.000068192596,0.00016094894,0.000053985215,0.00004217176,0.00061035797],"genre_scores_gemma":[0.9986026,0.00009259314,0.0001874802,0.00021331209,0.000057220455,0.0000054845127,0.00019577764,0.000007694841,0.0006377891],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99932563,0.000018042594,0.00019299742,0.00018403327,0.0001672506,0.00011201771],"domain_scores_gemma":[0.9996471,0.00005173674,0.000054450185,0.00015121441,0.000040462903,0.00005505171],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012632889,0.000067794535,0.00015576692,0.000055034638,0.000036585134,0.000009577468,0.000024183953,0.000051416657,0.0003803391],"category_scores_gemma":[0.00005444094,0.000060167025,0.00003541073,0.00017157274,0.00007742889,0.0000649665,0.000016293447,0.000056478104,0.000021762886],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028618428,0.00004584034,0.5618548,0.00007897493,0.000029206483,0.00004327831,0.00064324227,5.312802e-7,0.42006293,0.000060585313,0.0033168474,0.0135775665],"study_design_scores_gemma":[0.0006029612,0.00017235281,0.91597563,0.00004312765,0.000040049334,0.0000016099749,0.00041220462,0.000059693946,0.08166746,0.0002684677,0.00070235017,0.000054103133],"about_ca_topic_score_codex":0.00025352024,"about_ca_topic_score_gemma":0.00015955584,"teacher_disagreement_score":0.35412082,"about_ca_system_score_codex":0.000015144823,"about_ca_system_score_gemma":0.000037241887,"threshold_uncertainty_score":0.41644466},"labels":[],"label_agreement":null},{"id":"W4389292156","doi":"10.20944/preprints202310.0546.v2","title":"Descriptive View on Candida Auris Occurrence in a Tertiary Health Institution in Riyadh, Saudi Arabia","year":2023,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"College of Medicine, King Saud University; King Saud University","keywords":"Candida auris; Medicine; Epidemiology; Pediatrics; Emergency medicine; Internal medicine; Antifungal; Dermatology","score_opus":0.18202857049873095,"score_gpt":0.39799994535342514,"score_spread":0.2159713748546942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389292156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922972,0.0007040707,0.000095035364,0.0022295278,0.0007392454,0.0021501994,0.00012100549,0.00017573293,0.0014880182],"genre_scores_gemma":[0.99521816,0.0028102973,0.00006423321,0.0007814966,0.000090776746,0.00032473178,0.00019160232,0.000031241063,0.00048744725],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9955758,0.00040262053,0.0011248668,0.0016338335,0.000578109,0.0006848091],"domain_scores_gemma":[0.9976933,0.00011882811,0.0003558289,0.0014386848,0.00011971372,0.00027365316],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0020260084,0.00048057595,0.0010885878,0.0005120118,0.000085596505,0.000015403775,0.00037185726,0.00042729607,0.00019241346],"category_scores_gemma":[0.0012021887,0.00047164448,0.00023150208,0.0005305951,0.0002178529,0.00010727145,0.00072208064,0.0023238608,0.0010510213],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005241575,0.0005034576,0.991348,0.0017027499,0.000040563667,0.0002036869,0.0023601085,0.00017045291,0.00031425036,0.000085272026,0.00022889393,0.0025183582],"study_design_scores_gemma":[0.0009081565,0.000083192506,0.98923165,0.006763692,0.000025185678,0.0000047273384,0.0002623881,0.00011217863,0.00074869115,0.0009359766,0.00058874657,0.00033539484],"about_ca_topic_score_codex":0.010292257,"about_ca_topic_score_gemma":0.012973929,"teacher_disagreement_score":0.0050609424,"about_ca_system_score_codex":0.0021667616,"about_ca_system_score_gemma":0.0018784987,"threshold_uncertainty_score":0.9999778},"labels":[],"label_agreement":null},{"id":"W4389311434","doi":"10.3390/microorganisms11122915","title":"Carvacrol-Induced Vacuole Dysfunction and Morphological Consequences in Nakaseomyces glabratus and Candida albicans","year":2023,"lang":"en","type":"article","venue":"Microorganisms","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation; University of Regina","keywords":"Carvacrol; Candida albicans; Hypha; Vacuole; Corpus albicans; Microbiology; Biology; Germ tube; Biofilm; Cell biology; Bacteria; Cytoplasm; Antimicrobial","score_opus":0.020666775952499147,"score_gpt":0.27067880025527313,"score_spread":0.25001202430277397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389311434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973652,0.00043618894,0.000010034106,0.0014592846,0.00008366543,0.00023467578,0.00001835947,0.000088109744,0.00030450642],"genre_scores_gemma":[0.9984894,0.0002549479,0.00010364036,0.0003657641,0.000036554382,0.000006070849,0.000025470716,0.000012630767,0.00070555176],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99894756,0.00005085381,0.00020225761,0.0003860885,0.00013078409,0.00028242872],"domain_scores_gemma":[0.99956465,0.00007876232,0.000035975463,0.00015663175,0.000037749236,0.00012621914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002588279,0.00014180515,0.0002817619,0.00009517146,0.00010359098,0.000033718134,0.000042730408,0.00013884838,0.00015955439],"category_scores_gemma":[0.00012299005,0.00011303658,0.00002664039,0.00033770967,0.0002493616,0.00006801172,0.000050943814,0.00019117769,0.000039232007],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014153928,0.000027251872,0.20522755,0.00005050668,0.000011486994,0.0003577709,0.00031968867,1.8524189e-7,0.792394,0.0000551334,0.00041356042,0.0010013259],"study_design_scores_gemma":[0.0013399117,0.0004637336,0.8803414,0.000066998015,0.00003766221,0.00021865338,0.0019254362,0.00003181375,0.11431355,0.00051827467,0.0005661146,0.00017646325],"about_ca_topic_score_codex":0.00088943256,"about_ca_topic_score_gemma":0.0010766387,"teacher_disagreement_score":0.67808044,"about_ca_system_score_codex":0.00005529747,"about_ca_system_score_gemma":0.00010082383,"threshold_uncertainty_score":0.46094978},"labels":[],"label_agreement":null},{"id":"W4389365395","doi":"10.7554/elife.81406.sa2","title":"Author response: Candida albicans exhibits heterogeneous and adaptive cytoprotective responses to antifungal compounds","year":2023,"lang":"en","type":"peer-review","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Candida albicans; Transcriptome; Downregulation and upregulation; Biology; Ribosomal protein; Fluconazole; Ribosome; Corpus albicans; Gene; Cell; Antifungal drug; Fight-or-flight response; Cell biology; Computational biology; Gene expression; Antifungal; Genetics; Microbiology; RNA","score_opus":0.07539237338526536,"score_gpt":0.3710645452993528,"score_spread":0.29567217191408746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389365395","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47378197,0.070466675,0.0013586583,0.39644903,0.005120494,0.022304587,0.012004431,0.0022268312,0.016287342],"genre_scores_gemma":[0.15556154,0.0012290266,0.00068186846,0.005972192,0.0003732877,0.00033138302,0.00024216666,0.00017958423,0.83542895],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9941754,0.0009127892,0.00095955544,0.0017707092,0.0012664987,0.00091504375],"domain_scores_gemma":[0.9952607,0.001492866,0.00026329202,0.0013193948,0.00081217475,0.00085157756],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0025058757,0.00089126185,0.0022237215,0.0005483267,0.0003290176,0.000076486554,0.0003074658,0.0006528779,0.00087626395],"category_scores_gemma":[0.0041648904,0.0007355201,0.0004590789,0.00091358734,0.00038064353,0.000072548995,0.00037861144,0.0011899286,0.00037258244],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.023355357,0.00013795753,0.00081510964,0.0026715123,0.00047973232,0.0016246507,0.000269295,8.013303e-7,0.0026401188,0.000023609653,0.96500957,0.002972257],"study_design_scores_gemma":[0.0012902181,0.004105072,0.055692945,0.012835422,0.00094007637,0.00057403406,0.00038591708,0.000032543325,0.0015942064,0.000071721246,0.92119384,0.0012839942],"about_ca_topic_score_codex":0.001407674,"about_ca_topic_score_gemma":0.0040766657,"teacher_disagreement_score":0.8191416,"about_ca_system_score_codex":0.0006195509,"about_ca_system_score_gemma":0.0015819406,"threshold_uncertainty_score":0.9995096},"labels":[],"label_agreement":null},{"id":"W4389420544","doi":"10.1099/acmi.0.000671.v4","title":"Radioimmunotherapy as a pathogen-agnostic treatment method for opportunistic mucormycosis infections","year":2023,"lang":"en","type":"article","venue":"Access Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"David Geffen School of Medicine, University of California, Los Angeles","keywords":"Radioimmunotherapy; Mucormycosis; Immune system; Antigen; Immunosuppression; Immunology; Pandemic; Pathogen; Medicine; Biology; Antibody; Disease; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Monoclonal antibody; Internal medicine; Pathology","score_opus":0.06573955586422704,"score_gpt":0.41464776949985876,"score_spread":0.34890821363563174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389420544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97165877,0.00054702396,0.02105168,0.002134397,0.0006647715,0.0019553492,0.0006015561,0.00037240994,0.001014016],"genre_scores_gemma":[0.98576516,0.0020575884,0.0018695627,0.0015172407,0.00016601066,0.00055269303,0.0015873389,0.00004944958,0.006434973],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987179,0.00009927896,0.00031061488,0.00043340313,0.000035955385,0.0004028655],"domain_scores_gemma":[0.9984756,0.00080836564,0.000088330926,0.0004127416,0.00011741461,0.00009753133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028050639,0.00020202658,0.0004675821,0.00017882892,0.00019432497,0.00002369677,0.00012598073,0.00017009303,0.00041773825],"category_scores_gemma":[0.00037693456,0.0001576034,0.00024519712,0.0003521996,0.000100308534,0.000060381095,0.000041042007,0.000088915105,0.00020112781],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058796175,0.0004818957,0.044409156,0.000101253965,0.00040436152,0.0000731312,0.00021513499,0.000006019991,0.916883,0.0008734068,0.0064583016,0.029506376],"study_design_scores_gemma":[0.01400319,0.011506569,0.18517986,0.00024891095,0.0016481401,0.0011885334,0.0005358106,0.0009508391,0.06705063,0.005283386,0.7111247,0.0012794053],"about_ca_topic_score_codex":0.00027325941,"about_ca_topic_score_gemma":0.00014485094,"teacher_disagreement_score":0.84983236,"about_ca_system_score_codex":0.00016054559,"about_ca_system_score_gemma":0.0002629523,"threshold_uncertainty_score":0.64268804},"labels":[],"label_agreement":null},{"id":"W4389515731","doi":"10.1101/2023.12.07.569977","title":"Functional genetic characterization of stress tolerance and biofilm formation in <i>Nakaseomyces glabrata</i> via a novel CRISPR activation system","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; CRISPR; Gene; Phenotype; Candida glabrata; Gene duplication; Genetics; RNA interference; Computational biology; RNA","score_opus":0.019641159955503015,"score_gpt":0.22396966966675322,"score_spread":0.20432850971125022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389515731","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95665145,0.00014041158,0.041216776,0.0001360857,0.0003740565,0.0009175012,0.00040558178,0.0001564028,0.0000017497343],"genre_scores_gemma":[0.9982605,0.00016381862,0.0010929896,0.000055262542,0.00021720865,0.00013652541,0.000013849463,0.000054882104,0.000004994595],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99787426,0.000066642155,0.0007392406,0.0006276348,0.00042575438,0.00026645456],"domain_scores_gemma":[0.99824,0.00005175975,0.00053074275,0.0005701633,0.0004936377,0.00011369228],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00033797915,0.000317812,0.00056423445,0.00033295085,0.00007381879,0.000055603883,0.00011063323,0.00037424132,0.000007254397],"category_scores_gemma":[0.00011419167,0.0003314347,0.0000774273,0.0005142169,0.0000844259,0.00028242802,0.000118899305,0.00037099604,0.000008805568],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021424923,0.00013067099,0.09206529,0.0041869306,0.000037991613,0.000010883735,0.000017470056,0.000059023056,0.9031833,0.00007808904,0.00001079572,0.0000053120257],"study_design_scores_gemma":[0.00053818454,0.000035119603,0.634715,0.0016687786,0.00004827206,4.17004e-8,0.000011199107,0.0041187676,0.3586714,3.1325828e-7,0.000017932516,0.00017496923],"about_ca_topic_score_codex":0.0001049162,"about_ca_topic_score_gemma":0.000013985673,"teacher_disagreement_score":0.5445119,"about_ca_system_score_codex":0.00028541597,"about_ca_system_score_gemma":0.0002512489,"threshold_uncertainty_score":0.99991375},"labels":[],"label_agreement":null},{"id":"W4389624353","doi":"10.3390/healthcare11243150","title":"Description of Candida auris Occurrence in a Tertiary Health Institution in Riyadh, Saudi Arabia","year":2023,"lang":"en","type":"article","venue":"Healthcare","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"College of Medicine, King Saud University; King Saud University","keywords":"Candida auris; Medicine; Epidemiology; Pediatrics; Emergency medicine; Internal medicine; Antifungal; Dermatology","score_opus":0.0570409896893461,"score_gpt":0.3519175626744508,"score_spread":0.29487657298510467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389624353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916047,0.0013044099,0.000032958927,0.0061447932,0.00016008648,0.0005462129,0.000057196,0.000049040147,0.00010060153],"genre_scores_gemma":[0.9978426,0.0011367266,0.00006520389,0.00071690464,0.000028166505,0.0000274986,0.00011788632,0.0000057316897,0.000059246955],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99848145,0.000102726925,0.0005266021,0.00028429294,0.0002471178,0.00035782132],"domain_scores_gemma":[0.9994012,0.00003439203,0.00010317705,0.00025076087,0.00007381224,0.00013667563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006816041,0.00010067255,0.0003362062,0.00030427048,0.000048492195,0.0000037513375,0.000051779192,0.00009863816,0.0000143986845],"category_scores_gemma":[0.0001892099,0.00009586419,0.000046322875,0.0008953034,0.00007177383,0.00010021463,0.000021340134,0.00029676844,0.000021854012],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001851955,0.000077210134,0.98337746,0.001575413,0.0000019333702,0.0000390153,0.0012929236,0.0000066565235,0.00033898806,0.00012626404,0.00090737344,0.012071584],"study_design_scores_gemma":[0.0006531345,0.00017903835,0.9963885,0.0011695279,0.0000021352623,0.000004039464,0.0007474297,0.00021334762,0.00008514978,0.00021709067,0.00027588956,0.000064736836],"about_ca_topic_score_codex":0.015213674,"about_ca_topic_score_gemma":0.055516317,"teacher_disagreement_score":0.040302645,"about_ca_system_score_codex":0.00049643836,"about_ca_system_score_gemma":0.0009014096,"threshold_uncertainty_score":0.9913441},"labels":[],"label_agreement":null},{"id":"W4389722595","doi":"10.1101/2023.12.13.571438","title":"Most azole antifungal resistance mutations in the drug target provide cross-resistance and carry no intrinsic fitness cost","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; University of Guelph; PROTEO","funders":"","keywords":"Azole; Drug resistance; Biology; Candida albicans; Mutation; Genetics; Drug; Resistance (ecology); Amino acid; Antifungal drugs; Antifungal; Computational biology; Microbiology; Pharmacology; Gene; Ecology","score_opus":0.01831038777538305,"score_gpt":0.2689741549978018,"score_spread":0.25066376722241873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389722595","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892221,0.0034210759,0.00021182018,0.0017342548,0.00093804125,0.002917972,0.0010134142,0.00038051038,0.00016080057],"genre_scores_gemma":[0.99494994,0.00051124574,0.0020297477,0.0005305835,0.0004819384,0.00062657165,0.00000803939,0.00015676736,0.0007051938],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9952725,0.00032571654,0.001027244,0.0016158525,0.00087642827,0.0008822478],"domain_scores_gemma":[0.99557835,0.00045438894,0.00045961147,0.0020273004,0.0011755184,0.00030485218],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019048827,0.0007187433,0.0009997004,0.00031458604,0.00044775842,0.0004283507,0.00066129887,0.00049928227,0.000038534316],"category_scores_gemma":[0.001999153,0.0006350096,0.00017356708,0.0013411269,0.0007399789,0.00027680147,0.00038212386,0.0017239089,0.00010021731],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001302463,0.00062562467,0.90364105,0.007272757,0.00027656872,0.0014352808,0.0003129299,0.00006575881,0.068554096,0.0023336841,0.014175977,0.0000038280514],"study_design_scores_gemma":[0.0012934371,0.000026867887,0.9738328,0.0016893132,0.00014337187,5.094606e-8,0.000064608204,0.00008538717,0.009409219,0.00003187506,0.0127034355,0.0007196717],"about_ca_topic_score_codex":0.00017434395,"about_ca_topic_score_gemma":0.0007162764,"teacher_disagreement_score":0.07019173,"about_ca_system_score_codex":0.0004603161,"about_ca_system_score_gemma":0.0016077315,"threshold_uncertainty_score":0.9996101},"labels":[],"label_agreement":null},{"id":"W4389791812","doi":"10.3389/ti.2023.11845","title":"Isavuconazole for Treating Invasive Mould Disease in Solid Organ Transplant Recipients","year":2023,"lang":"en","type":"article","venue":"Transplant International","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Infectious Diseases Centre; University Health Network","funders":"","keywords":"Posaconazole; Medicine; Voriconazole; Adverse effect; Discontinuation; Tacrolimus; Internal medicine; Therapeutic drug monitoring; Itraconazole; Drug; Organ transplantation; Aspergillosis; Azole; Pharmacology; Broad spectrum; Everolimus; Intensive care medicine; Transplantation; Antifungal; Immunology; Dermatology","score_opus":0.03213439206712776,"score_gpt":0.3242839929525751,"score_spread":0.29214960088544734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389791812","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99413943,0.000031346823,0.00081821467,0.0018952305,0.00030175142,0.00045915984,0.0012071927,0.000091078255,0.0010566042],"genre_scores_gemma":[0.9949278,0.00032188508,0.0001307862,0.00026500583,0.00014003394,0.000081562044,0.0018939183,0.000021872216,0.0022171154],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986726,0.00001940308,0.00035548134,0.0003303276,0.00033475365,0.00028745327],"domain_scores_gemma":[0.99935406,0.00022010985,0.000045514655,0.0001422631,0.00008690772,0.00015114393],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020032043,0.0001480662,0.00022469313,0.00019070275,0.0000584963,0.00001678661,0.00013894832,0.00006761367,0.00023463657],"category_scores_gemma":[0.000095036245,0.00013330017,0.00014265048,0.00017373268,0.00004251188,0.00010419568,0.0000073126844,0.00014124317,0.00007824152],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003123108,0.00024686626,0.9720196,0.00020486237,0.000094016585,0.00036404046,0.001582254,0.00011687866,0.020144867,0.000663957,0.00032892087,0.001110611],"study_design_scores_gemma":[0.003332177,0.000104226485,0.98101336,0.0009507097,0.00008944795,0.0000133364,0.00013817885,0.0044934,0.008599932,0.00065261475,0.0004141306,0.00019849499],"about_ca_topic_score_codex":0.00005616518,"about_ca_topic_score_gemma":0.00043128536,"teacher_disagreement_score":0.0115449345,"about_ca_system_score_codex":0.0001009562,"about_ca_system_score_gemma":0.00014057782,"threshold_uncertainty_score":0.5435823},"labels":[],"label_agreement":null},{"id":"W4389950736","doi":"10.1128/jcm.01161-23","title":"First Canadian report of transmission of fluconazole-resistant <i>Candida parapsilosis</i> within two hospital networks confirmed by genomic analysis","year":2023,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada; Sinai Health System; University Health Network; University of Toronto; Public Health Ontario","funders":"Public Health Ontario; Public Health Agency; Public Health Agency of Canada","keywords":"Candida parapsilosis; Outbreak; Biology; Fluconazole; Genotyping; Microbiology; Drug resistance; Typing; Molecular epidemiology; Virology; Candida albicans; Antifungal; Genetics; Gene; Genotype","score_opus":0.02043619914617155,"score_gpt":0.3338348680147918,"score_spread":0.3133986688686202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389950736","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99572426,0.0010546792,0.00054431515,0.0017628978,0.00046879126,0.00019762089,0.00012112999,0.000007902765,0.000118427175],"genre_scores_gemma":[0.9980561,0.00078461133,0.00035859118,0.00027235606,0.00014085486,0.0000012010331,0.0001230187,0.000015635434,0.0002475926],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99552095,0.00023173298,0.003428236,0.00031459442,0.00013497578,0.0003695142],"domain_scores_gemma":[0.9960912,0.0006999164,0.0018789367,0.00037945897,0.00047732858,0.00047314767],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028572085,0.00018844764,0.001881478,0.00031333521,0.000059983486,0.000005167916,0.00023368692,0.00036021933,0.00017585847],"category_scores_gemma":[0.00066323095,0.000139885,0.001090465,0.00064581353,0.0005175941,0.000039248265,0.000024723158,0.00059607916,0.0000037997552],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034003584,0.00045828265,0.8452367,0.00012451241,0.002822482,0.000741493,0.00017024735,0.0006329928,0.1306499,0.000024073692,0.01499921,0.00073972554],"study_design_scores_gemma":[0.007091643,0.0041638496,0.9456379,0.0004801383,0.003954009,0.00033779698,0.00037584195,0.00093989307,0.0071130395,0.00011861274,0.029391656,0.0003956104],"about_ca_topic_score_codex":0.0034514598,"about_ca_topic_score_gemma":0.011276946,"teacher_disagreement_score":0.123536855,"about_ca_system_score_codex":0.00007590697,"about_ca_system_score_gemma":0.00095991086,"threshold_uncertainty_score":0.62928003},"labels":[],"label_agreement":null},{"id":"W4390120279","doi":"10.1093/mmy/myad134","title":"Machine learning to identify clinically relevant <i>Candida</i> yeast species","year":2023,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canada Foundation for Innovation; Government of Alberta","keywords":"Candida albicans; Budding yeast; Candida glabrata; Yeast; Biology; Corpus albicans; Candida auris; Convolutional neural network; Artificial intelligence; Microbiology; Candida infections; Antifungal; Saccharomyces cerevisiae; Computer science; Biochemistry","score_opus":0.030598132909327724,"score_gpt":0.3647091864544804,"score_spread":0.3341110535451527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390120279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96367836,0.00015081181,0.0004694248,0.020808376,0.0007716865,0.0003394314,0.000013013837,0.00034863723,0.013420256],"genre_scores_gemma":[0.97399724,0.00057722675,0.0001978553,0.005441222,0.0005107522,0.000024036653,0.000060617345,0.00002526274,0.019165797],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99745667,0.00019047968,0.00059578073,0.00046941914,0.00074488897,0.0005427387],"domain_scores_gemma":[0.9982034,0.0006455869,0.0000676968,0.00032119628,0.000099268065,0.0006628643],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0017371238,0.00015322353,0.00054634444,0.00014822319,0.000121577104,0.0000125548795,0.00020623005,0.00029356807,0.0050499276],"category_scores_gemma":[0.011288951,0.00012017417,0.00015479066,0.00056814903,0.00027442648,0.000027311835,0.00021760997,0.0008143298,0.004312271],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015318664,0.00033605966,0.8630625,0.00018968545,0.000113800736,0.0029010975,0.00058165274,0.0000059060026,0.019075342,0.0010035785,0.08781153,0.023386957],"study_design_scores_gemma":[0.0010621187,0.0009078528,0.7080138,0.00010260605,0.000045024633,0.000057506873,0.00026173762,0.0003253028,0.00012489276,0.0002665138,0.28869933,0.00013331385],"about_ca_topic_score_codex":0.00004547817,"about_ca_topic_score_gemma":0.00017087559,"teacher_disagreement_score":0.2008878,"about_ca_system_score_codex":0.00006469442,"about_ca_system_score_gemma":0.00026298204,"threshold_uncertainty_score":0.9970394},"labels":[],"label_agreement":null},{"id":"W4390578078","doi":"10.1016/s2213-2600(23)00408-3","title":"Risk factors for COVID-19-associated pulmonary aspergillosis: a systematic review and meta-analysis","year":2024,"lang":"en","type":"review","venue":"The Lancet Respiratory Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Coronavirus disease 2019 (COVID-19); Meta-analysis; 2019-20 coronavirus outbreak; Aspergillosis; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Pulmonary aspergillosis; MEDLINE; Betacoronavirus; Coronavirus Infections; Intensive care medicine; Internal medicine; Virology; Immunology; Disease; Infectious disease (medical specialty)","score_opus":0.28470622056896133,"score_gpt":0.447805812867719,"score_spread":0.16309959229875765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390578078","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000040953546,0.98682356,0.00004503335,0.0033355642,0.00008827567,0.008166588,0.001079086,0.00018817301,0.00026962737],"genre_scores_gemma":[0.00015052615,0.9856088,0.00000889604,0.009273811,0.000383079,0.0017759552,0.00033338508,0.00009990328,0.0023656434],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99323577,0.0019402297,0.0022608612,0.0011131888,0.00084805285,0.00060189475],"domain_scores_gemma":[0.99239475,0.0031743434,0.0014664116,0.0021833112,0.0002365785,0.00054460706],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.008836123,0.0010205661,0.02161758,0.000424715,0.0003047529,0.00003405752,0.0005670922,0.0004322399,0.00040858766],"category_scores_gemma":[0.015386403,0.0004072671,0.004374477,0.001937245,0.00049379125,0.000051447987,0.00012575374,0.0011466993,0.000033910535],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020759559,0.00003860617,0.00004317412,0.79700315,0.18561307,0.00005070474,0.000089715126,9.10247e-8,1.12085026e-7,0.00007104541,0.016832804,0.0002367556],"study_design_scores_gemma":[0.00019177944,0.00015985912,0.00001810047,0.047966644,0.69058853,0.000014834635,0.00008669364,0.0000035674434,3.3292867e-8,0.00005825128,0.2606605,0.00025120535],"about_ca_topic_score_codex":0.000089347064,"about_ca_topic_score_gemma":0.00012343137,"teacher_disagreement_score":0.7490365,"about_ca_system_score_codex":0.00043363072,"about_ca_system_score_gemma":0.0005759034,"threshold_uncertainty_score":0.99983793},"labels":[],"label_agreement":null},{"id":"W4390690570","doi":"10.1093/ofid/ofae017","title":"Verification, Analytical Sensitivity, Cost-effectiveness, and Comparison of 4 <i>Candida auris</i> Screening Methods","year":2024,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"North York General Hospital; Sunnybrook Hospital; University of Toronto; McMaster University; Impact","funders":"","keywords":"Candida auris; Medicine; Sensitivity (control systems); Medical physics; Dermatology; Antifungal","score_opus":0.048917724066179814,"score_gpt":0.4347314779007449,"score_spread":0.38581375383456507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390690570","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9011852,0.0047128727,0.07800864,0.00055332494,0.0002131232,0.001982316,0.00014648498,0.00018644716,0.01301157],"genre_scores_gemma":[0.99880195,0.00006943255,0.00072656706,0.000118647615,0.00003212251,0.000047301564,0.000049508824,0.00002152392,0.00013295774],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99866146,0.00024599663,0.00028369972,0.00040680167,0.00018563968,0.00021641211],"domain_scores_gemma":[0.99858606,0.00072603364,0.000060476654,0.00030033913,0.00013414121,0.00019293888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066801626,0.0001587798,0.00053341745,0.00009224404,0.00018008714,0.00013942005,0.0000624493,0.000073152536,0.0000799935],"category_scores_gemma":[0.0004535671,0.00013588138,0.00013081604,0.00033551583,0.00031369546,0.00024839284,0.00015461055,0.0001641419,0.000009342429],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038773895,0.0003211453,0.9213072,0.00045091985,0.0001833166,0.000023747367,0.000042562187,0.000016933758,0.0018177002,0.0049118064,0.0018979814,0.06863893],"study_design_scores_gemma":[0.0008388778,0.00038158754,0.97788316,0.00049608614,0.00055108237,0.00003175516,0.00024763038,0.009610925,0.0034968718,0.001456193,0.004817818,0.00018798867],"about_ca_topic_score_codex":0.00033266033,"about_ca_topic_score_gemma":0.00012949624,"teacher_disagreement_score":0.09761671,"about_ca_system_score_codex":0.00008294673,"about_ca_system_score_gemma":0.00019416926,"threshold_uncertainty_score":0.5541082},"labels":[],"label_agreement":null},{"id":"W4390740053","doi":"10.1128/aac.01132-23","title":"<i>In vitro</i> activity of manogepix and comparators against infrequently encountered yeast and mold isolates from the SENTRY Surveillance Program (2017–2022)","year":2024,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"bioMérieux; Idorsia Pharmaceuticals; TenNor Therapeutics; Astellas Foundation for Research on Metabolic Disorders; Shionogi; Basilea Pharmaceutica; Astellas Pharma; Pfizer; Melinta Therapeutics; Entasis Therapeutics; U.S. Food and Drug Administration; Amplyx; Roivant Sciences; Nabriva Therapeutics; Albany College of Pharmacy and Health Sciences; BD; GenePOC; University of North Texas; Boston Pharmaceuticals; F. Hoffmann-La Roche; Novartis; Harvard University; Wockhardt; Allergan; Cidara Therapeutics; University of Southern California; Bayer","keywords":"Microbiology; Candida krusei; Biology; Rhodotorula; Paecilomyces; Amphotericin B; Fungi imperfecti; Yeast; Candida albicans; Candida tropicalis; Antifungal; Botany; Biochemistry","score_opus":0.012559931615475663,"score_gpt":0.27783121659378884,"score_spread":0.2652712849783132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390740053","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99597883,0.0011007786,0.00001270694,0.0021176557,0.00010168689,0.00040572183,0.00014498922,0.000027582133,0.00011005952],"genre_scores_gemma":[0.99169165,0.0057362877,0.0000929758,0.002253318,0.00006889376,0.0000043691807,0.000024755249,0.000016716647,0.00011105458],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999114,0.000042319414,0.00020555947,0.00034718952,0.000097382064,0.00019359606],"domain_scores_gemma":[0.99961156,0.00006108411,0.000054842338,0.00018347954,0.00002685667,0.00006215753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015402728,0.0001737318,0.00034398292,0.00003272228,0.000059043196,0.000066438275,0.000057438618,0.00008593361,0.00002510693],"category_scores_gemma":[0.0000071365216,0.00012033643,0.000057374957,0.00011911464,0.0002495478,0.00010829968,0.000034154018,0.00017290706,0.0000016765375],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008102084,0.00025647943,0.3320971,0.00026016144,0.00015152623,0.00003699813,0.00086226384,1.7222305e-7,0.63662344,0.000008024652,0.006092649,0.022800967],"study_design_scores_gemma":[0.0020981773,0.0001314285,0.9070818,0.00038810342,0.000039566447,0.00002318424,0.00018944583,0.00093010836,0.074082956,0.000055668505,0.014735969,0.00024361609],"about_ca_topic_score_codex":0.00030279855,"about_ca_topic_score_gemma":0.00011401017,"teacher_disagreement_score":0.57498467,"about_ca_system_score_codex":0.000017707946,"about_ca_system_score_gemma":0.000035589877,"threshold_uncertainty_score":0.4907177},"labels":[],"label_agreement":null},{"id":"W4390908590","doi":"10.1099/mgen.0.001179","title":"Population genomic analyses reveal high diversity, recombination and nosocomial transmission among Candida glabrata (Nakaseomyces glabrata) isolates causing invasive infections","year":2024,"lang":"en","type":"article","venue":"Microbial Genomics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; McMaster University","funders":"Medical Research Council; Alliance de recherche numérique du Canada; University of British Columbia; Simon Fraser University; Sidra Medicine; McMaster University; Hamad Medical Corporation","keywords":"Candida glabrata; Biology; Population; Genetic diversity; Genetics; Transmission (telecommunications); Microbiology; Candida albicans; Medicine","score_opus":0.023843914838308035,"score_gpt":0.28473970527368747,"score_spread":0.2608957904353794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390908590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963501,0.0007017978,0.0013234005,0.00046434638,0.00038666895,0.00049571437,0.000110384186,0.00010053248,0.00006703287],"genre_scores_gemma":[0.9975763,0.0005320704,0.0005849705,0.00010396189,0.00024608328,0.0000034136035,0.00053355563,0.00002989938,0.00038975617],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99867517,0.00008120981,0.00036322308,0.00050942454,0.00011526867,0.00025568405],"domain_scores_gemma":[0.99936855,0.000107951535,0.000087734974,0.00020448679,0.000089833105,0.00014144975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023258197,0.000226183,0.0003586782,0.00023909198,0.0005965324,0.00017487121,0.00006909909,0.00025066815,0.0000826632],"category_scores_gemma":[0.000048918024,0.00021967804,0.00013198235,0.00029102835,0.000120019555,0.0003546994,0.00016306927,0.00036505275,0.000009727971],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000265742,0.00009672625,0.266825,0.00046109938,0.00017574533,0.000051004336,0.0012739407,0.00009619996,0.726517,0.000065053406,0.0012131842,0.0029592838],"study_design_scores_gemma":[0.0019451666,0.00036722253,0.9516837,0.00063095003,0.0011151414,0.00011088383,0.00036458418,0.0025834753,0.038905896,0.00077824487,0.0009064322,0.0006083219],"about_ca_topic_score_codex":0.006322788,"about_ca_topic_score_gemma":0.004427819,"teacher_disagreement_score":0.68761116,"about_ca_system_score_codex":0.00055822276,"about_ca_system_score_gemma":0.00020396689,"threshold_uncertainty_score":0.9558207},"labels":[],"label_agreement":null},{"id":"W4390919957","doi":"10.1016/s1473-3099(23)00692-8","title":"Global incidence and mortality of severe fungal disease","year":2024,"lang":"en","type":"article","venue":"The Lancet Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1344,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institute for Advanced Research","keywords":"Medicine; Incidence (geometry); Aspergillosis; Context (archaeology); Population; Mortality rate; Pneumocystis pneumonia; Pneumonia; Asthma; Outbreak; Internal medicine; Environmental health; Immunology; Biology; Pathology; Pneumocystis jirovecii","score_opus":0.020186292218849173,"score_gpt":0.32197571160010435,"score_spread":0.3017894193812552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390919957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851762,0.0107255755,0.000064382104,0.00044114483,0.00013590218,0.00022717442,0.00035212064,0.00019407013,0.0026834134],"genre_scores_gemma":[0.9985329,0.00060762133,0.0000052113533,0.00040664026,0.00029680814,0.000013272485,0.000012174413,0.000007546829,0.00011782813],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99912935,0.00005850802,0.0001589249,0.00023297072,0.00023727637,0.00018297276],"domain_scores_gemma":[0.9992178,0.00012036224,0.000031202442,0.00039546614,0.000058159058,0.00017698726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016020768,0.000115320356,0.00027630516,0.000018572977,0.00007345275,0.000035063626,0.000071567905,0.000029139823,0.00008662499],"category_scores_gemma":[0.0003047957,0.00007248173,0.00011233119,0.00022059694,0.00027548595,0.00009671999,0.000059465205,0.000094589,0.000013174355],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025166452,0.00008943455,0.99081117,0.00084555603,0.00009307876,0.00009516186,0.000034553865,0.000009755891,0.000028670895,0.0037265713,0.0017358748,0.0022784916],"study_design_scores_gemma":[0.00028516975,0.00006811605,0.9889538,0.0002200457,0.00038407082,0.000031246767,0.000029960174,0.00016870162,0.0000076082565,0.009365526,0.00040639803,0.00007931627],"about_ca_topic_score_codex":0.00012633076,"about_ca_topic_score_gemma":0.00014085547,"teacher_disagreement_score":0.01335668,"about_ca_system_score_codex":0.0000586452,"about_ca_system_score_gemma":0.00023535994,"threshold_uncertainty_score":0.2955719},"labels":[],"label_agreement":null},{"id":"W4391054310","doi":"10.1177/20499361231224980","title":"Update on therapeutic approaches for invasive fungal infections in adults","year":2024,"lang":"en","type":"article","venue":"Therapeutic Advances in Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Immunosuppression; Amphotericin B; Antifungal; Intensive care medicine; Voriconazole; Medicine; Immunology; Biology; Dermatology","score_opus":0.02758028964732312,"score_gpt":0.3152954032290605,"score_spread":0.2877151135817374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391054310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93500507,0.048773993,0.0054957694,0.000983403,0.00082416716,0.0027599416,0.0000838816,0.00039438604,0.005679414],"genre_scores_gemma":[0.99414384,0.003742598,0.000033901622,0.0009815667,0.00017659862,0.0006508603,0.00004460446,0.000053825308,0.00017220103],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981507,0.00010711263,0.0003995941,0.00065026357,0.00023474201,0.00045760215],"domain_scores_gemma":[0.998725,0.00058262027,0.000052676372,0.0004077344,0.000054288375,0.0001777042],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000297283,0.00030438253,0.00037947245,0.00038724896,0.00010020378,0.000043757293,0.00009513084,0.000105375315,0.00008824741],"category_scores_gemma":[0.00016062,0.0002564219,0.00022249648,0.0006525018,0.00018710844,0.00034608156,0.00002101607,0.00040520632,0.000063404346],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0060341936,0.002556443,0.6442506,0.0028456992,0.00017375231,0.00018432071,0.0008350866,0.0018104815,0.00009226807,0.047058076,0.000041539017,0.29411754],"study_design_scores_gemma":[0.012388029,0.003929731,0.6623015,0.005315397,0.0006753631,0.00007268158,0.0013216311,0.017191138,0.0005194607,0.26238084,0.032234028,0.0016702372],"about_ca_topic_score_codex":0.000017235547,"about_ca_topic_score_gemma":0.00080558466,"teacher_disagreement_score":0.2924473,"about_ca_system_score_codex":0.0003556359,"about_ca_system_score_gemma":0.00034414855,"threshold_uncertainty_score":0.9999888},"labels":[],"label_agreement":null},{"id":"W4391097775","doi":"10.3390/jof10010086","title":"Associations between Genomic Variants and Antifungal Susceptibilities in the Archived Global Candida auris Population","year":2024,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; McMaster University","keywords":"Candida auris; Biology; Clade; Anidulafungin; Genetics; Antifungal drug; Caspofungin; Voriconazole; Single-nucleotide polymorphism; Micafungin; Flucytosine; Posaconazole; Fluconazole; Population; Phylogenetic tree; Gene; Microbiology; Genotype; Medicine; Candida albicans; Antifungal","score_opus":0.022014652155266025,"score_gpt":0.30988043480545757,"score_spread":0.2878657826501915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391097775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99419296,0.0031613472,0.00013405655,0.0010155394,0.0001792289,0.00014897155,0.00012902103,0.000009617674,0.0010292531],"genre_scores_gemma":[0.99877405,0.00024874636,0.00026165086,0.00008507121,0.00041948582,6.195501e-7,0.000023064878,0.0000068471372,0.00018043663],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987433,0.00013803896,0.0004916553,0.00013541752,0.0003167179,0.00017485788],"domain_scores_gemma":[0.99927557,0.00033971303,0.000121951845,0.00012546463,0.000064712774,0.000072595576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010664337,0.00009785088,0.00031065458,0.000101625854,0.00006994451,0.00007672304,0.00008270234,0.000066726185,0.00004662305],"category_scores_gemma":[0.00021622163,0.00006382748,0.00012452819,0.0001698278,0.00004706881,0.00015827514,0.000017243494,0.00032119182,0.000005997998],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000625151,0.000037341935,0.9908746,0.00005482793,0.00008204011,0.00007186602,0.0010085845,0.0000017152229,0.0010008293,0.00042151878,0.0010088087,0.0053753736],"study_design_scores_gemma":[0.00036346714,0.00018088522,0.9961038,0.00016028597,0.00015097397,0.00006560201,0.0003763667,0.00007516693,0.0000129610635,0.0022237736,0.0002282022,0.000058486527],"about_ca_topic_score_codex":0.00032874194,"about_ca_topic_score_gemma":0.00052379584,"teacher_disagreement_score":0.005316887,"about_ca_system_score_codex":0.0002451063,"about_ca_system_score_gemma":0.00019682241,"threshold_uncertainty_score":0.2602809},"labels":[],"label_agreement":null},{"id":"W4391113001","doi":"10.1016/j.ijid.2024.01.012","title":"Severe hypercalcemia as a result of disseminated Candida krusei infection","year":2024,"lang":"en","type":"article","venue":"International Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; BC Cancer Agency; Vancouver Coastal Health Research Institute; Vancouver Coastal Health; Vancouver General Hospital; University of British Columbia","funders":"Health Canada","keywords":"Candida krusei; Fungemia; Neutropenia; Medicine; Complication; Opportunistic infection; Internal medicine; Fluconazole; Mycosis; Dermatology; Surgery; Antifungal; Immunology; Chemotherapy; Human immunodeficiency virus (HIV)","score_opus":0.00747179598788581,"score_gpt":0.31614510266441453,"score_spread":0.3086733066765287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391113001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99171275,0.0015961818,0.00020797946,0.0003954166,0.0011429794,0.00009082784,0.000058872793,0.000048879996,0.004746142],"genre_scores_gemma":[0.9979836,0.0007626441,0.000017452781,0.00011545835,0.0004323118,0.0000025302802,0.000019795993,0.0000154882,0.0006507601],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99860823,0.0000409916,0.0005117117,0.00014296047,0.0005844195,0.00011166277],"domain_scores_gemma":[0.99841183,0.00017984207,0.00018443762,0.00011129685,0.0009624352,0.00015012565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016210545,0.00012020543,0.00026244856,0.0003269889,0.000030476469,0.000051024366,0.000093491064,0.00007002361,0.00038839888],"category_scores_gemma":[0.0010203848,0.000092799346,0.0003307416,0.00022102434,0.000087495086,0.00025256473,0.000026274283,0.00023431522,0.000026350308],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015849298,0.0005939278,0.96431553,0.00023932199,0.00090819225,0.0009348479,0.00024704746,0.000060223934,0.007430302,0.0006771219,0.0063003832,0.016708175],"study_design_scores_gemma":[0.0018381127,0.0010533211,0.9764372,0.002254769,0.00054879737,0.0027095915,0.0001460261,0.00018162832,0.0048200404,0.0029186665,0.006897304,0.00019450809],"about_ca_topic_score_codex":0.00021100038,"about_ca_topic_score_gemma":0.000052850857,"teacher_disagreement_score":0.016513666,"about_ca_system_score_codex":0.0002949704,"about_ca_system_score_gemma":0.00049078296,"threshold_uncertainty_score":0.4252695},"labels":[],"label_agreement":null},{"id":"W4391163659","doi":"10.1093/ecco-jcc/jjad212.0275","title":"P145 Phagocyte responses to gut-derived C. albicans are modified in inflammatory bowel disease","year":2024,"lang":"en","type":"article","venue":"Journal of Crohn s and Colitis","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"Candida albicans; Corpus albicans; Microbiology; Inflammatory bowel disease; Gut flora; Biology; Immunology; Pathogenesis; Virulence; Phenotype; Innate immune system; Immune system; Disease; Medicine; Gene; Genetics; Pathology","score_opus":0.01959076506604126,"score_gpt":0.29695711577296463,"score_spread":0.2773663507069234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391163659","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916736,0.0040226774,0.00011346279,0.003328038,0.00015530613,0.00017934854,0.000033623786,0.00001374152,0.0004802364],"genre_scores_gemma":[0.996542,0.0006168221,0.000073835094,0.0006660971,0.00022444545,0.0000059715417,9.734268e-7,0.00001411989,0.0018557536],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99882233,0.00006820416,0.00043390036,0.00017057727,0.0002896264,0.00021533444],"domain_scores_gemma":[0.9990668,0.000116980525,0.00007683258,0.00015063425,0.00014374325,0.0004450075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037823358,0.0001183196,0.00029956788,0.00021086188,0.000045030727,0.000079671394,0.00006614438,0.000054090873,0.000085780295],"category_scores_gemma":[0.00033422146,0.00009340651,0.00012716302,0.0001357816,0.00008599827,0.00015409023,0.000027760365,0.00024699705,0.000008441975],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.14712621,0.0006840209,0.7092481,0.003245759,0.00044720023,0.06251124,0.004638675,0.00006386906,0.014809363,0.0043791146,0.020528309,0.032318093],"study_design_scores_gemma":[0.0006895285,0.00019588217,0.9879186,0.0010139418,0.0000636749,0.00008538773,0.00048691587,0.00009757054,0.00023869802,0.0004994386,0.008614823,0.00009551796],"about_ca_topic_score_codex":0.000020657964,"about_ca_topic_score_gemma":0.00008806129,"teacher_disagreement_score":0.2786705,"about_ca_system_score_codex":0.00011014123,"about_ca_system_score_gemma":0.00045623814,"threshold_uncertainty_score":0.38090068},"labels":[],"label_agreement":null},{"id":"W4391168979","doi":"10.1128/msphere.00761-23","title":"Functional genetic characterization of stress tolerance and biofilm formation in <i>Nakaseomyces</i> ( <i>Candida</i> ) <i>glabrata</i> via a novel CRISPR activation system","year":2024,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Government of Canada","keywords":"Biology; CRISPR; Candida glabrata; Gene; Genetics; Phenotype; Computational biology; Gene duplication; Pathogen; RNA interference; Antifungal drug; RNA; Candida albicans","score_opus":0.010360086840215815,"score_gpt":0.2262425734585906,"score_spread":0.2158824866183748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391168979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.928848,0.00052410393,0.06937475,0.00018739962,0.00015216811,0.0003783662,0.00010494338,0.000057425434,0.00037284073],"genre_scores_gemma":[0.9989504,0.0000834444,0.0002859482,0.0001291336,0.00011544776,0.00002960517,0.0001851987,0.000016129363,0.00020468976],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99894094,0.000026432544,0.00037561858,0.00026364147,0.0002463906,0.00014696263],"domain_scores_gemma":[0.9995626,0.000037188238,0.000086071836,0.00016667321,0.000093943454,0.00005350294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000112862675,0.00013142815,0.00022929157,0.000067047295,0.00004242425,0.000033742566,0.000034739904,0.00010071224,0.00004447946],"category_scores_gemma":[0.000015241344,0.00011714671,0.00004467353,0.00033851818,0.00004462294,0.0003716626,0.000016601949,0.0001337143,0.000009441199],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032153615,0.00010108188,0.03785745,0.0031054614,0.000018200799,0.000012425855,0.00024353898,0.00004147878,0.94990915,0.00017171312,0.00017272981,0.008045261],"study_design_scores_gemma":[0.001472865,0.00017034459,0.6615331,0.0032866115,0.00006483057,0.00007311306,0.0005524174,0.028405363,0.30319038,0.000022722243,0.0010053639,0.00022288365],"about_ca_topic_score_codex":0.00009488877,"about_ca_topic_score_gemma":0.00010770067,"teacher_disagreement_score":0.64671874,"about_ca_system_score_codex":0.00010647453,"about_ca_system_score_gemma":0.00006643615,"threshold_uncertainty_score":0.4777104},"labels":[],"label_agreement":null},{"id":"W4391255423","doi":"10.1128/jcm.00098-24","title":"Erratum for McTaggart et al., “First Canadian report of transmission of fluconazole-resistant <i>Candida parapsilosis</i> within two hospital networks confirmed by genomic analysis”","year":2024,"lang":"en","type":"erratum","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Candida parapsilosis; Fluconazole; Genome; Biology; Computational biology; Antifungal; Genetics; Microbiology; Gene","score_opus":0.0199142708523779,"score_gpt":0.3496414275581126,"score_spread":0.3297271567057347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391255423","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.66527814,0.12722671,0.008359761,0.06845313,0.10677547,0.0058969846,0.010052945,0.000084600724,0.007872261],"genre_scores_gemma":[0.96072865,0.0075784535,0.0011915689,0.0046388516,0.001367088,0.000015160273,0.0033602475,0.00013579357,0.020984204],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99124503,0.0003975993,0.006630957,0.0008244913,0.0002576769,0.0006442542],"domain_scores_gemma":[0.9918494,0.00095748756,0.0045519234,0.0007326433,0.0011639077,0.0007445956],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.004943941,0.0005707042,0.0048468793,0.0005629818,0.00008116022,0.000021817788,0.0004940005,0.0014961779,0.00013509749],"category_scores_gemma":[0.0010245403,0.0004268463,0.003310564,0.0004691264,0.00083741563,0.000057585083,0.000050296647,0.0031489707,0.0000022882264],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003795857,0.0005008907,0.012527315,0.00056575297,0.0059616887,0.00048304853,0.00009175401,0.000045871977,0.011508007,0.000029059747,0.9643046,0.00018613525],"study_design_scores_gemma":[0.003609715,0.0043772454,0.008655765,0.001877962,0.00818681,0.0003463213,0.00010309933,0.00024052348,0.00036508037,0.0001285865,0.97162384,0.0004850266],"about_ca_topic_score_codex":0.0028734286,"about_ca_topic_score_gemma":0.027880045,"teacher_disagreement_score":0.2954505,"about_ca_system_score_codex":0.00021966043,"about_ca_system_score_gemma":0.0056843874,"threshold_uncertainty_score":0.99995244},"labels":[],"label_agreement":null},{"id":"W4391386634","doi":"10.1128/cmr.00142-23","title":"Advancements and challenges in antifungal therapeutic development","year":2024,"lang":"en","type":"review","venue":"Clinical Microbiology Reviews","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Government of Canada; Canadian Institute for Advanced Research","keywords":"Antifungal; Disease; Clinical trial; Intensive care medicine; Antifungal drugs; Fungal disease; Infectious disease (medical specialty); Medicine; Biology; Microbiology; Pathology","score_opus":0.46345339756094517,"score_gpt":0.5017985896914717,"score_spread":0.03834519213052656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391386634","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000054222524,0.99681795,0.0000028713646,0.00012928869,0.0005680128,0.0020307694,0.000014341342,0.000030607505,0.0003519234],"genre_scores_gemma":[0.000009482941,0.99757105,0.00041134414,0.00034912062,0.00016515354,0.00014586134,0.00013674115,0.000045649675,0.0011656198],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9947913,0.000833909,0.0027174377,0.0012115042,0.00002640567,0.0004193863],"domain_scores_gemma":[0.9984434,0.00039496677,0.00037669332,0.0006084401,0.000033185843,0.00014327513],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002815718,0.00056906795,0.005115739,0.00014651779,0.000035659115,0.000011260524,0.00019596818,0.0008098157,0.000091001995],"category_scores_gemma":[0.00039732747,0.00033976158,0.0007362867,0.00020071042,0.00034717374,0.000028070534,0.00019964957,0.0012619678,0.0011715326],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018928802,0.00013640948,0.0006235749,0.057945948,0.00018023231,0.000017969665,0.000017709777,2.553833e-10,0.0000037406242,0.000035091613,0.00058547914,0.94043493],"study_design_scores_gemma":[0.00026773693,0.00020148305,0.00033337876,0.043527655,0.0010132913,0.00011605877,0.000007301066,6.8098345e-8,1.2852426e-7,0.000020630361,0.9542343,0.00027795337],"about_ca_topic_score_codex":4.2549811e-7,"about_ca_topic_score_gemma":0.000029843697,"teacher_disagreement_score":0.95364887,"about_ca_system_score_codex":0.00014961735,"about_ca_system_score_gemma":0.00051526737,"threshold_uncertainty_score":0.99990547},"labels":[],"label_agreement":null},{"id":"W4391561986","doi":"10.1093/ofid/ofae082","title":"Modeling Invasive Aspergillosis Risk for the Application of Prophylaxis Strategies","year":2024,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of Toronto; University Health Network; CancerCare Manitoba; Vancouver General Hospital; University of Manitoba","funders":"","keywords":"Aspergillosis; Medicine; Psychological intervention; Epidemiology; Intensive care medicine; The Internet; Incidence (geometry); Clinical Practice; Family medicine; Pathology; Computer science; Immunology; World Wide Web; Nursing","score_opus":0.016499662858307774,"score_gpt":0.3137886012110487,"score_spread":0.2972889383527409,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391561986","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8819853,0.006137982,0.1018302,0.0006110901,0.00017813608,0.003906375,0.00035562075,0.00014190958,0.004853371],"genre_scores_gemma":[0.9985812,0.00049999513,0.00007952757,0.00007936162,0.000054221207,0.00050729845,0.000039428505,0.000020558311,0.00013846274],"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99916756,0.000026226302,0.00021961899,0.00027584663,0.00014872466,0.00016204572],"domain_scores_gemma":[0.9990856,0.00028605832,0.0000502497,0.00034299036,0.00017347165,0.00006160195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016318513,0.00011464681,0.00021183761,0.000045485795,0.00022387801,0.00014765358,0.00014936674,0.000049749753,0.000039976476],"category_scores_gemma":[0.0002787604,0.000071696224,0.00019093919,0.0002045142,0.00008795585,0.00026710957,0.00007405886,0.0000988171,0.00001367914],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010631373,0.0006993187,0.83119965,0.0021211614,0.0008370005,0.000005871314,0.00040030453,0.008162304,0.002336771,0.052880444,0.0018081369,0.0984859],"study_design_scores_gemma":[0.0038585747,0.0050202315,0.26804557,0.0013335879,0.004250173,0.000025844807,0.015234498,0.50659406,0.0048789848,0.18380575,0.0059215478,0.0010311903],"about_ca_topic_score_codex":0.0010503124,"about_ca_topic_score_gemma":0.001079061,"teacher_disagreement_score":0.5631541,"about_ca_system_score_codex":0.00005927862,"about_ca_system_score_gemma":0.00037858437,"threshold_uncertainty_score":0.2923687},"labels":[],"label_agreement":null},{"id":"W4391811760","doi":"10.1128/jcm.00824-23","title":"Answer to the Photo Quiz: Were those hyphae or pseudohyphae in blood culture?","year":2024,"lang":"en","type":"letter","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Canadian Electricity Association; University of Ottawa","funders":"","keywords":"Hypha; Microbiology; Blood culture; Medicine; Biology; Antibiotics","score_opus":0.07045820884156043,"score_gpt":0.4090622388880718,"score_spread":0.3386040300465114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391811760","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.267698,0.0059989337,0.000021248452,0.71861273,0.0057621864,0.00079092133,0.00017199895,0.000022993967,0.00092098425],"genre_scores_gemma":[0.029697683,0.0034811955,0.00096832897,0.9154541,0.017176712,0.000012169856,0.00006778933,0.00008457187,0.03305748],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9945677,0.0007752838,0.0031728512,0.0006516541,0.00021149816,0.000621039],"domain_scores_gemma":[0.99627334,0.0015511136,0.0008356266,0.0007143173,0.00040965344,0.00021596263],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0030429983,0.0004567012,0.0024000758,0.00023810103,0.00004946282,0.00003802023,0.0007103768,0.0021245899,0.00092037464],"category_scores_gemma":[0.002978637,0.0002135329,0.0013251189,0.00033900904,0.00041478954,0.000054336884,0.000182536,0.00849801,0.00040021486],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023784596,0.0003376243,0.0072407615,0.00025973198,0.000549991,0.00715419,0.00018723746,3.3997e-7,0.005024272,0.0000033336364,0.9758068,0.0010573101],"study_design_scores_gemma":[0.0018581469,0.0027374509,0.0035990973,0.0012998293,0.0007767116,0.0035824126,0.00011313786,4.4819475e-7,0.00022256718,0.000108115215,0.9854571,0.0002449379],"about_ca_topic_score_codex":0.00002033324,"about_ca_topic_score_gemma":0.00034977528,"teacher_disagreement_score":0.23800029,"about_ca_system_score_codex":0.000095471216,"about_ca_system_score_gemma":0.0010138407,"threshold_uncertainty_score":0.9999929},"labels":[],"label_agreement":null},{"id":"W4391884323","doi":"10.2196/54672","title":"Pan-Indian Clinical Registry of Invasive Fungal Infections Among Patients in the Intensive Care Unit: Protocol for a Multicentric Prospective Study","year":2024,"lang":"en","type":"article","venue":"JMIR Research Protocols","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Indian Council of Medical Research","keywords":"Medicine; Observational study; Intensive care medicine; Intensive care unit; Clinical trial; Population; Medical record; Emergency medicine; Environmental health; Internal medicine","score_opus":0.2713782632066064,"score_gpt":0.5887097464963239,"score_spread":0.3173314832897175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391884323","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33704698,0.0000013824196,0.0000046828372,0.00007327439,0.00000842321,0.6624369,0.0000412529,0.000029230903,0.00035783753],"genre_scores_gemma":[0.47300324,1.8014518e-7,0.000013884599,0.000018994635,0.000076555036,0.52673054,0.000008823436,0.00001822006,0.00012955107],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9956004,0.0012065811,0.0008438718,0.0007062478,0.0010575254,0.0005853444],"domain_scores_gemma":[0.99262017,0.0019865842,0.00014027547,0.0008423376,0.0042537414,0.00015687635],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0026886158,0.00021498748,0.00047782826,0.00039841922,0.00022908351,0.00011956314,0.00036668847,0.00020724397,0.000032427874],"category_scores_gemma":[0.008862105,0.00013702996,0.0002435217,0.0015230991,0.0006281038,0.00019710072,0.00016795678,0.0016505637,0.000018845174],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034580177,0.0045578685,0.9708251,0.0042455196,0.00007256334,0.00015835908,0.012511877,3.284757e-7,0.00002248535,0.00006247502,0.0020322301,0.0020532238],"study_design_scores_gemma":[0.0077159135,0.012537491,0.92816645,0.0042686025,0.0000138329415,0.0000027693998,0.043625128,0.000017858067,0.00023272204,0.00012093308,0.0031769862,0.00012131643],"about_ca_topic_score_codex":0.00021954913,"about_ca_topic_score_gemma":0.0025681173,"teacher_disagreement_score":0.13595624,"about_ca_system_score_codex":0.00032778864,"about_ca_system_score_gemma":0.0014256911,"threshold_uncertainty_score":0.9994867},"labels":[],"label_agreement":null},{"id":"W4391902975","doi":"10.1093/jalm/jfad139","title":"Stability and Analytical Characterization of Voriconazole as Measured by Immunoassay","year":2024,"lang":"en","type":"article","venue":"The Journal of Applied Laboratory Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Voriconazole; Detection limit; Chromatography; Immunoassay; Therapeutic drug monitoring; Chemistry; Mass spectrometry; Pharmacology; Medicine; Pharmacokinetics; Antifungal; Antibody; Immunology","score_opus":0.014511006609010517,"score_gpt":0.272762030134278,"score_spread":0.2582510235252675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391902975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919895,0.0038534564,0.00050200033,0.002148963,0.00015295482,0.00018504554,0.00001994276,0.000013670113,0.0011344979],"genre_scores_gemma":[0.998541,0.0008228295,0.000016604303,0.00032472648,0.0002092441,0.0000010923313,0.000008451144,0.000013318246,0.00006276137],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99843013,0.00009421539,0.0006372677,0.00012314472,0.00058427785,0.0001309587],"domain_scores_gemma":[0.9987308,0.00024156614,0.00020432929,0.00024450273,0.00044136908,0.0001374651],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030065356,0.00012789365,0.00049914373,0.0000803716,0.000043753833,0.000007415878,0.00009625647,0.00007636719,0.00028641726],"category_scores_gemma":[0.00028306578,0.000068763526,0.000045062276,0.00044033982,0.0004617786,0.00008145727,0.000018503662,0.00038755883,0.0000042213806],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015678281,0.000080555976,0.0022507978,0.00027741122,0.00014123488,0.000012100299,0.0010600984,1.2895067e-7,0.99058783,0.0010773145,0.0011579733,0.0017867123],"study_design_scores_gemma":[0.006998485,0.004109723,0.28816053,0.002293537,0.003925556,0.00022060117,0.009543064,0.00063358666,0.63163686,0.00207915,0.049882345,0.00051653216],"about_ca_topic_score_codex":0.000006129528,"about_ca_topic_score_gemma":0.0000012671043,"teacher_disagreement_score":0.35895097,"about_ca_system_score_codex":0.0000670337,"about_ca_system_score_gemma":0.0003128481,"threshold_uncertainty_score":0.31360683},"labels":[],"label_agreement":null},{"id":"W4391931410","doi":"10.1186/s12879-024-09109-2","title":"Age difference of patients with and without invasive aspergillosis: a systematic review and meta-analysis","year":2024,"lang":"en","type":"review","venue":"BMC Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"NIHR Newcastle Biomedical Research Centre; Medical Research Council; Medical Research Council Centre for Medical Mycology; University of Exeter; National Institute for Health and Care Research","keywords":"Meta-analysis; Confidence interval; Medicine; Observational study; Subgroup analysis; Internal medicine; Publication bias; Aspergillosis; Medical microbiology; Random effects model; Meta-regression; Immunology","score_opus":0.04945000311375364,"score_gpt":0.3301730408470828,"score_spread":0.2807230377333292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391931410","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006781269,0.99498975,0.000015188404,0.0000034448392,0.000010602986,0.0036432217,0.00053309684,0.000048136288,0.00007840176],"genre_scores_gemma":[0.037955828,0.9607272,0.000014043399,0.0000869394,0.000008552971,0.0005928175,0.0001666393,0.000037571197,0.00041038753],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.997631,0.00033563757,0.0008465806,0.0006264821,0.00038581254,0.0001744453],"domain_scores_gemma":[0.9980787,0.00028885785,0.0005334231,0.0006732044,0.0002145128,0.00021128179],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016306958,0.0005321452,0.008769912,0.00026834063,0.000051868763,0.000042346182,0.00007741746,0.000111384645,0.000061862],"category_scores_gemma":[0.00073819584,0.0002615439,0.0016956091,0.00069420185,0.00020278191,0.000047816142,0.000079661004,0.00018077344,0.000006971565],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010702363,0.00014722282,0.07258931,0.8400203,0.087080516,0.000008529167,0.00001186436,2.3099744e-8,4.6071373e-9,0.000016589202,0.000014688258,0.00010025117],"study_design_scores_gemma":[0.00016137314,0.00016384567,0.0128970705,0.10345671,0.8829962,0.0000073074066,0.000007810617,3.163131e-7,1.5445224e-8,0.000014616524,0.000073248106,0.00022148505],"about_ca_topic_score_codex":0.000023899034,"about_ca_topic_score_gemma":0.00023430535,"teacher_disagreement_score":0.79591566,"about_ca_system_score_codex":0.000060026727,"about_ca_system_score_gemma":0.0002685773,"threshold_uncertainty_score":0.99998367},"labels":[],"label_agreement":null},{"id":"W4391963812","doi":"10.1128/spectrum.04095-23","title":"A chemical screen identifies structurally diverse metal chelators with activity against the fungal pathogen <i>Candida albicans</i>","year":2024,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University; University of Toronto","funders":"National Center for Advancing Translational Sciences; Canadian Institutes of Health Research; National Institutes of Health; National Institute of General Medical Sciences; Canadian Institute for Advanced Research","keywords":"Candida albicans; Corpus albicans; Microbiology; Aspergillus fumigatus; Xanthone; Biology; Candida glabrata; Pathogen; Antifungal drug; Efflux; Echinocandins; Natural product; Amphotericin B; Chemistry; Biochemistry; Antifungal; Caspofungin","score_opus":0.007980736860561048,"score_gpt":0.23447045448959974,"score_spread":0.2264897176290387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391963812","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942568,0.0009323599,0.000082731014,0.0024266646,0.00025347777,0.0004099612,0.0002991659,0.00015115296,0.0011877109],"genre_scores_gemma":[0.99722195,0.00005208546,0.000080706566,0.0005513038,0.00023462887,0.000010650233,0.00012939834,0.000028701914,0.0016905722],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998441,0.00009438337,0.00021935381,0.0006178683,0.00012761401,0.00049982115],"domain_scores_gemma":[0.9992233,0.00010663424,0.00005653439,0.00046341732,0.000039057446,0.00011108243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002630562,0.00029316836,0.00043232253,0.00006826811,0.00017428273,0.000055883072,0.00021504785,0.00019167765,0.0003769366],"category_scores_gemma":[0.000036568796,0.00016288276,0.00023385635,0.0002777253,0.0007938746,0.0001175701,0.00012431329,0.00063505536,0.0000993273],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006466914,0.000043273878,0.020574234,0.000060675116,0.00041663574,0.00030995967,0.0002245056,5.582861e-7,0.97505903,0.00021924212,0.0014011483,0.0010440556],"study_design_scores_gemma":[0.0021791377,0.00067393406,0.2216009,0.00029585295,0.0011620508,0.0017008216,0.0011339178,0.00007670885,0.7511903,0.000366483,0.01871167,0.0009082023],"about_ca_topic_score_codex":0.00012382172,"about_ca_topic_score_gemma":0.0005534519,"teacher_disagreement_score":0.2238687,"about_ca_system_score_codex":0.00014671951,"about_ca_system_score_gemma":0.00022339063,"threshold_uncertainty_score":0.66421664},"labels":[],"label_agreement":null},{"id":"W4392169427","doi":"10.1128/mbio.00263-24","title":"Variability in competitive fitness among environmental and clinical azole-resistant <i>Aspergillus fumigatus</i> isolates","year":2024,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Science Foundation of Jiangsu Province; Government of Jiangsu Province; International Development Research Centre; Fundação de Amparo à Pesquisa do Estado de São Paulo; Natural Science Research of Jiangsu Higher Education Institutions of China; Canadian Institutes of Health Research; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Azrieli Foundation; Conselho Nacional de Desenvolvimento Científico e Tecnológico; National Natural Science Foundation of China","keywords":"Aspergillus fumigatus; Azole; Microbiology; Biology; Antifungal","score_opus":0.010745736030992784,"score_gpt":0.2815130913822875,"score_spread":0.2707673553512947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392169427","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99397045,0.0010512761,0.000053737054,0.00036908552,0.00021648074,0.00032117844,0.00007208869,0.000060368446,0.0038853232],"genre_scores_gemma":[0.9985277,0.00030291552,0.00008584052,0.00017321864,0.00009399936,0.000008170632,0.00003808796,0.000017309438,0.0007527268],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99839085,0.00016655916,0.0004543012,0.00055875833,0.00016753374,0.00026199297],"domain_scores_gemma":[0.9990745,0.00043102368,0.000030046722,0.0002892399,0.000012848874,0.00016232056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010162181,0.00016866517,0.00038295475,0.000047809535,0.000053414784,0.000035183824,0.000061614075,0.00016606176,0.0003609077],"category_scores_gemma":[0.00014662936,0.00013916714,0.00012658349,0.000108294604,0.00060749927,0.0001078519,0.00008014251,0.00044370547,0.000044466826],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003948047,0.00030148277,0.98876745,0.00018019619,0.000050953695,0.00017057937,0.0002530076,2.0661763e-7,0.0062398133,0.0008407799,0.0001446338,0.0026561157],"study_design_scores_gemma":[0.00066832267,0.00021074756,0.99322104,0.00023246072,0.00006555623,0.0000076118613,0.00046674086,0.00074297976,0.00044931323,0.00038006686,0.0034019195,0.0001532464],"about_ca_topic_score_codex":0.000094004485,"about_ca_topic_score_gemma":0.000331019,"teacher_disagreement_score":0.0057905,"about_ca_system_score_codex":0.00014549754,"about_ca_system_score_gemma":0.00006899143,"threshold_uncertainty_score":0.56750715},"labels":[],"label_agreement":null},{"id":"W4392198225","doi":"10.1038/s41467-024-46141-x","title":"Global fungal-host interactome mapping identifies host targets of candidalysin","year":2024,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Program of Shanghai Academic Research Leader; Shanghai Jiao Tong University; Science and Technology Commission of Shanghai Municipality; National Natural Science Foundation of China","keywords":"Interactome; Host (biology); Computational biology; Host response; Biology; Computer science; Genetics; Gene; Immune system","score_opus":0.02198497588924153,"score_gpt":0.34690061285359275,"score_spread":0.3249156369643512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392198225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7620368,0.18494031,0.0006288216,0.015778814,0.00090426207,0.0006128901,0.00042625755,0.00030114746,0.034370687],"genre_scores_gemma":[0.99577254,0.0014448157,0.0012033453,0.00025257404,0.00005732457,0.000012413811,0.00013797464,0.000012390824,0.0011066331],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989351,0.00007805277,0.000348399,0.00022198803,0.00024820043,0.00016827334],"domain_scores_gemma":[0.9978042,0.00024618916,0.00006781633,0.0015366992,0.00026621344,0.00007885874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002881734,0.00012769614,0.0002764399,0.00012635147,0.00013293099,0.000049958908,0.0004652427,0.00021365359,0.0001076564],"category_scores_gemma":[0.00041797393,0.00010960158,0.00018824218,0.00076916465,0.00022648516,0.0001496838,0.00023720729,0.00076593464,0.000047326586],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025855174,0.0008876406,0.78535956,0.001484961,0.001188083,0.00009505891,0.003632208,0.000002235113,0.10424376,0.049949735,0.047418892,0.005479341],"study_design_scores_gemma":[0.0002537639,0.000046851575,0.90805393,0.0008139015,0.00019113235,0.00003132066,0.0010798152,0.0005396558,0.0013104542,0.00039170313,0.08711617,0.0001712961],"about_ca_topic_score_codex":0.00012845773,"about_ca_topic_score_gemma":0.0021722869,"teacher_disagreement_score":0.23373571,"about_ca_system_score_codex":0.00017395112,"about_ca_system_score_gemma":0.00019026407,"threshold_uncertainty_score":0.44694224},"labels":[],"label_agreement":null},{"id":"W4392298082","doi":"10.1183/13993003.00061-2024","title":"Revised ISHAM-ABPA working group clinical practice guidelines for diagnosing, classifying and treating allergic bronchopulmonary aspergillosis/mycoses","year":2024,"lang":"en","type":"article","venue":"European Respiratory Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":221,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton; McGill University","funders":"Grifols; Astellas Foundation for Research on Metabolic Disorders; Astellas Pharma; Regeneron Pharmaceuticals; Teva Pharmaceutical Industries; BioCryst; Gilead Sciences; Shionogi; Sanofi; GlaxoSmithKline; Cidara Therapeutics; AstraZeneca; Pfizer","keywords":"Medicine; Allergic bronchopulmonary aspergillosis; Aspergillosis; Clinical Practice; Pulmonary aspergillosis; Dermatology; Immunology; Family medicine","score_opus":0.20981953769321895,"score_gpt":0.447956165413855,"score_spread":0.23813662772063607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392298082","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7900505,0.16661686,0.0055748383,0.007203309,0.002231304,0.0009947392,0.000013931171,0.00037664405,0.0269379],"genre_scores_gemma":[0.92987907,0.009731167,0.032630105,0.016269801,0.010019297,0.0000141964665,0.000011608373,0.00021718966,0.0012275764],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958906,0.00087844237,0.0016211768,0.0006796722,0.0004772741,0.00045280205],"domain_scores_gemma":[0.99641776,0.0017830448,0.00037946997,0.00034912693,0.00064804376,0.00042258244],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00722822,0.0003176423,0.0005440102,0.00017035451,0.00055624644,0.00043190952,0.00017162296,0.00011433124,0.00008046304],"category_scores_gemma":[0.013127907,0.0002480561,0.0004298037,0.00022180546,0.000174861,0.00047878193,0.00010276871,0.0010484094,0.000029690018],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016470817,0.00038055785,0.17110574,0.0007247521,0.0005527759,0.007964665,0.00036490132,0.0000138177875,0.005640321,0.00033939083,0.12435296,0.686913],"study_design_scores_gemma":[0.0015946423,0.0009885916,0.085350715,0.0042618536,0.00044935168,0.0011405891,0.0008432926,0.0009889256,0.000028682098,0.000049305807,0.90397054,0.00033352652],"about_ca_topic_score_codex":0.0000014852503,"about_ca_topic_score_gemma":0.000003690864,"teacher_disagreement_score":0.77961755,"about_ca_system_score_codex":0.00012147205,"about_ca_system_score_gemma":0.00022822792,"threshold_uncertainty_score":0.99999714},"labels":[],"label_agreement":null},{"id":"W4392751097","doi":"10.53555/sfs.v10i6.2288","title":"Effect Of Candida Auris Secretions On Human-Derived Monocytes/Macrophages","year":2023,"lang":"en","type":"article","venue":"Journal of Survey in Fisheries Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Candida auris; Microbiology; Immune system; Innate immune system; Biology; Fungal pathogen; Macrophage; Immunology; Candida infections; Pathogen; Opportunistic pathogen; Antifungal; In vitro; Virulence","score_opus":0.18295612073515172,"score_gpt":0.3724626899439613,"score_spread":0.1895065692088096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392751097","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99811256,0.0001465792,0.000005104628,0.00032869648,0.00021342767,0.00011275287,0.000014219358,0.000010629864,0.0010560467],"genre_scores_gemma":[0.9993491,0.00018444285,0.000043603934,0.000032206048,0.000044455686,0.0000018061015,0.0000036422553,0.0000055989144,0.000335135],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982907,0.0003129932,0.00048450287,0.00015329539,0.0005426021,0.00021586256],"domain_scores_gemma":[0.9983002,0.0010550687,0.00025851524,0.0001382743,0.00016385714,0.0000840602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0052611516,0.000107531705,0.00045263686,0.00028319485,0.00014366381,0.000029516272,0.00019436247,0.0000561775,0.00011977139],"category_scores_gemma":[0.001745615,0.00007096623,0.000118551405,0.0010524222,0.00065597845,0.00017950701,0.000029324134,0.00021529396,0.000005663183],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050450774,0.000045130768,0.97638696,0.00007391628,0.000016044882,0.000058604986,0.0002950275,0.00003370061,0.020498075,0.000008196403,0.0014205127,0.00065932673],"study_design_scores_gemma":[0.0005823479,0.0032623888,0.9745814,0.00019114965,0.000014317816,0.000008114424,0.00033704264,0.000015189458,0.02082263,0.0000648921,0.00006121303,0.00005931247],"about_ca_topic_score_codex":0.0006185214,"about_ca_topic_score_gemma":0.0011814256,"teacher_disagreement_score":0.0035155362,"about_ca_system_score_codex":0.000062500076,"about_ca_system_score_gemma":0.00019627974,"threshold_uncertainty_score":0.28939188},"labels":[],"label_agreement":null},{"id":"W4392808556","doi":"10.1038/s42003-024-05902-6","title":"Genomic diversity of the pathogenic fungus Aspergillus fumigatus in Japan reveals the complex genomic basis of azole resistance","year":2024,"lang":"en","type":"article","venue":"Communications Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; Ministry of Education, Culture, Sports, Science and Technology; Institute of Genetics; Japan Agency for Medical Research and Development","keywords":"Aspergillus fumigatus; Biology; Genetics; Genome; Azole; Population; Pathogenic fungus; Mutant; Fungus; Genetic diversity; Microbiology; Gene; Antifungal","score_opus":0.05845661154723882,"score_gpt":0.3118142936937228,"score_spread":0.253357682146484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392808556","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97512525,0.01758509,0.000016764792,0.0036148096,0.00007249209,0.00038367513,0.0001514219,0.000016660757,0.0030338117],"genre_scores_gemma":[0.99687374,0.0020182582,0.0003672778,0.00018613592,0.000016001679,0.000012362803,0.000039896353,0.000008778409,0.0004775425],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986931,0.0004269781,0.00042503857,0.00020145242,0.00007945602,0.0001739628],"domain_scores_gemma":[0.9969343,0.00050386833,0.00012331732,0.0023121713,0.00009465362,0.000031680454],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064034044,0.00010290039,0.00031535525,0.00007268005,0.00023874034,0.0000042869374,0.0010630948,0.000101082725,0.00007576102],"category_scores_gemma":[0.00017719576,0.00006433155,0.00018188919,0.0004014925,0.0010443031,0.000021500282,0.0011008874,0.00031922653,0.0000140202],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010195575,0.00009812866,0.76063335,0.00012041078,0.000080078375,7.4193616e-7,0.0011312746,0.0000027486944,0.22196063,0.0139999995,0.00043412286,0.0014365546],"study_design_scores_gemma":[0.00022158757,0.000039098086,0.99194324,0.000098846045,0.000079419544,0.000003446066,0.0005356969,0.00013824012,0.00046525677,0.001543616,0.0048709926,0.00006055082],"about_ca_topic_score_codex":0.0002043368,"about_ca_topic_score_gemma":0.0028448722,"teacher_disagreement_score":0.2313099,"about_ca_system_score_codex":0.00014305383,"about_ca_system_score_gemma":0.00016650489,"threshold_uncertainty_score":0.3847778},"labels":[],"label_agreement":null},{"id":"W4392857342","doi":"10.3390/jcm13061704","title":"Diagnostic Accuracy in Detecting Fungal Infection with Ultra-Low-Dose Computed Tomography (ULD-CT) Using Filtered Back Projection (FBP) Technique in Immunocompromised Patients","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph's Hospital; London Health Sciences Centre; Western University; Princess Margaret Cancer Centre; Canon (Canada); Toronto General Hospital","funders":"","keywords":"Medicine; Computed tomography; Nuclear medicine; Radiology; Radon transform; Projection (relational algebra); Artificial intelligence; Algorithm","score_opus":0.05289367359968039,"score_gpt":0.39297769320359477,"score_spread":0.3400840196039144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392857342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940416,0.00047807881,0.0028201528,0.0003352919,0.0008452302,0.0012696917,0.000001892794,0.000035257734,0.00017275817],"genre_scores_gemma":[0.9973601,0.0003020304,0.0014993201,0.00016663806,0.00061067846,0.000013470847,0.0000070151814,0.000030422845,0.000010302643],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99588203,0.00045963167,0.0024047692,0.00036545633,0.000578179,0.00030990245],"domain_scores_gemma":[0.99497443,0.0035076034,0.0006760057,0.00023558596,0.00041067618,0.00019569456],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0033654291,0.0002495061,0.0010750712,0.00078421074,0.00004919217,0.000025760246,0.000105252024,0.00016856419,0.000059940732],"category_scores_gemma":[0.008604203,0.00016543166,0.00025202238,0.0014262258,0.00021346714,0.0003379617,0.000020984453,0.0017882567,0.0000030841472],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029564134,0.0008658708,0.95075506,0.00074682594,0.00010577641,0.00064781687,0.00019218939,0.000045683282,0.010020441,0.0000019931636,0.00006527278,0.033596653],"study_design_scores_gemma":[0.008555578,0.0044063246,0.9665413,0.015716437,0.00017003671,0.00035199753,0.00012000154,0.0018059106,0.0019686294,0.00007268472,0.00013484505,0.00015625192],"about_ca_topic_score_codex":0.00028133145,"about_ca_topic_score_gemma":0.00021548053,"teacher_disagreement_score":0.033440404,"about_ca_system_score_codex":0.00022901133,"about_ca_system_score_gemma":0.00037098813,"threshold_uncertainty_score":0.99974674},"labels":[],"label_agreement":null},{"id":"W4392870872","doi":"10.1093/jscr/rjae150","title":"Case report: cardiac tamponade secondary to candida pericarditis","year":2024,"lang":"en","type":"article","venue":"Journal of Surgical Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Medicine; Cardiac tamponade; Tamponade; Pericarditis; Antifungal; Cardiac surgery; Surgery; Infective endocarditis; Cardiothoracic surgery; Presentation (obstetrics); Pathological; Intensive care medicine; Internal medicine; Dermatology","score_opus":0.01631999433014346,"score_gpt":0.3037597533069951,"score_spread":0.28743975897685164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392870872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9824621,0.006092075,0.00010563203,0.0013478935,0.001738322,0.00023207569,0.000028175513,0.000043239892,0.007950485],"genre_scores_gemma":[0.9955732,0.00019564731,0.0003102951,0.00011039494,0.0013659988,0.0000050731373,0.00000792957,0.00003220055,0.0023992525],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9969954,0.00009363936,0.0014200682,0.0004099152,0.00074758666,0.00033338182],"domain_scores_gemma":[0.9976494,0.00024360456,0.0003136,0.0004742522,0.0004388044,0.0008803639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019427894,0.00021405914,0.00085110456,0.00021745484,0.000111049616,0.0000875595,0.00002642608,0.00014556134,0.00077910296],"category_scores_gemma":[0.00045166985,0.00015540559,0.00086621847,0.00040623554,0.000088716355,0.00019639047,0.000047230293,0.0007564889,0.000014518185],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001861377,0.000062849926,0.0074972613,0.00021661044,0.00018694716,0.96503586,0.00021681056,0.0000049941564,0.00027592303,0.000010879116,0.01953303,0.006772692],"study_design_scores_gemma":[0.00016343454,0.0002381523,0.0019944338,0.0001957885,0.00024662417,0.7528479,0.00029459872,0.0000039808297,0.00027659358,0.000039781833,0.24357304,0.00012563547],"about_ca_topic_score_codex":0.00021383594,"about_ca_topic_score_gemma":0.000027523129,"teacher_disagreement_score":0.22404002,"about_ca_system_score_codex":0.0002962384,"about_ca_system_score_gemma":0.0010282932,"threshold_uncertainty_score":0.8530631},"labels":[],"label_agreement":null},{"id":"W4393338499","doi":"10.1016/j.jcrc.2024.154740","title":"Epidemiology and risk factors of invasive fungal disease in pediatric intensive care unit of a developing country","year":2024,"lang":"en","type":"article","venue":"Journal of Critical Care","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Epidemiology; Intensive care medicine; Pediatric intensive care unit; Developing country; Intensive care unit; Invasive candidiasis; Environmental health; Antifungal; Internal medicine","score_opus":0.050875988768765784,"score_gpt":0.3730446715689422,"score_spread":0.3221686828001764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393338499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9530948,0.045964777,0.00013651507,0.00038878748,0.00016376916,0.000086070264,0.00011080683,0.0000035907276,0.000050889335],"genre_scores_gemma":[0.99836785,0.0011492725,0.00023207127,0.000114991395,0.00011557919,6.5846393e-7,0.000006833331,0.00000921728,0.0000035223584],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99858993,0.00018108405,0.0006778601,0.00014756965,0.0002211233,0.00018241169],"domain_scores_gemma":[0.9952379,0.0021851289,0.00012071341,0.000101105135,0.002139821,0.00021537335],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00033383718,0.00011159816,0.0005990934,0.00021411366,0.00002201862,0.000003519601,0.000058305974,0.00010301471,0.000016932203],"category_scores_gemma":[0.021724362,0.000080617996,0.00014194925,0.00022044778,0.0002791548,0.00009201793,0.000036353336,0.00048704652,4.4225595e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003886498,0.00001781142,0.9875956,0.0072178156,0.000023025108,0.00042951579,0.0031835565,0.000004175959,0.00004386423,0.0009080093,0.000021299682,0.0001666515],"study_design_scores_gemma":[0.00035100925,0.00039024465,0.9557645,0.00076146686,0.00051367364,0.000023279828,0.04110008,0.000013020508,0.00023310489,0.00076423126,0.000016113034,0.000069293725],"about_ca_topic_score_codex":0.000053676802,"about_ca_topic_score_gemma":0.0001002322,"teacher_disagreement_score":0.04527306,"about_ca_system_score_codex":0.00010615766,"about_ca_system_score_gemma":0.00089577766,"threshold_uncertainty_score":0.98651606},"labels":[],"label_agreement":null},{"id":"W4393411060","doi":"10.1128/spectrum.04041-23","title":"Approaches for identifying and measuring heteroresistance in azole-susceptible <i>Candida</i> isolates","year":2024,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fondation pour la Recherche Médicale; Agence Nationale de la Recherche; Canadian Institute for Advanced Research","keywords":"Candida albicans; Biology; Population; Azole; Computational biology; Profiling (computer programming); Context (archaeology); Corpus albicans; Microbiology; Antifungal; Medicine; Computer science","score_opus":0.05817012966664773,"score_gpt":0.2827556319272726,"score_spread":0.22458550226062488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393411060","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9802311,0.015172746,0.0017236916,0.001429111,0.00022149757,0.000500749,0.000033762968,0.000102939295,0.0005843944],"genre_scores_gemma":[0.9977172,0.00021514173,0.000768217,0.00016379535,0.00010553705,0.000035816134,0.00003739494,0.00002739487,0.00092949555],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863863,0.0000350347,0.0002885459,0.00056569173,0.000035321427,0.00043679323],"domain_scores_gemma":[0.9995814,0.00010420216,0.000031308053,0.0002063609,0.000014684746,0.000062072075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003783477,0.00018684383,0.0003644329,0.00015987249,0.00008556093,0.00005060691,0.00007548834,0.00014863962,0.0000316806],"category_scores_gemma":[0.0000372509,0.0001612344,0.0001098284,0.00017808436,0.0001850816,0.0000951357,0.000044857414,0.000252948,0.0000186383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052941585,0.00007645006,0.089255154,0.0012787866,0.00009964067,0.000050261555,0.00053512526,0.0000021829749,0.9041555,0.0017604675,0.00079110364,0.0014659357],"study_design_scores_gemma":[0.00902709,0.002453051,0.28389338,0.0049456633,0.0006202443,0.0012325734,0.0033750155,0.003618921,0.60883164,0.025311155,0.05432242,0.0023688537],"about_ca_topic_score_codex":0.00003163841,"about_ca_topic_score_gemma":0.0010619819,"teacher_disagreement_score":0.29532385,"about_ca_system_score_codex":0.000115379895,"about_ca_system_score_gemma":0.000061758685,"threshold_uncertainty_score":0.65749484},"labels":[],"label_agreement":null},{"id":"W4394061609","doi":"10.1101/2024.04.05.588305","title":"Brilacidin, a host defense peptide mimetic, potentiates ibrexafungerp antifungal activity against the human pathogenic fungus <i>Aspergillus fumigatus</i>","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Azrieli Foundation; Conselho Nacional de Desenvolvimento Científico e Tecnológico; International Development Research Centre; Fundação de Amparo à Pesquisa do Estado de São Paulo; Canadian Institutes of Health Research; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; GlaxoSmithKline","keywords":"Aspergillus fumigatus; Microbiology; Fungus; Antifungal; Aspergillosis; Aspergillus; Peptide; Pathogenic fungus; Biology; Chemistry; Biochemistry; Immunology; Botany","score_opus":0.01474233050945151,"score_gpt":0.23954353447247675,"score_spread":0.22480120396302525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394061609","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97792625,0.015100566,0.0000999466,0.0008251778,0.0017678756,0.0022196595,0.0008832615,0.000960219,0.00021706123],"genre_scores_gemma":[0.995331,0.0012612396,0.00044159192,0.0008556198,0.0012746213,0.00022314364,0.000004171964,0.00039826447,0.00021038581],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99279106,0.0005023469,0.0011861444,0.0026579713,0.0013243097,0.0015381487],"domain_scores_gemma":[0.9935525,0.00024258348,0.00062800065,0.0038293824,0.0009702497,0.00077725196],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.0018854787,0.0014861155,0.0017687214,0.0004130889,0.0007444478,0.0006208903,0.0009342595,0.0011894658,0.00015543702],"category_scores_gemma":[0.000625161,0.0012102701,0.0013059287,0.0010936229,0.0007472449,0.00018487612,0.0016641176,0.0036251436,0.0005146306],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029964658,0.00045392747,0.03298649,0.0022416355,0.00090882176,0.0011022454,0.000035677425,0.0000072893945,0.9592969,0.0003032933,0.0023556938,0.000008427973],"study_design_scores_gemma":[0.0011863817,0.000236551,0.59908664,0.0027633165,0.0020840575,7.2716324e-7,0.00002759762,0.00024362208,0.3889235,0.00001556465,0.0037094294,0.0017226243],"about_ca_topic_score_codex":0.00016089212,"about_ca_topic_score_gemma":0.000041237898,"teacher_disagreement_score":0.57037336,"about_ca_system_score_codex":0.0007259993,"about_ca_system_score_gemma":0.0015747322,"threshold_uncertainty_score":0.9997888},"labels":[],"label_agreement":null},{"id":"W4394348400","doi":"10.6084/m9.figshare.13182289","title":"Preventing <i>Candida albicans</i> from subverting host plasminogen for invasive infection treatment","year":2020,"lang":"en","type":"dataset","venue":"Figshare","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Candida albicans; Host (biology); Microbiology; Medicine; Host factors; Biology; Immunology; Ecology","score_opus":0.05674185837233905,"score_gpt":0.303368832885267,"score_spread":0.24662697451292795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394348400","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00091665966,0.0003084634,9.907337e-7,0.00006312178,0.00010263048,0.0015344559,0.9969045,0.000063280735,0.000105919804],"genre_scores_gemma":[0.0012646314,0.00010144022,0.000047256628,0.00046378878,0.0009250321,0.00068838306,0.9960821,0.000039325758,0.00038800936],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.998263,0.000042571253,0.00041708976,0.00067916675,0.00025958655,0.0003385986],"domain_scores_gemma":[0.9983056,0.0005391826,0.0003419671,0.0004625179,0.00014531038,0.00020539758],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00003632308,0.00038574415,0.00066807575,0.000059100388,0.00015782655,0.00005377958,0.00012435712,0.0003513007,0.040745363],"category_scores_gemma":[0.003200102,0.000340463,0.000402152,0.00012891446,0.000009615518,0.000079655234,0.00008591332,0.00028254944,0.0015138424],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023037997,0.00010724624,0.0008416441,0.0015966869,0.00024805003,0.00005933901,0.00004907427,4.1508682e-7,0.00020125693,3.6065163e-8,0.99582183,0.0008440126],"study_design_scores_gemma":[0.001094192,0.0005278745,0.004698155,0.004708995,0.00044285884,0.0000034971376,0.000028242546,0.000009875009,0.0028125048,0.0000036940676,0.9853861,0.00028406648],"about_ca_topic_score_codex":0.0010499123,"about_ca_topic_score_gemma":0.0042378376,"teacher_disagreement_score":0.03923152,"about_ca_system_score_codex":0.00034967175,"about_ca_system_score_gemma":0.0005594193,"threshold_uncertainty_score":0.99990475},"labels":[],"label_agreement":null},{"id":"W4394721671","doi":"10.1016/j.healun.2024.02.1431","title":"Intrapleural Amphotericin B for Aspergillus Empyema After Lung Transplantation","year":2024,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"","keywords":"Amphotericin B; Empyema; Medicine; Lung transplantation; Aspergillus; Lung; Transplantation; Aspergillosis; Surgery; Microbiology; Antifungal; Biology; Dermatology; Internal medicine; Immunology","score_opus":0.010165595063042538,"score_gpt":0.2945880595538618,"score_spread":0.28442246449081926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394721671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9735637,0.005160199,0.018610071,0.002010246,0.00026361985,0.00029527766,0.000036079342,0.000016906311,0.000043921278],"genre_scores_gemma":[0.99479866,0.004031049,0.000527316,0.00026503493,0.00021935726,0.0000052715873,0.000024019884,0.0000139068825,0.000115404444],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991469,0.00006199474,0.00034126377,0.00010143093,0.00020529487,0.00014313254],"domain_scores_gemma":[0.9995165,0.00021581273,0.000045209836,0.00006970532,0.0000858718,0.00006693251],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005868177,0.000108109976,0.00020712492,0.00009784304,0.00008445527,0.000034631506,0.000035645313,0.000057351655,0.000037525617],"category_scores_gemma":[0.000008202051,0.00006523333,0.00012694871,0.000104854764,0.000057448397,0.00021644468,0.0000012779591,0.00018376953,0.0000017353287],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.08160638,0.0003081133,0.117383115,0.027575344,0.0011965126,0.0010747066,0.064044245,0.00012833194,0.68394256,0.0010386885,0.006263699,0.01543832],"study_design_scores_gemma":[0.0037858333,0.0013878087,0.9497565,0.0028332323,0.004050493,0.0058514853,0.0009065017,0.008550383,0.020552034,0.00044248527,0.0015891417,0.00029406976],"about_ca_topic_score_codex":0.000013928336,"about_ca_topic_score_gemma":0.00004431197,"teacher_disagreement_score":0.83237344,"about_ca_system_score_codex":0.000033550576,"about_ca_system_score_gemma":0.00006960247,"threshold_uncertainty_score":0.2660138},"labels":[],"label_agreement":null},{"id":"W4394869921","doi":"10.1093/jac/dkae103","title":"Triazole antifungal drug interactions—practical considerations for excellent prescribing","year":2024,"lang":"en","type":"review","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Royal College of Pathologists of Australasia","keywords":"Medicine; Itraconazole; Fluconazole; Pharmacology; Posaconazole; Drug; Antifungal drug; Antifungal; Dermatology","score_opus":0.11122959930311105,"score_gpt":0.41969659889291056,"score_spread":0.3084669995897995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394869921","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004579026,0.98943144,0.0013326902,0.0041119363,0.0024884313,0.0016128465,0.00012059981,0.000045426656,0.00039871936],"genre_scores_gemma":[0.0009495631,0.98521686,0.008369328,0.0006703407,0.0019356571,0.000012127477,0.00003132724,0.00012307512,0.0026917055],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99687845,0.00014768295,0.0018633088,0.00041811413,0.00033587494,0.0003565532],"domain_scores_gemma":[0.9969666,0.00092134293,0.0009861465,0.00036812175,0.00055123965,0.0002065612],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009598848,0.00049928384,0.002549034,0.00042496526,0.00015590158,0.00019677162,0.0001112306,0.00022929531,0.00042430032],"category_scores_gemma":[0.000556122,0.0003535739,0.0024924576,0.00023552359,0.00012297767,0.00024879884,0.000032586766,0.001394826,0.00005112006],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013790921,0.0011368183,0.00001765808,0.025867924,0.0026517594,0.0005275835,0.0003493997,7.991798e-7,0.00331888,0.00017444165,0.8776387,0.086936936],"study_design_scores_gemma":[0.0016186007,0.00018597617,0.0000026032662,0.018667582,0.0039246865,0.0036902335,0.00006590786,0.0000110779465,0.0013226463,0.00010936826,0.97009856,0.00030276846],"about_ca_topic_score_codex":0.000004139317,"about_ca_topic_score_gemma":0.000008549568,"teacher_disagreement_score":0.09245984,"about_ca_system_score_codex":0.00032325304,"about_ca_system_score_gemma":0.0020942993,"threshold_uncertainty_score":0.99989164},"labels":[],"label_agreement":null},{"id":"W4396636708","doi":"10.1038/s41467-024-48231-2","title":"An oxylipin signal confers protection against antifungal echinocandins in pathogenic aspergilli","year":2024,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Azrieli Foundation; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Canadian Institutes of Health Research; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; International Development Research Centre; Fundação de Amparo à Pesquisa do Estado de São Paulo; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Echinocandins; Echinocandin; Oxylipin; Aspergillus fumigatus; Microbiology; Biology; Aspergillosis; Aspergillus; Caspofungin; Fungal protein; Gliotoxin; Aspergillus nidulans; Amphotericin B; Antifungal; Biochemistry; Immunology; Enzyme; Gene; Fluconazole","score_opus":0.030152052266069197,"score_gpt":0.3368934058832159,"score_spread":0.3067413536171467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396636708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96928954,0.012474992,0.0007333714,0.00396923,0.00027033789,0.0010371822,0.00010232265,0.00033920258,0.011783835],"genre_scores_gemma":[0.99667424,0.0011022934,0.0010636401,0.00040610548,0.00009151765,0.000058581165,0.00034133001,0.000027091499,0.0002351958],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99869424,0.00020243027,0.00030240056,0.00034161186,0.00023447607,0.00022484224],"domain_scores_gemma":[0.99820143,0.00010014666,0.000037568865,0.0014194497,0.0001229488,0.000118464566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004899234,0.00015766127,0.00022487919,0.00023859722,0.00019484962,0.0000682327,0.0003798508,0.0003683026,0.00007813039],"category_scores_gemma":[0.00011750446,0.0001397202,0.0001277362,0.0006465806,0.00017151311,0.00021602279,0.000067291054,0.0019337145,0.000044465658],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041313164,0.0014704898,0.17250463,0.00036889277,0.00018008801,0.00011029184,0.0015552099,0.00004562591,0.72973394,0.03267048,0.0022169694,0.058730245],"study_design_scores_gemma":[0.001611635,0.0006089609,0.848144,0.0011413839,0.00019186633,0.00007275428,0.0014092202,0.054773163,0.005920585,0.00096208655,0.084474824,0.00068953045],"about_ca_topic_score_codex":0.000056463483,"about_ca_topic_score_gemma":0.0027187413,"teacher_disagreement_score":0.72381335,"about_ca_system_score_codex":0.00023382205,"about_ca_system_score_gemma":0.00032423873,"threshold_uncertainty_score":0.84011346},"labels":[],"label_agreement":null},{"id":"W4396648124","doi":"10.1177/20499361241242963","title":"Fungal infections in patients after recovering from COVID-19: a systematic review","year":2024,"lang":"en","type":"review","venue":"Therapeutic Advances in Infectious Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Population; MEDLINE; Systematic review; Aspergillosis; Cohort study; Mycosis; Dermatology; Internal medicine; Immunology; Biology; Environmental health","score_opus":0.02470480939351396,"score_gpt":0.3729724910061437,"score_spread":0.3482676816126298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396648124","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023159658,0.9925498,0.0001172923,0.000029794199,0.0005866324,0.0056871963,0.00026403536,0.00017389448,0.00035978167],"genre_scores_gemma":[0.009883132,0.98542696,0.000007041816,0.0014265286,0.000102972146,0.0027098272,0.0001944035,0.000099482284,0.00014967595],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99598026,0.00060209614,0.0015794904,0.00092746306,0.00044439064,0.00046628754],"domain_scores_gemma":[0.9975359,0.0005384295,0.00036836675,0.0009870226,0.00006961308,0.0005006955],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00050367444,0.00070521544,0.003283049,0.00048984,0.00006442155,0.00004542551,0.00017724666,0.00022726637,0.00031728836],"category_scores_gemma":[0.0013844226,0.00052764505,0.000861281,0.0011532957,0.00012321895,0.0002747698,0.000093583025,0.0009142012,0.00029324176],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012671354,0.00061759306,0.028751161,0.9264315,0.00021732287,0.00023446194,0.00004971697,0.0000029153475,4.8029776e-9,0.000029358658,0.000020052807,0.043519218],"study_design_scores_gemma":[0.0008404637,0.00016785944,0.0012794582,0.83876425,0.009672562,0.000012051195,0.00001302268,0.000008192709,7.3831363e-9,0.0015992537,0.14702149,0.00062137767],"about_ca_topic_score_codex":0.00006712466,"about_ca_topic_score_gemma":0.00051239686,"teacher_disagreement_score":0.14700143,"about_ca_system_score_codex":0.0019315567,"about_ca_system_score_gemma":0.0010704634,"threshold_uncertainty_score":0.99971753},"labels":[],"label_agreement":null},{"id":"W4396954757","doi":"10.1093/cid/ciae203","title":"Breakthrough Invasive Fungal Infections in Patients With High-Risk Hematological Disorders Receiving Voriconazole and Posaconazole Prophylaxis: A Systematic Review","year":2024,"lang":"en","type":"review","venue":"Clinical Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Université de Montréal; Centre intégré universitaire de santé et de services sociaux de l'Est-de-l'Île-de-Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Posaconazole; Voriconazole; Mucormycosis; Medicine; Mucorales; Aspergillosis; Fusariosis; Intensive care medicine; Aspergillus; Internal medicine; Antifungal; Fusarium; Immunology; Biology; Surgery; Dermatology; Microbiology","score_opus":0.020985120588115556,"score_gpt":0.34398641064388374,"score_spread":0.32300129005576816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396954757","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02966598,0.96267587,0.000008975497,0.00004139552,0.00033142907,0.006692537,0.00026436325,0.00023678112,0.00008269083],"genre_scores_gemma":[0.12852527,0.86995083,0.000006607918,0.00018973429,0.000105712206,0.0008766961,0.00020163192,0.00008031374,0.000063171916],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99414396,0.0012442627,0.0023946348,0.0012653442,0.0004649876,0.00048679498],"domain_scores_gemma":[0.9949415,0.0026608077,0.00088286743,0.00083244353,0.00022311906,0.00045926316],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007182835,0.0008010303,0.0058328714,0.00024338666,0.00015773752,0.000089124944,0.00016272053,0.0005602734,0.000058194422],"category_scores_gemma":[0.008969175,0.0004783718,0.0010906978,0.0010142701,0.00050482317,0.00017214502,0.00019828665,0.0016638358,0.00015258153],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025537844,0.0015044773,0.44642177,0.538512,0.0005427445,0.000050541792,0.0000063820235,6.811073e-8,7.0782447e-10,0.00006379397,0.00015711013,0.012715604],"study_design_scores_gemma":[0.0016191719,0.0029577627,0.16830601,0.7977132,0.025754934,0.00005557398,0.000018820716,0.0000011721584,7.601656e-9,0.0003840385,0.0024358153,0.00075346127],"about_ca_topic_score_codex":0.00006451676,"about_ca_topic_score_gemma":0.0005460015,"teacher_disagreement_score":0.27811578,"about_ca_system_score_codex":0.00027351928,"about_ca_system_score_gemma":0.00085162546,"threshold_uncertainty_score":0.99976677},"labels":[],"label_agreement":null},{"id":"W4398771069","doi":"10.1177/17534666241255203","title":"Combined medical-interventional approaches for the management of complex fungal balls: a case series as a viable alternative in non-surgical patients","year":2024,"lang":"en","type":"article","venue":"Therapeutic Advances in Respiratory Disease","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"South Health Campus; University of Alberta; University of Calgary","funders":"","keywords":"Medicine; Aspergilloma; Cohort; Debulking; Surgery; Multimodal therapy; Antifungal; Antifungal drug; Aspergillosis; Lung; Internal medicine; Cancer; Dermatology","score_opus":0.056743174330412954,"score_gpt":0.36350044424996253,"score_spread":0.30675726991954955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398771069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9703489,0.022943135,0.0022490849,0.0004885361,0.00023549041,0.0021665862,0.00013191337,0.000036196445,0.0014001437],"genre_scores_gemma":[0.9985346,0.0003607267,0.0000950576,0.00028310792,0.000049198992,0.00036855618,0.000024021067,0.000019582532,0.00026509943],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99823624,0.00010784293,0.00050747284,0.00037570894,0.00051946397,0.0002532849],"domain_scores_gemma":[0.9991343,0.0002960176,0.00007098547,0.00028471855,0.00006411624,0.00014986632],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058773515,0.00017911129,0.00031168727,0.00009653557,0.00006106586,0.000017059045,0.0001724929,0.000048197016,0.00028248774],"category_scores_gemma":[0.000042984433,0.00012197516,0.00018845931,0.0002637019,0.00035334865,0.00019863599,0.00006993693,0.00018142507,0.00000641265],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03915367,0.0084407,0.3873713,0.015600041,0.0013686233,0.020527372,0.0013407121,0.00094762875,0.000021761194,0.091711424,0.00014263598,0.43337414],"study_design_scores_gemma":[0.040396772,0.006241633,0.66280997,0.01119889,0.0014572861,0.0001651656,0.009723266,0.08793942,0.00022853527,0.057841495,0.12051869,0.0014788564],"about_ca_topic_score_codex":0.000007982728,"about_ca_topic_score_gemma":0.000054762197,"teacher_disagreement_score":0.4318953,"about_ca_system_score_codex":0.000111808426,"about_ca_system_score_gemma":0.00013615227,"threshold_uncertainty_score":0.49740025},"labels":[],"label_agreement":null},{"id":"W4398977677","doi":"10.1016/j.ajt.2024.05.016","title":"Invasive aspergillosis in liver transplant recipients in the current era","year":2024,"lang":"en","type":"article","venue":"American Journal of Transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Centre Hospitalier de l’Université de Montréal; University Health Network","funders":"Leonard M. Miller School of Medicine; Swiss Transplant Cohort Study; National Science Foundation; Washington University in St. Louis; Ochsner Health; University of Miami; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Medicine; Aspergillosis; Liver transplantation; Intensive care medicine; Current (fluid); Immunology; Internal medicine; Transplantation","score_opus":0.016661518125398865,"score_gpt":0.29965177794401965,"score_spread":0.2829902598186208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398977677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960334,0.0017569392,0.0006663818,0.000964183,0.00018226959,0.00014220717,0.000016309074,0.0000050171666,0.0002333492],"genre_scores_gemma":[0.98607796,0.013492703,0.00016812919,0.00016310326,0.00006734203,0.0000037463215,0.000013229502,0.0000075609983,0.0000062363897],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99880505,0.00015073037,0.00042546328,0.00012835722,0.0003456661,0.00014472276],"domain_scores_gemma":[0.9994667,0.0002719322,0.00008174084,0.00008129139,0.00004919247,0.000049131635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000536415,0.000095247335,0.00024386466,0.00027151112,0.000018540442,0.000018709392,0.00009471777,0.000020134368,0.000022762677],"category_scores_gemma":[0.000022932132,0.00006002802,0.00012395097,0.0005244374,0.00009410371,0.00016291584,0.0000011590607,0.0005458793,0.000007481215],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021632116,0.00032165984,0.6950081,0.00044336074,0.000061034498,0.002869163,0.02384999,0.000045250075,0.002520425,0.00013639443,0.000093702685,0.27248773],"study_design_scores_gemma":[0.00064336276,0.0005548409,0.99460185,0.0020722514,0.00014763186,0.00035070346,0.00076015433,0.000105049694,0.0004768947,0.000078042205,0.00013746218,0.00007176078],"about_ca_topic_score_codex":0.00010469498,"about_ca_topic_score_gemma":0.00059223536,"teacher_disagreement_score":0.29959375,"about_ca_system_score_codex":0.00009048548,"about_ca_system_score_gemma":0.0001953939,"threshold_uncertainty_score":0.24478716},"labels":[],"label_agreement":null},{"id":"W4399041302","doi":"10.1016/j.cmi.2024.05.013","title":"Cerebrospinal fluid galactomannan detection for the diagnosis of central nervous system aspergillosis: a diagnostic test accuracy systematic review and meta-analysis","year":2024,"lang":"en","type":"review","venue":"Clinical Microbiology and Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Regional Laboratory Medicine Program; McMaster University; University of Toronto; University Health Network; Hamilton Health Sciences; St. Joseph’s Healthcare Hamilton; Impact","funders":"Trinity College Dublin; McMaster University","keywords":"Galactomannan; Cerebrospinal fluid; Diagnostic accuracy; Aspergillosis; Diagnostic test; Meta-analysis; Medicine; Pathology; Radiology; Immunology; Pediatrics","score_opus":0.09742907864692009,"score_gpt":0.4053173486426158,"score_spread":0.30788826999569574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399041302","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000277245,0.993709,0.00022176812,0.00014775118,0.00028081625,0.005003317,0.00030246607,0.000051390427,0.000006229083],"genre_scores_gemma":[0.064312935,0.93374664,0.000009636279,0.00017504506,0.00010817351,0.0014383226,0.000105083825,0.000026761525,0.000077402496],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99591076,0.0007609953,0.0022588337,0.0007346469,0.000057383055,0.00027740625],"domain_scores_gemma":[0.98319787,0.014938414,0.0009613746,0.00057198707,0.00021294155,0.00011740478],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0019607167,0.0004604369,0.0069548073,0.00015265732,0.000171973,0.00003056032,0.00009907764,0.0006490011,0.000030663385],"category_scores_gemma":[0.014201591,0.00022671068,0.0038803376,0.0005214165,0.0003667489,0.000055723845,0.00007511812,0.0005766019,0.000013480528],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021744943,0.00014017483,0.0016401623,0.9223562,0.069349736,0.000002860393,0.0000064170245,7.2309334e-8,0.000003294525,0.000021750117,0.0002555611,0.006202031],"study_design_scores_gemma":[0.00014463165,0.0007804691,0.0018291813,0.048311517,0.9351095,0.00020574148,0.000009980912,0.0000116894635,0.000003658511,0.000003512933,0.013392475,0.00019764365],"about_ca_topic_score_codex":0.00004348903,"about_ca_topic_score_gemma":0.00011656038,"teacher_disagreement_score":0.87404466,"about_ca_system_score_codex":0.000090044196,"about_ca_system_score_gemma":0.00009851791,"threshold_uncertainty_score":0.9941022},"labels":[],"label_agreement":null},{"id":"W4399369749","doi":"10.21203/rs.3.rs-4415642/v1","title":"The first prevalence and antifungal susceptibility profile of Candida infections in Palestine, 2022","year":2024,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"","keywords":"Palestine; Antifungal; Microbiology; Medicine; Biology; Ancient history; History","score_opus":0.03868372750509932,"score_gpt":0.38607338206207537,"score_spread":0.34738965455697607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399369749","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98195285,0.010496336,0.0000032994471,0.0014481954,0.00024223138,0.0024836625,0.0003434423,0.000047497328,0.0029825144],"genre_scores_gemma":[0.99156076,0.004771538,0.00003480652,0.000006804278,0.00013889141,0.0002951019,0.000052059506,0.000029071825,0.0031109916],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99653876,0.00031272255,0.00058947905,0.00087425834,0.0010851243,0.0005996461],"domain_scores_gemma":[0.9966351,0.001218842,0.000090844645,0.0011716374,0.0007065982,0.00017701114],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.004356463,0.00024235196,0.00048972736,0.00031863523,0.00031086506,0.00009413571,0.00025091768,0.00031712142,0.0002122426],"category_scores_gemma":[0.003277507,0.00016869961,0.00017260388,0.00079392735,0.0010823288,0.000040780946,0.0012978285,0.0030497722,0.000026882053],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003332945,0.00028106084,0.9725803,0.020799067,0.000044200227,0.00005461554,0.0003891592,0.0000045510674,0.0004801929,0.0003467227,0.0027492202,0.001937607],"study_design_scores_gemma":[0.00034798155,0.00045702554,0.98992836,0.004247384,0.00004369241,0.0000112462885,0.00049596495,0.0005996768,0.00031406828,0.0023559248,0.001049244,0.00014944421],"about_ca_topic_score_codex":0.0017731137,"about_ca_topic_score_gemma":0.020560002,"teacher_disagreement_score":0.018786887,"about_ca_system_score_codex":0.0003647103,"about_ca_system_score_gemma":0.0013891589,"threshold_uncertainty_score":0.99925023},"labels":[],"label_agreement":null},{"id":"W4399477459","doi":"10.1093/mmy/myae061","title":"Clinical spectrum, phenotypic and molecular characterization, and antifungal susceptibility of an emerging human pathogen, <i>Acrophialophora</i>, from India","year":2024,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Science and Engineering Research Board; Department of Science and Technology, Government of Kerala; Indian Council of Medical Research","keywords":"Biology; Caspofungin; Ribosomal DNA; Fluconazole; Ribosomal RNA; Genotype; Locus (genetics); Microbiology; Internal transcribed spacer; Genotyping; Phylogenetic tree; Mycology; Antifungal; Genetics; Gene; Botany","score_opus":0.015630787532967715,"score_gpt":0.3360321471945771,"score_spread":0.3204013596616094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399477459","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99544805,0.0015260695,0.0010258637,0.0009890229,0.00039840926,0.00030727652,0.00010476984,0.000074940945,0.00012561576],"genre_scores_gemma":[0.99756306,0.0005504344,0.0003294819,0.0007359466,0.00040506167,0.0000066013235,0.00034268887,0.000026233645,0.00004051472],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973609,0.00036366825,0.0007940693,0.00077107863,0.00040162666,0.00030866862],"domain_scores_gemma":[0.9986918,0.0002889076,0.00009210948,0.000393545,0.00007268719,0.00046096058],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012922125,0.00019912957,0.00071203365,0.00010310395,0.00008047844,0.00001974741,0.00011575958,0.0004360647,0.0012310535],"category_scores_gemma":[0.00072852476,0.00016878707,0.000099136865,0.00022388545,0.0009278568,0.00009087614,0.00011819099,0.0005789581,0.000010054915],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025501364,0.00030873404,0.517704,0.00028990515,0.000101188154,0.0007411574,0.00027625894,1.802234e-8,0.44948375,0.0012023466,0.000052575153,0.029585022],"study_design_scores_gemma":[0.00087662484,0.00081855257,0.99251485,0.00015807322,0.0001532947,0.000042869433,0.00007318659,0.00028160107,0.002004732,0.0017826422,0.0011413672,0.00015221481],"about_ca_topic_score_codex":0.00009167539,"about_ca_topic_score_gemma":0.00016274797,"teacher_disagreement_score":0.4748108,"about_ca_system_score_codex":0.000027686167,"about_ca_system_score_gemma":0.00025370583,"threshold_uncertainty_score":0.99968195},"labels":[],"label_agreement":null},{"id":"W4399565753","doi":"10.1186/s12879-024-09477-9","title":"Compare the efficacy of antifungal agents as primary therapy for invasive aspergillosis: a network meta-analysis","year":2024,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Posaconazole; Voriconazole; Medicine; Aspergillosis; Meta-analysis; Internal medicine; Caspofungin; Randomized controlled trial; Anidulafungin; Observational study; Amphotericin B; Combination therapy; Itraconazole; Adverse effect; Antifungal; Immunology; Dermatology","score_opus":0.08023023949980983,"score_gpt":0.34817183655059464,"score_spread":0.2679415970507848,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399565753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93870234,0.056171704,0.0010112603,0.00018150272,0.00020993588,0.0016951305,0.000270268,0.00018370521,0.0015741278],"genre_scores_gemma":[0.99711645,0.00070682797,0.000060866198,0.0008602566,0.00026124134,0.0002136141,0.00018101088,0.000030153129,0.0005695753],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982528,0.0001804782,0.00042394781,0.00045390244,0.00039929574,0.00028959563],"domain_scores_gemma":[0.9972421,0.0016910124,0.00011638169,0.00059210893,0.00022272053,0.00013567416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003186983,0.00024612772,0.0010455297,0.00012703247,0.00019741656,0.00006367976,0.00013573424,0.000057665748,0.00074983435],"category_scores_gemma":[0.00041987363,0.00014190955,0.002876301,0.0008774999,0.00017863869,0.000083637984,0.000039707415,0.00012266937,0.000027178712],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012003992,0.00082018424,0.8878131,0.00073530944,0.095426664,0.000019112545,0.00015248371,0.0010120106,0.00012227696,0.0006607749,0.011571443,0.00046625125],"study_design_scores_gemma":[0.0009586615,0.0003148516,0.862188,0.000043901582,0.13390706,0.0000044159997,0.0000657815,0.0002625692,0.00015450317,0.0005661883,0.0013771356,0.00015693235],"about_ca_topic_score_codex":0.000082153274,"about_ca_topic_score_gemma":0.0002492701,"teacher_disagreement_score":0.05841409,"about_ca_system_score_codex":0.000070349786,"about_ca_system_score_gemma":0.00045592245,"threshold_uncertainty_score":0.8210161},"labels":[],"label_agreement":null},{"id":"W4399645802","doi":"10.7573/dic.2023-9-2","title":"Invasive fungal infections in critically ill children: epidemiology, risk factors and antifungal drugs","year":2024,"lang":"en","type":"article","venue":"Drugs in Context","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"","keywords":"Medicine; Critically ill; Antifungal; Intensive care medicine; Antifungal drugs; Epidemiology; Invasive candidiasis; Candida infections; Internal medicine; Fluconazole; Dermatology","score_opus":0.02029671019327811,"score_gpt":0.31294251884697655,"score_spread":0.29264580865369844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399645802","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900073,0.004752097,0.00009709845,0.0014834646,0.0003332353,0.000514774,0.00010578712,0.00009857294,0.0026076864],"genre_scores_gemma":[0.9969952,0.0011814213,0.000099864636,0.0011915951,0.00011723891,0.000025033687,0.00003698646,0.000027832799,0.00032479572],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.997634,0.00036321534,0.0006458308,0.0006847191,0.00016682855,0.0005053953],"domain_scores_gemma":[0.9959885,0.003272423,0.000051913816,0.00032828967,0.0001591412,0.00019973917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012822729,0.00027417875,0.00067909353,0.00033245856,0.000094602285,0.000032134252,0.000089561436,0.00025883503,0.00017742862],"category_scores_gemma":[0.007939454,0.0002234064,0.00016741334,0.00042675508,0.0004742924,0.00019858453,0.00007809724,0.0010409817,0.00006356125],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085972984,0.00016444175,0.98428524,0.00012786643,0.000058082493,0.000046587444,0.0024911307,0.000001606117,0.00015192447,0.0027285013,0.000614963,0.009243678],"study_design_scores_gemma":[0.0008947299,0.0001933924,0.9919168,0.00048570582,0.00006408271,0.00003125688,0.0036806627,0.00022902137,0.00023250109,0.0014090902,0.00064375764,0.00021903586],"about_ca_topic_score_codex":0.0021820539,"about_ca_topic_score_gemma":0.0035863123,"teacher_disagreement_score":0.009024642,"about_ca_system_score_codex":0.00017950975,"about_ca_system_score_gemma":0.00024031637,"threshold_uncertainty_score":0.9504842},"labels":[],"label_agreement":null},{"id":"W4399670810","doi":"10.1093/g3journal/jkae124","title":"The putative prenyltransferase Nus1 is required for filamentation in the human fungal pathogen <i>Candida albicans</i>","year":2024,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canadian Institute for Advanced Research","keywords":"Biology; Filamentation; Candida albicans; Fungal pathogen; Pathogen; Microbiology; Human pathogen; Prenyltransferase; Genetics; Gene","score_opus":0.031685713739316085,"score_gpt":0.3367116847493483,"score_spread":0.30502597101003226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399670810","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6049684,0.3843981,0.0024442961,0.0034680543,0.00033137633,0.0025973439,0.00058840227,0.00006029221,0.0011437115],"genre_scores_gemma":[0.97326136,0.022532692,0.000539512,0.0010830724,0.00031559548,0.0002194335,0.00020261061,0.00004058205,0.0018051369],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99822253,0.00012827301,0.00043621406,0.00043893204,0.00036702384,0.00040703037],"domain_scores_gemma":[0.9989641,0.00033827723,0.000046328496,0.00046782623,0.000106715794,0.00007679701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006316879,0.00021989305,0.00023579581,0.00006323639,0.00031550336,0.000137751,0.00023374349,0.00009443197,0.000054421478],"category_scores_gemma":[0.00001059625,0.00013418963,0.0001979547,0.00030056233,0.00021103038,0.000049576465,0.00001942848,0.0001691289,0.000019278961],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035972128,0.00014784276,0.03521084,0.00048629576,0.00021905066,0.00007281029,0.015774958,0.000053068987,0.20912872,0.0008649199,0.0031883477,0.73449343],"study_design_scores_gemma":[0.0034242577,0.0022367896,0.08015589,0.00025928495,0.0009438234,0.00007137486,0.01823235,0.0022477747,0.068986416,0.009507551,0.81304795,0.0008865723],"about_ca_topic_score_codex":0.000022395543,"about_ca_topic_score_gemma":0.0002995947,"teacher_disagreement_score":0.8098596,"about_ca_system_score_codex":0.000108430235,"about_ca_system_score_gemma":0.00022162333,"threshold_uncertainty_score":0.5472094},"labels":[],"label_agreement":null},{"id":"W4399740668","doi":"10.1093/ofid/ofae257","title":"Meeting the Therapeutic Challenges of Emergent and Rare Invasive Fungal Diseases Through Novel Clinical Trial Designs","year":2024,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Sick Kids Foundation; Omeros Corporation; Gilead Sciences; Astellas Pharma; Abbott Laboratories","keywords":"Medicine; Clinical trial; Intensive care medicine; Clinical study design; Aspergillosis; Mucormycosis; Randomized controlled trial; Rare disease; Antifungal; Disease; Medical physics; Pathology; Immunology; Dermatology","score_opus":0.13741457855782138,"score_gpt":0.40357300707269494,"score_spread":0.2661584285148736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399740668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88217336,0.09767765,0.0003277776,0.0050040227,0.0011034138,0.0036281096,0.0002872732,0.0001728161,0.009625604],"genre_scores_gemma":[0.98967326,0.009062646,0.000026581565,0.00059913524,0.00026543444,0.00013781458,0.000021001153,0.000034196386,0.00017995933],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998055,0.00021765828,0.00057487487,0.0005318976,0.0003122163,0.0003083443],"domain_scores_gemma":[0.9978944,0.001197048,0.00013326816,0.00046512563,0.00012268235,0.00018749118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041300154,0.00023325502,0.0005502124,0.00004160752,0.00026122946,0.00012815201,0.00021757776,0.00009532148,0.00017150829],"category_scores_gemma":[0.0009583135,0.00014520931,0.00036124286,0.00018074679,0.0003743636,0.0002933828,0.00026118621,0.00021371795,0.000013111729],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.02142243,0.004516031,0.88160473,0.0015073533,0.0018469522,0.00010971217,0.00095647736,0.000010313801,0.00043166388,0.03421431,0.005446309,0.04793371],"study_design_scores_gemma":[0.03528471,0.0071523446,0.9110792,0.0022597518,0.0040468196,0.000068955065,0.0079159625,0.0002555316,0.0004353468,0.020259656,0.010442934,0.00079879176],"about_ca_topic_score_codex":0.00011679486,"about_ca_topic_score_gemma":0.00035667903,"teacher_disagreement_score":0.1074999,"about_ca_system_score_codex":0.000044993907,"about_ca_system_score_gemma":0.000490227,"threshold_uncertainty_score":0.5921464},"labels":[],"label_agreement":null},{"id":"W4399781304","doi":"10.3390/siuj5030034","title":"Urinary Tract Obstruction Secondary to Fungal Balls: A Systematic Review","year":2024,"lang":"en","type":"review","venue":"Société Internationale d’Urologie Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Urinary system; Medicine; Internal medicine","score_opus":0.07899120691122033,"score_gpt":0.41265219121883173,"score_spread":0.3336609843076114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399781304","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005688407,0.98920417,0.00008936881,0.0010728746,0.0023843043,0.0023822617,0.0001362127,0.00011803773,0.0045559136],"genre_scores_gemma":[0.0002493761,0.985003,0.00019634626,0.0018423378,0.0012705754,0.00023142507,0.00015270487,0.00007026994,0.01098397],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99514264,0.0004880258,0.0021775258,0.00067347544,0.0010630379,0.00045530865],"domain_scores_gemma":[0.9971657,0.00050071115,0.0009294934,0.00056676276,0.00047413926,0.00036324226],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0019213329,0.0006448097,0.0034808256,0.00044563293,0.00015650122,0.00016065124,0.00060871925,0.0004635718,0.0015948734],"category_scores_gemma":[0.0022845538,0.00043350065,0.0024783267,0.00039800836,0.00008358333,0.00021504931,0.00018227565,0.0029270581,0.00083975785],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044052074,0.00026265596,0.00003960352,0.91363627,0.0014193527,0.0018529394,0.00004179212,1.9654901e-7,5.02815e-7,0.000091184455,0.017601682,0.0650098],"study_design_scores_gemma":[0.0002183133,0.0005146864,0.00011721488,0.5353507,0.008839789,0.021285558,0.00008950077,0.0000031886266,1.8179054e-7,0.00026796924,0.43296954,0.00034340925],"about_ca_topic_score_codex":0.000001685974,"about_ca_topic_score_gemma":0.000001403064,"teacher_disagreement_score":0.41536784,"about_ca_system_score_codex":0.001231114,"about_ca_system_score_gemma":0.0014468253,"threshold_uncertainty_score":0.9999382},"labels":[],"label_agreement":null},{"id":"W4399789966","doi":"10.1016/j.jcjo.2024.05.016","title":"Mucormycosis complicating optic perineuritis","year":2024,"lang":"en","type":"letter","venue":"Canadian Journal of Ophthalmology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Mucormycosis; Ophthalmology; Surgery","score_opus":0.039772167559853855,"score_gpt":0.3005419192026104,"score_spread":0.26076975164275656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399789966","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38057256,0.008849005,0.0000071885133,0.5459148,0.002228632,0.00027547835,0.00014732889,0.000011794272,0.061993156],"genre_scores_gemma":[0.91234654,0.0000186907,0.0006723692,0.069336995,0.0037769973,0.00000557064,0.000064653745,0.00009144358,0.013686731],"study_design_codex":"not_applicable","study_design_gemma":"case_report","domain_scores_codex":[0.9980234,0.0000889723,0.0007135723,0.00032862893,0.00024619946,0.0005992263],"domain_scores_gemma":[0.9981897,0.00014812945,0.00027145198,0.00041937694,0.00039136014,0.00057997054],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00027473542,0.00028543972,0.0009043108,0.0005560111,0.0000946728,0.000056711808,0.00031913974,0.00071026944,0.0037735905],"category_scores_gemma":[0.0003521067,0.0002544392,0.00046079943,0.00021515637,0.00030970338,0.000050649316,0.000021400645,0.0031413732,0.00019215391],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013462016,0.000006005594,0.0110408105,0.0004821505,0.00014103184,0.4306512,0.00005329011,3.2374152e-7,0.00003260498,0.000022595723,0.55743545,0.00012110914],"study_design_scores_gemma":[0.00021837813,0.0005707489,0.01382126,0.0007213557,0.00029710183,0.6622713,0.00005111517,0.0000072031135,0.000015810267,0.00034168834,0.3214718,0.00021221435],"about_ca_topic_score_codex":0.0015863669,"about_ca_topic_score_gemma":0.000094235606,"teacher_disagreement_score":0.531774,"about_ca_system_score_codex":0.00043408366,"about_ca_system_score_gemma":0.0028966463,"threshold_uncertainty_score":0.99999076},"labels":[],"label_agreement":null},{"id":"W4399790561","doi":"10.21203/rs.3.rs-4518632/v1","title":"Standardisation of high throughput microdilution antifungal susceptibility testing for Candida albicans and Cryptococcus neoformans","year":2024,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"","keywords":"Cryptococcus neoformans; Candida albicans; Broth microdilution; Microbiology; Antifungal; Biology; Antibiotics; Minimum inhibitory concentration","score_opus":0.08539144305404929,"score_gpt":0.4185749591622994,"score_spread":0.33318351610825014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399790561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98709464,0.0017859188,0.0017307089,0.00076626835,0.00026563273,0.0046199365,0.002136887,0.00010320701,0.0014967953],"genre_scores_gemma":[0.9952291,0.0002227441,0.0028401033,0.000015945821,0.00038139804,0.00024115603,0.00052540016,0.000057290425,0.00048685545],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9959019,0.00026324816,0.00076400023,0.0011197843,0.001183127,0.0007679385],"domain_scores_gemma":[0.99552107,0.0008858901,0.00017190984,0.00093961676,0.002234176,0.00024736804],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0038605353,0.00034583214,0.0008516903,0.0003518472,0.0003097206,0.00011857449,0.00018335776,0.0004967712,0.00012611401],"category_scores_gemma":[0.0026748076,0.000296924,0.00027896723,0.0004982746,0.00076786877,0.00008972922,0.0007614119,0.0016119945,0.000010078685],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0057107992,0.0008104876,0.7343623,0.09767665,0.0006382346,0.00007649296,0.0038751233,0.00011677292,0.090715505,0.005995277,0.009788591,0.05023375],"study_design_scores_gemma":[0.0025360826,0.0031875873,0.9165856,0.008857016,0.00045016044,0.000018300672,0.0031575304,0.0030293975,0.013385085,0.046315525,0.0018134464,0.00066425814],"about_ca_topic_score_codex":0.003025191,"about_ca_topic_score_gemma":0.0015875257,"teacher_disagreement_score":0.18222329,"about_ca_system_score_codex":0.00081120915,"about_ca_system_score_gemma":0.0020287589,"threshold_uncertainty_score":0.99994826},"labels":[],"label_agreement":null},{"id":"W4399799623","doi":"10.1038/s41564-024-01720-y","title":"Pan-drug resistance and hypervirulence in a human fungal pathogen are enabled by mutagenesis induced by mammalian body temperature","year":2024,"lang":"en","type":"article","venue":"Nature Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Caspofungin; Biology; Mutagenesis; Virulence; Microbiology; Pathogen; Mutant; Antifungal drug; Drug resistance; Fluconazole; Gene; Genetics; Antifungal","score_opus":0.005360128409902279,"score_gpt":0.2556320170327876,"score_spread":0.2502718886228853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399799623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93691117,0.058808006,0.000001325791,0.002496524,0.00022836638,0.0004577528,0.00067028444,0.00009709043,0.00032948135],"genre_scores_gemma":[0.9887899,0.0003948297,0.00007545321,0.0014786809,0.00011707182,0.000029303506,0.00044731642,0.00004331849,0.008624081],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977455,0.00021262122,0.00039653506,0.0009939014,0.000110750916,0.0005406487],"domain_scores_gemma":[0.99915916,0.00011128716,0.00007489621,0.00043120238,0.00009411818,0.0001293307],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00043169502,0.0003604508,0.0006291461,0.00014970632,0.00013826015,0.000054015833,0.00019332532,0.0010759851,0.00009528264],"category_scores_gemma":[0.000122677,0.00029332234,0.000109564426,0.00043678997,0.00017996445,0.000096880154,0.00007703712,0.0016494553,0.000018361947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002499045,0.00009492591,0.019535214,0.00044513933,0.00004542541,0.00035937756,0.00017878924,1.394033e-8,0.9181242,0.000090381254,0.060679723,0.00019690434],"study_design_scores_gemma":[0.0029150306,0.0003141104,0.1471208,0.001505759,0.00022386205,0.00030839207,0.0008554904,0.0000029759701,0.6513485,0.00023079588,0.19405143,0.0011228633],"about_ca_topic_score_codex":0.000051274725,"about_ca_topic_score_gemma":0.0010614354,"teacher_disagreement_score":0.26677573,"about_ca_system_score_codex":0.00015738097,"about_ca_system_score_gemma":0.00011654671,"threshold_uncertainty_score":0.9999519},"labels":[],"label_agreement":null},{"id":"W4399800186","doi":"10.1007/s00408-024-00717-y","title":"Efficacy of Biologics in Patients with Allergic Bronchopulmonary Aspergillosis: A Systematic Review and Meta-Analysis","year":2024,"lang":"en","type":"review","venue":"Lung","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"Guangdong Science and Technology Department","keywords":"Omalizumab; Allergic bronchopulmonary aspergillosis; Medicine; Mepolizumab; Exacerbation; Benralizumab; Immunoglobulin E; Internal medicine; Meta-analysis; Dupilumab; Adverse effect; Asthma; Dermatology; Immunology; Antibody; Eosinophil","score_opus":0.04745390851835728,"score_gpt":0.3455018192248634,"score_spread":0.2980479107065061,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399800186","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009577814,0.9958297,0.0000021427757,0.00003308895,0.000011066713,0.0037956173,0.0000770669,0.000019607778,0.00013592235],"genre_scores_gemma":[0.0022267671,0.9965377,0.000058537167,0.00009911384,0.0000064124824,0.00020414374,0.00020284037,0.000029569643,0.0006349347],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9972196,0.0003244248,0.0013207702,0.00059596146,0.0003407974,0.00019842417],"domain_scores_gemma":[0.9983619,0.00019727997,0.00047805172,0.00077938597,0.00009704403,0.000086335735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058694347,0.00044946268,0.010383942,0.00030910596,0.000017697277,0.000010161436,0.00014420912,0.0002039607,0.000101499085],"category_scores_gemma":[0.00022505887,0.00020817929,0.0020221164,0.0012992333,0.000077902056,0.00003242592,0.000073351206,0.00035813556,0.000012641112],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001961046,0.00013285498,0.000831871,0.89607435,0.102526285,0.000025017398,0.000012207288,1.2853651e-7,4.6097894e-9,0.000012069085,0.00005801929,0.00030760447],"study_design_scores_gemma":[0.00014537726,0.00009948332,0.0009721456,0.1519722,0.8455606,0.0000032082005,0.000005302016,0.0000022938598,6.9765314e-9,0.0000015177529,0.001068942,0.00016893932],"about_ca_topic_score_codex":0.000012494189,"about_ca_topic_score_gemma":0.000016864495,"teacher_disagreement_score":0.7441021,"about_ca_system_score_codex":0.00010112806,"about_ca_system_score_gemma":0.000095300915,"threshold_uncertainty_score":0.84893054},"labels":[],"label_agreement":null},{"id":"W4399850994","doi":"10.1016/j.nmni.2024.101444","title":"Evaluation of MMV Pandemic Response Box compounds to identify potent compounds against clinically relevant bacterial and fungal clinical isolates in vitro","year":2024,"lang":"en","type":"article","venue":"New Microbes and New Infections","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medicines for Malaria Venture; Indian Council of Medical Research","keywords":"In vitro; Microbiology; Pandemic; Biology; Coronavirus disease 2019 (COVID-19); Medicine; Infectious disease (medical specialty); Pathology; Biochemistry; Disease","score_opus":0.07219801303394328,"score_gpt":0.40989467739953017,"score_spread":0.3376966643655869,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399850994","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950015,0.0016213227,0.00032598968,0.0014555472,0.00070662703,0.0005440761,0.000032829375,0.000060925475,0.0002511836],"genre_scores_gemma":[0.9969605,0.0013728315,0.00057700806,0.0002604268,0.000364836,0.0000069749167,0.000031094558,0.000020620833,0.00040570876],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9975659,0.00043488797,0.0009860068,0.0005113852,0.0002632407,0.00023856868],"domain_scores_gemma":[0.9982762,0.00084207783,0.000092727634,0.0002682796,0.0002036009,0.00031711409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037627723,0.0001877979,0.00051313656,0.00017699078,0.00009689009,0.000094632735,0.000055139022,0.0002213314,0.00004891393],"category_scores_gemma":[0.0011456116,0.0001647711,0.00017474448,0.00031304586,0.00015374954,0.00013426809,0.00008483077,0.0004374383,0.000017629753],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0045383405,0.00029280572,0.11496508,0.00008179404,0.00011840979,0.0000095924015,0.0003848781,0.0000066108937,0.82195413,0.000012947665,0.004539928,0.05309547],"study_design_scores_gemma":[0.0044547888,0.0013890095,0.97382575,0.0007159495,0.0005604849,0.00011265804,0.00018761896,0.0008203072,0.0037829403,0.00051371055,0.013385136,0.00025165017],"about_ca_topic_score_codex":0.00039491386,"about_ca_topic_score_gemma":0.0008706524,"teacher_disagreement_score":0.8588607,"about_ca_system_score_codex":0.00015052663,"about_ca_system_score_gemma":0.0008526275,"threshold_uncertainty_score":0.6719171},"labels":[],"label_agreement":null},{"id":"W4400220129","doi":"10.1111/hdi.13172","title":"A rare presentation of isolated candidal hepatic abscess in a maintenance hemodialysis patient","year":2024,"lang":"en","type":"article","venue":"Hemodialysis International","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Hemodialysis; Surgery; Abscess; Abdominal ultrasonography; Fluconazole; Fistula; Diabetes mellitus; Internal medicine; Antifungal; Dermatology","score_opus":0.011530251099508579,"score_gpt":0.28485434270035837,"score_spread":0.2733240916008498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400220129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912812,0.00032905032,0.0032823177,0.00075372827,0.0003270141,0.0002684264,0.000067418594,0.00004436681,0.003646467],"genre_scores_gemma":[0.99809533,0.000106577594,0.0004343101,0.00012725276,0.000091339316,0.000042437616,0.00019292929,0.000016569791,0.0008932526],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981617,0.000061652085,0.0006068929,0.0003961018,0.0005781274,0.0001955382],"domain_scores_gemma":[0.99917114,0.00013950176,0.00010520105,0.00024799444,0.00026342826,0.00007274332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023581677,0.00014866299,0.0003746079,0.0004401303,0.000024152321,0.000038358758,0.00012598353,0.000087497894,0.00072486483],"category_scores_gemma":[0.00027610845,0.00012861849,0.00026638544,0.00062191737,0.00008016917,0.00017856646,0.00004457469,0.00018291992,0.000035405505],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026456607,0.0009205527,0.9026674,0.0007429315,0.0010520745,0.00057351624,0.005231979,0.00089792005,0.035543106,0.0013278093,0.0030007176,0.04539634],"study_design_scores_gemma":[0.003913485,0.00037197414,0.5406926,0.001897104,0.00067645946,0.00007279106,0.0013210154,0.42382482,0.021630153,0.0019404903,0.0030570754,0.00060198974],"about_ca_topic_score_codex":0.0004852551,"about_ca_topic_score_gemma":0.00062994065,"teacher_disagreement_score":0.4229269,"about_ca_system_score_codex":0.000306641,"about_ca_system_score_gemma":0.0001791255,"threshold_uncertainty_score":0.79367614},"labels":[],"label_agreement":null},{"id":"W4400290565","doi":"10.34119/bjhrv7n3-425","title":"Fusariose invasiva com manifestação cutânea durante tratamento quimioterápico de paciente com Leucemia Linfoide Aguda: relato de caso","year":2024,"lang":"pt","type":"article","venue":"Brazilian Journal of Health Review","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Air (Canada)","funders":"","keywords":"Humanities; Philosophy; Medicine","score_opus":0.048268460107435435,"score_gpt":0.37176639185921506,"score_spread":0.32349793175177965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400290565","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.043131314,0.89160466,0.0031163911,0.05801502,0.0018296093,0.0016678331,0.00014029218,0.00006391934,0.00043093855],"genre_scores_gemma":[0.39935017,0.57668984,0.00035938926,0.018040046,0.00047529352,0.000009477458,0.000029254074,0.000100527446,0.004945989],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.989261,0.0020730395,0.004758636,0.00077789044,0.0013393003,0.0017901781],"domain_scores_gemma":[0.9937871,0.0007322856,0.0017940953,0.0011148459,0.0005181999,0.0020534862],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.012295877,0.0008110898,0.0030625425,0.00037044619,0.00047219198,0.00022772748,0.00074061286,0.00040281325,0.0007735054],"category_scores_gemma":[0.0018464494,0.00066470116,0.0014105738,0.0010216552,0.0003371641,0.0005907136,0.00011996097,0.003421532,0.00043176336],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015555184,0.0012493659,0.074556634,0.27072793,0.0013268156,0.020053448,0.006721025,0.000009350358,0.0006253046,0.0009687929,0.36211824,0.26008758],"study_design_scores_gemma":[0.0037724555,0.0040638647,0.05263451,0.4101936,0.002593212,0.017518671,0.0025559089,0.00071758893,0.00015493772,0.0002813145,0.50438833,0.001125602],"about_ca_topic_score_codex":0.0001849733,"about_ca_topic_score_gemma":0.00023809711,"teacher_disagreement_score":0.35621884,"about_ca_system_score_codex":0.0027088833,"about_ca_system_score_gemma":0.010523633,"threshold_uncertainty_score":0.99958044},"labels":[],"label_agreement":null},{"id":"W4400457745","doi":"10.1128/mbio.01661-24","title":"Alternative ergosterol biosynthetic pathways confer antifungal drug resistance in the human pathogens within the <i>Mucor</i> species complex","year":2024,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; Astellas Pharma Global Development; Astellas Pharma; Canadian Institute for Advanced Research","keywords":"Ergosterol; Mucor circinelloides; Sterol; Biology; Microbiology; Drug resistance; Azole; Antifungal drug; Mucor; Aspergillus; Biochemistry; Cholesterol; Candida albicans; Antifungal","score_opus":0.05076644913166144,"score_gpt":0.29037315838377453,"score_spread":0.23960670925211308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400457745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9679343,0.0013754518,0.00008268895,0.0045684855,0.00030695612,0.0006871152,0.00012831953,0.00008856204,0.024828121],"genre_scores_gemma":[0.99209875,0.000064469896,0.000082652965,0.0016208456,0.0002383213,0.0000306078,0.000040347393,0.000029704417,0.0057942728],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99790025,0.00024051355,0.0004484005,0.00050486694,0.00054547464,0.00036050312],"domain_scores_gemma":[0.9986717,0.00034561427,0.00007753425,0.0007523746,0.000087697015,0.000065060325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011446446,0.0002554125,0.00034258483,0.00008025474,0.00027546973,0.00015724194,0.0003875965,0.00006991394,0.00026674388],"category_scores_gemma":[0.00011830624,0.00013554917,0.00018571057,0.00036118057,0.0005407433,0.00008306153,0.00007108727,0.0005520841,0.00012426925],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000614561,0.0006534325,0.1040313,0.00086074875,0.00024466342,0.0019716474,0.041642413,0.000004355187,0.55745107,0.24142367,0.05046644,0.00063569413],"study_design_scores_gemma":[0.0020667433,0.00033817274,0.82103705,0.0020309656,0.00034443446,0.00010932671,0.015318337,0.0008347648,0.031845443,0.024372991,0.10080512,0.0008966527],"about_ca_topic_score_codex":0.00010551562,"about_ca_topic_score_gemma":0.0033790169,"teacher_disagreement_score":0.7170057,"about_ca_system_score_codex":0.00010082846,"about_ca_system_score_gemma":0.00011082463,"threshold_uncertainty_score":0.55275345},"labels":[],"label_agreement":null},{"id":"W4400457748","doi":"10.1128/mbio.01535-24","title":"The spliceosome impacts morphogenesis in the human fungal pathogen <i>Candida albicans</i>","year":2024,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Genome Canada; Canadian Institutes of Health Research; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Filamentation; Spliceosome; Candida albicans; Biology; RNA splicing; Intron; Corpus albicans; Gene; Virulence; Genetics; Mutant; Microbiology; Cell biology; RNA","score_opus":0.015318768872311476,"score_gpt":0.30571682575175096,"score_spread":0.2903980568794395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400457748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98204106,0.0056691202,0.00001102073,0.00396783,0.00015733148,0.00038466675,0.00003729367,0.000057614805,0.007674083],"genre_scores_gemma":[0.9953028,0.00026207592,0.000011694453,0.001149094,0.00025928672,0.000033895943,0.000019282688,0.000020292622,0.0029415984],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99862146,0.000098550176,0.00025610373,0.00029511275,0.00035519563,0.00037360258],"domain_scores_gemma":[0.99905276,0.00022465848,0.000025884012,0.0005719687,0.00003595232,0.0000887609],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008522488,0.00015089082,0.00018918705,0.000047009315,0.00023736458,0.000117424606,0.0002236493,0.000077575234,0.00014277417],"category_scores_gemma":[0.00009203329,0.00007479885,0.00015411344,0.00037464034,0.0001488262,0.00006139348,0.000035743844,0.00029943194,0.00013402243],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003166203,0.00029765675,0.39538065,0.00040664978,0.00016382935,0.0015944144,0.0030739899,0.0000013284401,0.54443085,0.008492965,0.029590927,0.016250115],"study_design_scores_gemma":[0.00053532736,0.00027713596,0.87344617,0.0002107786,0.00012595941,0.00009433851,0.0012984629,0.00004996272,0.0034663451,0.0010851098,0.11920502,0.00020540885],"about_ca_topic_score_codex":0.00032259114,"about_ca_topic_score_gemma":0.001442147,"teacher_disagreement_score":0.54096454,"about_ca_system_score_codex":0.00010622091,"about_ca_system_score_gemma":0.00015162141,"threshold_uncertainty_score":0.30502087},"labels":[],"label_agreement":null},{"id":"W4400608832","doi":"10.1016/s2666-5247(24)00101-0","title":"Detection and characterisation of a sixth Candida auris clade in Singapore: a genomic and phenotypic study","year":2024,"lang":"en","type":"article","venue":"The Lancet Microbe","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":136,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Medical Research Council; Duke-NUS Medical School; Medical Research Council; Genome Institute of Singapore; University of British Columbia; Singapore General Hospital","keywords":"Candida auris; Clade; Biology; Phenotype; Genetics; Gene; Antifungal; Microbiology; Phylogenetics","score_opus":0.02064181708865918,"score_gpt":0.2799782833830778,"score_spread":0.2593364662944186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400608832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997096,0.0018839105,0.000044908636,0.00047004852,0.000046240315,0.00035685152,0.000007814589,0.00002035215,0.00007389683],"genre_scores_gemma":[0.99942327,0.00022545781,0.000026516394,0.00010173602,0.000100153404,0.0000068471954,0.0000028982047,0.000008023816,0.00010509093],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994689,0.00005100059,0.00015293612,0.00016354359,0.000055816112,0.00010778817],"domain_scores_gemma":[0.9997412,0.000045567456,0.000030170288,0.00014900166,0.000014002685,0.000020073685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029837704,0.000069615104,0.00021852997,0.000048554364,0.000032950695,0.00001924027,0.00002851261,0.00003345138,0.000011502552],"category_scores_gemma":[0.000027006798,0.000046778172,0.000016889613,0.00010864335,0.00006345827,0.00003898567,0.000028318484,0.00014974414,0.000002370042],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004154436,0.000051869352,0.25219572,0.00022825741,0.000030394858,0.000009782546,0.0049701175,2.3387098e-7,0.73134464,0.000013948908,0.0000354828,0.010704093],"study_design_scores_gemma":[0.0006481607,0.00016306176,0.993774,0.00010602779,0.00005718909,0.000015202429,0.0006909007,0.00016087628,0.0038474628,0.00012574685,0.00036467164,0.000046684225],"about_ca_topic_score_codex":0.00031437573,"about_ca_topic_score_gemma":0.001133269,"teacher_disagreement_score":0.7415783,"about_ca_system_score_codex":0.000048040016,"about_ca_system_score_gemma":0.000032469838,"threshold_uncertainty_score":0.19075584},"labels":[],"label_agreement":null},{"id":"W4400641612","doi":"10.1101/2024.02.22.24302918","title":"Genomic reconstruction of an azole-resistant <i>Candida parapsilosis</i> outbreak and the creation of a multilocus sequence typing scheme: a retrospective observational and genomic epidemiology study","year":2024,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Bundesministerium für Bildung und Forschung; Robert Koch Institut; Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology; Deutsche Forschungsgemeinschaft; Friedrich-Schiller-Universität Jena; Pfizer","keywords":"Candida parapsilosis; Multilocus sequence typing; Typing; Epidemiology; Molecular epidemiology; Biology; Genetics; Outbreak; Genotyping; Medicine; Virology; Gene; Genotype; Candida albicans; Internal medicine","score_opus":0.06568213023926765,"score_gpt":0.34279491261827494,"score_spread":0.27711278237900727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400641612","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99334484,0.004260476,0.000077239594,0.00043386142,0.0002133939,0.0014160435,0.0001157194,0.000026765261,0.00011167266],"genre_scores_gemma":[0.9971556,0.00075607066,0.0017316139,0.00006286378,0.00009585183,0.00008154192,0.000035777968,0.00002336404,0.000057315337],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99741215,0.00048921956,0.0009744356,0.0007416037,0.00019096873,0.00019162058],"domain_scores_gemma":[0.99799156,0.00046340597,0.0006019307,0.00057339686,0.00028331362,0.00008638307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00261301,0.00026760274,0.0010806425,0.00013371029,0.0000910218,0.000013941442,0.00012770946,0.0002176407,0.000013851917],"category_scores_gemma":[0.0010054185,0.0001916239,0.00013725365,0.00013520215,0.0009837335,0.00005172113,0.00029487044,0.00061514054,9.903505e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022557618,0.00010502186,0.96091515,0.0007846325,0.00031396266,0.000004931743,0.0012789858,0.000017497274,0.03153898,0.0009629025,0.0000035445983,0.0018186312],"study_design_scores_gemma":[0.001473402,0.00028391296,0.9808808,0.00043528219,0.00044114026,0.000022981712,0.00097359344,0.00416291,0.0005059055,0.010669181,0.000008304531,0.0001426079],"about_ca_topic_score_codex":0.001248191,"about_ca_topic_score_gemma":0.00045799033,"teacher_disagreement_score":0.03103307,"about_ca_system_score_codex":0.0001910831,"about_ca_system_score_gemma":0.00030131126,"threshold_uncertainty_score":0.7814196},"labels":[],"label_agreement":null},{"id":"W4400799171","doi":"10.22541/au.172126094.46863127/v1","title":"Mucormycosis in a Pediatric Oncology Population - Review of Cases and the Literature","year":2024,"lang":"en","type":"preprint","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Ottawa","funders":"","keywords":"Mucormycosis; Pediatric oncology; Medicine; Intensive care medicine; Oncology; Population; Internal medicine; Cancer; Pathology; Environmental health","score_opus":0.021613360486379764,"score_gpt":0.3470700553389021,"score_spread":0.3254566948525224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400799171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56595474,0.4267201,0.0000013659638,0.0032129355,0.00012494657,0.00078649935,0.000019124842,0.000014490696,0.0031657421],"genre_scores_gemma":[0.7275441,0.2711228,0.00009014247,0.00059352873,0.00009326813,0.000027507076,0.00006174871,0.000005778937,0.00046106576],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989009,0.00013346724,0.00045904407,0.00027083355,0.00014960043,0.00008619031],"domain_scores_gemma":[0.9990755,0.00037845422,0.00011311936,0.0003061267,0.00009463053,0.00003216896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078739016,0.00012481745,0.00063694466,0.00010466257,0.000010914531,0.000009964298,0.00004967553,0.00021778805,0.00007082893],"category_scores_gemma":[0.0010066414,0.00006489725,0.00014619867,0.00025097464,0.000055197925,0.000013218227,0.00021364333,0.00064501393,0.0000031948953],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010535705,0.00021540295,0.60731304,0.35599557,0.00009195853,0.0004727078,0.00117844,4.7429086e-7,0.000008108644,0.0071529225,0.008810396,0.017707415],"study_design_scores_gemma":[0.0015945913,0.00025104772,0.91787183,0.06526425,0.0017385024,0.0001923058,0.00017293738,0.00010466573,0.000012171536,0.011298469,0.0012528731,0.0002463742],"about_ca_topic_score_codex":0.00052801945,"about_ca_topic_score_gemma":0.000596246,"teacher_disagreement_score":0.31055877,"about_ca_system_score_codex":0.00007168103,"about_ca_system_score_gemma":0.00017703752,"threshold_uncertainty_score":0.28023005},"labels":[],"label_agreement":null},{"id":"W4400896794","doi":"10.1101/2024.07.21.604487","title":"Mutational landscape and molecular bases of echinocandin resistance in <i>Saccharomyces cerevisiae</i>","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fonds de Recherche du Québec - Santé; Genome Canada","keywords":"Echinocandins; Drug resistance; Echinocandin; Biology; Mutation; Genetics; Computational biology; Resistance (ecology); Gene; Microbiology; Antifungal","score_opus":0.009757983001194457,"score_gpt":0.2393149712849107,"score_spread":0.22955698828371623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400896794","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.976018,0.022074392,0.000095820724,0.000545224,0.00018651572,0.0005644193,0.00029351146,0.00009587818,0.00012625662],"genre_scores_gemma":[0.9957184,0.0006721097,0.0031952127,0.00017489542,0.00010219598,0.000053502128,0.0000010418605,0.00006525858,0.000017368751],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976715,0.00008859221,0.0006176885,0.0008623282,0.00044515336,0.00031472652],"domain_scores_gemma":[0.9985501,0.000104662126,0.00021847432,0.00069018884,0.00026034043,0.00017620792],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005502472,0.0003804875,0.0007665532,0.00030598647,0.000037651447,0.00006315556,0.00016527118,0.00032614538,0.000060682753],"category_scores_gemma":[0.00029932678,0.00036743443,0.00015235535,0.00045338244,0.00016969557,0.00005910716,0.00025688874,0.00071508886,0.00001164403],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052620075,0.00029950924,0.38417178,0.0118749,0.00028722722,0.0010961313,0.0000459488,0.000012243833,0.5941966,0.006598678,0.00088714936,0.000003587636],"study_design_scores_gemma":[0.0013357275,0.00010576367,0.778469,0.007054347,0.0004146268,9.98158e-8,0.00002201636,0.00022026751,0.21021548,0.00018831043,0.0012029724,0.0007713881],"about_ca_topic_score_codex":0.000034254157,"about_ca_topic_score_gemma":0.00002739711,"teacher_disagreement_score":0.3942972,"about_ca_system_score_codex":0.000120145196,"about_ca_system_score_gemma":0.0007182906,"threshold_uncertainty_score":0.99987775},"labels":[],"label_agreement":null},{"id":"W4401044671","doi":"10.1016/j.mpdhp.2024.07.004","title":"A histopathological approach to diagnosis and classification of invasive fungal infections","year":2024,"lang":"en","type":"article","venue":"Diagnostic histopathology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Thomas Hospital","funders":"","keywords":"Pathology; Biology; Medicine","score_opus":0.037501617711482166,"score_gpt":0.29940203016510164,"score_spread":0.2619004124536195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401044671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97879046,0.0031817665,0.005023496,0.00092072395,0.00029415946,0.0005919974,0.00003790764,0.00011683863,0.01104264],"genre_scores_gemma":[0.99687093,0.00052594626,0.0013552976,0.0003322634,0.000082417086,0.00035913533,0.00003079874,0.000018118459,0.0004250803],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99861103,0.0001158397,0.0003508105,0.00054523506,0.00015330758,0.0002237851],"domain_scores_gemma":[0.99785906,0.0014895983,0.00004630034,0.00031806904,0.000113729126,0.00017324793],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034659606,0.00015738438,0.00040043565,0.00024825992,0.000074108386,0.000011520531,0.000065010354,0.00017640447,0.0000727852],"category_scores_gemma":[0.0055273287,0.00013545091,0.00010333129,0.00034804275,0.0003734818,0.00005688128,0.0000542985,0.0002501034,0.00008481384],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007960923,0.00090456597,0.9451231,0.00065291265,0.000014594915,0.0005414438,0.0018648948,0.0000038704397,0.017035263,0.018077347,0.006656271,0.009046132],"study_design_scores_gemma":[0.0002159653,0.0007756519,0.9902457,0.00016300923,0.00016364672,0.0005398235,0.00020034262,0.00006093763,0.00031973937,0.0004304036,0.0067494535,0.00013533913],"about_ca_topic_score_codex":0.000018257662,"about_ca_topic_score_gemma":0.000031984626,"teacher_disagreement_score":0.045122594,"about_ca_system_score_codex":0.00013023395,"about_ca_system_score_gemma":0.00015345092,"threshold_uncertainty_score":0.6617128},"labels":[],"label_agreement":null},{"id":"W4401159514","doi":"10.20944/preprints202407.2129.v1","title":"Global Health Alert: Racing to Control Antimicrobial Resistant Candida auris and Waste Using UVC LED Technology","year":2024,"lang":"en","type":"preprint","venue":"Preprints.org","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Candida auris; Antimicrobial; Infection control; Microbiology; Biology; Medicine; Antifungal; Intensive care medicine","score_opus":0.0547909555508851,"score_gpt":0.38147012346062037,"score_spread":0.3266791679097353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401159514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9840208,0.0016400536,0.00087047846,0.008871184,0.0007778399,0.0020943198,0.00031971728,0.0003460613,0.0010595012],"genre_scores_gemma":[0.9966695,0.00024174535,0.0009089337,0.0010892465,0.0003119971,0.00004559167,0.000030227078,0.000066294415,0.00063651596],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9954852,0.00017131378,0.0010684071,0.0019698108,0.00044330794,0.00086195086],"domain_scores_gemma":[0.9972442,0.000062200255,0.00033386375,0.0016072138,0.00025693266,0.0004955906],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012609044,0.00060178357,0.0015237714,0.00037398213,0.00023489678,0.000054489312,0.00034010137,0.0006593991,0.000113373564],"category_scores_gemma":[0.00064277375,0.00058031443,0.00028601268,0.0005350441,0.0002803079,0.00004416282,0.0021327275,0.0013417858,0.00017470872],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027340401,0.00020975624,0.8798472,0.003578375,0.00064908405,0.00038504423,0.00086173567,0.00040191476,0.108383425,0.00039548855,0.0005561865,0.001997697],"study_design_scores_gemma":[0.008749597,0.0006346716,0.89857143,0.018996973,0.0020191309,0.0005318738,0.0021270707,0.0035127508,0.049871366,0.008299183,0.0038894035,0.0027965223],"about_ca_topic_score_codex":0.0025237452,"about_ca_topic_score_gemma":0.0014918597,"teacher_disagreement_score":0.05851206,"about_ca_system_score_codex":0.0014649482,"about_ca_system_score_gemma":0.001855127,"threshold_uncertainty_score":0.99966484},"labels":[],"label_agreement":null},{"id":"W4401223846","doi":"10.1038/s41467-024-50740-z","title":"Addendum: A small molecule produced by Lactobacillus species blocks Candida albicans filamentation by inhibiting a DYRK1-family kinase","year":2024,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Canadian Institute of Mining, Metallurgy and Petroleum; University of Toronto","funders":"","keywords":"Filamentation; Candida albicans; Addendum; Microbiology; Kinase; Biology; Chemistry; Cell biology; Physics","score_opus":0.02595020385986581,"score_gpt":0.3031882820293737,"score_spread":0.2772380781695079,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401223846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90401363,0.052157614,0.00021036937,0.014597357,0.00019805988,0.0009981747,0.00073307386,0.00036129312,0.026730407],"genre_scores_gemma":[0.988376,0.0009414376,0.0008316396,0.0013315544,0.00009516337,0.000091078386,0.0013490116,0.00003464238,0.006949477],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985235,0.00012336398,0.00034507335,0.00042073108,0.00030473134,0.00028264808],"domain_scores_gemma":[0.9980777,0.00026775023,0.000074376105,0.0012324082,0.00020860233,0.0001391651],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029191468,0.00020945254,0.0002539173,0.000098594915,0.00028707425,0.00010430727,0.00037828131,0.00025913084,0.00013163594],"category_scores_gemma":[0.00042753603,0.00019065844,0.00012703335,0.000563421,0.0001984575,0.00011258478,0.00015653268,0.0013078257,0.000031436226],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006091848,0.00030696698,0.0052618063,0.00011326283,0.000101574595,0.000014936566,0.0007718477,2.7343867e-7,0.7576615,0.0010696738,0.23284473,0.001792523],"study_design_scores_gemma":[0.0020089166,0.00042584716,0.025967142,0.0014082909,0.00067986175,0.000032268716,0.0050442135,0.0010910151,0.22934465,0.00013511976,0.7328482,0.0010144418],"about_ca_topic_score_codex":0.00021786906,"about_ca_topic_score_gemma":0.001064985,"teacher_disagreement_score":0.52831686,"about_ca_system_score_codex":0.00030810307,"about_ca_system_score_gemma":0.00029425765,"threshold_uncertainty_score":0.77748257},"labels":[],"label_agreement":null},{"id":"W4401288071","doi":"10.1016/j.xpro.2024.103245","title":"Protocol to evaluate translation inhibition in Candida species using fluorescence microscopy and flow cytometry","year":2024,"lang":"en","type":"article","venue":"STAR Protocols","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canada Research Chairs; Canadian Institute for Advanced Research","keywords":"Flow cytometry; Fluorescence microscope; Fluorescence; Translation (biology); Protocol (science); Chemistry; Combinatorial chemistry; Alkyne; Biophysics; Biochemistry; Biology; Molecular biology; Catalysis; Pathology; Medicine; Optics; Physics","score_opus":0.0764151605368755,"score_gpt":0.41922732258100603,"score_spread":0.34281216204413056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401288071","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33044767,0.000018307155,0.0021832793,0.00027968487,0.000021087884,0.66664535,0.000029548615,0.000063421634,0.00031167147],"genre_scores_gemma":[0.28891906,0.0000010679265,0.014944785,0.00009118449,0.0001021203,0.695717,0.000009778254,0.000025318084,0.00018970444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99857074,0.00007566856,0.00033723636,0.00041845514,0.00033549717,0.00026242828],"domain_scores_gemma":[0.9995423,0.000037787067,0.0000282148,0.00020084284,0.00007644226,0.00011440599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006363614,0.00016102706,0.00024952524,0.0002415175,0.00006354371,0.00009508722,0.00003082406,0.00008611747,0.0001561021],"category_scores_gemma":[0.00008238435,0.00013494476,0.000049263093,0.0005916512,0.00007683155,0.00019760689,0.00002201668,0.00021085795,0.000020192134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018790092,0.000109396125,0.03260279,0.0030615095,0.000013135523,0.000117711665,0.0012893572,0.000016720986,0.94600636,0.000040549843,0.00022840785,0.014635049],"study_design_scores_gemma":[0.0079348115,0.0024863183,0.2622704,0.017967282,0.00008033043,0.00007363673,0.0006411569,0.033616595,0.6463929,0.001340293,0.026317993,0.00087834586],"about_ca_topic_score_codex":0.00006363462,"about_ca_topic_score_gemma":0.00016887893,"teacher_disagreement_score":0.2996135,"about_ca_system_score_codex":0.00022828465,"about_ca_system_score_gemma":0.00026844683,"threshold_uncertainty_score":0.55028874},"labels":[],"label_agreement":null},{"id":"W4401412045","doi":"10.1016/j.celrep.2024.114601","title":"Functional genomic analysis of genes important for Candida albicans fitness in diverse environmental conditions","year":2024,"lang":"en","type":"article","venue":"Cell Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto","funders":"National Human Genome Research Institute; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Genome Canada; Ontario Genomics; Canadian Institutes of Health Research; National Institutes of Health; University of Minnesota","keywords":"Candida albicans; Biology; Gene; Corpus albicans; Computational biology; Genetics; Virulence; Saccharomyces cerevisiae; Function (biology)","score_opus":0.016079004032227586,"score_gpt":0.26507431827136885,"score_spread":0.24899531423914126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401412045","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99705833,0.0014104323,0.00026457958,0.000034276705,0.00017285261,0.0002602453,0.0002144675,0.000013696244,0.00057113334],"genre_scores_gemma":[0.99609345,0.00012791976,0.000055931265,0.000027138189,0.000038909,0.000028554368,0.0007507566,0.0000092926075,0.0028680637],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989623,0.000008859708,0.00043677006,0.00029861522,0.00016063252,0.00013282314],"domain_scores_gemma":[0.9995384,0.000060031438,0.00009135007,0.00022715548,0.00001656806,0.00006650023],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001960171,0.00008644395,0.00027435008,0.00019704027,0.00003706965,0.0000062677113,0.000019061139,0.00005222477,0.0015553616],"category_scores_gemma":[0.000018862118,0.00007617351,0.0002543803,0.00022403261,0.00008962688,0.000037587997,0.000015542955,0.00006224686,0.0000031544726],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059498612,0.0001342178,0.8870008,0.0001153807,0.00028948893,0.0006331534,0.00011859494,0.00016958729,0.110624686,0.000028003615,0.0006309831,0.00019560618],"study_design_scores_gemma":[0.00019632383,0.000051141426,0.98972106,0.000023291415,0.001200597,0.00002802336,0.00038997293,0.0008972885,0.005062881,0.00012058938,0.0022250197,0.00008383821],"about_ca_topic_score_codex":0.00015087011,"about_ca_topic_score_gemma":0.0004854185,"teacher_disagreement_score":0.1055618,"about_ca_system_score_codex":0.00014271177,"about_ca_system_score_gemma":0.00016043635,"threshold_uncertainty_score":0.99935734},"labels":[],"label_agreement":null},{"id":"W4401476273","doi":"10.1093/infdis/jiae375","title":"Characterization of the Spatiotemporal Localization of a Pan-Mucorales–Specific Antigen During Germination and Immunohistochemistry","year":2024,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Directorate for Biological Sciences; Medical Research Council Canada; University of Aberdeen; Lister Institute of Preventive Medicine; Medical Research Council Centre for Medical Mycology; Biotechnology and Biological Sciences Research Council; University of Exeter; National Institute for Health and Care Research; Wellcome Trust; National University of Sciences and Technology; National Science Foundation","keywords":"Mucorales; Immunohistochemistry; Monoclonal antibody; Mucormycosis; Antigen; Biology; Histopathology; Pathology; Antibody; Medicine; Immunology","score_opus":0.006577386753603969,"score_gpt":0.25151222274777907,"score_spread":0.2449348359941751,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401476273","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99544567,0.0031505823,0.0010001641,0.000095162504,0.00011234863,0.00012782938,0.000014413821,0.000008976775,0.00004488013],"genre_scores_gemma":[0.99850893,0.0013271815,0.0000027375374,0.000011000205,0.00008334734,6.2303565e-7,0.0000063559837,0.000007839847,0.000051997325],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992668,0.000060474486,0.00034251882,0.000057818048,0.00021684435,0.00005553621],"domain_scores_gemma":[0.99925166,0.000049676833,0.0002959319,0.00013674647,0.00023824241,0.000027733284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018664458,0.00006622714,0.0001619318,0.00005736531,0.00006728786,0.000011381279,0.000050588103,0.00003418178,0.00002162959],"category_scores_gemma":[0.00010792682,0.000038006998,0.0000956324,0.00019084763,0.00014804136,0.000117739546,0.00001782821,0.00009675128,3.4004682e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025010033,0.00008142663,0.31421098,0.00054634135,0.000043290358,0.000003917702,0.00032257123,0.0000100568905,0.68318564,0.000021629412,0.000017933318,0.0013060763],"study_design_scores_gemma":[0.00027642798,0.00010207829,0.8899705,0.0006381737,0.00013767804,0.00006757875,0.00009957629,0.00014520617,0.10838603,0.00011268741,0.00002897007,0.000035095796],"about_ca_topic_score_codex":0.000011238916,"about_ca_topic_score_gemma":0.0000018126636,"teacher_disagreement_score":0.5757595,"about_ca_system_score_codex":0.00006032444,"about_ca_system_score_gemma":0.00011838512,"threshold_uncertainty_score":0.15498804},"labels":[],"label_agreement":null},{"id":"W4401918502","doi":"10.1038/s41564-024-01782-y","title":"Aspergillus fumigatus conidial surface-associated proteome reveals factors for fungal evasion and host immunity modulation","year":2024,"lang":"en","type":"article","venue":"Nature Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Medical Research Council; Manchester Biomedical Research Centre; Universidade de São Paulo; Canadian Institutes of Health Research; Azrieli Foundation; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Deutsche Forschungsgemeinschaft; Macquarie University; Fundação de Amparo à Pesquisa do Estado de São Paulo; National Institutes of Health; U.S. Department of Health and Human Services; International Development Research Centre; National Centre for the Replacement, Refinement and Reduction of Animals in Research; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; National Institute for Health and Care Research; Wellcome Trust","keywords":"Aspergillus fumigatus; Biology; Microbiology; Proteome; Aspergillus; Aspergillosis; Pathogen; Fungal protein; Gene; Immune system; Pathogenic fungus; Immunology; Mutant; Genetics","score_opus":0.01441541560540979,"score_gpt":0.2897751523039169,"score_spread":0.27535973669850716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401918502","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916623,0.0051847612,0.00006882943,0.0005849795,0.0006565295,0.0011791757,0.00044590942,0.00012080834,0.0000967083],"genre_scores_gemma":[0.9974441,0.00010451791,0.00019670906,0.00018266936,0.00011063871,0.000010561877,0.0007607257,0.00002599626,0.0011640993],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99873185,0.00013542126,0.00027898053,0.00044507394,0.000068562316,0.00034013428],"domain_scores_gemma":[0.99907637,0.00035585917,0.00006419032,0.00021500152,0.00020415457,0.000084435094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049236906,0.00021421241,0.00044650122,0.00007444918,0.00015679916,0.000026949105,0.000067022534,0.0009917701,0.000050815204],"category_scores_gemma":[0.0007231331,0.0001611014,0.000146494,0.00018056855,0.0001568134,0.00007345161,0.00004485176,0.0008530668,0.00000777773],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004823504,0.000059012575,0.058108572,0.00023418006,0.00011178006,0.000010270869,0.00021573465,8.539331e-7,0.93926424,0.00017551244,0.0010361455,0.00030135154],"study_design_scores_gemma":[0.0020764081,0.0010518734,0.89063865,0.00041363892,0.00021132528,0.000072852534,0.0001890572,0.00028535584,0.09808669,0.0004006869,0.0061873076,0.00038616324],"about_ca_topic_score_codex":0.00003826429,"about_ca_topic_score_gemma":0.00011361768,"teacher_disagreement_score":0.8411775,"about_ca_system_score_codex":0.00020603875,"about_ca_system_score_gemma":0.00013054295,"threshold_uncertainty_score":0.7649439},"labels":[],"label_agreement":null},{"id":"W4402036270","doi":"10.1371/journal.ppat.1012497","title":"Step-wise evolution of azole resistance through copy number variation followed by KSR1 loss of heterozygosity in Candida albicans","year":2024,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"H2020 European Research Council; Agence Nationale de la Recherche; University of Minnesota; National Institute of Allergy and Infectious Diseases; European Commission; Jane Coffin Childs Memorial Fund for Medical Research; Canadian Institute for Advanced Research; Burroughs Wellcome Fund; U.S. Department of Veterans Affairs","keywords":"Loss of heterozygosity; Candida albicans; Azole; Biology; Copy-number variation; Genetics; Microbiology; Antifungal; Gene; Allele; Genome","score_opus":0.012077947914334202,"score_gpt":0.2700774736099854,"score_spread":0.2579995256956512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402036270","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910388,0.0012366693,0.0038265474,0.0002024005,0.00011694012,0.00042422247,0.00046743307,0.000044483382,0.002642499],"genre_scores_gemma":[0.99758863,0.00014117657,0.001061357,0.000037890324,0.000041808195,0.000019068326,0.000061930215,0.000022342847,0.0010258203],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983018,0.000099101846,0.00052214507,0.00038334512,0.00044321537,0.0002504101],"domain_scores_gemma":[0.99913895,0.00011855877,0.00011965406,0.00039919655,0.00015661711,0.00006702754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002856663,0.00015978036,0.00045665115,0.00005811517,0.000036413847,0.0000081906655,0.00008450468,0.00014233515,0.0001869495],"category_scores_gemma":[0.00016651663,0.00014812543,0.00015179126,0.00047349188,0.00012191863,0.00014971086,0.00002695618,0.0001880257,0.000020452899],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006751858,0.00052384485,0.6937247,0.001132476,0.00009898883,0.00006544404,0.0015512039,0.0000033928263,0.29927242,0.00088998,0.0020052732,0.000057095094],"study_design_scores_gemma":[0.0026750693,0.00033954196,0.92929775,0.0023206125,0.0005751752,0.000008867859,0.00078971573,0.0011460846,0.058932766,0.0014739006,0.0019854892,0.00045501662],"about_ca_topic_score_codex":0.0005615669,"about_ca_topic_score_gemma":0.0015369683,"teacher_disagreement_score":0.24033964,"about_ca_system_score_codex":0.00035658275,"about_ca_system_score_gemma":0.00022423884,"threshold_uncertainty_score":0.60403794},"labels":[],"label_agreement":null},{"id":"W4402069975","doi":"10.3389/fcimb.2024.1434939","title":"Small molecule inhibitors of fungal Δ(9) fatty acid desaturase as antifungal agents against Candida auris","year":2024,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Université de Montréal; Université Laval; Montreal Heart Institute","funders":"Centers for Disease Control and Prevention; Institut de Cardiologie de Montréal; Public Health Agency; Public Health Agency of Canada","keywords":"Candida auris; Microbiology; Candida albicans; Galleria mellonella; Biology; Pathogen; Biofilm; Fungal pathogen; Caspofungin; Human pathogen; Corpus albicans; Antimicrobial; Virulence; Amphotericin B; Antifungal; Biochemistry; Bacteria; Gene","score_opus":0.01140813516762624,"score_gpt":0.2409143977510503,"score_spread":0.22950626258342408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402069975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863319,0.0071092146,0.0035771185,0.000073593284,0.0016341863,0.00032977932,0.000039077244,0.000052289928,0.00085283135],"genre_scores_gemma":[0.9975139,0.0011345242,0.00051637634,0.00015848593,0.000099953504,0.000007656338,0.00016201254,0.000021420925,0.00038566889],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99864995,0.0001248933,0.00039936605,0.00045944084,0.000059273334,0.00030706884],"domain_scores_gemma":[0.9995465,0.000022189499,0.000065888926,0.00020065825,0.00006155863,0.00010320496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029687164,0.00020861732,0.00043127223,0.00031572138,0.00006458006,0.00001987971,0.000049180737,0.00030142142,0.00008147427],"category_scores_gemma":[0.000055808858,0.00018472262,0.0001635926,0.00031398018,0.00027021082,0.00007434782,0.000048009555,0.0003936939,0.0000153715],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015345859,0.00008588497,0.40963784,0.00026459762,0.000081357575,0.00012985918,0.00015822302,0.000001739567,0.58089787,0.000018107809,0.004874378,0.0036966677],"study_design_scores_gemma":[0.0014016241,0.00050839235,0.04747184,0.00028732396,0.00012648657,0.000116921765,0.00028533328,0.00025412333,0.9386891,0.00008048718,0.010489782,0.00028855135],"about_ca_topic_score_codex":0.00027018288,"about_ca_topic_score_gemma":0.000107866734,"teacher_disagreement_score":0.36216602,"about_ca_system_score_codex":0.00013426095,"about_ca_system_score_gemma":0.00015392815,"threshold_uncertainty_score":0.753277},"labels":[],"label_agreement":null},{"id":"W4402266206","doi":"10.1371/journal.ppat.1012478","title":"New approaches to tackle a rising problem: Large-scale methods to study antifungal resistance","year":2024,"lang":"en","type":"review","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of Allergy and Infectious Diseases; Fonds de Recherche du Québec - Santé; National Institutes of Health; Canada Research Chairs","keywords":"Antifungal; Resistance (ecology); Scale (ratio); Computational biology; Computer science; Biology; Microbiology; Geography; Ecology; Cartography","score_opus":0.20880059187725175,"score_gpt":0.40765026469713966,"score_spread":0.1988496728198879,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402266206","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00034180272,0.9727406,0.013063871,0.00028979164,0.0002952365,0.008312924,0.00042810832,0.00034010567,0.0041875774],"genre_scores_gemma":[0.00013901733,0.5370547,0.42834908,0.00022306178,0.0010185634,0.0007827663,0.00013723901,0.00039824948,0.0318973],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9935278,0.00081049977,0.001433641,0.0022279636,0.0009252966,0.0010747793],"domain_scores_gemma":[0.99645233,0.00024398715,0.000239914,0.0018975683,0.0001231495,0.0010430616],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0022412352,0.0010304366,0.003840927,0.0005244515,0.0002351982,0.00016925517,0.00051592937,0.00045530664,0.00020409268],"category_scores_gemma":[0.00052158453,0.00078226253,0.0010472573,0.002135225,0.000037292637,0.00008122384,0.00049845956,0.0011361627,0.0010919903],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036172874,0.003034675,0.0011434802,0.07641177,0.0022851403,0.0011048464,0.007139637,7.842117e-7,0.00033625797,0.00024751647,0.021558683,0.8863755],"study_design_scores_gemma":[0.00042373294,0.0005845334,0.0002569318,0.023599286,0.0100082755,0.000026746211,0.0009016624,0.0000071741624,0.00005920123,0.00014722953,0.96299213,0.0009931034],"about_ca_topic_score_codex":0.000012159262,"about_ca_topic_score_gemma":0.00027889904,"teacher_disagreement_score":0.9414334,"about_ca_system_score_codex":0.00043640714,"about_ca_system_score_gemma":0.0010228602,"threshold_uncertainty_score":0.99968576},"labels":[],"label_agreement":null},{"id":"W4402485864","doi":"10.1128/aac.00570-24","title":"Recent increase in <i>Candida auris</i> frequency in the SENTRY surveillance program: antifungal activity and genotypic characterization","year":2024,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Genentech; U.S. Food and Drug Administration; National Institutes of Health; Astellas Pharma; Basilea Pharmaceutica; Ohio State University; Nabriva Therapeutics; Pfizer; Melinta Therapeutics; Entasis Therapeutics; Wockhardt; Mundipharma International; Zoetis; Menarini Group; McGill University; Roche; Cidara Therapeutics; Medpace; Carnegie Mellon University; TenNor Therapeutics; Harvard University; Meiji Seika Pharma; Shionogi; National Cancer Institute; Gilead Sciences; GlaxoSmithKline; Dr. Falk Pharma","keywords":"Candida auris; Anidulafungin; Fluconazole; Amphotericin B; Micafungin; Caspofungin; Microbiology; Biology; Clade; Genotype; Antifungal; Genetics; Phylogenetic tree","score_opus":0.011506066302372853,"score_gpt":0.2787268001910243,"score_spread":0.2672207338886515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402485864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936137,0.00035824103,0.00002599687,0.004961829,0.00008815031,0.00067918765,0.00003182384,0.00003928362,0.00020179595],"genre_scores_gemma":[0.982076,0.014682188,0.000057580746,0.0028888225,0.000087807464,0.000013382901,0.00007188081,0.00001770195,0.00010467082],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989389,0.00009655282,0.00021029926,0.00037589297,0.000129678,0.00024864846],"domain_scores_gemma":[0.99967366,0.0000367918,0.000037383787,0.00017267402,0.000024880943,0.00005459972],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035689058,0.00016726313,0.00025025307,0.00007423117,0.00006244693,0.000100995196,0.000058440753,0.000098943936,0.00006399253],"category_scores_gemma":[0.000016001972,0.00011829108,0.00003931506,0.00032746512,0.00010309981,0.00013002449,0.000017468248,0.0002378442,0.0000030799679],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034517352,0.0003671958,0.7829699,0.00022514272,0.000023967992,0.00010281963,0.00063356536,6.832476e-8,0.093281,0.000017660335,0.0006476909,0.12138584],"study_design_scores_gemma":[0.00096110965,0.00008194901,0.9844021,0.00017312092,0.000010440349,0.000030805004,0.0000363071,0.00018496293,0.001573977,0.000026945112,0.012390394,0.00012784461],"about_ca_topic_score_codex":0.00026855763,"about_ca_topic_score_gemma":0.000354023,"teacher_disagreement_score":0.20143227,"about_ca_system_score_codex":0.000044602955,"about_ca_system_score_gemma":0.00007299458,"threshold_uncertainty_score":0.48237702},"labels":[],"label_agreement":null},{"id":"W4402540429","doi":"10.1007/978-3-319-20788-9_41-1","title":"Dealing with Fungal Infections After Lung Transplantation","year":2024,"lang":"en","type":"book-chapter","venue":"Organ and tissue transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"","keywords":"Lung transplantation; Medicine; Transplantation; Intensive care medicine; Internal medicine","score_opus":0.0075739336432221116,"score_gpt":0.2468509873491654,"score_spread":0.2392770537059433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402540429","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26487282,0.011656486,0.015417015,0.0010275098,0.00063390966,0.002678637,0.0013214657,0.00071933016,0.70167285],"genre_scores_gemma":[0.85602343,0.008789971,0.00022846796,0.00007691558,0.00017991535,0.000016480924,0.0006438674,0.000085318425,0.13395566],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.9988058,0.000008165511,0.00028675434,0.00045070893,0.0002728802,0.00017566947],"domain_scores_gemma":[0.99952644,0.000043911456,0.000058962734,0.00016024002,0.000080419675,0.00013004983],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00008109126,0.00031784642,0.0003443526,0.00019124447,0.000101662765,0.00004885813,0.000027046717,0.00027789827,0.0007418263],"category_scores_gemma":[0.0000015534088,0.0002665765,0.00007059576,0.00005424561,0.00010430121,0.00011896643,0.0000027823114,0.0003996511,0.00011133922],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03310399,0.0006735839,0.15420154,0.14037624,0.0051242514,0.04172584,0.034084618,0.00006297299,0.0332534,0.49127188,0.0008029222,0.065318786],"study_design_scores_gemma":[0.02541976,0.010859932,0.578025,0.07063598,0.07509795,0.029198118,0.000883672,0.00057815615,0.04430424,0.029135967,0.12602091,0.009840331],"about_ca_topic_score_codex":0.00003318138,"about_ca_topic_score_gemma":0.0008215388,"teacher_disagreement_score":0.5911506,"about_ca_system_score_codex":0.00005487097,"about_ca_system_score_gemma":0.000074467134,"threshold_uncertainty_score":0.99997866},"labels":[],"label_agreement":null},{"id":"W4402650936","doi":"10.1177/10781552241284528","title":"Evaluation of voriconazole therapeutic drug monitoring in malignant hematology patients","year":2024,"lang":"en","type":"article","venue":"Journal of Oncology Pharmacy Practice","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Voriconazole; Medicine; Therapeutic drug monitoring; Internal medicine; Neutropenia; Adverse effect; Clinical endpoint; Chemotherapy; Clinical trial; Pharmacokinetics; Dermatology","score_opus":0.09446946036107214,"score_gpt":0.47140486505762913,"score_spread":0.376935404696557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402650936","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97957456,0.012487141,0.000057302328,0.0032595452,0.0014440956,0.0002515749,0.0000010415862,0.0000066455395,0.0029180814],"genre_scores_gemma":[0.99776804,0.001263489,0.0004883047,0.00020748058,0.0002002775,0.000005181386,8.3943956e-7,0.000011376783,0.000054991946],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99728644,0.0008600822,0.0007786892,0.00014377927,0.00076346786,0.00016754273],"domain_scores_gemma":[0.9967182,0.00115462,0.0005054261,0.000111309506,0.0014305593,0.00007987227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006616027,0.000099251716,0.0004130494,0.00023448744,0.00002302725,0.000008910548,0.000089942,0.00006297822,0.00012937633],"category_scores_gemma":[0.001769942,0.00007656087,0.00011522737,0.0002632838,0.000059082762,0.00053577044,0.0000215711,0.0006196508,0.000014115001],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034418586,0.0024454608,0.7815202,0.0002552429,0.0006148919,0.00067912997,0.001967737,0.000054573124,0.018008262,0.00019893378,0.0008698703,0.18994385],"study_design_scores_gemma":[0.025119886,0.0027956867,0.80101156,0.0014875518,0.0082139,0.002515628,0.005406085,0.005002224,0.06535111,0.0015740119,0.08117909,0.0003432389],"about_ca_topic_score_codex":0.000022927234,"about_ca_topic_score_gemma":0.00000587878,"teacher_disagreement_score":0.18960062,"about_ca_system_score_codex":0.00058194256,"about_ca_system_score_gemma":0.0014499581,"threshold_uncertainty_score":0.31220618},"labels":[],"label_agreement":null},{"id":"W4402783436","doi":"10.1093/ofid/ofae537","title":"Exhaled Breath Condensate Surveillance for <i>Aspergillus</i> in Acute Leukemia—a Pilot Trial","year":2024,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"","keywords":"Medicine; Exhaled breath condensate; Acute leukemia; Intensive care medicine; Pathogenic organism; Aspergillus; Internal medicine; Leukemia; Microbiology; Asthma","score_opus":0.02098799530065429,"score_gpt":0.32661081097382066,"score_spread":0.3056228156731664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402783436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9768186,0.0016893683,0.00020558077,0.00074005825,0.00067222683,0.003895521,0.0005507797,0.0002484595,0.0151794],"genre_scores_gemma":[0.9930399,0.00028294497,0.000030230198,0.0009054474,0.00016346642,0.000488707,0.00022461786,0.00005342402,0.004811275],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981329,0.000072397816,0.00042842893,0.0006382542,0.00022894447,0.00049911486],"domain_scores_gemma":[0.9988644,0.00030965952,0.000060671948,0.00043853236,0.00010619631,0.00022050038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003421955,0.00026357578,0.0006185554,0.0001180743,0.00015499203,0.00025127447,0.0002005113,0.00008933861,0.00028556894],"category_scores_gemma":[0.0002696735,0.00021901402,0.00026160924,0.0003516845,0.0001146631,0.0003196385,0.00013065721,0.00018553284,0.00009125283],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.10780038,0.0016635375,0.82219744,0.00083729194,0.0007318635,0.0007282865,0.00009189183,0.000033960663,0.0017380529,0.007515741,0.047877684,0.008783878],"study_design_scores_gemma":[0.2658679,0.018575223,0.5994481,0.0018596655,0.0015404036,0.0002995816,0.00049317087,0.003696992,0.0013686003,0.023124384,0.08143106,0.002294914],"about_ca_topic_score_codex":0.000451492,"about_ca_topic_score_gemma":0.0015154488,"teacher_disagreement_score":0.22274932,"about_ca_system_score_codex":0.00045499936,"about_ca_system_score_gemma":0.0007647649,"threshold_uncertainty_score":0.89311326},"labels":[],"label_agreement":null},{"id":"W4402863949","doi":"10.1128/aac.01194-24","title":"Naamidine A reveals a promising zinc-binding strategy for topical antifungal therapy","year":2024,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Cancer Moonshot; Moonshot Research and Development Program; National Institute of Allergy and Infectious Diseases; U.S. Department of Health and Human Services; National Institutes of Health; National Cancer Institute; Canadian Institutes of Health Research; Canadian Institute for Advanced Research","keywords":"Dermatomycosis; Terbinafine; Trichophyton; Antifungal; In vivo; In vitro; Pharmacology; Biology; Microbiology; Antifungal drugs; Medicine; Itraconazole; Biochemistry; Biotechnology","score_opus":0.04695992066152658,"score_gpt":0.3348623236366185,"score_spread":0.2879024029750919,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402863949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99354374,0.00049360894,0.0006562592,0.0035805106,0.00019693571,0.0008497631,0.00003829139,0.00011264867,0.0005282218],"genre_scores_gemma":[0.9891998,0.002050382,0.00080197875,0.003170609,0.00040897756,0.000014326463,0.00004543348,0.00004732888,0.004261122],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986575,0.000022849885,0.00030622602,0.00050645636,0.00014164252,0.00036531477],"domain_scores_gemma":[0.99952793,0.00005709307,0.00004074747,0.0001954462,0.00006294248,0.000115858566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024910716,0.00023117787,0.00038777976,0.000073385396,0.00016197521,0.00016456573,0.00007240798,0.00014879098,0.00024138053],"category_scores_gemma":[0.000017210969,0.00017665344,0.00020150037,0.00015314725,0.000104153354,0.00012457458,0.000015914351,0.0001740487,0.00001093021],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002222353,0.0005076497,0.074729264,0.0012911211,0.00048293182,0.00011188179,0.0007816888,7.300798e-7,0.72142327,0.001084917,0.0695414,0.1278228],"study_design_scores_gemma":[0.015628105,0.0033930102,0.38353214,0.0033813505,0.00032657234,0.00041770894,0.0004270426,0.0021901089,0.19763492,0.0019515035,0.389413,0.0017045665],"about_ca_topic_score_codex":0.000014050025,"about_ca_topic_score_gemma":0.0000036168497,"teacher_disagreement_score":0.52378833,"about_ca_system_score_codex":0.000044583154,"about_ca_system_score_gemma":0.0000927668,"threshold_uncertainty_score":0.72037184},"labels":[],"label_agreement":null},{"id":"W4402898830","doi":"10.3390/hygiene4030030","title":"Global Health Alert: Racing to Control Antimicrobial-Resistant Candida auris and Healthcare Waste Disinfection Using UVC LED Technology","year":2024,"lang":"en","type":"article","venue":"Hygiene","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Candida auris; Infection control; Antimicrobial; Health care; Medicine; Microbiology; Antifungal; Biology; Intensive care medicine","score_opus":0.01191015789534881,"score_gpt":0.3235608029827072,"score_spread":0.31165064508735835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402898830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9692254,0.0042839036,0.00844757,0.016546883,0.0003998272,0.00067142944,0.0001127112,0.00021658174,0.00009570113],"genre_scores_gemma":[0.9976146,0.00018447425,0.0006457129,0.0012228993,0.00015771376,0.00000777963,0.000014092156,0.000022715994,0.00012999249],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99829,0.00006485071,0.00039727648,0.0005625921,0.00018844189,0.0004968609],"domain_scores_gemma":[0.9991878,0.000040071565,0.00006355405,0.0003263024,0.000115277544,0.00026699275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003755718,0.00020108806,0.0005031063,0.00020986237,0.0002399816,0.0000581214,0.00005205693,0.00014059871,0.0000152578],"category_scores_gemma":[0.00013436312,0.00017533702,0.000081103884,0.00079180213,0.00009816879,0.000088766545,0.000048011996,0.00019606177,0.000012219896],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037265948,0.00037275886,0.39544618,0.005730186,0.00043746328,0.0007536215,0.0014864568,0.00037920446,0.43134436,0.0038516165,0.0056829974,0.15078856],"study_design_scores_gemma":[0.023072237,0.010549306,0.77932686,0.02730232,0.0016269685,0.0031585854,0.008326209,0.03928231,0.06778217,0.0036133286,0.03210146,0.0038582664],"about_ca_topic_score_codex":0.0024012933,"about_ca_topic_score_gemma":0.0038886957,"teacher_disagreement_score":0.38388065,"about_ca_system_score_codex":0.0007902853,"about_ca_system_score_gemma":0.0005737409,"threshold_uncertainty_score":0.7150036},"labels":[],"label_agreement":null},{"id":"W4403171180","doi":"10.1503/cmaj.240881","title":"Cutaneous mucormycosis shortly after renal transplantation","year":2024,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Mucormycosis; Transplantation; Medicine; Kidney transplantation; Computer science; World Wide Web; Data science; Surgery","score_opus":0.005559964780857234,"score_gpt":0.2431854814695937,"score_spread":0.23762551668873647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403171180","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9577375,0.0015733285,0.0007770521,0.028375246,0.0011584753,0.00015514423,0.0000771738,0.00006678904,0.010079307],"genre_scores_gemma":[0.9899765,0.00077929,0.00008761634,0.0054405057,0.0013544053,0.000005826234,0.000022740687,0.000016346818,0.0023167538],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977981,0.000071066475,0.0003640447,0.00015547553,0.0012226384,0.0003886711],"domain_scores_gemma":[0.99815583,0.00012497227,0.000039854654,0.000081011254,0.00021031876,0.0013880333],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00081456336,0.00010833674,0.00018890882,0.00018156266,0.00012379116,0.00011520361,0.00007061136,0.00032595053,0.010002103],"category_scores_gemma":[0.0004750585,0.00009010419,0.00017050575,0.00023263883,0.00003303339,0.00012667465,0.0000028813445,0.0009284712,0.00038384667],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038850916,0.00008299243,0.55547625,0.0003060451,0.0005771641,0.054324213,0.0021275443,0.0000025662282,0.00043382557,0.00042827532,0.18354662,0.20230599],"study_design_scores_gemma":[0.0009824502,0.00027173845,0.32182676,0.0011706243,0.00041746633,0.015088726,0.00047786417,0.0010090766,0.00016036206,0.0004714551,0.65776503,0.00035846754],"about_ca_topic_score_codex":0.0006118582,"about_ca_topic_score_gemma":0.026946263,"teacher_disagreement_score":0.4742184,"about_ca_system_score_codex":0.001106213,"about_ca_system_score_gemma":0.0031623745,"threshold_uncertainty_score":0.9909029},"labels":[],"label_agreement":null},{"id":"W4403228874","doi":"10.1038/s41564-024-01819-2","title":"Most azole resistance mutations in the Candida albicans drug target confer cross-resistance without intrinsic fitness cost","year":2024,"lang":"en","type":"article","venue":"Nature Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Sciences and Engineering Research Council of Canada; Université Laval; University of Guelph; PROTEO","funders":"Fonds de recherche du Québec – Nature et technologies; Canadian Institutes of Health Research; Government of Canada; Genome Canada","keywords":"Candida albicans; Drug resistance; Cross-resistance; Azole; Resistance (ecology); Biology; Drug; Microbiology; Genetics; Antifungal; Pharmacology; Ecology","score_opus":0.007933726152405295,"score_gpt":0.3062406543378371,"score_spread":0.2983069281854318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403228874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94429106,0.026062712,0.00025640827,0.013332778,0.0010445769,0.0014419932,0.0008829966,0.00015324084,0.012534246],"genre_scores_gemma":[0.9749385,0.00010456936,0.00034133167,0.0034725827,0.00020532515,0.000079035395,0.0006265488,0.00003131309,0.020200761],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979888,0.0002110787,0.00044554987,0.0006799704,0.000146768,0.0005278211],"domain_scores_gemma":[0.998578,0.00043248347,0.000072631774,0.00057291123,0.00026307316,0.0000809023],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062770676,0.00028521422,0.0004853851,0.0001485194,0.00019143854,0.0000883404,0.0003232145,0.00047336015,0.00032252457],"category_scores_gemma":[0.00035706066,0.00019332755,0.000117162934,0.0008163715,0.00069705537,0.00010542042,0.000044088913,0.0016749308,0.000076864235],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004020531,0.0006989295,0.4421008,0.0020742787,0.00044308425,0.0019001834,0.007920782,0.00003445845,0.15979774,0.038670853,0.34102213,0.0013162374],"study_design_scores_gemma":[0.0016065416,0.000045581426,0.16618925,0.0004937937,0.00009549667,0.000102459424,0.0007306637,0.000020214842,0.0047000195,0.001163946,0.82446575,0.0003862483],"about_ca_topic_score_codex":0.00008696717,"about_ca_topic_score_gemma":0.017411515,"teacher_disagreement_score":0.48344365,"about_ca_system_score_codex":0.00023698549,"about_ca_system_score_gemma":0.0005825232,"threshold_uncertainty_score":0.9716034},"labels":[],"label_agreement":null},{"id":"W4403317750","doi":"10.1186/s12879-024-10062-3","title":"The first prevalence and antifungal susceptibility profile of Candida infections in Palestine, 2022","year":2024,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"Fonds de Recherche du Québec - Santé","keywords":"Fluconazole; Micafungin; Flucytosine; Candida parapsilosis; Candida glabrata; Caspofungin; Amphotericin B; Microbiology; Candida tropicalis; Candida krusei; Fungemia; Medicine; Voriconazole; Candida albicans; Candida dubliniensis; Internal medicine; Biology; Corpus albicans; Antifungal","score_opus":0.009463223787939868,"score_gpt":0.27203246222676647,"score_spread":0.2625692384388266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403317750","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98967695,0.0077860984,0.000053906293,0.000084072846,0.00028479716,0.0006796765,0.000121232544,0.00012621797,0.0011870658],"genre_scores_gemma":[0.9981886,0.0009660199,0.000011279316,0.000021630512,0.000088780056,0.000089739464,0.000015088458,0.0000149431835,0.0006039147],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99876356,0.00006257254,0.0003333248,0.00037983782,0.00021856553,0.00024213841],"domain_scores_gemma":[0.99870896,0.0006635887,0.000051517633,0.00036324206,0.00010242074,0.00011024668],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033247718,0.00015241325,0.00023707148,0.000102430364,0.00020770809,0.00005069256,0.000055707984,0.000063285646,0.00015789577],"category_scores_gemma":[0.0010328317,0.00010693412,0.00012472525,0.00046720327,0.00038774995,0.00012006655,0.000051701674,0.0002053466,0.00001226801],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014248543,0.00030228723,0.9942102,0.002560657,0.000025168289,0.000013732291,0.00006846311,0.00000568543,0.00020703881,0.00040446658,0.00072173425,0.0013381089],"study_design_scores_gemma":[0.00045423178,0.00027366995,0.9969521,0.0003933477,0.00012055991,0.00002806936,0.00006212275,0.0005412974,0.000086141146,0.00035140436,0.0006314252,0.000105642896],"about_ca_topic_score_codex":0.00033700294,"about_ca_topic_score_gemma":0.012357934,"teacher_disagreement_score":0.012020932,"about_ca_system_score_codex":0.00010825445,"about_ca_system_score_gemma":0.0003992319,"threshold_uncertainty_score":0.6896017},"labels":[],"label_agreement":null},{"id":"W4403543858","doi":"10.1007/s00404-024-07771-0","title":"Aspergillus-superinfected pulmonary metastases following treatment of recurrent endometrial cancer with immune checkpoint inhibitor","year":2024,"lang":"en","type":"article","venue":"Archives of Gynecology and Obstetrics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; McGill University Health Centre","funders":"Hebrew University of Jerusalem","keywords":"Medicine; Endometrial cancer; Oncology; Internal medicine; Aspergillus; Immune system; Cancer research; Cancer; Immunology; Microbiology","score_opus":0.01850860158029294,"score_gpt":0.2856436364748277,"score_spread":0.2671350348945348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403543858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9291241,0.06887119,0.00007634083,0.00009642516,0.00060548226,0.0003826872,0.00007285992,0.000027437522,0.0007434467],"genre_scores_gemma":[0.9900879,0.0088623185,0.00066684745,0.000006893041,0.000051829586,0.000029371864,0.00003590955,0.00001522483,0.0002436879],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99881005,0.00007914952,0.0004228171,0.00031208334,0.00015937521,0.00021652311],"domain_scores_gemma":[0.99590826,0.0036799768,0.00008223754,0.00020140664,0.000037958456,0.00009018523],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010667888,0.00017837695,0.00063815556,0.00038879347,0.000054726723,0.000006231546,0.000047035224,0.00007063929,0.000065771885],"category_scores_gemma":[0.0010073635,0.00011907752,0.00026666975,0.0005420294,0.00029471662,0.000059950875,0.000038134065,0.00012423645,0.0000011725512],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033092005,0.0017091561,0.3631437,0.0013800864,0.0019122042,0.00084318034,0.0017111477,0.000011173459,0.11329074,0.00052135164,0.0000094422785,0.51215863],"study_design_scores_gemma":[0.0073564313,0.013069064,0.83040625,0.000967219,0.0019772802,0.00006384717,0.0009339885,0.0007151911,0.13618313,0.0003317848,0.007596976,0.00039882577],"about_ca_topic_score_codex":0.000072216346,"about_ca_topic_score_gemma":0.000053104184,"teacher_disagreement_score":0.5117598,"about_ca_system_score_codex":0.00006029984,"about_ca_system_score_gemma":0.00022561682,"threshold_uncertainty_score":0.48558405},"labels":[],"label_agreement":null},{"id":"W4403566334","doi":"10.1016/j.cjca.2024.10.013","title":"First Evidence of a HeartMate 3 Driveline Infection by Rhizopus Arrhizus: A Case Report","year":2024,"lang":"en","type":"article","venue":"Canadian Journal of Cardiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Rhizopus arrhizus; Medicine; Dermatology; Nuclear magnetic resonance","score_opus":0.025014654217992892,"score_gpt":0.3032273839110357,"score_spread":0.27821272969304284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403566334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9791162,0.010861131,0.005658776,0.0023977768,0.0009654743,0.00013311542,0.000028874214,0.000010166837,0.00082850404],"genre_scores_gemma":[0.9984694,0.00045430887,0.00012349972,0.00007599045,0.00055637426,0.0000016661867,0.000003858278,0.000011361371,0.0003035466],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99885356,0.0000805415,0.00056109193,0.0001607439,0.00012198327,0.0002220596],"domain_scores_gemma":[0.99868464,0.00016037028,0.00013514326,0.00021366749,0.0003779752,0.00042821356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008680752,0.00009921,0.00050644454,0.00022755814,0.000057691646,0.000013461006,0.000044220167,0.000121014076,0.00005791071],"category_scores_gemma":[0.001241991,0.000081368125,0.00027253988,0.00020431813,0.00017282381,0.000110574205,0.0000057823017,0.00031839995,0.0000090493795],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039964358,0.000007249182,0.44859964,0.00096634455,0.00061123574,0.40234706,0.00041848316,0.00032845503,0.0048483284,0.00012233762,0.13768527,0.0036659427],"study_design_scores_gemma":[0.0005815219,0.0014604166,0.0709518,0.0023258678,0.0005582692,0.7069581,0.0001958057,0.00016094239,0.0010300449,0.00031099113,0.21526158,0.00020466054],"about_ca_topic_score_codex":0.004932134,"about_ca_topic_score_gemma":0.01035531,"teacher_disagreement_score":0.37764785,"about_ca_system_score_codex":0.00021768126,"about_ca_system_score_gemma":0.0017216693,"threshold_uncertainty_score":0.7455944},"labels":[],"label_agreement":null},{"id":"W4403889545","doi":"10.1093/mmy/myae105","title":"Geraniol inhibits both planktonic cells and biofilms of the <i>Candida parapsilosis</i> species complex: Highlight for the improved efficacy of amphotericin B, caspofungin and fluconazole plus Geraniol","year":2024,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Transport Canada","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Geraniol; Candida parapsilosis; Microbiology; Fluconazole; Broth microdilution; Biology; Amphotericin B; Caspofungin; Ketoconazole; Minimum inhibitory concentration; Pharmacology; Antimicrobial; Chemistry; Botany; Antifungal; Essential oil","score_opus":0.01638267557501571,"score_gpt":0.2699281423496724,"score_spread":0.25354546677465667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403889545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893918,0.0038161208,0.0002949529,0.0044658766,0.00043900992,0.0011339455,0.00024137275,0.00002634199,0.00019056245],"genre_scores_gemma":[0.99721986,0.001130574,0.000114189104,0.0009920063,0.00014571176,0.000035226916,0.000017340113,0.000018148314,0.0003269541],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99838907,0.00010405373,0.0005117146,0.0003635422,0.0003055798,0.00032604494],"domain_scores_gemma":[0.9972651,0.002106235,0.00010226406,0.00031797643,0.0000597393,0.00014867814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059530605,0.00019462488,0.0006340972,0.000060237548,0.00011108375,0.000013432327,0.00017235808,0.00021674001,0.00037573875],"category_scores_gemma":[0.00031327855,0.00010022962,0.00014786486,0.00020124254,0.00110851,0.00002629499,0.00011481457,0.0003072079,0.000001547025],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016790495,0.00019105202,0.006294607,0.0012848206,0.00028498695,0.000029475157,0.0010075567,0.0000013384272,0.97424823,0.0020739655,0.00805107,0.004853858],"study_design_scores_gemma":[0.008338819,0.001832607,0.72028935,0.00075137813,0.000742871,0.00019338062,0.00053727755,0.00707793,0.20732096,0.00023851322,0.05232979,0.00034711926],"about_ca_topic_score_codex":0.0001527139,"about_ca_topic_score_gemma":0.00016647115,"teacher_disagreement_score":0.76692724,"about_ca_system_score_codex":0.00004490849,"about_ca_system_score_gemma":0.00035648915,"threshold_uncertainty_score":0.4114076},"labels":[],"label_agreement":null},{"id":"W4403987649","doi":"10.1007/978-3-030-36123-5_41","title":"Dealing with Fungal Infections After Lung Transplantation","year":2024,"lang":"en","type":"book-chapter","venue":"Organ and tissue transplantation","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"","keywords":"Lung transplantation; Medicine; Lung; Intensive care medicine; Transplantation; Internal medicine","score_opus":0.0075739336432221116,"score_gpt":0.2468509873491654,"score_spread":0.2392770537059433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403987649","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26487282,0.011656486,0.015417015,0.0010275098,0.00063390966,0.002678637,0.0013214657,0.00071933016,0.70167285],"genre_scores_gemma":[0.85602343,0.008789971,0.00022846796,0.00007691558,0.00017991535,0.000016480924,0.0006438674,0.000085318425,0.13395566],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.9988058,0.000008165511,0.00028675434,0.00045070893,0.0002728802,0.00017566947],"domain_scores_gemma":[0.99952644,0.000043911456,0.000058962734,0.00016024002,0.000080419675,0.00013004983],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00008109126,0.00031784642,0.0003443526,0.00019124447,0.000101662765,0.00004885813,0.000027046717,0.00027789827,0.0007418263],"category_scores_gemma":[0.0000015534088,0.0002665765,0.00007059576,0.00005424561,0.00010430121,0.00011896643,0.0000027823114,0.0003996511,0.00011133922],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03310399,0.0006735839,0.15420154,0.14037624,0.0051242514,0.04172584,0.034084618,0.00006297299,0.0332534,0.49127188,0.0008029222,0.065318786],"study_design_scores_gemma":[0.02541976,0.010859932,0.578025,0.07063598,0.07509795,0.029198118,0.000883672,0.00057815615,0.04430424,0.029135967,0.12602091,0.009840331],"about_ca_topic_score_codex":0.00003318138,"about_ca_topic_score_gemma":0.0008215388,"teacher_disagreement_score":0.5911506,"about_ca_system_score_codex":0.00005487097,"about_ca_system_score_gemma":0.000074467134,"threshold_uncertainty_score":0.99997866},"labels":[],"label_agreement":null},{"id":"W4404021220","doi":"10.1128/jcm.00950-24","title":"Serum antigen tests for the diagnosis of invasive aspergillosis: a retrospective comparison of five <i>Aspergillus</i> antigen assays and one beta-D-glucan assay","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Aspergillosis; Immunoassay; Antigen; Medicine; Immunology; Aspergillus; Hematopoietic stem cell transplantation; Transplantation; Internal medicine; Biology; Microbiology; Antibody","score_opus":0.08650446087947392,"score_gpt":0.4120616058397315,"score_spread":0.32555714496025756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404021220","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97967696,0.013907304,0.0002796451,0.00451416,0.00062006305,0.0005301595,0.00033032917,0.000009404223,0.00013197899],"genre_scores_gemma":[0.9901858,0.0077822735,0.0011774722,0.00035029015,0.00037087174,0.0000069225266,0.0000112277,0.000022577156,0.00009255541],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9965764,0.0003870755,0.002220508,0.0003655884,0.00016241975,0.00028795013],"domain_scores_gemma":[0.98973805,0.007750845,0.0010934958,0.00032138213,0.0009483307,0.00014791566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003424881,0.00021386675,0.0019092249,0.0001297105,0.00007682245,0.000014486201,0.000250743,0.0003678062,0.00008498575],"category_scores_gemma":[0.00501087,0.00013078081,0.00078605866,0.00025115247,0.0009155881,0.00009053696,0.00009794131,0.0007593373,0.0000030634008],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011244566,0.00065343216,0.92558134,0.00030675338,0.0016418068,0.00001722724,0.00043539618,0.0000038277312,0.059867375,0.00028336214,0.005699239,0.004385775],"study_design_scores_gemma":[0.0017561555,0.004265804,0.9522875,0.0010302624,0.000871496,0.0000731539,0.0006450687,0.000059332324,0.034670606,0.00051525893,0.0036852288,0.00014014126],"about_ca_topic_score_codex":0.00003373801,"about_ca_topic_score_gemma":0.0002805671,"teacher_disagreement_score":0.02670614,"about_ca_system_score_codex":0.000060950966,"about_ca_system_score_gemma":0.00056685845,"threshold_uncertainty_score":0.59988415},"labels":[],"label_agreement":null},{"id":"W4404135831","doi":"10.1016/j.cmicom.2024.105050","title":"Communicable Episode 08: The Nightmare Series, part 1 - how to deal with Candida auris","year":2024,"lang":"en","type":"article","venue":"CMI Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Nightmare; Candida auris; Series (stratigraphy); Microbiology; Medicine; Biology; Psychiatry; Antifungal","score_opus":0.03720158057900449,"score_gpt":0.30171784452944506,"score_spread":0.2645162639504406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404135831","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16228907,0.03378854,0.0020632201,0.6654204,0.00018798235,0.0026076906,0.0003526441,0.00085371366,0.13243674],"genre_scores_gemma":[0.9692245,0.001287415,0.0060331253,0.0011942425,0.000060622002,0.00017274574,0.00019427632,0.000031306616,0.02180175],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99891967,0.00019699002,0.00019084045,0.00021156592,0.00021404703,0.00026686338],"domain_scores_gemma":[0.99549025,0.00036717582,0.000032649845,0.0037713237,0.0001795964,0.00015900518],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003939665,0.00015072148,0.00024189915,0.000051279963,0.00069046445,0.00013123204,0.00087663316,0.00006448353,0.00019762103],"category_scores_gemma":[0.000069271526,0.00009171961,0.000074628675,0.0006181016,0.0004211363,0.0001389372,0.00038438416,0.0005381381,0.00015699808],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067951024,0.0006575223,0.10393301,0.00042154003,0.0008309518,0.00006601268,0.01160157,0.000021911443,0.0012669774,0.0683562,0.7799411,0.0322237],"study_design_scores_gemma":[0.00018050404,0.00015901936,0.012289865,0.00028448968,0.00011226943,0.000034884895,0.002016002,0.00016874002,0.00014498479,0.00027631896,0.98420227,0.00013067733],"about_ca_topic_score_codex":0.0005114401,"about_ca_topic_score_gemma":0.016125325,"teacher_disagreement_score":0.8069354,"about_ca_system_score_codex":0.00013401211,"about_ca_system_score_gemma":0.0003065469,"threshold_uncertainty_score":0.89983106},"labels":[],"label_agreement":null},{"id":"W4404148966","doi":"10.1038/s44259-024-00055-2","title":"A one health roadmap towards understanding and mitigating emerging Fungal Antimicrobial Resistance: fAMR","year":2024,"lang":"en","type":"review","venue":"npj Antimicrobials and Resistance","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Environment Research Council; Biotechnology and Biological Sciences Research Council; Medical Research Council; Directorate for Biological Sciences; Wellcome; Imperial College London; Research Councils UK; Medical Research Council Centre for Medical Mycology; Leverhulme Trust; Cystic Fibrosis Trust; Department of Health and Social Care; National Institute for Health and Care Research; Sight Research UK; Wellcome Trust; Canadian Institute for Advanced Research","keywords":"Antibiotic resistance; Antimicrobial; Resistance (ecology); Biology; Microbiology; Ecology; Antibiotics","score_opus":0.08743561233188347,"score_gpt":0.36295426508413325,"score_spread":0.2755186527522498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404148966","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00060537923,0.9897587,0.00032063675,0.0028271899,0.0005466784,0.0018961246,0.00057323294,0.00026157507,0.0032105218],"genre_scores_gemma":[0.0059022843,0.980398,0.0040802825,0.00065371394,0.0006140919,0.00003400408,0.00019001878,0.0002449544,0.007882673],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99342114,0.00039416552,0.0020932888,0.0021295517,0.0006284822,0.0013333516],"domain_scores_gemma":[0.9973056,0.00020447184,0.000872123,0.0008613458,0.0001546339,0.00060187746],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001622492,0.0012327336,0.0047916085,0.0005103614,0.0009384472,0.00045829764,0.00027957195,0.0007796982,0.00004471677],"category_scores_gemma":[0.00021791538,0.0010713218,0.00083313277,0.000911782,0.0007936599,0.00022876226,0.00031853103,0.0015818351,0.000027413947],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070728734,0.0004516788,0.00016901955,0.68729496,0.0022306854,0.0008485936,0.001645775,1.8850444e-7,0.001477429,0.009495033,0.07839816,0.2172812],"study_design_scores_gemma":[0.0013448723,0.00016478334,0.00023670112,0.26661828,0.003586744,0.00027828934,0.00053454784,0.000004414273,0.00008109235,0.00072777254,0.72460824,0.001814247],"about_ca_topic_score_codex":0.00005813755,"about_ca_topic_score_gemma":0.0006323169,"teacher_disagreement_score":0.64621013,"about_ca_system_score_codex":0.0008788358,"about_ca_system_score_gemma":0.0016174188,"threshold_uncertainty_score":0.9991737},"labels":[],"label_agreement":null},{"id":"W4404188426","doi":"10.1093/jpids/piae116","title":"Transition to Enteral Triazole Antifungal Therapy for Pediatric Invasive Candidiasis: Secondary Analysis of a Multicenter Cohort Study Conducted by the Pediatric Fungal Network","year":2024,"lang":"en","type":"article","venue":"Journal of the Pediatric Infectious Diseases Society","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Janssen Biotech; National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention; SymBio Pharmaceuticals Limited; Astellas Pharma; Pfizer; Melinta Therapeutics; Moderna; U.S. Department of Health and Human Services; Sanofi Pasteur; Seqirus; Amplyx; Gilead Sciences; Agency for Healthcare Research and Quality; Nabriva Therapeutics; National Institute of Diabetes and Digestive and Kidney Diseases; Sanofi; Allergan; AstraZeneca; Cystic Fibrosis Foundation; Eli Lilly and Company; Bristol-Myers Squibb; GlaxoSmithKline; National Institutes of Health; Shionogi","keywords":"Medicine; Invasive candidiasis; Antifungal; Voriconazole; Micafungin; Echinocandins; Caspofungin; Cohort; Tertiary care; Multicenter study; Intensive care medicine; Fluconazole; Internal medicine; Randomized controlled trial; Dermatology","score_opus":0.009569440582501454,"score_gpt":0.2775622645765839,"score_spread":0.2679928239940824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404188426","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98427564,0.010274414,0.0005372806,0.00032746026,0.0012651765,0.002681543,0.0005790014,0.000043896023,0.00001561125],"genre_scores_gemma":[0.99168015,0.0041286414,0.000028568933,0.00063719135,0.0032867128,0.00009278425,0.000037064667,0.000041807052,0.000067111796],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99666333,0.00040470992,0.0011699935,0.00042597562,0.000871359,0.00046465787],"domain_scores_gemma":[0.9968587,0.0010637532,0.000632376,0.00043780252,0.0007298008,0.00027757548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013505436,0.00034969722,0.0009756058,0.000300251,0.00038582084,0.00012232379,0.00031545488,0.0001468189,0.00012778735],"category_scores_gemma":[0.000330131,0.0002050447,0.0027763117,0.0033655695,0.00007528532,0.00027201456,0.000057285284,0.000659856,0.0000023166585],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011862041,0.0013765089,0.95547056,0.00035436588,0.0037900312,0.000012330533,0.00216988,0.0005824194,0.000112925234,0.0000014129415,0.03480332,0.00014001263],"study_design_scores_gemma":[0.0043379515,0.0013809368,0.9571231,0.000022409688,0.034725595,0.000045133078,0.0015058129,0.0005174442,0.000020829923,0.000025896612,0.00006327561,0.00023163202],"about_ca_topic_score_codex":0.000084684085,"about_ca_topic_score_gemma":0.000059428814,"teacher_disagreement_score":0.034740042,"about_ca_system_score_codex":0.00030802458,"about_ca_system_score_gemma":0.0011382161,"threshold_uncertainty_score":0.83614796},"labels":[],"label_agreement":null},{"id":"W4404243876","doi":"10.1128/jcm.00937-24","title":"Nomenclature for human and animal fungal pathogens and diseases: a proposal for standardized terminology","year":2024,"lang":"en","type":"review","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; Toronto Public Health; Institut National de Santé Publique du Québec","funders":"National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention","keywords":"Nomenclature; Terminology; Biology; Computational biology; Taxonomy (biology); Zoology; Linguistics; Philosophy","score_opus":0.09355273731937166,"score_gpt":0.4798946280619295,"score_spread":0.38634189074255787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404243876","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00891201,0.9860575,0.00016508663,0.00047869334,0.00063724164,0.0016516717,0.0020743343,0.000012620804,0.000010827973],"genre_scores_gemma":[0.00126854,0.99210703,0.0042095506,0.00017238138,0.0016694895,0.00003582067,0.00014396914,0.000053722415,0.00033951283],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964212,0.00028776834,0.0023151494,0.00056020846,0.00005578011,0.00035985847],"domain_scores_gemma":[0.9966593,0.001457348,0.0010455268,0.00021596819,0.00033820467,0.0002836476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015840337,0.00038209252,0.004541534,0.0001703034,0.000089169014,0.00002907957,0.00014125745,0.0010836255,0.000015395113],"category_scores_gemma":[0.0016038306,0.00022374769,0.0016148823,0.00006655939,0.00064998586,0.000037610847,0.000101697115,0.0010929228,0.000001583873],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011432584,0.0007600897,0.003938674,0.090183884,0.004167903,0.00058698014,0.00007635572,2.9412623e-9,0.0020716544,0.0025529559,0.019578485,0.8646504],"study_design_scores_gemma":[0.003255622,0.008403692,0.0005418931,0.0053708204,0.009633068,0.0023876615,0.00002012667,5.0392447e-7,0.0000016877812,0.002065929,0.9680797,0.00023930514],"about_ca_topic_score_codex":2.656785e-7,"about_ca_topic_score_gemma":0.0000073163164,"teacher_disagreement_score":0.9485012,"about_ca_system_score_codex":0.000061373976,"about_ca_system_score_gemma":0.0015893425,"threshold_uncertainty_score":0.9124166},"labels":[],"label_agreement":null},{"id":"W4404345016","doi":"10.1128/aac.00484-24","title":"Safety, outcomes, and pharmacokinetics of isavuconazole as a treatment for invasive fungal diseases in pediatric patients: a non-comparative phase 2 trial","year":2024,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine; Pediatric Oncology Group","funders":"","keywords":"Medicine; Pharmacokinetics; Adverse effect; Dosing; Internal medicine; Aspergillosis; Case fatality rate; Mucormycosis; Surgery; Epidemiology; Immunology","score_opus":0.026266813666848392,"score_gpt":0.3554102880812145,"score_spread":0.3291434744143661,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404345016","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966156,0.00045499954,0.000031741263,0.000602659,0.0001385893,0.0016959863,0.00035073032,0.000014006989,0.00009570603],"genre_scores_gemma":[0.9923132,0.006109662,0.00007435453,0.0009166275,0.0001270494,0.00003085607,0.00010441308,0.000018057439,0.0003057779],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99897665,0.000020670906,0.0003717239,0.0003323701,0.00010690545,0.00019170607],"domain_scores_gemma":[0.9995331,0.00013395803,0.00006939735,0.00010488809,0.00005860955,0.00010004018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000061478546,0.00020443731,0.00052891363,0.00010471269,0.0000448216,0.000025615002,0.000037939808,0.00006073478,0.00006346604],"category_scores_gemma":[0.000019370736,0.00015027937,0.00016916366,0.00012674152,0.00008302141,0.000074189054,0.000015688605,0.00006183175,0.000002160454],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.08995385,0.0073478515,0.8635959,0.0018082232,0.0005658943,0.00004948812,0.0036838062,0.0000012218799,0.0037945097,0.000041542036,0.008892777,0.02026495],"study_design_scores_gemma":[0.29480296,0.0072699892,0.67831314,0.00042151264,0.00093644724,0.000004744208,0.00023622376,0.00024447773,0.011700592,0.00008924061,0.0055426345,0.0004380603],"about_ca_topic_score_codex":0.000037093036,"about_ca_topic_score_gemma":0.000026595253,"teacher_disagreement_score":0.20484912,"about_ca_system_score_codex":0.000052207506,"about_ca_system_score_gemma":0.00013825356,"threshold_uncertainty_score":0.61282146},"labels":[],"label_agreement":null},{"id":"W4404420763","doi":"10.1016/j.lanmic.2024.07.012","title":"Genomic reconstruction of an azole-resistant Candida parapsilosis outbreak and the creation of a multi-locus sequence typing scheme: a retrospective observational and genomic epidemiology study","year":2024,"lang":"en","type":"article","venue":"The Lancet Microbe","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Candida parapsilosis; Typing; Locus (genetics); Epidemiology; Outbreak; Genetics; Biology; Molecular epidemiology; Medicine; Virology; Gene; Candida albicans; Internal medicine; Genotype","score_opus":0.09159180753223989,"score_gpt":0.3530257215701824,"score_spread":0.2614339140379425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404420763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928635,0.005111138,0.00015857826,0.0010453301,0.000068452646,0.0006179664,0.00006794138,0.000018699111,0.000048415517],"genre_scores_gemma":[0.9974107,0.0006636323,0.0015778381,0.00014843498,0.0000868248,0.000019464203,0.000012022721,0.000009918016,0.00007113729],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988065,0.00028354974,0.00040335563,0.00028657066,0.00006820993,0.00015185018],"domain_scores_gemma":[0.99903363,0.00035774152,0.00016759253,0.0003062548,0.00010277759,0.000032025964],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016661448,0.00011591407,0.00052604685,0.00004489028,0.00010330887,0.000011498232,0.00008525986,0.000056873647,0.000012467777],"category_scores_gemma":[0.0003077217,0.000067597066,0.000053302883,0.00012733502,0.0006531827,0.000070416005,0.000055304226,0.00019712256,9.134856e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017293345,0.000050993895,0.7365098,0.00020462011,0.00018068361,0.0000020310401,0.0021805528,0.0000064767933,0.25557998,0.0012057676,0.000029255118,0.0023205269],"study_design_scores_gemma":[0.0017304337,0.00018536793,0.9905331,0.00016779304,0.00017512222,0.000043217082,0.0012916812,0.0032509044,0.0011046849,0.0013899724,0.00005590696,0.0000718159],"about_ca_topic_score_codex":0.0012274707,"about_ca_topic_score_gemma":0.00092196715,"teacher_disagreement_score":0.2544753,"about_ca_system_score_codex":0.0001072734,"about_ca_system_score_gemma":0.00010656982,"threshold_uncertainty_score":0.27565283},"labels":[],"label_agreement":null},{"id":"W4404467812","doi":"10.1164/rccm.202410-2045st","title":"Treatment of Invasive Pulmonary Aspergillosis and Preventive and Empirical Therapy for Invasive Candidiasis in Adult Pulmonary and Critical Care Patients: An Official American Thoracic Society Clinical Practice Guideline","year":2024,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Toronto General Hospital Research Institute, University Health Network; University of Texas MD Anderson Cancer Center; Amplyx; Université Paris Diderot; Cidara Therapeutics; Pfizer; University of Pittsburgh; Sunovion; Gilead Sciences; GlaxoSmithKline; Cleveland Clinic","keywords":"Medicine; Echinocandin; Intensive care medicine; Guideline; Aspergillosis; Voriconazole; Neutropenia; Internal medicine; Antifungal; Chemotherapy; Immunology; Dermatology; Fluconazole; Pathology","score_opus":0.051747519625075525,"score_gpt":0.44389600362086523,"score_spread":0.3921484839957897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404467812","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.959202,0.034471843,0.00018595638,0.00531507,0.00011881324,0.00052762363,0.00010458556,0.000011361637,0.00006278285],"genre_scores_gemma":[0.98429024,0.009301955,0.0025958193,0.0032115446,0.0005191824,0.000023952367,0.000022492613,0.00003283031,0.000002010895],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9965836,0.00064056425,0.0012906599,0.0006332857,0.00050562795,0.00034627054],"domain_scores_gemma":[0.991954,0.005046329,0.0002479584,0.00020700977,0.001894162,0.00065049634],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0007247119,0.00034250217,0.0013494408,0.00018282958,0.00013106609,0.000031847045,0.000072447365,0.00013546932,0.000010204544],"category_scores_gemma":[0.006244927,0.0002372506,0.00021389395,0.00034338515,0.0042874883,0.00036926227,0.000044462948,0.00043784882,1.0720386e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005736788,0.00071938103,0.4527493,0.0008506003,0.00016380493,0.0005349395,0.006791864,1.3196116e-7,0.0003811587,0.000079645,0.00008410266,0.5319083],"study_design_scores_gemma":[0.0043435707,0.10831002,0.569601,0.0018496027,0.0020740936,0.00049797184,0.3071802,0.00011089746,0.00048304992,0.00020251443,0.004852299,0.00049477606],"about_ca_topic_score_codex":0.00018716507,"about_ca_topic_score_gemma":0.0001313912,"teacher_disagreement_score":0.5314135,"about_ca_system_score_codex":0.00015028761,"about_ca_system_score_gemma":0.00064234243,"threshold_uncertainty_score":0.99842227},"labels":[],"label_agreement":null},{"id":"W4404555543","doi":"10.1111/myc.70001","title":"The In Vitro Activity of Rezafungin Against Uncommon Species of <i>Candida</i>","year":2024,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Genentech; U.S. Food and Drug Administration; National Institutes of Health; Astellas Pharma; Basilea Pharmaceutica; TenNor Therapeutics; Carnegie Mellon University; Astellas Foundation for Research on Metabolic Disorders; Ohio State University; Nabriva Therapeutics; Pfizer; Melinta Therapeutics; Entasis Therapeutics; Wockhardt; Mundipharma International; Zoetis; Menarini Group; McGill University; Roche; Cidara Therapeutics; Medpace; Harvard University; Meiji Seika Pharma; Shionogi; National Cancer Institute; Gilead Sciences; GlaxoSmithKline; Dr. Falk Pharma","keywords":"Candida auris; Echinocandin; Broth microdilution; Fluconazole; Echinocandins; Microbiology; Candida dubliniensis; Biology; Minimum inhibitory concentration; Antifungal; Corpus albicans; Caspofungin; Antimicrobial","score_opus":0.015886092725688052,"score_gpt":0.2744423396442611,"score_spread":0.2585562469185731,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404555543","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98167044,0.003520436,0.000016281347,0.00047280508,0.000108150525,0.00013566659,0.000025830963,0.000019931107,0.014030452],"genre_scores_gemma":[0.99741584,0.0007642042,0.000038927745,0.00003780408,0.000040588937,0.0000037572138,0.0000041838694,0.000007908439,0.001686762],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928826,0.00003085357,0.00020593515,0.00013611763,0.00020170417,0.00013712107],"domain_scores_gemma":[0.99922717,0.00039435015,0.000039478302,0.00027304236,0.000037909314,0.000028051576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032512145,0.000077322984,0.00024547323,0.000053982094,0.00002662521,0.0000094815105,0.00007231089,0.00004126473,0.000020497528],"category_scores_gemma":[0.00018688085,0.000047750447,0.00010096791,0.00025606612,0.00015110653,0.00004945589,0.000029654953,0.00014882053,0.000005780423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080545543,0.00011644529,0.048190553,0.0003937445,0.00003360528,0.000027179076,0.00021707627,0.0000018156716,0.92466944,0.00048299323,0.001392007,0.023669653],"study_design_scores_gemma":[0.0002387373,0.0000979068,0.23257867,0.00033321124,0.000025151763,0.0000012288558,0.00034020262,0.000117940464,0.7537,0.00021455609,0.012293695,0.00005867747],"about_ca_topic_score_codex":0.0001017958,"about_ca_topic_score_gemma":0.00028958256,"teacher_disagreement_score":0.18438812,"about_ca_system_score_codex":0.000052594,"about_ca_system_score_gemma":0.000103769344,"threshold_uncertainty_score":0.19472067},"labels":[],"label_agreement":null},{"id":"W4404556995","doi":"10.2196/57905","title":"Comparative Evaluation of Effectiveness of Standard of Care Alone and in Combination With Homoeopathic Treatment in COVID-19–Related Rhino-Orbito-Cerebral Mucormycosis (ROCM): Protocol for a Single Blind, Randomized Controlled Trial","year":2024,"lang":"en","type":"article","venue":"JMIR Research Protocols","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Randomized controlled trial; Medicine; Protocol (science); Single blind; Coronavirus disease 2019 (COVID-19); Alternative medicine; Surgery; Disease; Internal medicine; Pathology","score_opus":0.18523050710159386,"score_gpt":0.551217800375079,"score_spread":0.3659872932734851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404556995","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38173524,0.00003340227,0.000057000292,0.000032135933,0.0000028319062,0.6179829,0.00002969343,0.000009123122,0.00011765161],"genre_scores_gemma":[0.49309745,5.084895e-7,0.00004904638,5.9403663e-7,0.0000053286058,0.506807,0.000023106384,0.00000913039,0.0000077714085],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9917697,0.00500994,0.0011059929,0.00045304536,0.0013824396,0.00027889924],"domain_scores_gemma":[0.993472,0.0041667554,0.00029403696,0.00026768754,0.0016905654,0.000108989516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.014740408,0.00021031607,0.0023401554,0.00069412135,0.000052330128,0.000030604224,0.000079644306,0.0001723631,0.000030419467],"category_scores_gemma":[0.0021803065,0.0001338441,0.00022403931,0.00081817026,0.0005610215,0.00015422025,0.000028993794,0.00028810045,3.0932358e-7],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9628476,0.003366752,0.004998566,0.015505065,0.00021624877,0.000009022093,0.0044615194,0.00005620688,0.0074609485,0.0002633612,0.0000030247704,0.0008116778],"study_design_scores_gemma":[0.91856277,0.032535937,0.0010945793,0.013706313,0.0000876724,0.0000017006234,0.0010300664,0.0034210766,0.028299876,0.001139957,0.000020498152,0.00009955716],"about_ca_topic_score_codex":0.00016677145,"about_ca_topic_score_gemma":0.00068106287,"teacher_disagreement_score":0.11136223,"about_ca_system_score_codex":0.0011386585,"about_ca_system_score_gemma":0.0030874663,"threshold_uncertainty_score":0.54770327},"labels":[],"label_agreement":null},{"id":"W4404593111","doi":"10.1093/glycob/cwae094","title":"A self-immolative Kdn-glycoside substrate enables high-throughput screening for inhibitors of Kdnases","year":2024,"lang":"en","type":"article","venue":"Glycobiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Canadian Glycomics Network; Natural Sciences and Engineering Research Council of Canada; Simon Fraser University","keywords":"Aspergillus fumigatus; Aspergillus terreus; Chemistry; High-throughput screening; Aspergillosis; Drug discovery; Small molecule; Aspergillus; Pathogen; Virulence; Chemical biology; Trichophyton rubrum; Microbiology; Fungus; Biochemistry; Biology; Immunology; Antifungal","score_opus":0.024745081728636913,"score_gpt":0.3033079106848803,"score_spread":0.27856282895624335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404593111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98913276,0.003329311,0.0045188502,0.0005581706,0.0005688482,0.0006567985,0.00016218101,0.00019828208,0.00087477226],"genre_scores_gemma":[0.99049526,0.00016128595,0.008019036,0.00013815475,0.00037670255,0.00004677861,0.00013349928,0.000027475087,0.00060182187],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985019,0.000069066264,0.00045038713,0.0004837292,0.000108985674,0.00038594514],"domain_scores_gemma":[0.9988075,0.0005901361,0.00009009562,0.00026204492,0.00016436064,0.0000858522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003461014,0.00020357031,0.00053059566,0.00011941559,0.00007442583,0.00001408442,0.000086270484,0.00021832791,0.00009556469],"category_scores_gemma":[0.000243504,0.00015823265,0.00022680816,0.00023490391,0.00023127727,0.000101038844,0.00004206249,0.00019653434,0.000023002407],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009702619,0.0012008471,0.27201417,0.00921652,0.0032502702,0.00068019686,0.0045599635,0.000053058167,0.57923365,0.065443166,0.031537507,0.023108069],"study_design_scores_gemma":[0.00709928,0.008343588,0.17876437,0.0025110347,0.0016899325,0.00027941217,0.003797204,0.002193877,0.65262806,0.016337879,0.12498975,0.0013655911],"about_ca_topic_score_codex":0.00013240252,"about_ca_topic_score_gemma":0.000114462906,"teacher_disagreement_score":0.09345224,"about_ca_system_score_codex":0.00006294795,"about_ca_system_score_gemma":0.00022460413,"threshold_uncertainty_score":0.645254},"labels":[],"label_agreement":null},{"id":"W4404594393","doi":"10.21203/rs.3.rs-5359114/v1","title":"Targeting epigenetic regulators to overcome drug resistance in the emerging human fungal pathogen Candida auris","year":2024,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Candida auris; Biology; Antifungal drug; Echinocandin; Drug resistance; Galleria mellonella; Microbiology; Caspofungin; Echinocandins; Epigenetics; Virulence; Genetics; Gene; Candida albicans; Amphotericin B; Antifungal; Fluconazole","score_opus":0.04253464183537446,"score_gpt":0.4038630964986141,"score_spread":0.36132845466323965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404594393","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96866727,0.01608127,0.0000212576,0.006506672,0.0002510873,0.0028497223,0.00017106366,0.000098886005,0.005352753],"genre_scores_gemma":[0.98784906,0.000356247,0.0003028381,0.00014618995,0.0006864733,0.000389917,0.00016106192,0.000098455814,0.010009737],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9924673,0.0012220996,0.00085019076,0.0014517659,0.0026727545,0.0013359152],"domain_scores_gemma":[0.9966928,0.00049847865,0.00009515374,0.0018274754,0.0005055832,0.00038051853],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0078008487,0.00045199165,0.0007595125,0.00078262255,0.0005057697,0.00025434536,0.0008273507,0.00034292284,0.00024989623],"category_scores_gemma":[0.0013527081,0.00033909903,0.0003498618,0.0014506669,0.00024475242,0.00004294818,0.0014857204,0.0041320384,0.00016325418],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019145365,0.00094735384,0.6479189,0.036081318,0.0004089352,0.0077273147,0.073419645,0.00043743424,0.03915156,0.0057447664,0.1832902,0.0029580302],"study_design_scores_gemma":[0.0010002402,0.0003366313,0.90064317,0.015965644,0.00015390043,0.000010542852,0.015278381,0.00023756483,0.0012582687,0.029672561,0.034254543,0.0011885333],"about_ca_topic_score_codex":0.0015812574,"about_ca_topic_score_gemma":0.0072626257,"teacher_disagreement_score":0.2527243,"about_ca_system_score_codex":0.0010869764,"about_ca_system_score_gemma":0.0009573057,"threshold_uncertainty_score":0.9999061},"labels":[],"label_agreement":null},{"id":"W4404792572","doi":"10.3390/jof10120829","title":"Current Analytical Methods and Challenges for the Clinical Diagnosis of Invasive Pulmonary Aspergillosis Infection","year":2024,"lang":"en","type":"review","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Aspergillosis; Pulmonary aspergillosis; Incidence (geometry); Mortality rate; Polymerase chain reaction; Medicine; Biology; Intensive care medicine; Pathology; Internal medicine; Immunology; Biochemistry","score_opus":0.329847665402967,"score_gpt":0.539468103923779,"score_spread":0.20962043852081197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404792572","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014381672,0.9974056,0.00022519272,0.0005702847,0.0009849236,0.0005612153,0.000025278843,0.000004983926,0.00007871793],"genre_scores_gemma":[0.0004125239,0.9975229,0.0008996041,0.000016412243,0.0010490109,0.000030079595,0.0000035118087,0.000027125809,0.000038820657],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972734,0.00042711772,0.0015758071,0.00026422535,0.00030114388,0.00015832981],"domain_scores_gemma":[0.99208647,0.0063262805,0.00078916067,0.00027400826,0.0003640002,0.00016005493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037989204,0.00025097944,0.0022430161,0.0002109205,0.00004169144,0.000016207316,0.000121568744,0.00028851422,0.00002619952],"category_scores_gemma":[0.0028392382,0.0001230871,0.0020083725,0.0002037648,0.00017221604,0.000058865284,0.00007058862,0.0009771266,0.0000030011715],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000099924975,0.00023963195,0.0031882976,0.040043227,0.0012055374,0.0000234202,0.000024184821,5.146928e-8,3.5017175e-7,0.00016035543,0.0010142913,0.9540007],"study_design_scores_gemma":[0.00018532212,0.00082348404,0.008354497,0.026388267,0.01727327,0.00021123796,0.000045415196,0.00003312014,0.0000023548996,0.00018766824,0.9463809,0.000114433955],"about_ca_topic_score_codex":0.0000022041188,"about_ca_topic_score_gemma":0.000006462118,"teacher_disagreement_score":0.9538863,"about_ca_system_score_codex":0.00008960466,"about_ca_system_score_gemma":0.0005339206,"threshold_uncertainty_score":0.50193465},"labels":[],"label_agreement":null},{"id":"W4404858082","doi":"10.1038/s44259-024-00057-0","title":"The putative error prone polymerase REV1 mediates DNA damage and drug resistance in Candida albicans","year":2024,"lang":"en","type":"article","venue":"npj Antimicrobials and Resistance","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Université du Québec à Montréal; Public Health Agency of Canada; University of Toronto; PROTEO; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research; Public Health Agency; Government of Canada; Public Health Agency of Canada; Genome Canada","keywords":"Candida albicans; DNA damage; Biology; Mutagenesis; DNA polymerase; DNA repair; Polymerase; DNA; Gene; Antifungal drug; Mutation; Genetics; Microbiology","score_opus":0.009074180336745919,"score_gpt":0.27212844470860814,"score_spread":0.26305426437186225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404858082","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9042626,0.06577902,0.00003730696,0.024688154,0.00021114625,0.0008081663,0.00015220392,0.000085954955,0.0039754626],"genre_scores_gemma":[0.9583457,0.007870358,0.00077980565,0.0005955575,0.00011349079,0.00003235326,0.000024880621,0.000041631018,0.032196205],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99767095,0.00018576355,0.00056058797,0.0007584011,0.00027975178,0.0005445204],"domain_scores_gemma":[0.9986217,0.0005863014,0.00010433656,0.00040238185,0.000094483774,0.00019078216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010065963,0.00031825513,0.0005493543,0.00011054135,0.00040957704,0.00019987884,0.00013604929,0.00012336309,0.0000361949],"category_scores_gemma":[0.0002824795,0.00021181659,0.0000905559,0.0004565054,0.0008786857,0.00019042818,0.000054685966,0.00042097075,0.000008273615],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007250303,0.0005385006,0.034730192,0.0087320255,0.0005302523,0.002764907,0.016170755,0.0000013458916,0.75927466,0.022446804,0.14188957,0.0056706443],"study_design_scores_gemma":[0.0070803794,0.0003024538,0.5051512,0.014412994,0.00072828546,0.000103004946,0.0063779866,0.0001814109,0.11626705,0.011370062,0.335502,0.0025231494],"about_ca_topic_score_codex":0.0001498559,"about_ca_topic_score_gemma":0.018100249,"teacher_disagreement_score":0.64300764,"about_ca_system_score_codex":0.00009905801,"about_ca_system_score_gemma":0.00027826166,"threshold_uncertainty_score":0.99981683},"labels":[],"label_agreement":null},{"id":"W4404980973","doi":"10.1080/14737159.2024.2436396","title":"Diagnosis and management of invasive fungal diseases by next-generation sequencing: are we there yet?","year":2024,"lang":"en","type":"review","venue":"Expert Review of Molecular Diagnostics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"National Cancer Institute","keywords":"Metagenomics; DNA sequencing; Computational biology; Whole genome sequencing; Medical diagnosis; Biology; Medicine; Genome; Genetics; Pathology; Gene","score_opus":0.10049317498917229,"score_gpt":0.3698576346740712,"score_spread":0.26936445968489886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404980973","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006576866,0.9961691,0.000073451905,0.0003827609,0.00018971866,0.0025372065,0.00044303,0.000025674995,0.00011330778],"genre_scores_gemma":[0.00017202544,0.9974511,0.00045053908,0.00049479096,0.000098064054,0.0006057091,0.00055709813,0.00008424061,0.00008642119],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970904,0.00024312081,0.0011540893,0.00066466,0.0005993147,0.00024841522],"domain_scores_gemma":[0.99775165,0.00043728863,0.00059489184,0.00081118697,0.00020624259,0.00019870773],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023528241,0.0005647149,0.002651693,0.00009937446,0.00003708848,0.000026205294,0.00021099803,0.00021808321,0.00008006656],"category_scores_gemma":[0.0010254841,0.00040785776,0.00082890544,0.00037279841,0.00017886436,0.00005672362,0.00018086523,0.00026931768,0.000015100687],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000037412228,0.0001714276,0.00012062116,0.5722301,0.0006594557,0.0005751585,0.00002595222,4.7032753e-8,0.000031660515,0.000182805,0.07537122,0.3506278],"study_design_scores_gemma":[0.00010699192,0.000107060856,0.000014149319,0.4915101,0.0060849786,0.000015351785,0.00006481381,0.0000011758473,0.0002440834,0.000019240759,0.50157475,0.00025730304],"about_ca_topic_score_codex":0.00001190431,"about_ca_topic_score_gemma":0.000005337192,"teacher_disagreement_score":0.42620355,"about_ca_system_score_codex":0.00017593389,"about_ca_system_score_gemma":0.00031279566,"threshold_uncertainty_score":0.99983734},"labels":[],"label_agreement":null},{"id":"W4404991788","doi":"10.1016/j.mmcr.2024.100688","title":"Refractory fungal infection: Three case reports highlighting good practice","year":2024,"lang":"en","type":"article","venue":"Medical Mycology Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"University of Cambridge; Cambridge University Hospitals; Gilead Sciences","keywords":"Medicine; Refractory (planetary science); Clinical Practice; Intensive care medicine; Family medicine; Biology; Astrobiology","score_opus":0.018441354825034822,"score_gpt":0.3322114900573239,"score_spread":0.3137701352322891,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404991788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96053344,0.004568,0.00081389135,0.0056119873,0.004815938,0.000645513,0.0000035958421,0.00062170933,0.022385938],"genre_scores_gemma":[0.99474746,0.00022610133,0.00043062257,0.0012327794,0.0016073501,0.000076598095,0.000027262186,0.000056977067,0.0015948511],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9951736,0.0002770886,0.0015540391,0.001243712,0.0010877714,0.00066381256],"domain_scores_gemma":[0.99566275,0.0015914277,0.00042583756,0.0010521563,0.00038921554,0.00087860954],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00454727,0.00035885186,0.00074360805,0.00022345316,0.00035636075,0.000059919512,0.00002804424,0.0008476052,0.0029156161],"category_scores_gemma":[0.015985241,0.0002875933,0.0003202639,0.00055449054,0.0004210114,0.0003596462,0.00014233297,0.0017081304,0.00008539811],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011902277,0.00043398936,0.042353608,0.0004302796,0.00026975072,0.9356667,0.00014467393,5.4463555e-7,0.0002451877,0.00026100696,0.009312215,0.010763058],"study_design_scores_gemma":[0.00020847096,0.00045040506,0.005764874,0.00026473607,0.0005205581,0.7803297,0.00012822011,0.00009975182,0.00012149224,0.00022848306,0.21167304,0.0002102754],"about_ca_topic_score_codex":0.0011827373,"about_ca_topic_score_gemma":0.0017937911,"teacher_disagreement_score":0.20236082,"about_ca_system_score_codex":0.00041783237,"about_ca_system_score_gemma":0.0018213716,"threshold_uncertainty_score":0.9999576},"labels":[],"label_agreement":null},{"id":"W4404999558","doi":"10.1016/b978-0-443-21968-9.00028-0","title":"Invasive fungal orbital disease","year":2024,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Fungal disease; Medicine; Disease; Dermatology; Pathology","score_opus":0.018459689162086953,"score_gpt":0.2629010097845389,"score_spread":0.24444132062245194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404999558","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001838582,0.008925614,6.412024e-7,0.00026975153,0.0005314614,0.0008349743,0.00020779161,0.00017009836,0.98722106],"genre_scores_gemma":[0.05802291,0.00018433234,0.00004167742,0.0005576117,0.00089327083,0.00002820001,0.00010950443,0.00014225498,0.94002026],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99773115,0.000011751319,0.00050704106,0.0007965023,0.0005952874,0.0003582801],"domain_scores_gemma":[0.9982234,0.000084848456,0.0001135507,0.00086681143,0.00015990199,0.0005514673],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001638665,0.00052422064,0.0007674687,0.00015230101,0.000081692764,0.000050574436,0.00015436375,0.00033772198,0.0012625916],"category_scores_gemma":[0.00009901789,0.0004317104,0.00069436163,0.000015720987,0.0003022172,0.00003562318,0.00015072025,0.00092443725,0.0030444555],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013035567,0.00007610031,0.0016232794,0.0054653054,0.0010373013,0.017519547,0.0003606306,1.16395995e-7,0.00023329836,0.06256258,0.0061217225,0.9036966],"study_design_scores_gemma":[0.0003873724,0.00017827716,0.001353019,0.0032250676,0.001250702,0.000072957635,0.00002136898,0.0000020840976,0.00004754854,0.034150995,0.9587701,0.0005404902],"about_ca_topic_score_codex":4.3439928e-7,"about_ca_topic_score_gemma":0.000044592423,"teacher_disagreement_score":0.9526484,"about_ca_system_score_codex":0.0002102533,"about_ca_system_score_gemma":0.000810375,"threshold_uncertainty_score":0.9998135},"labels":[],"label_agreement":null},{"id":"W4405201117","doi":"10.1503/cmaj.240881-f","title":"Mucormycose cutanée peu après une transplantation rénale","year":2024,"lang":"fr","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Gynecology; Transplantation; Surgery","score_opus":0.013031278349925093,"score_gpt":0.2650405343619245,"score_spread":0.2520092560119994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405201117","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3200782,0.12484241,0.0036362526,0.47113305,0.033800628,0.0006002473,0.00080005435,0.00014960379,0.044959534],"genre_scores_gemma":[0.9099006,0.026126036,0.00012889957,0.009138568,0.011920589,0.0000063841644,0.00009401366,0.00005667481,0.04262822],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99494743,0.00035860177,0.0008719302,0.00037208037,0.002310859,0.0011391076],"domain_scores_gemma":[0.9950026,0.0005357087,0.00014628698,0.0001640286,0.0004910038,0.003660323],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0034117687,0.00026833953,0.00043823206,0.00032554698,0.0003983869,0.00031187807,0.00021601567,0.0010061744,0.025469152],"category_scores_gemma":[0.0018415825,0.00025905122,0.00035718325,0.00083574373,0.00015387658,0.00042612717,0.000007782818,0.002704016,0.0030455282],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.00009847323,0.00014770728,0.0771327,0.00094661175,0.00077109854,0.028293783,0.0041936333,0.000009302644,0.00015150521,0.006325004,0.50375086,0.3781793],"study_design_scores_gemma":[0.0010187087,0.00018155528,0.060702473,0.0027583952,0.00041012946,0.002987483,0.0014859508,0.0029531107,0.000035005716,0.0010724529,0.9260849,0.0003098341],"about_ca_topic_score_codex":0.00970061,"about_ca_topic_score_gemma":0.13640913,"teacher_disagreement_score":0.5898224,"about_ca_system_score_codex":0.004435537,"about_ca_system_score_gemma":0.013053574,"threshold_uncertainty_score":0.9999862},"labels":[],"label_agreement":null},{"id":"W4405576837","doi":"10.1093/rpsppr/rqae031","title":"Successful treatment of invasive <i>Aspergillus</i> rhinosinusitis and orbital aspergillosis with oral isavuconazole in a patient with contraindications to conventional first- and second-line therapy","year":2024,"lang":"en","type":"article","venue":"RPS Pharmacy and Pharmacology Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Western University; St. Joseph’s Healthcare Hamilton; St Joseph's Health Care","funders":"","keywords":"Voriconazole; Medicine; Aspergillosis; Sinusitis; Surgery; Mucormycosis; Caspofungin; Amphotericin B; Fungal sinusitis; Paranasal sinuses; Mycosis; Contraindication; Radiology; Dermatology; Antifungal; Pathology","score_opus":0.018477306037607055,"score_gpt":0.30780348731210927,"score_spread":0.2893261812745022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405576837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896397,0.0068948506,0.000012444814,0.0019136708,0.00009798964,0.0010526379,0.00011089266,0.000026952133,0.00025088148],"genre_scores_gemma":[0.99618787,0.0025186099,0.00014186192,0.00071158283,0.000044613043,0.00015011866,0.00006921726,0.000018283334,0.00015786028],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986557,0.000055611377,0.00040831693,0.0004976081,0.00015935644,0.00022343559],"domain_scores_gemma":[0.99928284,0.00018076747,0.00010835575,0.000104652594,0.00009635331,0.0002270394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014280734,0.00022178545,0.00044721438,0.00014441772,0.00009844716,0.000020479687,0.000021881553,0.00004875976,0.0005729668],"category_scores_gemma":[0.000007997065,0.0001535963,0.000042650438,0.0002084104,0.00032514255,0.00014826114,0.00002154132,0.00012491008,7.365778e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004382431,0.0009367879,0.9268393,0.0003806881,0.0008204976,0.008851642,0.0027968439,0.000010916261,0.044789206,0.000057158268,0.00070734654,0.009427215],"study_design_scores_gemma":[0.021908741,0.010081364,0.5641114,0.0007666681,0.0013705262,0.018046742,0.0009864483,0.00061842945,0.32031026,0.00015463277,0.060779575,0.0008652125],"about_ca_topic_score_codex":0.00024005241,"about_ca_topic_score_gemma":0.000783319,"teacher_disagreement_score":0.36272788,"about_ca_system_score_codex":0.00006322848,"about_ca_system_score_gemma":0.00024338512,"threshold_uncertainty_score":0.6273585},"labels":[],"label_agreement":null},{"id":"W4405640570","doi":"10.1128/jcm.01207-24","title":"Use of voriconazole to predict susceptibility and resistance to isavuconazole for <i>Aspergillus fumigatus</i> using CLSI methods and interpretive criteria","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Genentech; U.S. Food and Drug Administration; National Institutes of Health; Astellas Pharma; Basilea Pharmaceutica; Ohio State University; Nabriva Therapeutics; Pfizer; Melinta Therapeutics; Entasis Therapeutics; Wockhardt; Mundipharma International; Zoetis; Menarini Group; McGill University; Roche; Cidara Therapeutics; Medpace; Carnegie Mellon University; TenNor Therapeutics; Harvard University; Meiji Seika Pharma; Shionogi; National Cancer Institute; Gilead Sciences; GlaxoSmithKline; Dr. Falk Pharma","keywords":"Voriconazole; Aspergillus fumigatus; Posaconazole; Broth microdilution; Aspergillus; Medicine; Biology; Microbiology; Antifungal; Minimum inhibitory concentration; Antibiotics","score_opus":0.10283870861476022,"score_gpt":0.4818609321093736,"score_spread":0.37902222349461334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405640570","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97230893,0.0023359596,0.02213428,0.0015887967,0.0008755842,0.00047599722,0.00023223514,0.000010994149,0.000037226426],"genre_scores_gemma":[0.8726639,0.00022437621,0.12541366,0.001225153,0.0002672377,0.0000024867888,0.0000033362546,0.00001781365,0.00018202985],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9970674,0.00045487288,0.0016766175,0.00046297678,0.00006733021,0.00027082843],"domain_scores_gemma":[0.9948787,0.003646332,0.0002803543,0.00026024246,0.0005771836,0.0003571995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034966536,0.00018686322,0.0011962762,0.00014254903,0.000042296553,0.0000306597,0.0001094797,0.0002579319,0.000039130926],"category_scores_gemma":[0.0071787834,0.00013891254,0.00031364127,0.00017643462,0.0004206779,0.00014008537,0.00013326068,0.00042064642,0.0000012352837],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0089097135,0.00017760237,0.057373617,0.0005783031,0.00027825445,0.000024815074,0.0005459391,0.000001795655,0.9193462,0.00021510765,0.005149863,0.007398771],"study_design_scores_gemma":[0.006160745,0.019996434,0.5020737,0.009014106,0.0022783426,0.0011636805,0.001687618,0.0009943269,0.11953805,0.0043360014,0.33157367,0.0011833238],"about_ca_topic_score_codex":0.000010022762,"about_ca_topic_score_gemma":0.00006866801,"teacher_disagreement_score":0.79980814,"about_ca_system_score_codex":0.00007488483,"about_ca_system_score_gemma":0.0002781511,"threshold_uncertainty_score":0.8594193},"labels":[],"label_agreement":null},{"id":"W4405667050","doi":"10.14740/jmc5042","title":"Pulmonary Mucormycosis in an Older Acute Myeloid Leukemia Patient","year":2024,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Myeloid leukemia; Mucormycosis; Myeloid; Leukemia; Intensive care medicine; Internal medicine; Surgery","score_opus":0.022102192332218457,"score_gpt":0.3260149470010661,"score_spread":0.30391275466884765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405667050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99049574,0.0054785055,0.00007896446,0.003005816,0.00044385385,0.000089934874,0.0000065554427,0.000017990227,0.00038264532],"genre_scores_gemma":[0.9968877,0.001423039,0.00014087284,0.0009420662,0.00045415486,0.0000021802066,0.0000052969303,0.000014520787,0.0001301893],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9975317,0.0000775131,0.0006551211,0.0001741443,0.0013425307,0.00021898506],"domain_scores_gemma":[0.9988716,0.00027411897,0.00008231345,0.00015923657,0.00011640792,0.00049628067],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00079773774,0.00012020926,0.000369549,0.00018891822,0.000027398659,0.000028690258,0.00012805729,0.00016816997,0.001113099],"category_scores_gemma":[0.00069941016,0.00007814808,0.00018595369,0.0002460654,0.00010182162,0.00022755329,0.0000355137,0.0007579736,0.000019586008],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017589229,0.0011069075,0.18700042,0.00063705957,0.00022166176,0.2941125,0.0012310902,0.0000034103632,0.004564103,0.00014876488,0.017436272,0.49177888],"study_design_scores_gemma":[0.003447155,0.00784425,0.8508976,0.010695945,0.0009133123,0.07333166,0.0060158777,0.0047445167,0.0046366975,0.000649655,0.036192697,0.00063061406],"about_ca_topic_score_codex":0.000055765307,"about_ca_topic_score_gemma":0.00006887886,"teacher_disagreement_score":0.6638972,"about_ca_system_score_codex":0.0002913579,"about_ca_system_score_gemma":0.0010581559,"threshold_uncertainty_score":0.9998},"labels":[],"label_agreement":null},{"id":"W4405950967","doi":"10.1093/jacamr/dlae209","title":"Antifungal stewardship in the UK: where are we now?","year":2024,"lang":"en","type":"article","venue":"JAC-Antimicrobial Resistance","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Pfizer UK; Pfizer","keywords":"Stewardship (theology); Antimicrobial stewardship; Thematic analysis; Antifungal; Medicine; Medical education; Business; Public relations; Environmental resource management; Political science; Antibiotic resistance; Qualitative research; Sociology","score_opus":0.02457075078239577,"score_gpt":0.29475872777224527,"score_spread":0.2701879769898495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405950967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9019931,0.019440265,0.00038308575,0.052093714,0.0010744727,0.0013083541,0.00020923943,0.00030027263,0.023197489],"genre_scores_gemma":[0.96743816,0.0036988917,0.00063118996,0.0013745673,0.00044598972,0.00002577295,0.000024326755,0.000055963937,0.026305126],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969407,0.00020680635,0.0006304723,0.00086969906,0.00063645886,0.000715912],"domain_scores_gemma":[0.9982935,0.0003648274,0.000107536755,0.0009703446,0.00013219604,0.00013155132],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009488779,0.00038205882,0.00061391544,0.00018604091,0.00018369716,0.00024779217,0.0004383795,0.0002451719,0.0004136755],"category_scores_gemma":[0.00016961839,0.00026911628,0.00036652372,0.001039181,0.0002940789,0.00019416175,0.00006212252,0.0009305718,0.0003620195],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014667008,0.00033905826,0.15273862,0.0033582316,0.000105066254,0.0022847834,0.0011244748,0.0000053661092,0.05117524,0.002549344,0.78392017,0.0009329644],"study_design_scores_gemma":[0.001469395,0.00014180173,0.38674372,0.007914155,0.00022664243,0.00012415175,0.0012033515,0.000073072515,0.006854449,0.00060251076,0.59391564,0.00073109934],"about_ca_topic_score_codex":0.0000518561,"about_ca_topic_score_gemma":0.006041253,"teacher_disagreement_score":0.23400511,"about_ca_system_score_codex":0.00022353203,"about_ca_system_score_gemma":0.00037264006,"threshold_uncertainty_score":0.9999761},"labels":[],"label_agreement":null},{"id":"W4406128603","doi":"10.1101/2025.01.06.630955","title":"Butyrolactol A potentiates caspofungin efficacy against resistant fungi via phospholipid flippase inhibition","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia; University of Toronto; McMaster University","funders":"Canadian Institutes of Health Research; National Institutes of Health; Canada Research Chairs","keywords":"Caspofungin; Flippase; Phospholipid; Echinocandins; Chemistry; Microbiology; Biochemistry; Pharmacology; Phosphatidylserine; Biology; Antifungal; Membrane","score_opus":0.01229708790348902,"score_gpt":0.23928168265615035,"score_spread":0.22698459475266133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406128603","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9850069,0.00640233,0.0022840907,0.0005071889,0.001658879,0.0021819586,0.0010077328,0.00084729533,0.00010358508],"genre_scores_gemma":[0.9942146,0.0010935684,0.002632694,0.0009140237,0.0006293263,0.00019551952,0.000011176764,0.00015362333,0.00015545262],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.994399,0.00023297622,0.0012922836,0.0020242592,0.0009368036,0.0011146606],"domain_scores_gemma":[0.99473464,0.00018912106,0.0005993339,0.0026751333,0.0011149292,0.00068681187],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010230289,0.0011003964,0.0015267698,0.00058079767,0.00034772555,0.00021920497,0.000425744,0.0011621314,0.00015152567],"category_scores_gemma":[0.00073390943,0.0011273639,0.000721978,0.000997445,0.0002559171,0.00019815347,0.00057267153,0.0018767617,0.00015758254],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016969495,0.0009944728,0.021191938,0.0027866901,0.0005021387,0.000835029,0.00002330204,0.000026794773,0.9698264,0.00023737403,0.0018582261,0.000020677246],"study_design_scores_gemma":[0.003147785,0.0002279337,0.35039908,0.0045360164,0.0010279209,9.064287e-8,0.000013892244,0.00060491986,0.63236976,0.000007028797,0.0061466363,0.0015189731],"about_ca_topic_score_codex":0.00014252345,"about_ca_topic_score_gemma":0.000019328494,"teacher_disagreement_score":0.33745667,"about_ca_system_score_codex":0.0009945615,"about_ca_system_score_gemma":0.0018176174,"threshold_uncertainty_score":0.9991177},"labels":[],"label_agreement":null},{"id":"W4406179279","doi":"10.21203/rs.3.rs-5524306/v1","title":"Structure-guided optimization of small molecules targeting the yeast casein kinase, Yck2, as a therapeutic strategy to combat Candida albicans","year":2025,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Toronto","funders":"Genentech; Canadian Institute for Advanced Research; Université de Nantes; National Institutes of Health; Ontario Genomics; Genome Canada; University of Texas Southwestern Medical Center; McGill University; Ontario Genomics Institute; European Federation of Pharmaceutical Industries and Associations; Merck KGaA; Bayer; Bristol-Myers Squibb","keywords":"Candida albicans; Yeast; Casein kinase 2; Casein kinase 1; Microbiology; Chemistry; Kinase; Medicine; Cancer research; Biology; Protein kinase A; Biochemistry; Mitogen-activated protein kinase kinase","score_opus":0.07416520894600544,"score_gpt":0.40505930445042404,"score_spread":0.3308940955044186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406179279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.963069,0.0056009204,0.010264059,0.0047865855,0.00027732912,0.0059787333,0.0012589436,0.000097392636,0.008667007],"genre_scores_gemma":[0.99562675,0.00038938996,0.0013021708,0.0002106879,0.00019251117,0.00010460773,0.0004296835,0.000036566667,0.0017076468],"study_design_codex":"simulation_or_modeling","study_design_gemma":"observational","domain_scores_codex":[0.9960979,0.00078948826,0.000581729,0.0007232487,0.0011748796,0.00063273887],"domain_scores_gemma":[0.9965921,0.00034142897,0.00014176706,0.00114943,0.0015209053,0.0002543368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013050855,0.0003234246,0.0006224828,0.00034012567,0.00025728202,0.00009733511,0.000522674,0.0003464302,0.0005766134],"category_scores_gemma":[0.0009823074,0.00022754361,0.00022575082,0.0007491188,0.00028773796,0.000028315311,0.0005565631,0.0014785263,0.000008160985],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009133241,0.0020648479,0.08620567,0.033417802,0.0027169082,0.00120989,0.01363359,0.68168294,0.05668205,0.018184807,0.019461058,0.07560718],"study_design_scores_gemma":[0.014374547,0.013701556,0.35753176,0.035731856,0.0024447169,0.0001524037,0.09854116,0.3035847,0.11567436,0.03415975,0.018491646,0.005611556],"about_ca_topic_score_codex":0.0055820667,"about_ca_topic_score_gemma":0.0024088821,"teacher_disagreement_score":0.37809825,"about_ca_system_score_codex":0.00036731153,"about_ca_system_score_gemma":0.0022940373,"threshold_uncertainty_score":0.9278959},"labels":[],"label_agreement":null},{"id":"W4406285404","doi":"10.1101/2025.01.10.632200","title":"Chemoproteomic Profiling of <i>C. albicans</i> for Characterization of Anti-fungal Kinase Inhibitors","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Genentech; Ontario Genomics; National Institutes of Health; UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill; Ontario Genomics Institute; European Federation of Pharmaceutical Industries and Associations; Merck KGaA; Genome Canada; McGill University; North Carolina Biotechnology Center; Bayer; Pfizer; Bristol-Myers Squibb","keywords":"Profiling (computer programming); Computational biology; Computer science; Biology; Chemistry; Programming language","score_opus":0.01290320983808768,"score_gpt":0.2440063096885793,"score_spread":0.23110309985049163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406285404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908559,0.00029428842,0.003985875,0.00013165837,0.0005946038,0.0026866153,0.0013319192,0.00010866082,0.000010498592],"genre_scores_gemma":[0.9921044,0.00015752314,0.007050337,0.00008935507,0.00029179707,0.00021910972,0.0000061091937,0.0000629594,0.000018374956],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972815,0.00006437497,0.0010453769,0.000826753,0.00039522612,0.0003867748],"domain_scores_gemma":[0.9965493,0.00007398188,0.00082714687,0.0011308751,0.0012627104,0.00015599554],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006912458,0.00043840136,0.0011940188,0.00029287438,0.00006917515,0.000022486473,0.00026670788,0.0005809587,0.000014607225],"category_scores_gemma":[0.00057559734,0.00045295781,0.00037771004,0.00046524833,0.00020348826,0.00009354459,0.00020608603,0.00048239957,0.0000018039572],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036680946,0.00028512577,0.1025741,0.007115688,0.0001489834,0.000006056458,0.000007977352,0.0000037100376,0.88922864,0.00022930409,0.000029879824,0.0000037436955],"study_design_scores_gemma":[0.00083113834,0.00009957706,0.17719191,0.0018267087,0.00027628688,5.2302305e-9,0.0000031536592,0.00017016986,0.81916314,0.000001241376,0.00016931978,0.0002673607],"about_ca_topic_score_codex":0.000027416529,"about_ca_topic_score_gemma":9.4879294e-7,"teacher_disagreement_score":0.07461781,"about_ca_system_score_codex":0.00018767729,"about_ca_system_score_gemma":0.0015502567,"threshold_uncertainty_score":0.9997922},"labels":[],"label_agreement":null},{"id":"W4406365506","doi":"10.1002/9781683670438.cmph0112","title":"Clinical Breakpoints and Epidemiological Cutoff Values","year":2023,"lang":"en","type":"other","venue":"ClinMicroNow","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Ste. Anne's Hospital","funders":"","keywords":"Cutoff; Breakpoint; Epidemiology; Computational biology; Medicine; Computer science; Biology; Genetics; Physics; Internal medicine; Gene","score_opus":0.06812736923443442,"score_gpt":0.4124854187586664,"score_spread":0.344358049524232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406365506","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.062344722,0.019499676,0.00038209188,0.0036262712,0.0034575835,0.0022239122,0.00034420312,0.0036580644,0.90446347],"genre_scores_gemma":[0.009610328,0.01176207,0.0017105507,0.001297024,0.0018391948,0.000013027736,0.00006678398,0.000671407,0.9730296],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977998,0.00019947636,0.0006738554,0.0008191207,0.00014688214,0.0003608467],"domain_scores_gemma":[0.99810046,0.0007468971,0.00021225556,0.0006251347,0.000040124403,0.00027511065],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0012729847,0.00031613596,0.0012619296,0.000091387345,0.000043144966,0.000011810813,0.000117900694,0.0009456162,0.0015307689],"category_scores_gemma":[0.0019801573,0.00023077603,0.00035493952,0.00008974483,0.000677351,0.000017175267,0.00012377834,0.0006878705,0.0018452753],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008843459,0.00009022563,0.32792717,0.00014452131,0.0001287643,0.00007083849,0.000006949104,7.2813973e-9,0.000023177394,0.0000563354,0.6510353,0.020428242],"study_design_scores_gemma":[0.0007827315,0.00031166227,0.40877837,0.0007077225,0.00022642358,0.000019742316,0.000028965982,0.0000087389335,0.0000062187087,0.000477242,0.5883953,0.00025686252],"about_ca_topic_score_codex":0.00007914964,"about_ca_topic_score_gemma":0.00021347079,"teacher_disagreement_score":0.0808512,"about_ca_system_score_codex":0.000040090486,"about_ca_system_score_gemma":0.000109039414,"threshold_uncertainty_score":0.99938196},"labels":[],"label_agreement":null},{"id":"W4406413147","doi":"10.1016/s1541-9800(12)70403-9","title":"10.1016/s1541-9800(12)70403-9","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Intensive care medicine; Microbiology; Biology","score_opus":0.0081941833941488,"score_gpt":0.20472146540453834,"score_spread":0.19652728201038955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406413147","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011941659,0.000112488255,0.0000015320951,0.0005695792,0.0000014083856,0.00027590315,0.000011844005,0.00012878847,0.9869568],"genre_scores_gemma":[0.007468455,9.863907e-7,0.0001453554,0.00019055967,0.00017815628,0.000010665337,0.000022204918,0.000023920864,0.9919597],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99886477,0.00002901106,0.00021452844,0.00030582814,0.0002713559,0.00031450205],"domain_scores_gemma":[0.9991384,0.000043133274,0.000020966725,0.00047856648,0.00006075981,0.00025813785],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018039612,0.00014767547,0.00027691,0.000050441362,0.000070451104,0.00001731756,0.000110996254,0.00008491637,0.99827695],"category_scores_gemma":[0.00009425675,0.0001272841,0.000109604945,0.00016187652,0.000059324055,0.00006389467,0.000022239066,0.00015562166,0.99441123],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008241161,0.00015187073,0.000025039737,0.000033141627,0.000029614552,0.00003801559,0.00002803636,0.0000031711118,0.00052592595,0.0000010556647,0.51242834,0.48591164],"study_design_scores_gemma":[0.00046944848,0.0003167032,0.003946978,0.000049075963,0.000042610805,0.000011304681,0.0000031095954,0.000042351137,0.000252599,0.000008643499,0.9947169,0.00014026767],"about_ca_topic_score_codex":0.000024544004,"about_ca_topic_score_gemma":0.0000013686162,"teacher_disagreement_score":0.4857714,"about_ca_system_score_codex":0.00006425079,"about_ca_system_score_gemma":0.000070959904,"threshold_uncertainty_score":0.51904947},"labels":[],"label_agreement":null},{"id":"W4406418658","doi":"10.1016/s0029-7437(06)72195-4","title":"10.1016/s0029-7437(06)72195-4","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Fluconazole; Medicine; Pediatrics; Intensive care medicine; Antifungal; Dermatology","score_opus":0.00926781633090694,"score_gpt":0.21718438331432105,"score_spread":0.2079165669834141,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406418658","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014085132,0.00013343665,0.0000018094759,0.0005666002,1.3063521e-7,0.00027599375,0.000012579025,0.00014936736,0.98477495],"genre_scores_gemma":[0.0068260008,9.691174e-7,0.0001554588,0.00017275746,0.0001814061,0.000010841248,0.00002748467,0.000023923116,0.99260116],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988714,0.000028469467,0.0002139552,0.00030793782,0.00026604053,0.00031218308],"domain_scores_gemma":[0.99912703,0.000043290762,0.000020981499,0.00048070322,0.00007125824,0.00025672495],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018099089,0.00014689061,0.0002756648,0.000050712264,0.00007032985,0.000017333565,0.00011070529,0.000085943895,0.99843425],"category_scores_gemma":[0.00009678112,0.00012716079,0.00011213392,0.00020634774,0.000058387075,0.00006370553,0.0000223935,0.00015692333,0.9966083],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004248519,0.000114022594,0.00002082597,0.000024418614,0.000021678605,0.000018088465,0.00001956956,0.0000021571686,0.00035688526,8.637294e-7,0.9092558,0.08974082],"study_design_scores_gemma":[0.00044151937,0.00026293175,0.0035056008,0.000049693666,0.000041579136,0.000011142542,0.0000031925151,0.000043676002,0.00023342675,0.000008273047,0.9952591,0.00013988513],"about_ca_topic_score_codex":0.000019188208,"about_ca_topic_score_gemma":7.0436016e-7,"teacher_disagreement_score":0.08960093,"about_ca_system_score_codex":0.000060491675,"about_ca_system_score_gemma":0.00006747333,"threshold_uncertainty_score":0.51854664},"labels":[],"label_agreement":null},{"id":"W4406451345","doi":"10.1016/s1166-8598(23)92275-1","title":"10.1016/s1166-8598(23)92275-1","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Environmental science","score_opus":0.0075994094375143074,"score_gpt":0.20738013417390075,"score_spread":0.19978072473638644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406451345","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01492869,0.00015189833,0.0000014951821,0.000616234,0.0000014725179,0.00027966316,0.000013860238,0.00013229092,0.9838744],"genre_scores_gemma":[0.007357321,0.0000010534559,0.00014130425,0.0001900867,0.00018059723,0.000011000442,0.00002935085,0.000024056686,0.99206525],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988583,0.000029059387,0.00021579968,0.0003088462,0.00027297626,0.00031505682],"domain_scores_gemma":[0.9991109,0.000044928358,0.000021149706,0.00048049423,0.000073651434,0.00026890275],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00017801963,0.0001487827,0.00027791318,0.000056911053,0.00007023106,0.000017324011,0.0001124841,0.00008557968,0.9975582],"category_scores_gemma":[0.00010115767,0.0001283671,0.000111990485,0.00022674404,0.000059779995,0.00006265035,0.000022535138,0.00015432354,0.99565524],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008485237,0.00016762377,0.000024803136,0.000036447735,0.000031924006,0.000039919934,0.00002745509,0.000003994365,0.0005256212,0.0000012976042,0.53474164,0.46355075],"study_design_scores_gemma":[0.00044781357,0.00030497447,0.0036993271,0.000050191506,0.000043675227,0.000010700577,0.0000030579693,0.000044443943,0.00024317374,0.0000076995,0.9950033,0.00014168398],"about_ca_topic_score_codex":0.000019399737,"about_ca_topic_score_gemma":8.6081917e-7,"teacher_disagreement_score":0.46340907,"about_ca_system_score_codex":0.000060818467,"about_ca_system_score_gemma":0.000070801514,"threshold_uncertainty_score":0.5234658},"labels":[],"label_agreement":null},{"id":"W4406452125","doi":"10.1016/s1166-8598(14)64866-3","title":"10.1016/s1166-8598(14)64866-3","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Environmental science","score_opus":0.007446177424243156,"score_gpt":0.20683409662990607,"score_spread":0.1993879192056629,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406452125","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013129401,0.0001410051,0.0000015611788,0.00060732174,0.0000015645375,0.00027967655,0.0000121644025,0.00013288441,0.9856944],"genre_scores_gemma":[0.0066376454,0.0000010245294,0.00015170939,0.0001906155,0.00017480622,0.000011020492,0.000022130753,0.000024294475,0.99278677],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99884534,0.000029657871,0.00021718506,0.00031126436,0.00027937404,0.00031716505],"domain_scores_gemma":[0.9991111,0.00004408424,0.000021245814,0.0004843891,0.00008055736,0.00025863008],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018614967,0.00014919355,0.0002804157,0.000052292355,0.00007109631,0.000017245675,0.00011248251,0.00008985612,0.99789965],"category_scores_gemma":[0.000107574124,0.00012906405,0.000112252645,0.0002072193,0.000060119102,0.00006304831,0.000022504246,0.00016389161,0.99433327],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078064774,0.00014973652,0.000017630815,0.00003204589,0.00002789598,0.000036055208,0.00002541865,0.0000032666057,0.0004408391,0.0000012651828,0.46882337,0.52966183],"study_design_scores_gemma":[0.0004814385,0.00029875513,0.002906582,0.00005014271,0.00004266668,0.00001134494,0.0000029045432,0.000041748306,0.00024574943,0.000008299788,0.9957679,0.00014249363],"about_ca_topic_score_codex":0.00002029075,"about_ca_topic_score_gemma":8.7668866e-7,"teacher_disagreement_score":0.5295193,"about_ca_system_score_codex":0.000061361694,"about_ca_system_score_gemma":0.000071711416,"threshold_uncertainty_score":0.5263079},"labels":[],"label_agreement":null},{"id":"W4406470358","doi":"10.1016/s2211-9698(16)69635-8","title":"10.1016/s2211-9698(16)69635-8","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Microbiology; Biology","score_opus":0.007470265687635668,"score_gpt":0.20682306144608098,"score_spread":0.1993527957584453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406470358","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013050494,0.00014225609,0.0000021795827,0.00056898745,0.0000014660671,0.00027371032,0.000012021996,0.00012838266,0.98582053],"genre_scores_gemma":[0.011377981,9.6391e-7,0.00010771525,0.00019132321,0.00017941797,0.0000107118985,0.000024508035,0.000023819804,0.98808354],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99887264,0.000029288527,0.00021426752,0.00030411675,0.00026694083,0.00031274083],"domain_scores_gemma":[0.9991343,0.000040637642,0.000021143784,0.00047682892,0.000069890266,0.0002571741],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018159511,0.00014722413,0.00027630947,0.000050979394,0.00007036512,0.000017201064,0.00010980387,0.00008622612,0.9985507],"category_scores_gemma":[0.000093879724,0.00012701367,0.000113042894,0.00020391619,0.00005775787,0.00006337731,0.000021880996,0.00015597249,0.99427354],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006169809,0.00013275763,0.000018658588,0.00002866566,0.000026566233,0.000024278395,0.000018420233,0.0000019939416,0.00032904837,0.000001373772,0.44441777,0.5543835],"study_design_scores_gemma":[0.00045156226,0.00029619038,0.002322819,0.00004919112,0.00004377392,0.000011150318,0.0000034777288,0.000028645798,0.00028049215,0.00001040719,0.9963622,0.00014006204],"about_ca_topic_score_codex":0.000030551342,"about_ca_topic_score_gemma":0.0000013855101,"teacher_disagreement_score":0.55424345,"about_ca_system_score_codex":0.00008890162,"about_ca_system_score_gemma":0.00006918718,"threshold_uncertainty_score":0.5179467},"labels":[],"label_agreement":null},{"id":"W4406508511","doi":"10.1016/s0246-0319(19)30052-4","title":"10.1016/s0246-0319(19)30052-4","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Dermatology","score_opus":0.009801743631253372,"score_gpt":0.21978873433135232,"score_spread":0.20998699070009894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406508511","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0032553955,0.00015949218,0.0000018840269,0.0007834111,0.0000012967706,0.0002844499,0.000012542523,0.00013736465,0.9953642],"genre_scores_gemma":[0.006047213,0.0000011076628,0.0001454231,0.00023241703,0.00017411538,0.0000110065175,0.000022810733,0.000023453907,0.99334246],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99884236,0.000032612596,0.00021242241,0.0003098283,0.00028257814,0.00032018314],"domain_scores_gemma":[0.99905425,0.00005039559,0.000020317313,0.0004758876,0.00006665796,0.0003325067],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00021958305,0.00014517798,0.0002692157,0.000053879787,0.00007878375,0.00001802788,0.000112453585,0.00008560504,0.9983737],"category_scores_gemma":[0.0001479512,0.00012485334,0.00010924809,0.00021001461,0.00006190442,0.00006182945,0.000022584241,0.0001683636,0.9950213],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005401206,0.00010526934,0.000015636866,0.000027121489,0.000020340101,0.000028760582,0.000021016624,0.0000025644254,0.00033507906,2.2701121e-7,0.8870744,0.11182946],"study_design_scores_gemma":[0.00046570084,0.00027674218,0.0022969116,0.000045296823,0.000040228722,0.000012660485,0.0000038738426,0.000039097475,0.0001943299,0.000010896186,0.9964765,0.0001377889],"about_ca_topic_score_codex":0.000030391288,"about_ca_topic_score_gemma":9.705818e-7,"teacher_disagreement_score":0.111691676,"about_ca_system_score_codex":0.00007513641,"about_ca_system_score_gemma":0.000089262605,"threshold_uncertainty_score":0.5091371},"labels":[],"label_agreement":null},{"id":"W4406517115","doi":"10.1016/s0029-7437(11)70292-0","title":"10.1016/s0029-7437(11)70292-0","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Fluconazole; Medicine; Antifungal; Dermatology","score_opus":0.00911734319177638,"score_gpt":0.21673941550861892,"score_spread":0.20762207231684254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406517115","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01900225,0.00011227538,0.0000018022166,0.00063298555,3.011766e-7,0.000279621,0.000012080223,0.00015398968,0.9798047],"genre_scores_gemma":[0.0063051917,8.0103655e-7,0.00018005354,0.00016083439,0.00018152963,0.000011251606,0.000020729804,0.000024561343,0.99311507],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988487,0.000031455635,0.00021826639,0.00031177275,0.0002724483,0.0003173712],"domain_scores_gemma":[0.9991067,0.00005167196,0.000021365551,0.0004912104,0.00007077107,0.000258252],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00019592792,0.00015006895,0.0002790181,0.00005119506,0.00007210101,0.00001813616,0.00011440706,0.00008801316,0.9987228],"category_scores_gemma":[0.00010860941,0.00012983603,0.000111927264,0.00019679636,0.000061973915,0.00006372697,0.000023159391,0.00013744966,0.99476486],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004979986,0.00012952682,0.000034875826,0.000027831253,0.000019423296,0.000023082408,0.000020908956,0.0000025927718,0.00032606747,0.0000011562026,0.864839,0.1340775],"study_design_scores_gemma":[0.00045161138,0.00025783145,0.0034962818,0.00004991271,0.000042161944,0.000011759547,0.0000032312364,0.000048355087,0.00025236938,0.0000076156607,0.9952361,0.00014276478],"about_ca_topic_score_codex":0.000028685063,"about_ca_topic_score_gemma":0.0000016100302,"teacher_disagreement_score":0.13393474,"about_ca_system_score_codex":0.000061027276,"about_ca_system_score_gemma":0.00006696259,"threshold_uncertainty_score":0.52945596},"labels":[],"label_agreement":null},{"id":"W4406526780","doi":"10.1016/s0000-0000(10)53928-7","title":"10.1016/s0000-0000(10)53928-7","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Microbiology; Aspergillus; Medicine; Biology","score_opus":0.007739928824829043,"score_gpt":0.20697671973009626,"score_spread":0.19923679090526722,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406526780","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01062133,0.00015508823,0.0000011531264,0.0007177933,0.000001338132,0.0003081257,0.00001762249,0.00015391462,0.98802364],"genre_scores_gemma":[0.0048595206,0.0000010848071,0.00013272764,0.0001622928,0.0002118244,0.00001375491,0.000031286443,0.000029693232,0.9945578],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99866825,0.000036738922,0.00025459408,0.0003603482,0.00031389834,0.00036616842],"domain_scores_gemma":[0.9989769,0.00005233563,0.000025327281,0.0005591283,0.000086914544,0.00029942294],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00020819478,0.00017745778,0.0003230694,0.00005957168,0.00008626372,0.000022473982,0.0001342212,0.00010370164,0.99935406],"category_scores_gemma":[0.00010649046,0.00015417095,0.00012982382,0.00022980441,0.000071903785,0.000072779265,0.000026124397,0.00016779419,0.99666],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090040156,0.00014896791,0.0000098034925,0.00002892458,0.000027768805,0.000034250395,0.00001929648,0.0000035989065,0.00035589785,8.0097067e-7,0.51726186,0.4812084],"study_design_scores_gemma":[0.0005435339,0.00037860865,0.0022261129,0.000054967983,0.000051395768,0.000012880456,0.0000031578775,0.000055488825,0.00029483542,0.000008375361,0.9962015,0.00016914356],"about_ca_topic_score_codex":0.000024898181,"about_ca_topic_score_gemma":8.9291035e-7,"teacher_disagreement_score":0.4810393,"about_ca_system_score_codex":0.000075121745,"about_ca_system_score_gemma":0.000086227585,"threshold_uncertainty_score":0.6286909},"labels":[],"label_agreement":null},{"id":"W4406546535","doi":"10.21203/rs.3.rs-5802877/v1","title":"A microbial natural product fractionation library screen with HRMS/MS dereplication identifies new lipopeptaibiotics against Candida auris","year":2025,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McMaster University","funders":"Canadian Institutes of Health Research; National Institutes of Health; University of Toronto; McMaster University; Canadian Institute for Advanced Research","keywords":"Natural product; Candida auris; Chemistry; Biology; Antifungal; Microbiology; Stereochemistry","score_opus":0.03647488664147605,"score_gpt":0.3677403361029283,"score_spread":0.3312654494614522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406546535","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9473485,0.007942234,0.00076361635,0.022214158,0.00074836594,0.006940005,0.00048058573,0.0004928311,0.013069744],"genre_scores_gemma":[0.9159864,0.0010736663,0.0018487984,0.00021423005,0.0012526924,0.000064826585,0.003276613,0.000053256947,0.0762295],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9959602,0.0003073999,0.00048837217,0.00125624,0.0014063665,0.00058145105],"domain_scores_gemma":[0.9966711,0.00022956941,0.00018054406,0.0014854261,0.001155803,0.00027760642],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0007467347,0.0003504938,0.0005234304,0.000627583,0.0003670651,0.00032202443,0.00040078786,0.00037445006,0.00020495469],"category_scores_gemma":[0.0008312043,0.00028863858,0.00020507806,0.00087870273,0.00027377572,0.00038110893,0.0006356545,0.002519339,0.000054855293],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009647286,0.0015329643,0.34499392,0.01948876,0.0015958318,0.0003296685,0.0023565749,0.00026051936,0.0255876,0.0006857169,0.49932232,0.09419884],"study_design_scores_gemma":[0.0040493244,0.00081496086,0.79003465,0.015888067,0.0005186814,0.000044269425,0.0017773942,0.0020946446,0.10132767,0.0030315963,0.078866266,0.0015524428],"about_ca_topic_score_codex":0.0029385318,"about_ca_topic_score_gemma":0.0023277146,"teacher_disagreement_score":0.44504076,"about_ca_system_score_codex":0.00053840334,"about_ca_system_score_gemma":0.004822169,"threshold_uncertainty_score":0.99995655},"labels":[],"label_agreement":null},{"id":"W4406563657","doi":"10.1016/j.abdp.2021.11.020","title":"10.1016/j.abdp.2021.11.020","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Computer science","score_opus":0.007267679637104054,"score_gpt":0.20705302557924302,"score_spread":0.19978534594213895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406563657","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018086134,0.00010303291,0.0000015660356,0.00077420764,0.00000119881,0.00024668797,0.00001185764,0.00008023748,0.98069507],"genre_scores_gemma":[0.0075407266,8.6795e-7,0.00013463112,0.0001505924,0.00021018455,0.000008963016,0.000023661414,0.000020950765,0.99190944],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99896395,0.000027533468,0.0001952928,0.0002880919,0.00024532646,0.00027978537],"domain_scores_gemma":[0.99920005,0.00003997325,0.000018588311,0.00043419452,0.000066298206,0.00024089101],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001527466,0.00013348351,0.00025757315,0.000043371172,0.00006204415,0.000015945716,0.00009875322,0.000076683726,0.9992518],"category_scores_gemma":[0.00009568993,0.000114396986,0.00010179427,0.00020996775,0.000051305098,0.000050898714,0.000021132833,0.00012420301,0.99552554],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060234993,0.00014512394,0.00004018302,0.000028777396,0.000024199013,0.000044072647,0.000025139936,0.0000032567336,0.00052050943,0.0000013203492,0.4680517,0.53051335],"study_design_scores_gemma":[0.00041006217,0.000244849,0.0017998544,0.000045903194,0.000039987928,0.00000852385,0.0000034245534,0.00004899073,0.0002551987,0.000005325428,0.9970113,0.00012658062],"about_ca_topic_score_codex":0.000027999859,"about_ca_topic_score_gemma":0.0000018951233,"teacher_disagreement_score":0.5303868,"about_ca_system_score_codex":0.000054056905,"about_ca_system_score_gemma":0.00007045255,"threshold_uncertainty_score":0.46649736},"labels":[],"label_agreement":null},{"id":"W4406572521","doi":"10.1016/s2211-9698(11)56775-5","title":"10.1016/s2211-9698(11)56775-5","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Traditional medicine; Chromatography; Chemistry; Medicine","score_opus":0.007439086796245384,"score_gpt":0.20684759089359034,"score_spread":0.19940850409734495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406572521","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02260442,0.00011148482,0.0000015975326,0.00066904316,0.0000014770271,0.0002721444,0.000012786841,0.00012945688,0.9761976],"genre_scores_gemma":[0.008847664,7.7680636e-7,0.0001448619,0.00018041699,0.0001813397,0.000010619658,0.000021477108,0.000023899045,0.99058896],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988671,0.000029082685,0.00021452598,0.0003055565,0.0002687554,0.0003149759],"domain_scores_gemma":[0.99912864,0.000040925748,0.000020956953,0.00048096504,0.00007011105,0.00025842444],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000179543,0.00014741407,0.00027645144,0.00005099669,0.00007045005,0.000017353135,0.00011132973,0.00008644862,0.9981106],"category_scores_gemma":[0.00009206476,0.00012719187,0.00011134553,0.00020182868,0.000058439753,0.00006411091,0.000022178754,0.00013494403,0.993219],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006107414,0.00016584717,0.00004467653,0.000035345412,0.000026545464,0.000040339124,0.000027487968,0.0000032639925,0.0004935526,0.0000017982985,0.5354705,0.4630799],"study_design_scores_gemma":[0.00044751438,0.0002501054,0.0038335894,0.000047440226,0.000043387543,0.0000109225375,0.0000034892266,0.00004595465,0.00025583713,0.0000066038515,0.994915,0.0001401259],"about_ca_topic_score_codex":0.000033401153,"about_ca_topic_score_gemma":0.000002029524,"teacher_disagreement_score":0.46293977,"about_ca_system_score_codex":0.00006070111,"about_ca_system_score_gemma":0.00006982824,"threshold_uncertainty_score":0.5186734},"labels":[],"label_agreement":null},{"id":"W4406639224","doi":"10.1016/b978-1-4160-2450-7.50232-2","title":"10.1016/b978-1-4160-2450-7.50232-2","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Antifungal; Medicine; Dermatology","score_opus":0.012562458615872704,"score_gpt":0.20783163600930607,"score_spread":0.19526917739343336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406639224","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000008290758,0.0007227513,0.0000010619246,0.00028951478,0.0000049654427,0.0006905037,0.00012475475,0.00020323847,0.9979549],"genre_scores_gemma":[0.000023680044,0.000004962248,0.000079383266,0.00018604171,0.0005767477,0.000013218687,0.00022621908,0.00013433864,0.9987554],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99770534,0.000018446375,0.0005097051,0.00072644494,0.00059095025,0.0004491198],"domain_scores_gemma":[0.99818355,0.00008258454,0.00011311423,0.0010414056,0.00014528517,0.00043405397],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00021356551,0.00051989895,0.00091064424,0.00019658222,0.00009130402,0.000030111709,0.00023706867,0.0005443198,0.99835503],"category_scores_gemma":[0.00007596062,0.00048006774,0.00040399036,0.000060579165,0.0001532865,0.00005641228,0.00007948871,0.0006393053,0.99592763],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00091653364,0.00006217581,4.295025e-7,0.00011891626,0.00014288652,0.00016790646,0.000012251142,7.4674176e-7,0.000037130183,0.000071039685,0.6810337,0.31743634],"study_design_scores_gemma":[0.000443425,0.00045922725,0.000047177964,0.00048375988,0.0002637995,0.000027029131,6.8923674e-7,0.0000047423428,0.000023279104,0.00023246778,0.997557,0.00045739493],"about_ca_topic_score_codex":0.000014516751,"about_ca_topic_score_gemma":0.0000019706536,"teacher_disagreement_score":0.31697893,"about_ca_system_score_codex":0.00019167809,"about_ca_system_score_gemma":0.00024221382,"threshold_uncertainty_score":0.9997651},"labels":[],"label_agreement":null},{"id":"W4406639239","doi":"10.1016/b978-1-4160-2450-7.50236-x","title":"10.1016/b978-1-4160-2450-7.50236-x","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Aspergillus; Microbiology; Biology","score_opus":0.012228255733642548,"score_gpt":0.20752175043885393,"score_spread":0.19529349470521137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406639239","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000009139799,0.00070932053,0.0000010401064,0.00029601925,0.000004980681,0.0006905588,0.00012024502,0.00020306869,0.99796563],"genre_scores_gemma":[0.000024136345,0.000004814173,0.00007921152,0.00018723587,0.00057800295,0.0000134487755,0.00022632926,0.00013452313,0.9987523],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977017,0.000018820961,0.00050792086,0.00072965596,0.00059216673,0.00044974237],"domain_scores_gemma":[0.99814856,0.00008388786,0.00011275374,0.0010481377,0.0001691587,0.00043747874],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00021576225,0.0005203962,0.00091175333,0.00019910588,0.00009068037,0.000030329431,0.0002382598,0.00054547586,0.99850273],"category_scores_gemma":[0.0000784245,0.00048056734,0.0004042785,0.000060685772,0.00015354273,0.00005661621,0.00007863132,0.0006468323,0.99629295],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00092658,0.00006150635,4.3359867e-7,0.000119569864,0.00014352966,0.00016785422,0.000012411123,8.2096597e-7,0.00003569753,0.00007159599,0.6705623,0.32789767],"study_design_scores_gemma":[0.00044630494,0.00045939576,0.00005018512,0.00047656344,0.00026422212,0.000027030219,7.2109054e-7,0.0000048029424,0.000022201932,0.00023387511,0.99755675,0.0004579667],"about_ca_topic_score_codex":0.000014343622,"about_ca_topic_score_gemma":0.0000019056258,"teacher_disagreement_score":0.32743973,"about_ca_system_score_codex":0.00018921375,"about_ca_system_score_gemma":0.0002394672,"threshold_uncertainty_score":0.9997646},"labels":[],"label_agreement":null},{"id":"W4406639250","doi":"10.1016/b978-1-4160-2450-7.50242-5","title":"10.1016/b978-1-4160-2450-7.50242-5","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Zygomycosis; Mucormycosis; Medicine; Dermatology; Pathology; Amphotericin B; Antifungal","score_opus":0.011970414916671005,"score_gpt":0.2071859200741475,"score_spread":0.1952155051574765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406639250","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000008991504,0.00074887543,0.0000010175705,0.00030192675,0.000004926906,0.0006838678,0.00012316815,0.00020195472,0.9979253],"genre_scores_gemma":[0.000025169335,0.0000049144405,0.00008121825,0.00019751184,0.00058027933,0.000013089713,0.00021889096,0.00013626776,0.99874264],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99770993,0.000018397539,0.0005077625,0.00073080935,0.0005886434,0.0004444361],"domain_scores_gemma":[0.9981698,0.000081252496,0.000111294394,0.0010324941,0.00016489031,0.00044029442],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00020785877,0.0005210667,0.0009122236,0.0001956178,0.00008824195,0.00003081845,0.00023636769,0.0005423702,0.99840564],"category_scores_gemma":[0.0000740448,0.00048001934,0.00040506868,0.000059323873,0.00014949677,0.00005547937,0.000080298676,0.0006492603,0.9961666],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009272866,0.00006169288,4.399864e-7,0.00012412806,0.00014349665,0.00016448749,0.000012572633,7.438242e-7,0.000036604608,0.00007309284,0.69451493,0.30394053],"study_design_scores_gemma":[0.00043663871,0.0004726615,0.000046201414,0.0004712785,0.0002724238,0.000027188393,6.9000566e-7,0.0000051897714,0.000025020678,0.00023273387,0.99755293,0.00045701963],"about_ca_topic_score_codex":0.000013912334,"about_ca_topic_score_gemma":0.0000017395748,"teacher_disagreement_score":0.30348352,"about_ca_system_score_codex":0.00019183193,"about_ca_system_score_gemma":0.00023689897,"threshold_uncertainty_score":0.99976516},"labels":[],"label_agreement":null},{"id":"W4406643078","doi":"10.1016/b978-2-294-76306-9.50443-9","title":"10.1016/b978-2-294-76306-9.50443-9","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Environmental science","score_opus":0.01201170499191699,"score_gpt":0.20703220151953225,"score_spread":0.19502049652761527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406643078","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000010461061,0.00067333656,0.0000010640676,0.00035195722,0.0000050148024,0.0006978771,0.0001303462,0.00019889136,0.99793106],"genre_scores_gemma":[0.0000253798,0.000004701902,0.0000839047,0.00019395366,0.0006638612,0.000013497069,0.00023404858,0.00013455153,0.9986461],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976831,0.00001834711,0.0005111443,0.0007346912,0.0005997404,0.00045297257],"domain_scores_gemma":[0.9981412,0.00007939407,0.00011360816,0.0010553868,0.00016720447,0.00044316382],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00020860138,0.0005259003,0.00092613715,0.0001998657,0.00009202818,0.00003061485,0.00024026676,0.00054051896,0.9983416],"category_scores_gemma":[0.000072113544,0.0004837784,0.00040547163,0.000060063012,0.00015137067,0.00005656081,0.00008053614,0.0006390172,0.996248],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010318197,0.00007133222,5.652363e-7,0.00013197259,0.00016082823,0.00018992767,0.000013110596,8.154651e-7,0.000042335534,0.00007812741,0.46523052,0.5330486],"study_design_scores_gemma":[0.00046285312,0.00046059242,0.000052149822,0.00047524512,0.0002651391,0.000028154747,7.088449e-7,0.0000046267887,0.000022297501,0.00022436114,0.99754053,0.00046334855],"about_ca_topic_score_codex":0.000015264553,"about_ca_topic_score_gemma":0.0000016690149,"teacher_disagreement_score":0.5325853,"about_ca_system_score_codex":0.00019062973,"about_ca_system_score_gemma":0.0002455447,"threshold_uncertainty_score":0.9997614},"labels":[],"label_agreement":null},{"id":"W4406643296","doi":"10.1016/b978-2-294-76306-9.50116-2","title":"10.1016/b978-2-294-76306-9.50116-2","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Geography","score_opus":0.012358412045071782,"score_gpt":0.20700977993878042,"score_spread":0.19465136789370863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406643296","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000011128353,0.00066865527,0.0000011272766,0.0002941418,0.000004921046,0.0007044709,0.00012548728,0.00019853926,0.9979915],"genre_scores_gemma":[0.000023764593,0.0000045526294,0.00009043427,0.00019321206,0.0006565078,0.000013694895,0.0002286247,0.000135416,0.99865377],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99769825,0.000018150164,0.00050966267,0.0007312709,0.0005920948,0.000450597],"domain_scores_gemma":[0.9981532,0.00007832211,0.00011331696,0.0010507746,0.00016588498,0.00043847784],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00020325805,0.0005243368,0.0009214949,0.00018691758,0.00009111529,0.00002978756,0.00024161892,0.0005345532,0.9984857],"category_scores_gemma":[0.00006953276,0.00048262338,0.000403801,0.000058431026,0.0001509726,0.000056251567,0.000080075435,0.0006237549,0.9963561],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013262412,0.00007192276,5.646193e-7,0.00013032398,0.00016170651,0.00018463614,0.000014150165,6.2121813e-7,0.000037470756,0.00007476614,0.4635561,0.5344415],"study_design_scores_gemma":[0.00045541517,0.0005578156,0.00004196758,0.00046794483,0.00026562114,0.000026809716,7.608116e-7,0.0000047148515,0.000021193646,0.00024162908,0.99745345,0.00046265725],"about_ca_topic_score_codex":0.000015921674,"about_ca_topic_score_gemma":0.0000017943131,"teacher_disagreement_score":0.5339788,"about_ca_system_score_codex":0.00018891571,"about_ca_system_score_gemma":0.00024176096,"threshold_uncertainty_score":0.99976254},"labels":[],"label_agreement":null},{"id":"W4406645594","doi":"10.1016/b978-84-8086-959-1.00229-7","title":"10.1016/b978-84-8086-959-1.00229-7","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Aspergillus; Biology; Microbiology","score_opus":0.01204760707148988,"score_gpt":0.2063760836081616,"score_spread":0.1943284765366717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406645594","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000012191783,0.0008048918,0.0000011426638,0.00033671866,0.0000053933527,0.0007218798,0.00014231299,0.00020633148,0.9977691],"genre_scores_gemma":[0.000029995614,0.000005754792,0.00008401139,0.00020766814,0.0006176081,0.000014820455,0.00024796318,0.000137114,0.9986551],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975627,0.000020026077,0.0005390591,0.000767007,0.0006352316,0.0004759815],"domain_scores_gemma":[0.9980528,0.00008504973,0.0001224743,0.001107312,0.00017665981,0.00045575196],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00022229532,0.00054791366,0.0009533502,0.0002066186,0.00010093939,0.000033252818,0.00025756468,0.00055408216,0.9983066],"category_scores_gemma":[0.000078083416,0.00050507183,0.00041797728,0.00006477009,0.0001611201,0.00005967397,0.00008691274,0.0006793635,0.99514157],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001089982,0.0000784766,6.434254e-7,0.00014251123,0.00017203882,0.00018987567,0.000015840591,9.658796e-7,0.000046808036,0.00008223925,0.49253845,0.5056422],"study_design_scores_gemma":[0.0004764,0.00047098732,0.000059449638,0.00047375922,0.00027999195,0.000027224016,8.4822705e-7,0.0000057587185,0.000023617175,0.00021824814,0.99747884,0.00048486557],"about_ca_topic_score_codex":0.000017693077,"about_ca_topic_score_gemma":0.0000019600916,"teacher_disagreement_score":0.5051573,"about_ca_system_score_codex":0.00020215749,"about_ca_system_score_gemma":0.00024500463,"threshold_uncertainty_score":0.99974006},"labels":[],"label_agreement":null},{"id":"W4406688221","doi":"10.1128/jcm.01129-24","title":"Anidulafungin is a useful surrogate marker for predicting <i>in vitro</i> susceptibility to rezafungin among five <i>Candida</i> species using CLSI methods and interpretive criteria","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Genentech; U.S. Food and Drug Administration; National Institutes of Health; Astellas Pharma; Basilea Pharmaceutica; Ohio State University; Nabriva Therapeutics; Pfizer; Melinta Therapeutics; Entasis Therapeutics; Wockhardt; Mundipharma International; Zoetis; Menarini Group; McGill University; Roche; Cidara Therapeutics; Medpace; Carnegie Mellon University; TenNor Therapeutics; Harvard University; Meiji Seika Pharma; Shionogi; National Cancer Institute; Gilead Sciences; GlaxoSmithKline; Dr. Falk Pharma","keywords":"Anidulafungin; Micafungin; Caspofungin; Candida dubliniensis; Candida parapsilosis; Candida krusei; Candida glabrata; Candida tropicalis; Broth microdilution; Biology; Candida albicans; Microbiology; Echinocandin; Echinocandins; Fluconazole; Corpus albicans; Antifungal; Minimum inhibitory concentration; Antimicrobial","score_opus":0.043537444570821635,"score_gpt":0.4453509296125755,"score_spread":0.40181348504175385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406688221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98386353,0.00061035197,0.012259958,0.0013466766,0.0009154369,0.00067064393,0.00014132215,0.00001176983,0.00018031166],"genre_scores_gemma":[0.9544538,0.00012907694,0.042024516,0.0026064191,0.00023001306,0.000004815269,0.0000061770907,0.00001817516,0.00052695215],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9956552,0.0009731373,0.0022597604,0.0005813067,0.000072945695,0.00045764228],"domain_scores_gemma":[0.99387145,0.0043491134,0.00061188225,0.0003426688,0.0005892081,0.00023569228],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0068343515,0.00026363347,0.0016592079,0.00026176442,0.00007449405,0.00003238269,0.00019737199,0.000400328,0.000071640614],"category_scores_gemma":[0.009197136,0.00021028763,0.0005399942,0.00030751203,0.00048779204,0.00013493931,0.00017883764,0.00078725343,0.0000011139518],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009410553,0.00017418829,0.5741316,0.00014784497,0.00017710828,0.000019484665,0.0003848616,0.0000016736226,0.4126431,0.000007331348,0.00107194,0.0018303068],"study_design_scores_gemma":[0.004488687,0.0019075256,0.93081176,0.001915064,0.0004843585,0.00011736474,0.0016250272,0.0009212592,0.050315496,0.0005824499,0.0065175258,0.00031345538],"about_ca_topic_score_codex":0.00004418877,"about_ca_topic_score_gemma":0.00015430363,"teacher_disagreement_score":0.3623276,"about_ca_system_score_codex":0.00018651015,"about_ca_system_score_gemma":0.00036027736,"threshold_uncertainty_score":0.99914885},"labels":[],"label_agreement":null},{"id":"W4406723086","doi":"10.1142/s1088424625500130","title":"Effect of porphyrin metalation and synergistic combination with fluconazole in antifungal PDT against <i>Candida spp</i>","year":2025,"lang":"en","type":"article","venue":"Journal of Porphyrins and Phthalocyanines","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Rhodes University; International Development Research Centre","keywords":"Fluconazole; Chemistry; Porphyrin; Antifungal; Metalation; Photodynamic therapy; Microbiology; Stereochemistry; Photochemistry; Organic chemistry; Biology","score_opus":0.0038565059214665685,"score_gpt":0.26030864446323804,"score_spread":0.25645213854177146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406723086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99617034,0.0013944656,0.00019838501,0.00016498809,0.00008004519,0.00020432111,0.00000584329,0.0000047730105,0.001776815],"genre_scores_gemma":[0.9992379,0.0002631843,0.00015966366,0.00004257246,0.000037138852,0.0000017803408,0.0000068905115,0.000008378362,0.00024248187],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989134,0.00008722974,0.00048564328,0.00015346904,0.00023092814,0.00012932857],"domain_scores_gemma":[0.9991195,0.00020045112,0.00029064892,0.000116965646,0.00019714398,0.00007526033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006964185,0.00015338145,0.00057657296,0.00027442994,0.000041812113,0.000018007937,0.000045034252,0.00006899777,0.000014542568],"category_scores_gemma":[0.00014618716,0.0001028175,0.000072236595,0.00028362215,0.00012817695,0.00015811391,0.000021646883,0.0001932933,3.2315353e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002154353,0.00018876526,0.93350315,0.0007355451,0.000111958885,0.00014289665,0.0000650629,0.000017618979,0.058064636,0.0005679816,0.00009042827,0.004357594],"study_design_scores_gemma":[0.0049110274,0.0021213724,0.96010953,0.00095947395,0.00026277034,0.0001296817,0.00010586338,0.0003137741,0.030721344,0.00014587297,0.00011329435,0.000105971565],"about_ca_topic_score_codex":0.000042298456,"about_ca_topic_score_gemma":0.000033979843,"teacher_disagreement_score":0.02734329,"about_ca_system_score_codex":0.000031821146,"about_ca_system_score_gemma":0.00009560186,"threshold_uncertainty_score":0.4192776},"labels":[],"label_agreement":null},{"id":"W4406734378","doi":"10.1016/b978-1-4377-0762-5.00024-3","title":"10.1016/b978-1-4377-0762-5.00024-3","year":2000,"lang":"en","type":"book-chapter","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Zygomycosis; Medicine; Dermatology","score_opus":0.011905228579308537,"score_gpt":0.20646363941458393,"score_spread":0.1945584108352754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406734378","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000012739174,0.00089912926,8.970579e-7,0.00029937664,0.0000049450273,0.0006942447,0.00012389905,0.00020448142,0.9977603],"genre_scores_gemma":[0.00003091573,0.000005657781,0.000065992186,0.00018974143,0.0006001428,0.0000132872465,0.00020505954,0.00013834209,0.99875087],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99768186,0.00001793849,0.000510929,0.00073491153,0.0005983652,0.00045601474],"domain_scores_gemma":[0.9981521,0.00007968847,0.00011115215,0.0010459743,0.00016492156,0.0004461627],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00020402818,0.00052616984,0.0009103359,0.00019929938,0.000090944544,0.000031322455,0.00023961275,0.0005407564,0.9992622],"category_scores_gemma":[0.00006827855,0.00048502022,0.0004086996,0.00005808156,0.00015204588,0.000056479865,0.00008009797,0.00064244075,0.99820334],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001005181,0.00006653212,4.4839197e-7,0.0001307416,0.00015833028,0.00018216092,0.000013834231,8.106346e-7,0.000049169186,0.00007198975,0.4464401,0.5518807],"study_design_scores_gemma":[0.00044211673,0.00046625256,0.000039025505,0.00048772417,0.0002746294,0.000029129547,7.0912745e-7,0.0000039962547,0.000029329693,0.00023607965,0.9975261,0.00046491486],"about_ca_topic_score_codex":0.000010742466,"about_ca_topic_score_gemma":0.0000012001277,"teacher_disagreement_score":0.5514158,"about_ca_system_score_codex":0.00019656209,"about_ca_system_score_gemma":0.0002419375,"threshold_uncertainty_score":0.99976015},"labels":[],"label_agreement":null},{"id":"W4406759450","doi":"10.18535/ijmsci/v11i.10.05","title":"Antifungal Susceptibility of Candida Species Isolated from Urine Samples: A Laboratory-Based Analysis","year":2024,"lang":"en","type":"article","venue":"International Journal Of Medical Science And Clinical Invention","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Research Foundation","funders":"","keywords":"Medicine; Antifungal; Urine; Microbiology; Dermatology; Internal medicine; Biology","score_opus":0.05583505036040694,"score_gpt":0.4161032102082351,"score_spread":0.3602681598478282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406759450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98781395,0.0005019575,0.005905421,0.0046281004,0.00089534675,0.00006365247,0.000060419745,0.000012164258,0.00011897614],"genre_scores_gemma":[0.9981163,0.0005688301,0.00040712708,0.00043067953,0.00041571332,4.4238226e-7,0.000018635765,0.000003940828,0.00003833965],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99526966,0.0000924916,0.001205747,0.0003133294,0.0029708687,0.00014792923],"domain_scores_gemma":[0.99691474,0.00059614965,0.0003040569,0.00016533872,0.0016195945,0.00040011248],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0065191253,0.00009774066,0.0004568249,0.00037425954,0.000045804572,0.00008673077,0.00038375743,0.0001434907,0.0016592342],"category_scores_gemma":[0.0055458876,0.00006744916,0.00040354102,0.0010683107,0.0014143924,0.00026524096,0.000069344445,0.00046192002,0.000004674105],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071186805,0.00060156983,0.9765096,0.000051019637,0.00085236557,0.00021380426,0.0000647634,0.000003160133,0.007231779,0.0008175747,0.0005673423,0.012375191],"study_design_scores_gemma":[0.0011241024,0.00059058866,0.9789597,0.00067237165,0.00067220477,0.000010856425,0.00020605506,0.01380071,0.0011178034,0.0009339679,0.0018278039,0.00008385484],"about_ca_topic_score_codex":0.00022678163,"about_ca_topic_score_gemma":0.00044762038,"teacher_disagreement_score":0.01379755,"about_ca_system_score_codex":0.00013499086,"about_ca_system_score_gemma":0.0017098415,"threshold_uncertainty_score":0.9992534},"labels":[],"label_agreement":null},{"id":"W4406800591","doi":"10.1128/aac.01709-24","title":"Genomic analyses reveal high diversity and rapid evolution of <i>Pichia kudriavzevii</i> within a neonatal intensive care unit in Delhi, India","year":2025,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; McMaster University; University of Delhi; Canadian Institute for Advanced Research; International Centre for Genetic Engineering and Biotechnology; New Jersey Health Foundation","keywords":"Biology; Fluconazole; Voriconazole; Intensive care; Neonatal intensive care unit; Genome; Gene; Genetics; Microbiology; Medicine; Antifungal; Intensive care medicine","score_opus":0.02109892914772162,"score_gpt":0.2875997503744538,"score_spread":0.2665008212267322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406800591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99816793,0.00074214366,0.00007995838,0.00049278117,0.000076894794,0.00029874628,0.000038059425,0.0000119729475,0.00009150364],"genre_scores_gemma":[0.99529254,0.0009218636,0.00018861357,0.0033536148,0.000022491708,0.0000010642532,0.00003081471,0.000008386744,0.00018062777],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99911296,0.00004141108,0.0002724334,0.00031038973,0.000094891635,0.00016792279],"domain_scores_gemma":[0.9994341,0.00002319986,0.00009774839,0.00017243078,0.00021845347,0.000054049586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010314215,0.00015654125,0.00040591924,0.00015269668,0.00017059028,0.000010427981,0.00007334878,0.00011530099,0.00002339013],"category_scores_gemma":[0.000029061703,0.00013770447,0.00007034172,0.00024128797,0.00020258426,0.00006741564,0.00015437059,0.00015328624,6.7478436e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010026706,0.000044317323,0.9646001,0.00025118233,0.00012171973,0.000014980273,0.0043159663,0.0000018155112,0.02663082,0.000056955407,0.0007137353,0.0022457412],"study_design_scores_gemma":[0.0028952132,0.00011768423,0.98340756,0.00025883532,0.00010068013,0.0000051287006,0.003540781,0.00002079954,0.009227284,0.0000785459,0.00023364383,0.0001138301],"about_ca_topic_score_codex":0.0012013605,"about_ca_topic_score_gemma":0.00032503967,"teacher_disagreement_score":0.018807478,"about_ca_system_score_codex":0.00006423386,"about_ca_system_score_gemma":0.00009406149,"threshold_uncertainty_score":0.5615425},"labels":[],"label_agreement":null},{"id":"W4406945039","doi":"10.1212/wnl.0000000000210202","title":"Teaching NeuroImage: Black Turbinate Sign as an Early Clue of Rhino-Orbital-Cerebral Mucormycosis","year":2025,"lang":"en","type":"article","venue":"Neurology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Toronto","funders":"","keywords":"Sign (mathematics); Mucormycosis; Anatomy; Medicine; Pathology; Mathematics","score_opus":0.01248391478387503,"score_gpt":0.29155931721290657,"score_spread":0.27907540242903156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406945039","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9756801,0.000059551563,0.0000864318,0.0030537592,0.00025515392,0.0003147372,0.000007839142,0.000094078685,0.020448353],"genre_scores_gemma":[0.99221116,0.000010770847,0.000096056625,0.005020866,0.00006636442,0.0000059258905,0.000008819885,0.000024093823,0.0025559328],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99808437,0.00033638693,0.00042266346,0.000568261,0.0002049621,0.00038336523],"domain_scores_gemma":[0.99878204,0.00019900964,0.00010919068,0.0006682754,0.00011115816,0.00013035352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032535612,0.00020316878,0.00048858393,0.0001739882,0.000094764124,0.000014605933,0.0002130091,0.00020543628,0.00014033058],"category_scores_gemma":[0.00043580576,0.00018496368,0.00015498421,0.00019100631,0.0003121819,0.00015366483,0.0001023901,0.0008243269,0.00006871146],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0053736856,0.00090390694,0.8921966,0.00038607663,0.00007837295,0.0005531036,0.00070416444,0.000014112643,0.08446996,0.008256664,0.0015707295,0.005492622],"study_design_scores_gemma":[0.0014020837,0.0040968307,0.9868209,0.000025165122,0.00012495562,0.000039183924,0.000039997485,0.00045867875,0.003468195,0.0024104465,0.0009729858,0.00014057169],"about_ca_topic_score_codex":0.0010233134,"about_ca_topic_score_gemma":0.00011289954,"teacher_disagreement_score":0.0946243,"about_ca_system_score_codex":0.000017674549,"about_ca_system_score_gemma":0.00013361059,"threshold_uncertainty_score":0.75426},"labels":[],"label_agreement":null},{"id":"W4407239172","doi":"10.1128/spectrum.02754-24","title":"Blocking the shikimate pathway amplifies the impact of carvacrol on biofilm formation in <i>Candida albicans</i>","year":2025,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"Concordia University; Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation; University of Regina","keywords":"Biofilm; Candida albicans; Blocking (statistics); Microbiology; Shikimate pathway; Chemistry; Biology; Genetics; Biochemistry; Bacteria; Gene; Biosynthesis; Mathematics","score_opus":0.009968737311589593,"score_gpt":0.2833620678405261,"score_spread":0.2733933305289365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407239172","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99182314,0.00037820722,0.00008583847,0.0036933115,0.00008457798,0.00042949428,0.000060317885,0.000018643617,0.0034264717],"genre_scores_gemma":[0.9987218,0.000063495085,0.000009086293,0.0007518024,0.000027379068,0.000012029944,0.00003241248,0.000005950073,0.00037606497],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99904,0.0001195207,0.00031446345,0.00018897791,0.000041721683,0.00029532885],"domain_scores_gemma":[0.9992359,0.00020085808,0.00009849633,0.00041680786,0.00002993661,0.00001795263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038610896,0.00014104813,0.00029164407,0.000094265415,0.00011597393,0.000010737759,0.00016646211,0.00010513296,0.00007758981],"category_scores_gemma":[0.0000723334,0.00006714021,0.00016536866,0.00029276774,0.00028065985,0.000030966887,0.000044799086,0.00029359316,0.000012852948],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007521009,0.00011567426,0.13477267,0.000056802608,0.0000989504,0.00000850183,0.0006919846,0.000040874544,0.8588179,0.0017332211,0.002070181,0.0008411824],"study_design_scores_gemma":[0.0016545089,0.00067222613,0.51900727,0.00031066165,0.0000655274,0.000064917214,0.00121431,0.00015383014,0.47167873,0.0016600476,0.0033410788,0.0001769294],"about_ca_topic_score_codex":0.0006178814,"about_ca_topic_score_gemma":0.0013131718,"teacher_disagreement_score":0.38713914,"about_ca_system_score_codex":0.00015911624,"about_ca_system_score_gemma":0.0001202755,"threshold_uncertainty_score":0.27378982},"labels":[],"label_agreement":null},{"id":"W4407239752","doi":"10.1128/iai.00002-25","title":"<i>Candida albicans</i> enhances iron uptake to maintain fluconazole resistance","year":2025,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research; National Institutes of Health; Concordia University","keywords":"Fluconazole; Ergosterol; Candida albicans; Microbiology; Strain (injury); Corpus albicans; Biology; Minimum inhibitory concentration; Pharmacology; Biochemistry; Antifungal; Antimicrobial","score_opus":0.008128572126103075,"score_gpt":0.28826788250698354,"score_spread":0.28013931038088047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407239752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95014226,0.00042337825,0.0020892075,0.0012753377,0.00019696285,0.00027258432,0.0000061914193,0.00007287608,0.045521174],"genre_scores_gemma":[0.9827052,0.0003420664,0.0001732522,0.0019273325,0.00003565203,0.000020392541,0.000009977484,0.0000060284306,0.01478015],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999193,0.00007441185,0.00021798367,0.00021359857,0.00011197747,0.00018901286],"domain_scores_gemma":[0.9993878,0.00006450897,0.000034833796,0.00031285302,0.00009837204,0.00010163602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034855088,0.00011944378,0.00021758628,0.00009798436,0.0002611747,0.000031239764,0.000045056066,0.00007614911,0.00020636304],"category_scores_gemma":[0.00023432741,0.00010783919,0.00006076676,0.0003285154,0.00010190963,0.0000846263,0.000043687895,0.00023726338,0.000028784209],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034452535,0.00081419473,0.62130576,0.0010271077,0.00017036659,0.000018573854,0.0009446661,0.0000056678246,0.2628813,0.015767075,0.020401921,0.07321811],"study_design_scores_gemma":[0.0005654549,0.00012239718,0.82745314,0.00017087617,0.000034525197,0.0000025110432,0.00024745584,0.0000067740225,0.013006132,0.00065214693,0.15763715,0.00010145341],"about_ca_topic_score_codex":0.00067474775,"about_ca_topic_score_gemma":0.0027913286,"teacher_disagreement_score":0.24987517,"about_ca_system_score_codex":0.00010054476,"about_ca_system_score_gemma":0.00009753533,"threshold_uncertainty_score":0.43975544},"labels":[],"label_agreement":null},{"id":"W4407249462","doi":"10.1055/s-0045-1803557","title":"Invasive Rhino-Orbital Cerebral Mucormycosis, Case Report","year":2025,"lang":"en","type":"article","venue":"Journal of Neurological Surgery Part B Skull Base","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Mucormycosis; Medicine; Orbital Diseases; Dermatology; Radiology; Pathology; Computed tomography","score_opus":0.03760061445960083,"score_gpt":0.29043876618647724,"score_spread":0.2528381517268764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407249462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916928,0.00054159766,0.00006993427,0.005132427,0.001047825,0.00018538121,0.000011702647,0.000036798683,0.0012815645],"genre_scores_gemma":[0.9941698,0.00013418513,0.00016455277,0.004215096,0.00037748207,0.0000044965,0.000008002907,0.000012855798,0.00091357244],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99692094,0.0002885793,0.0014722546,0.0003961265,0.00048626558,0.0004358063],"domain_scores_gemma":[0.99611026,0.001954281,0.0006086951,0.00045338043,0.00045259786,0.00042079584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016092275,0.00025338083,0.0009863301,0.0002452312,0.00014823684,0.000038506103,0.00011678332,0.00021132204,0.00064168335],"category_scores_gemma":[0.0075310916,0.00017319404,0.0008238509,0.0004122353,0.00019993246,0.00020535741,0.000085064734,0.000859956,0.000025619236],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001489103,0.00046984848,0.50773734,0.00006306246,0.00007255953,0.452447,0.000008076334,0.000004982527,0.00056036486,0.00003377012,0.03639947,0.0007143983],"study_design_scores_gemma":[0.0014514956,0.0015275187,0.5833697,0.00031390568,0.00047228963,0.38256323,0.000112418835,0.000071520706,0.003105547,0.00050870964,0.02615846,0.00034525164],"about_ca_topic_score_codex":0.000016797265,"about_ca_topic_score_gemma":0.00002615014,"teacher_disagreement_score":0.075632304,"about_ca_system_score_codex":0.000058261543,"about_ca_system_score_gemma":0.00058039965,"threshold_uncertainty_score":0.9015964},"labels":[],"label_agreement":null},{"id":"W4407358142","doi":"10.1093/mmy/myaf015","title":"Invasive aspergillosis caused by cryptic species in transplant recipients: A review","year":2025,"lang":"en","type":"review","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Aspergillosis; Species complex; Biology; Medicine; Immunology; Zoology; Genetics","score_opus":0.03375701865844621,"score_gpt":0.3556590731273149,"score_spread":0.32190205446886866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407358142","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000048275357,0.990463,0.00001896964,0.0020658176,0.0004818756,0.0020087855,0.00012578059,0.000045493467,0.004741992],"genre_scores_gemma":[0.00009955009,0.9886738,0.000021620332,0.0044467794,0.00012822932,0.0004176885,0.0006371628,0.000032532134,0.005542609],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99532837,0.0007717979,0.0015961339,0.00088486343,0.00077430205,0.00064455526],"domain_scores_gemma":[0.99626905,0.002294785,0.000242427,0.0006649552,0.00009741012,0.0004313744],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011222684,0.00054268236,0.004895066,0.00030307,0.000050886367,0.0000065624376,0.0004448769,0.0011759844,0.007973598],"category_scores_gemma":[0.0076166606,0.0003840995,0.0007238277,0.00093223975,0.0004079749,0.000031093445,0.000096925745,0.0015563696,0.00026617962],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011539426,0.0009031013,0.0027038031,0.41008523,0.0005117234,0.002927056,0.000060334005,5.42116e-9,0.0000038876897,0.00019895169,0.17408082,0.40840968],"study_design_scores_gemma":[0.00053323567,0.00022989936,0.0007186776,0.2670176,0.0015514989,0.000049410744,0.0000069271987,2.389498e-7,7.1865867e-7,0.000015777565,0.72965604,0.00021995054],"about_ca_topic_score_codex":0.000035024936,"about_ca_topic_score_gemma":0.00033095764,"teacher_disagreement_score":0.55557525,"about_ca_system_score_codex":0.00052100734,"about_ca_system_score_gemma":0.0027529288,"threshold_uncertainty_score":0.9998611},"labels":[],"label_agreement":null},{"id":"W4407364361","doi":"10.11144/javeriana.sc30.cotn","title":"Characterization of three native Streptomyces isolates that inhibit the growth of fluconazole-resistant Candida spp strains.","year":2025,"lang":"en","type":"article","venue":"Universitas Scientiarum","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fondation Pour La Conservation Du Saumon Atlantique","keywords":"Fluconazole; Microbiology; Antifungal; Streptomyces; Biology; Bacteria; Genetics","score_opus":0.010874985807684723,"score_gpt":0.2287147146879305,"score_spread":0.21783972888024578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407364361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98887783,0.0001396438,0.0008344624,0.0009065955,0.000122064404,0.0003046806,0.00015873444,0.00001667604,0.008639295],"genre_scores_gemma":[0.99844545,0.000025919613,0.00004702859,0.00006508893,0.000009489317,6.43271e-7,0.000052266783,0.000004267793,0.0013498436],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99903965,0.000037402067,0.00020599678,0.00023984261,0.00029549695,0.00018160488],"domain_scores_gemma":[0.9991095,0.000049030587,0.0001725138,0.00027435625,0.00034684667,0.000047726706],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002571463,0.00011255211,0.00024061353,0.00020665397,0.0001611931,0.000014253107,0.00019498573,0.000060218663,0.00040258528],"category_scores_gemma":[0.00006422424,0.000081351,0.0001193881,0.0006235776,0.0005228813,0.00018859956,0.000093191185,0.00010753369,0.0000033025183],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050157856,0.00018837357,0.32012802,0.00028955124,0.00019453498,0.0000084752355,0.0009950481,0.0000017969502,0.65936625,0.017011711,0.0009990647,0.00031557473],"study_design_scores_gemma":[0.00091756723,0.00015340047,0.68176055,0.0003098281,0.00023781438,7.271718e-7,0.005471794,0.0001921649,0.30988416,0.0005727961,0.00039821668,0.00010099151],"about_ca_topic_score_codex":0.00014730477,"about_ca_topic_score_gemma":0.00030801163,"teacher_disagreement_score":0.36163253,"about_ca_system_score_codex":0.00007696854,"about_ca_system_score_gemma":0.0002710014,"threshold_uncertainty_score":0.44080266},"labels":[],"label_agreement":null},{"id":"W4407374822","doi":"10.3329/bjms.v24i10.79172","title":"Global prevalence of Candida species diversity in oral cavity of denture wearing patients- A systematic review and meta analysis","year":2025,"lang":"en","type":"review","venue":"Bangladesh Journal of Medical Science","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Meta-analysis; Oral cavity; Dentistry; Systematic review; MEDLINE; Internal medicine; Biology","score_opus":0.05387382519709415,"score_gpt":0.37045427703837147,"score_spread":0.3165804518412773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407374822","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022062398,0.9967136,0.000049292914,0.00008462125,0.00005022321,0.0007191073,0.0000793039,0.0000019566367,0.00009564781],"genre_scores_gemma":[0.032075148,0.96765625,0.00009744002,0.000063469684,0.000008943356,0.0000028807256,0.0000017697128,0.0000022815823,0.00009178799],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99447864,0.00029716987,0.001642379,0.000326327,0.003007823,0.00024762904],"domain_scores_gemma":[0.9968678,0.00033153643,0.0014845936,0.00037021431,0.00060589745,0.00034000212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006002523,0.00023297552,0.005725599,0.00038899417,0.000071701485,0.000013461808,0.0009547696,0.00018547481,0.00017109874],"category_scores_gemma":[0.0068827136,0.000133703,0.0011477268,0.003284512,0.0008915011,0.0001528043,0.00058257265,0.0004615447,2.6881733e-7],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013810482,0.00017479595,0.050397318,0.9435444,0.0035945752,0.000042614723,0.000045102952,1.3241606e-7,1.0144841e-7,0.00004635644,0.00004955551,0.0020912483],"study_design_scores_gemma":[0.00042626768,0.00019742957,0.058767185,0.4332787,0.50676787,0.000058127807,0.00006048636,0.000004790393,7.4312896e-7,0.00001624982,0.00024472366,0.00017739736],"about_ca_topic_score_codex":0.00015522084,"about_ca_topic_score_gemma":0.00024341082,"teacher_disagreement_score":0.51026565,"about_ca_system_score_codex":0.00033035275,"about_ca_system_score_gemma":0.0016747057,"threshold_uncertainty_score":0.8239748},"labels":[],"label_agreement":null},{"id":"W4407468688","doi":"10.1016/s1473-3099(24)00749-7","title":"Global guideline for the diagnosis and management of candidiasis: an initiative of the ECMM in cooperation with ISHAM and ASM","year":2025,"lang":"en","type":"review","venue":"The Lancet Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":296,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McGill University Health Centre; University Health Network","funders":"NHLBI Division of Intramural Research; Janssen Pharmaceuticals; National Institute of Allergy and Infectious Diseases; Instituto de Salud Carlos III; Sanofi Pasteur; Fondation de l'Hôpital Général de Montréal; Merck Canada; Canadian Institutes of Health Research; National Health Laboratory Service; Directorate for Biological Sciences; Medizinische Universität Graz; Universität zu Köln; University of Cape Town; Astellas Pharma; Pfizer Canada; Universiteit van Amsterdam; Pfizer Japan; Instituto de Investigación Sanitaria Gregorio Marañón; Shionogi; Tel Aviv University; Manchester Biomedical Research Centre; Association of Medical Microbiology and Infectious Disease Canada; CSL Behring; Glenmark Pharmaceuticals; National Institutes of Health; McGill University Health Centre; Mylan; Jazz Pharmaceuticals; AstraZeneca; Ludwig-Maximilians-Universität München; Cidara Therapeutics; University of Toronto; Joint Programming Initiative on Antimicrobial Resistance; Bundesministerium für Bildung und Forschung; American College of Veterinary Internal Medicine; Public Health Agency of Canada; HELIOS Kliniken; National Institute for Health and Care Research; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; Infectious Diseases Society of America; McGill University; Public Health Agency; Deutsches Zentrum für Infektionsforschung; Karl-Franzens-Universität Graz; Deutsche Forschungsgemeinschaft; Gilead Sciences; Sanofi; Dowager Countess Eleanor Peel Trust; Sunovion; National Science Foundation; Jeffrey Modell Foundation; Moderna; Pfizer","keywords":"Intensive care medicine; Fluconazole; Candida auris; Mucocutaneous zone; Guideline; Medicine; Invasive candidiasis; Antifungal; Chronic mucocutaneous candidiasis; Thrush; Dermatology; Disease; Internal medicine; Pathology","score_opus":0.05546445445693227,"score_gpt":0.38244974518476943,"score_spread":0.32698529072783716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407468688","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0067247786,0.9889063,0.000096817144,0.00034220837,0.000044835193,0.002748909,0.0007251062,0.000013688604,0.0003973594],"genre_scores_gemma":[0.10212368,0.89701235,0.000017752966,0.00026930514,0.0000628359,0.00044655876,0.000043352768,0.0000071138807,0.000017028986],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99904233,0.0001597226,0.0003499111,0.00019889661,0.00012905929,0.0001200593],"domain_scores_gemma":[0.99881333,0.00042217108,0.0002075832,0.00040360735,0.0001231606,0.000030143838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002927472,0.0001664775,0.00080001337,0.00002715838,0.00009486233,0.00001806401,0.00011353118,0.000050834955,0.0000056697236],"category_scores_gemma":[0.00021009812,0.00006796848,0.00009993249,0.00030951688,0.00022387876,0.00004593314,0.000066585235,0.000081896666,7.568885e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049666566,0.0004583202,0.3714206,0.049860295,0.0010807646,0.000005256109,0.00016292208,0.000025164967,7.3018455e-8,0.002491073,0.002905431,0.57109344],"study_design_scores_gemma":[0.0056134816,0.0013688575,0.73804885,0.06742886,0.01880113,0.000023015882,0.0011631785,0.0001068403,0.0000050735266,0.0014117758,0.16552305,0.00050586805],"about_ca_topic_score_codex":0.00021091598,"about_ca_topic_score_gemma":0.0021801197,"teacher_disagreement_score":0.5705876,"about_ca_system_score_codex":0.000062327184,"about_ca_system_score_gemma":0.00021800089,"threshold_uncertainty_score":0.2771674},"labels":[],"label_agreement":null},{"id":"W4407757790","doi":"10.1080/21501203.2025.2461725","title":"Prevalence, drug resistance and genetic diversity of <i>Candida glabrata</i> in the reproductive tract of pregnant women in Hainan and comparison with global multilocus sequence data","year":2025,"lang":"en","type":"article","venue":"Mycology&#58 An International Journal on Fungal Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Science Foundation of Hainan Province","keywords":"Candida glabrata; Genetic diversity; Drug resistance; Biology; Reproductive tract; Genetics; Diversity (politics); Resistance (ecology); Genetic variation; Evolutionary biology; Medicine; Environmental health; Gene; Candida albicans; Ecology; Population","score_opus":0.028590640207939572,"score_gpt":0.33846289072056907,"score_spread":0.3098722505126295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407757790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99670744,0.0014612827,0.000054723652,0.0009584322,0.00011260797,0.000275265,0.00018627835,0.000003170811,0.00024082165],"genre_scores_gemma":[0.9980925,0.00097466767,0.000607448,0.00020258184,0.000029746572,0.000005028983,0.000014733251,0.0000024286312,0.00007090584],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984063,0.0003226336,0.0004313897,0.00043266753,0.00019812661,0.00020890844],"domain_scores_gemma":[0.9988661,0.00026523104,0.00026148412,0.0003578795,0.00019408388,0.000055262917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010700212,0.000121551544,0.000385001,0.00014245586,0.00006874359,0.000010733566,0.00049197825,0.000082698934,0.000010578837],"category_scores_gemma":[0.00041454335,0.00007957899,0.000020449686,0.0001855716,0.00058765785,0.00013651539,0.00021571912,0.00034299062,1.5488475e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0050371685,0.0005170905,0.98793757,0.000074219235,0.000075658456,0.00016210199,0.0012934925,0.000008318801,0.0019786868,0.0009407284,0.000058168138,0.0019167678],"study_design_scores_gemma":[0.0016138081,0.0008298686,0.9944707,0.00034450318,0.000033110508,0.0001122476,0.0012127489,0.00011524451,0.00021246517,0.00085123634,0.00013901504,0.00006505829],"about_ca_topic_score_codex":0.00021603752,"about_ca_topic_score_gemma":0.00125664,"teacher_disagreement_score":0.0065330947,"about_ca_system_score_codex":0.00019288616,"about_ca_system_score_gemma":0.00020468602,"threshold_uncertainty_score":0.3245137},"labels":[],"label_agreement":null},{"id":"W4407771499","doi":"10.1039/d4mo00222a","title":"Revealing the dynamics of fungal disease with proteomics","year":2025,"lang":"en","type":"review","venue":"Molecular Omics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Institute of Infection and Immunity; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Dynamics (music); Proteomics; Computational biology; Biology; Computer science; Psychology; Genetics","score_opus":0.01578474683241027,"score_gpt":0.3098466002429805,"score_spread":0.29406185341057023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407771499","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005451715,0.98713064,0.008867418,0.00017707233,0.0000652602,0.0023362737,0.00021758275,0.000027169652,0.0006334377],"genre_scores_gemma":[0.00075784826,0.9954291,0.0017714086,0.00014950354,0.00004351275,0.0000915143,0.00035193856,0.00005848134,0.0013467007],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99825764,0.00013405702,0.0005730098,0.00043031917,0.00034346196,0.00026151075],"domain_scores_gemma":[0.99808204,0.0000991241,0.00032013247,0.0011960065,0.00017014013,0.00013253599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003219325,0.00036787495,0.0014175919,0.000099086676,0.00007118805,0.000020256792,0.00029961008,0.00021325318,0.0000064925875],"category_scores_gemma":[0.00035190946,0.00021453247,0.0006259249,0.0004195936,0.00020718543,0.00001993806,0.00010623992,0.00058184075,0.000003981752],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011253614,0.00047567472,0.001601275,0.30494902,0.001589978,0.001135081,0.000066896886,0.000035985613,0.000036968835,0.017593177,0.00028885,0.67110175],"study_design_scores_gemma":[0.0038293002,0.0011259625,0.00089890434,0.3235706,0.05008734,0.00031469247,0.0003600669,0.0025644798,0.00030146138,0.001548456,0.61204827,0.003350466],"about_ca_topic_score_codex":0.000009491606,"about_ca_topic_score_gemma":0.000017974016,"teacher_disagreement_score":0.66775125,"about_ca_system_score_codex":0.0002359681,"about_ca_system_score_gemma":0.0018838677,"threshold_uncertainty_score":0.87483805},"labels":[],"label_agreement":null},{"id":"W4407781032","doi":"10.1016/j.xpro.2025.103645","title":"Protocol to identify genes important for Candida albicans fitness in diverse environmental conditions using pooled bar-seq screening approach","year":2025,"lang":"en","type":"article","venue":"STAR Protocols","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Canadian Institutes of Health Research; Genome Canada; Canada Research Chairs; Canadian Institute for Advanced Research; Merck","keywords":"Candida albicans; Protocol (science); Bar (unit); Gene; Biology; Computational biology; Genetics; Medicine; Geography","score_opus":0.061605206498509237,"score_gpt":0.41743635774136206,"score_spread":0.3558311512428528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407781032","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2063193,0.00000623938,0.0122720115,0.00011545132,0.000019186788,0.78058964,0.0003195412,0.00004198084,0.00031665355],"genre_scores_gemma":[0.22885154,2.3256572e-7,0.00925268,0.00022051774,0.000046588513,0.7608595,0.00008439133,0.000021811582,0.0006627433],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979503,0.00007776115,0.0006141154,0.0005804624,0.0003121009,0.0004652393],"domain_scores_gemma":[0.99914426,0.000054214932,0.00012280224,0.00045241936,0.00005404359,0.0001722745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005270813,0.00024518138,0.0004643801,0.00019457641,0.00024575193,0.00004774655,0.0001663822,0.00012490546,0.00029994512],"category_scores_gemma":[0.00011240412,0.00022385588,0.0001608447,0.00029304234,0.00012953267,0.00014397794,0.000112034475,0.00019243419,0.0000052978353],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037006144,0.0010086591,0.83271855,0.0017308792,0.00015774525,0.000058799636,0.00046335132,0.0001693029,0.15654631,0.00038383136,0.00082497945,0.0022370068],"study_design_scores_gemma":[0.015300061,0.0008568806,0.92998844,0.0019978806,0.0002289122,0.000012851126,0.00478896,0.0048251194,0.021680828,0.00081666437,0.018751388,0.0007520156],"about_ca_topic_score_codex":0.00023715045,"about_ca_topic_score_gemma":0.00021800844,"teacher_disagreement_score":0.13486548,"about_ca_system_score_codex":0.00033957622,"about_ca_system_score_gemma":0.00033349314,"threshold_uncertainty_score":0.91285783},"labels":[],"label_agreement":null},{"id":"W4407850415","doi":"10.1016/j.eclinm.2025.103115","title":"The diagnosis of mucormycosis by PCR in patients at risk: a systematic review and meta-analysis","year":2025,"lang":"en","type":"review","venue":"EClinicalMedicine","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Gilead Sciences; AstraZeneca; Pfizer","keywords":"Medicine; Mucormycosis; Meta-analysis; Internal medicine; Pathology","score_opus":0.07971586346605701,"score_gpt":0.4082255054609629,"score_spread":0.3285096419949059,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407850415","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000036661568,0.9934441,0.000003932391,0.0007074667,0.000046625784,0.0051783985,0.00039795443,0.000013832463,0.00017107172],"genre_scores_gemma":[0.00023734922,0.99390984,0.000021376363,0.0008231204,0.000016269429,0.0010166903,0.00025250958,0.000024118184,0.0036987462],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9924091,0.001413107,0.004337605,0.0007817747,0.00072731636,0.0003310953],"domain_scores_gemma":[0.9846622,0.011013208,0.002071693,0.0017835484,0.00026031444,0.00020904964],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.0049014757,0.00055517664,0.017599618,0.0002508742,0.000105004015,0.0000083337645,0.000364927,0.00034496703,0.00036027082],"category_scores_gemma":[0.019491369,0.0002507286,0.0037446,0.0017584793,0.00036410452,0.000027479044,0.00022422429,0.000737751,0.00001790589],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002922464,0.0002926214,0.021600543,0.8853927,0.079150416,0.0000042540514,0.0000091119455,6.346936e-9,1.2325966e-9,0.00000376155,0.0084200455,0.005097269],"study_design_scores_gemma":[0.00045260333,0.00022748917,0.0012810249,0.12685037,0.83556086,7.228664e-7,0.000006716552,5.6165504e-7,4.48012e-8,0.0000061917954,0.035460714,0.00015271913],"about_ca_topic_score_codex":0.000075787386,"about_ca_topic_score_gemma":0.00018526381,"teacher_disagreement_score":0.75854236,"about_ca_system_score_codex":0.00015584921,"about_ca_system_score_gemma":0.00017464628,"threshold_uncertainty_score":0.9999945},"labels":[],"label_agreement":null},{"id":"W4407920046","doi":"10.1128/msphere.01037-24","title":"Exploring the differential localization of protein kinase A isoforms in <i>Candida albicans</i>","year":2025,"lang":"en","type":"article","venue":"mSphere","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Filamentation; Cytosol; Protein subunit; Protein kinase A; Biology; Candida albicans; Cytoplasm; Cell biology; Gene isoform; Biochemistry; Subcellular localization; Kinase; Gene; Genetics; Enzyme","score_opus":0.02935694493078373,"score_gpt":0.26552441687160006,"score_spread":0.23616747194081633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407920046","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98922276,0.00022918092,0.0051714294,0.00038783392,0.00006230604,0.00045149424,0.000002375449,0.000016204724,0.004456391],"genre_scores_gemma":[0.9977105,0.000041926276,0.00003709799,0.00012810004,0.00002358445,0.00006460745,0.0000046254845,0.0000057978045,0.00198376],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999335,0.00002941901,0.0002171795,0.00013971895,0.00014357409,0.00013513099],"domain_scores_gemma":[0.9996254,0.000024859051,0.00003535591,0.0002440854,0.000045410066,0.000024896863],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010276496,0.0000760878,0.00017644952,0.000026834943,0.000043020056,0.0000070837646,0.00006707721,0.00003326947,0.00021707675],"category_scores_gemma":[0.00009239393,0.000046824258,0.000055753102,0.00030858553,0.00007364359,0.00006339448,0.000028308288,0.00011901311,0.0000035535218],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018946494,0.00068703963,0.7946424,0.0015435574,0.00008287671,0.0000319333,0.0014585003,0.000086816595,0.053325497,0.004147729,0.0006549887,0.14144403],"study_design_scores_gemma":[0.0028271957,0.00024205318,0.9112729,0.0021955948,0.00008101925,0.0000011348694,0.0029982002,0.0016743016,0.071298376,0.0012655726,0.0059618573,0.00018178715],"about_ca_topic_score_codex":0.0004010614,"about_ca_topic_score_gemma":0.0013856472,"teacher_disagreement_score":0.14126223,"about_ca_system_score_codex":0.00005065222,"about_ca_system_score_gemma":0.000085930384,"threshold_uncertainty_score":0.23768382},"labels":[],"label_agreement":null},{"id":"W4408063162","doi":"10.1038/s44259-025-00083-6","title":"Aspergillus fumigatus mitogenomes and their influence on azole-resistant and -susceptible populations","year":2025,"lang":"en","type":"article","venue":"npj Antimicrobials and Resistance","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Azrieli Foundation; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Life Sciences Research Foundation; International Development Research Centre; Fundação de Amparo à Pesquisa do Estado de São Paulo; Canadian Institutes of Health Research; Universidade de São Paulo; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Wellcome Trust","keywords":"Biology; Aspergillus fumigatus; Azole; Gene; Mitochondrial DNA; Genetics; Mitochondrion; Phenotype; Genome; Intergenic region; Microbiology; Antifungal","score_opus":0.013761866037613937,"score_gpt":0.2711327064704878,"score_spread":0.2573708404328739,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408063162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98339677,0.008844876,0.00007990397,0.0020343787,0.00035272064,0.0004286739,0.00006992905,0.000062848325,0.0047299047],"genre_scores_gemma":[0.9912907,0.002936929,0.0010182323,0.0009599263,0.00014411594,0.000009224885,0.000014883906,0.000019868723,0.0036061325],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99835145,0.000062553416,0.00041548602,0.0006536983,0.00014658616,0.00037024464],"domain_scores_gemma":[0.9989856,0.000172873,0.00009998727,0.00042140184,0.00015437076,0.00016575368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027004964,0.00030838663,0.00055757817,0.0001526567,0.0005511401,0.00010434099,0.000083413914,0.00018655926,0.000017003693],"category_scores_gemma":[0.0002032378,0.00023431155,0.0000767795,0.00028132682,0.0005071979,0.00011978766,0.00008330537,0.0002511727,0.0000034965758],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020012015,0.00023246034,0.117564656,0.0012258898,0.0001471972,0.00004415091,0.0004827446,0.000006739754,0.84681594,0.01970357,0.008812701,0.0029627334],"study_design_scores_gemma":[0.0021039878,0.0002954563,0.9244572,0.0018007314,0.00015713545,0.000014104135,0.0005297175,0.000030446374,0.02836746,0.002527425,0.039198928,0.00051740406],"about_ca_topic_score_codex":0.000065968736,"about_ca_topic_score_gemma":0.00096047675,"teacher_disagreement_score":0.8184485,"about_ca_system_score_codex":0.000053721396,"about_ca_system_score_gemma":0.000098403405,"threshold_uncertainty_score":0.95549476},"labels":[],"label_agreement":null},{"id":"W4408128639","doi":"10.1093/jac/dkae473","title":"Relationship between posaconazole concentrations and clinical outcomes in paediatric cancer and haematopoietic stem cell transplant recipients","year":2025,"lang":"en","type":"review","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Posaconazole; Stem cell; Haematopoiesis; Medicine; Hematopoietic stem cell transplantation; Oncology; Internal medicine; Transplantation; Immunology; Biology; Antifungal; Voriconazole; Genetics","score_opus":0.05407163463715517,"score_gpt":0.38143161713984375,"score_spread":0.3273599825026886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408128639","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2756588,0.7227754,0.000036098714,0.0005900538,0.00023807163,0.00054571533,0.00011446139,0.000006221461,0.000035180223],"genre_scores_gemma":[0.1259172,0.87307775,0.00018755069,0.00020680668,0.00016264644,0.0000022171587,0.0000150487695,0.000021579599,0.00040921874],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99744654,0.0001963097,0.0016559531,0.0002881199,0.00019306352,0.00022004546],"domain_scores_gemma":[0.99770075,0.0011430813,0.0007169952,0.00017236684,0.00010510767,0.00016168528],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007013562,0.00029863248,0.0023395808,0.000282547,0.000064462816,0.000034819575,0.00011763533,0.0004217063,0.00001383145],"category_scores_gemma":[0.000053188098,0.00021860795,0.0005382056,0.0002861482,0.00013623298,0.00009167908,0.000015946478,0.0009240397,0.0000012965108],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010423075,0.00017782243,0.92976266,0.005665617,0.00016376631,0.000034288336,0.00013524748,1.0196246e-7,0.0000036918514,0.000004891447,0.00042358323,0.0635241],"study_design_scores_gemma":[0.0070434073,0.00035420727,0.91231126,0.029176287,0.0043522352,0.00014514341,0.000055416047,0.0000014322335,0.00003573682,0.000026885911,0.0459664,0.00053159305],"about_ca_topic_score_codex":0.000011956449,"about_ca_topic_score_gemma":0.00002664446,"teacher_disagreement_score":0.15030232,"about_ca_system_score_codex":0.00011983971,"about_ca_system_score_gemma":0.0008768969,"threshold_uncertainty_score":0.8914573},"labels":[],"label_agreement":null},{"id":"W4408139988","doi":"10.1093/mmy/myaf019","title":"Comparison of broth microdilution and Etest® methods for susceptibility testing of amphotericin B in <i>Candida auris</i>","year":2025,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; BC Centre for Disease Control; University of Toronto; Ste. Anne's Hospital; Dr. Georges-L.-Dumont University Hospital Centre; Manitoba Health; Provincial Laboratory of Public Health; University of Calgary; University of Manitoba; Toronto Public Health; Public Health Agency of Canada","funders":"","keywords":"Etest; Candida auris; Broth microdilution; Amphotericin B; Microbiology; Antifungal; Biology; Medicine; Minimum inhibitory concentration; Antibiotics","score_opus":0.041612565146661624,"score_gpt":0.46296985244861455,"score_spread":0.42135728730195293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408139988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96911544,0.000882109,0.028043447,0.00066747284,0.00011658634,0.0005795945,0.0000071774152,0.0000139001695,0.0005742891],"genre_scores_gemma":[0.9629405,0.000029551538,0.036601756,0.00031355396,0.000020134443,0.000022801678,0.000008129461,0.0000052445544,0.000058336595],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983178,0.00026657744,0.0007342088,0.00030739192,0.0001410104,0.00023301714],"domain_scores_gemma":[0.99675685,0.0026077768,0.0001518772,0.00022393747,0.00016548391,0.00009404954],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0019743822,0.00010796276,0.0008205418,0.00013028411,0.000030060666,0.0000016327604,0.00008678595,0.0002599167,0.00006699032],"category_scores_gemma":[0.009573229,0.00009124775,0.00006567839,0.0003662141,0.0005565777,0.000019221421,0.00006527005,0.00024488123,3.0189923e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006014456,0.00035172483,0.7510658,0.0008539667,0.000018051891,0.000001825801,0.00014308291,5.9193354e-7,0.20366274,0.00021664808,0.000287982,0.042796157],"study_design_scores_gemma":[0.0024225668,0.0010102747,0.9287125,0.00040449685,0.000082808256,0.0000049385403,0.00025129088,0.0025538171,0.06202849,0.0014458176,0.001006422,0.0000765764],"about_ca_topic_score_codex":0.0003546357,"about_ca_topic_score_gemma":0.0005368936,"teacher_disagreement_score":0.17764671,"about_ca_system_score_codex":0.00007121078,"about_ca_system_score_gemma":0.0003786081,"threshold_uncertainty_score":0.9987696},"labels":[],"label_agreement":null},{"id":"W4408155968","doi":"10.1038/s41467-025-57346-z","title":"Structure-guided optimization of small molecules targeting Yck2 as a strategy to combat Candida albicans","year":2025,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Foundation for the National Institutes of Health","keywords":"Candida albicans; Echinocandin; Casein kinase 1; Corpus albicans; Kinase; Antifungal; Pharmacology; Chemistry; Biology; Computational biology; Biochemistry; Protein kinase A; Microbiology; Fluconazole","score_opus":0.021418706037746243,"score_gpt":0.34083594482967455,"score_spread":0.3194172387919283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408155968","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.810973,0.019858565,0.038704302,0.027106151,0.0003456441,0.0028603948,0.00029836685,0.00027270397,0.09958087],"genre_scores_gemma":[0.94941527,0.0002446455,0.04808753,0.0012693089,0.00001393484,0.00001551322,0.0002834062,0.000011695558,0.0006586854],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.998999,0.00011032624,0.0003613045,0.00020696389,0.00016052026,0.00016187622],"domain_scores_gemma":[0.9977247,0.00018885215,0.000099044344,0.0013828296,0.000515425,0.00008913404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017137991,0.00012896833,0.0002757135,0.00014445047,0.00017870893,0.000018314497,0.0004915751,0.0002398919,0.00009975475],"category_scores_gemma":[0.0009207268,0.000117247844,0.000082424405,0.0006316759,0.0001250855,0.00003887948,0.00017527686,0.00061008206,0.000002750103],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013689712,0.002032419,0.26272312,0.0011703608,0.0011966593,0.00001926147,0.0035482722,0.072369166,0.2253458,0.3532912,0.06070312,0.01623164],"study_design_scores_gemma":[0.008528044,0.0017565654,0.7053978,0.0029720073,0.0019311035,0.000042421925,0.009756466,0.11416868,0.07039113,0.011069071,0.0719969,0.0019898277],"about_ca_topic_score_codex":0.000318307,"about_ca_topic_score_gemma":0.0023904128,"teacher_disagreement_score":0.44267467,"about_ca_system_score_codex":0.00009501591,"about_ca_system_score_gemma":0.0003657432,"threshold_uncertainty_score":0.47812283},"labels":[],"label_agreement":null},{"id":"W4408213309","doi":"10.1093/ofid/ofaf140","title":"Brief Report on Primary Cutaneous Invasive Aspergillosis in a Patient With Prolonged Neutropenia Following a Traumatic Injury","year":2025,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Medicine; Neutropenia; Aspergillosis; Intensive care medicine; Internal medicine; Immunology; Chemotherapy","score_opus":0.007723089092956819,"score_gpt":0.27421030413963815,"score_spread":0.2664872150466813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408213309","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9396514,0.00017532046,0.000011651204,0.0006228666,0.00011553996,0.0027047375,0.000023155435,0.000086992404,0.05660833],"genre_scores_gemma":[0.9950202,0.000032089563,0.000049203423,0.003342756,0.000012061212,0.00043694745,0.000075041804,0.0000329137,0.0009987494],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99792534,0.00010749854,0.0005249335,0.00065715006,0.00036284822,0.00042222824],"domain_scores_gemma":[0.9986971,0.00016591253,0.00016325229,0.0006930975,0.00010208565,0.00017855785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013203296,0.00029014982,0.00069479924,0.00021088994,0.0002177463,0.00012714922,0.0001818675,0.00008942049,0.000069625436],"category_scores_gemma":[0.00054252107,0.00022535653,0.00020531064,0.00058327196,0.0000879491,0.0002553645,0.00017629328,0.00025516225,0.000017513757],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003567133,0.0016879459,0.9788006,0.0002750606,0.00024467107,0.0064996947,0.00013753923,0.000019933383,0.00027722848,0.00018450627,0.0014626697,0.006843015],"study_design_scores_gemma":[0.0032736692,0.003380097,0.987376,0.002181421,0.00045677277,0.00040434365,0.0004981377,0.000013705692,0.00073944055,0.0006050443,0.00069625047,0.00037514706],"about_ca_topic_score_codex":0.0006046671,"about_ca_topic_score_gemma":0.0031083117,"teacher_disagreement_score":0.05560958,"about_ca_system_score_codex":0.0004992495,"about_ca_system_score_gemma":0.00089759514,"threshold_uncertainty_score":0.91897726},"labels":[],"label_agreement":null},{"id":"W4408349879","doi":"10.1016/j.chpulm.2025.100163","title":"A Multicenter Retrospective Study Evaluating IL-5-Targeted Biologic Therapies for the Treatment of Asthma and Allergic Bronchopulmonary Aspergillosis in Adults With Cystic Fibrosis","year":2025,"lang":"en","type":"article","venue":"CHEST Pulmonary","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; St. Michael's Hospital; University of British Columbia","funders":"Cystic Fibrosis Canada","keywords":"Allergic bronchopulmonary aspergillosis; Medicine; Cystic fibrosis; Asthma; Retrospective cohort study; Aspergillosis; Intensive care medicine; Allergic asthma; Immunology; Internal medicine; Immunoglobulin E","score_opus":0.019009760280833964,"score_gpt":0.29913131354561484,"score_spread":0.2801215532647809,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408349879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98805964,0.008396407,0.00003687967,0.00040396006,0.00004451727,0.002838347,0.000042380674,0.00002623179,0.00015162998],"genre_scores_gemma":[0.99754584,0.0007516453,0.00078037806,0.00005135976,0.000034193185,0.0004644374,0.000028375136,0.000016996419,0.0003267494],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985667,0.00011376852,0.00036419334,0.00050977356,0.0001911261,0.00025445767],"domain_scores_gemma":[0.9988053,0.00049389206,0.00011082624,0.00038710664,0.00015698292,0.00004591462],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031102714,0.0002497675,0.0005128148,0.00010357223,0.00013895986,0.00001039751,0.00009045066,0.00008526412,0.000020574022],"category_scores_gemma":[0.00014540697,0.00013703038,0.00011310585,0.00030852802,0.00022700388,0.000057821744,0.000032185853,0.00010936701,7.528596e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0125752995,0.0026619714,0.95885754,0.00027647696,0.0003209119,0.000034097033,0.003112505,0.000016232563,0.0066098473,0.000010160705,0.00000781467,0.015517121],"study_design_scores_gemma":[0.0037272219,0.007216421,0.9730041,0.00043507142,0.0001948327,0.000004392865,0.011149784,0.0036218916,0.00037512073,0.0000779704,0.00006978976,0.00012337709],"about_ca_topic_score_codex":0.00021863177,"about_ca_topic_score_gemma":0.0002842703,"teacher_disagreement_score":0.015393743,"about_ca_system_score_codex":0.00021222034,"about_ca_system_score_gemma":0.00007684229,"threshold_uncertainty_score":0.55879366},"labels":[],"label_agreement":null},{"id":"W4408386868","doi":"10.18280/ijdne.200222","title":"Relationship Between Steroid and Antibiotic Therapy and the Frequency of Oral Candidiasis","year":2025,"lang":"en","type":"article","venue":"International Journal of Design & Nature and Ecodynamics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Antibiotics; Antibiotic therapy; Medicine; Intensive care medicine; Biology; Microbiology","score_opus":0.0256290915534038,"score_gpt":0.30953975771667114,"score_spread":0.2839106661632673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408386868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98531735,0.0072472217,0.0037481766,0.003187898,0.00014938304,0.00012778045,0.000010092634,0.000002575049,0.00020951893],"genre_scores_gemma":[0.99583256,0.0019409056,0.00177854,0.00030085427,0.000053562235,2.9366615e-7,0.0000035425967,0.000004417992,0.00008531098],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999224,0.00008057434,0.0003292764,0.00009413238,0.00020198146,0.000070025126],"domain_scores_gemma":[0.998765,0.00064989453,0.00019028752,0.00007601919,0.00027591424,0.00004291859],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006678047,0.00008280885,0.00026105103,0.00015118548,0.000049705704,0.000035314835,0.000092792354,0.00012746247,0.0000031696184],"category_scores_gemma":[0.0003679106,0.00005058912,0.00006008085,0.000090862835,0.00020220144,0.00012883336,0.000021334341,0.00039914416,9.677793e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008023188,0.000028553688,0.98381376,0.000028889177,0.00025499723,0.000012626116,0.00022058818,0.0000022618503,0.00036192505,0.006588192,0.000068892805,0.007816982],"study_design_scores_gemma":[0.0024284949,0.00012929065,0.98298746,0.00015935421,0.00011890922,0.00005636727,0.00015589817,0.00023789848,0.00017615993,0.01346501,0.000041822143,0.000043329776],"about_ca_topic_score_codex":0.00002483672,"about_ca_topic_score_gemma":0.000033982946,"teacher_disagreement_score":0.010515219,"about_ca_system_score_codex":0.000033023534,"about_ca_system_score_gemma":0.000105081795,"threshold_uncertainty_score":0.20629644},"labels":[],"label_agreement":null},{"id":"W4408498471","doi":"10.1128/spectrum.03318-24","title":"The GPCR antagonist PPTN synergizes with caspofungin providing increased fungicidal activity against <i>Aspergillus fumigatus</i>","year":2025,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Aspergillus fumigatus; Biology; Aspergillosis; Cryptococcus neoformans; Microbiology; Caspofungin; Voriconazole; Immunology; Antifungal","score_opus":0.004596848088909525,"score_gpt":0.22992955932741088,"score_spread":0.22533271123850135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408498471","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98180383,0.0017310748,0.00019536221,0.0064986157,0.00031197007,0.00071372115,0.000076961674,0.0001663472,0.008502127],"genre_scores_gemma":[0.993121,0.00024318385,0.00010624119,0.0014116727,0.0001202007,0.00002948301,0.00009045676,0.000027956223,0.004849792],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978668,0.00019303442,0.00033729844,0.00068893377,0.000102252074,0.00081165426],"domain_scores_gemma":[0.99855083,0.00034371382,0.00012858893,0.00076318014,0.00008739627,0.00012629712],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004911171,0.00037169224,0.0005923106,0.000107034706,0.00077525363,0.00006137056,0.0002677984,0.000246188,0.000043672677],"category_scores_gemma":[0.00013799689,0.00022664253,0.000228072,0.00045515463,0.000826673,0.00007632598,0.00012532073,0.00060901593,0.000044014054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034817883,0.00020001824,0.09960207,0.00010091038,0.00036255465,0.0001700443,0.000052009545,0.000003225404,0.89020365,0.0013526337,0.003280901,0.0011902052],"study_design_scores_gemma":[0.0040358123,0.0009568055,0.12564033,0.00037127043,0.00043000854,0.00027962972,0.0006240879,0.00009841208,0.78535646,0.00019182793,0.08134819,0.0006671449],"about_ca_topic_score_codex":0.00030223525,"about_ca_topic_score_gemma":0.0028082647,"teacher_disagreement_score":0.104847156,"about_ca_system_score_codex":0.00032749327,"about_ca_system_score_gemma":0.00058621203,"threshold_uncertainty_score":0.9242214},"labels":[],"label_agreement":null},{"id":"W4408660256","doi":"10.1021/acs.jmedchem.5c00097","title":"Chemoproteomic Profiling of <i>C. albicans</i> for Characterization of Antifungal Kinase Inhibitors","year":2025,"lang":"en","type":"article","venue":"Journal of Medicinal Chemistry","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Structural Genomics Consortium","funders":"National Institute of General Medical Sciences; National Cancer Institute; Genentech; Janssen Biotech; Innovative Medicines Initiative; National Institutes of Health; Structural Genomics Consortium; Merck KGaA; Takeda Foundation; Ontario Genomics Institute; Genome Canada; North Carolina Biotechnology Center; National Institute of Allergy and Infectious Diseases; Bayer; Pfizer; Bristol-Myers Squibb; Boehringer Ingelheim","keywords":"Chemistry; Antifungal; Profiling (computer programming); Candida albicans; Kinase; Computational biology; Combinatorial chemistry; Stereochemistry; Biochemistry; Microbiology; Computer science; Biology; Programming language","score_opus":0.008614289678778309,"score_gpt":0.2818587756968201,"score_spread":0.2732444860180418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408660256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995301,0.0004477355,0.0025612987,0.0005882294,0.00016903628,0.00025035534,0.000021081516,0.000004739607,0.00065649475],"genre_scores_gemma":[0.99782205,0.00008963138,0.0012165221,0.000094894385,0.0003295931,0.0000035176688,0.000020774947,0.000009697915,0.00041334104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99836236,0.000014481248,0.0009428977,0.00013656337,0.00039455146,0.00014915912],"domain_scores_gemma":[0.99812603,0.00009052231,0.0007481417,0.00018718887,0.00075064925,0.000097481075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007108155,0.00012470562,0.0006174441,0.000077068544,0.000026615891,0.0000030449844,0.00011686761,0.0001351631,0.000043274213],"category_scores_gemma":[0.0008017239,0.0000991715,0.00024209193,0.0002093376,0.00017269733,0.00006502233,0.000018357961,0.00027130934,1.3076095e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020472433,0.00020042736,0.04240422,0.003465658,0.000091388094,0.000012236122,0.000051498402,6.1583876e-7,0.94982946,0.000013969496,0.00028019282,0.001603069],"study_design_scores_gemma":[0.0021589033,0.00025998987,0.017065141,0.0020138652,0.000258785,0.000035129073,0.0002944622,0.00003978564,0.97747505,0.000057521836,0.00028197578,0.000059375783],"about_ca_topic_score_codex":0.0000029449313,"about_ca_topic_score_gemma":2.2434615e-7,"teacher_disagreement_score":0.02764558,"about_ca_system_score_codex":0.00007692524,"about_ca_system_score_gemma":0.0006260197,"threshold_uncertainty_score":0.40440965},"labels":[],"label_agreement":null},{"id":"W4408996545","doi":"10.1016/j.idc.2025.01.002","title":"Invasive Aspergillosis in the Current Era","year":2025,"lang":"en","type":"review","venue":"Infectious Disease Clinics of North America","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Medicine; Aspergillosis; Current (fluid); Intensive care medicine; Immunology","score_opus":0.034596108391536116,"score_gpt":0.38021243139335537,"score_spread":0.34561632300181927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408996545","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023099126,0.9937033,0.00001762441,0.00007136858,0.00036002725,0.0017065895,0.0003539762,0.000038467668,0.001438701],"genre_scores_gemma":[0.01675884,0.98191386,0.000010112642,0.00042950572,0.00014639737,0.00022663212,0.00042120364,0.000026935617,0.00006647922],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969159,0.00042671867,0.0012906343,0.00059968047,0.00044183806,0.00032526915],"domain_scores_gemma":[0.995512,0.00222814,0.0006549264,0.0011536402,0.00022572033,0.00022554441],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00029262662,0.0004387556,0.0021829952,0.00031210043,0.00007560031,0.00001701471,0.0003565263,0.00011347779,0.00004901666],"category_scores_gemma":[0.0035705452,0.00028946096,0.0015060847,0.0013311688,0.00033983766,0.00004720625,0.00010759581,0.0012794358,0.00006395482],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054952056,0.0008844404,0.18218552,0.028758848,0.00013205167,0.000055287794,0.000025425803,0.0000012439622,9.502421e-10,0.00000830768,0.0007694492,0.78712445],"study_design_scores_gemma":[0.00036186446,0.00025545296,0.14435506,0.016830277,0.0029238996,0.0000025093243,0.000012724505,0.0000021669955,6.8950334e-9,0.000095835436,0.83488417,0.0002760445],"about_ca_topic_score_codex":0.000049439746,"about_ca_topic_score_gemma":0.0004125036,"teacher_disagreement_score":0.83411473,"about_ca_system_score_codex":0.00015027227,"about_ca_system_score_gemma":0.004083867,"threshold_uncertainty_score":0.9999558},"labels":[],"label_agreement":null},{"id":"W4409000158","doi":"10.1128/mra.01239-24","title":"Whole-genome sequencing of the first <i>Candida auris</i> clinical isolate from a patient with sepsis in Palestine","year":2025,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université Laval; Montreal Heart Institute","funders":"","keywords":"Candida auris; Biology; Phylogenetic tree; DNA sequencing; Genome; Clade; Sepsis; Genetics; Microbiology; Gene; Antifungal","score_opus":0.014388231147039453,"score_gpt":0.2661415219259666,"score_spread":0.2517532907789271,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409000158","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958204,0.000507883,0.00005551706,0.0012382424,0.0001055264,0.0005289526,0.0006396649,0.000015854668,0.0010879745],"genre_scores_gemma":[0.9950088,0.000027650503,0.00014314015,0.0034660776,0.000026290745,0.000015820522,0.00045834712,0.000010465352,0.0008433731],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99826515,0.00015312992,0.00069825276,0.00046612302,0.00009490084,0.0003224294],"domain_scores_gemma":[0.9989283,0.00013140803,0.00022095811,0.00057382154,0.00010066099,0.00004484067],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003480267,0.00018958881,0.00052751944,0.000075312324,0.000102966886,0.000007074767,0.00020629485,0.00017884947,0.000041090174],"category_scores_gemma":[0.00010839223,0.00011947459,0.00012828594,0.00039419552,0.00040709414,0.000026026431,0.0001557389,0.000367768,0.000011474517],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009384556,0.0001938359,0.7347592,0.000051356405,0.00012166543,0.000018988678,0.000402613,0.000020345055,0.26206893,0.0000012810374,0.0011243535,0.0002989684],"study_design_scores_gemma":[0.00471069,0.0010552909,0.6361633,0.0015167851,0.00022377465,0.000014382097,0.0013143126,0.00003973558,0.0012461685,0.000034999033,0.35343152,0.00024906753],"about_ca_topic_score_codex":0.00024829688,"about_ca_topic_score_gemma":0.00103093,"teacher_disagreement_score":0.35230717,"about_ca_system_score_codex":0.00018021211,"about_ca_system_score_gemma":0.00024134075,"threshold_uncertainty_score":0.48720327},"labels":[],"label_agreement":null},{"id":"W4409252319","doi":"10.1016/j.funbio.2025.101574","title":"Leading developments in basic research on aspergillosis and mucormycosis","year":2025,"lang":"en","type":"editorial","venue":"Fungal Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Israel Science Foundation; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Biology; Mucormycosis; Aspergillosis; Mycosis; Immunology; Pathology","score_opus":0.05400533308224098,"score_gpt":0.4156985743314532,"score_spread":0.3616932412492122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409252319","genre_codex":"editorial","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35935727,0.003399106,0.000005591865,0.0007930801,0.5792526,0.0012830863,0.0004874311,0.00009406444,0.05532779],"genre_scores_gemma":[0.74810195,0.0033791908,0.0002446877,0.0003191634,0.22388698,0.0001438679,0.00106805,0.0000529839,0.022803111],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.997018,0.00038523108,0.00046303897,0.0009788554,0.00047279918,0.0006820993],"domain_scores_gemma":[0.9964839,0.0025447803,0.00006884152,0.00043556993,0.00033048633,0.00013641521],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0016836299,0.00030601997,0.00086432276,0.0007713183,0.00014720508,0.00002120017,0.00020286329,0.0014922639,0.00008961826],"category_scores_gemma":[0.004429033,0.00025653336,0.000089983616,0.00054251985,0.00027577506,0.00003084006,0.00021266993,0.0022216463,0.00012516491],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010979605,0.00014050813,0.1940427,0.00045470317,0.00009361345,0.00007835471,0.000079501275,4.7260787e-8,0.0010179465,0.00045121062,0.79561645,0.006927012],"study_design_scores_gemma":[0.0014109545,0.0009613365,0.081146024,0.0014611343,0.000050201623,0.0000020338487,0.000121793775,0.000002399614,0.00068657205,0.00024017754,0.9135999,0.0003174462],"about_ca_topic_score_codex":0.00021237903,"about_ca_topic_score_gemma":0.00058340066,"teacher_disagreement_score":0.3887447,"about_ca_system_score_codex":0.00057217904,"about_ca_system_score_gemma":0.000963655,"threshold_uncertainty_score":0.9999887},"labels":[],"label_agreement":null},{"id":"W4409451487","doi":"10.1139/cjm-2024-0248","title":"From patterns to prediction: machine learning and antifungal resistance biomarker discovery","year":2025,"lang":"en","type":"review","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Antifungal; Limiting; Biomarker discovery; Biomarker; Identification (biology); Resistance (ecology); Biotechnology; Computational biology; Drug resistance; Medicine; Computer science; Machine learning; Risk analysis (engineering); Biology; Intensive care medicine; Proteomics; Bioinformatics; Engineering; Microbiology; Ecology","score_opus":0.021284926196730065,"score_gpt":0.293880264455302,"score_spread":0.27259533825857196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409451487","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0034443927,0.9918659,0.0001905929,0.00026444288,0.0007734385,0.00031091363,0.0028914905,0.0000061523833,0.00025268603],"genre_scores_gemma":[0.0039810757,0.98819184,0.00017412186,0.00021320609,0.0003641349,0.0000034485975,0.00045259536,0.000027735083,0.0065918686],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99807703,0.00027392118,0.00082948315,0.00039191954,0.00005803268,0.00036959976],"domain_scores_gemma":[0.9984292,0.00026710544,0.00035745275,0.00024378214,0.00015928574,0.0005432148],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003791362,0.00031901954,0.0017265513,0.00053332036,0.0001252988,0.00004762036,0.00018788273,0.00040352577,0.00024851502],"category_scores_gemma":[0.00048685688,0.0002472579,0.000379278,0.00023735638,0.00015064323,0.000067455156,0.00003739426,0.00084989006,0.000010087059],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078593503,0.00009288824,0.18552117,0.03350515,0.0026728367,0.0037104578,0.00042843694,5.558191e-7,0.001316082,0.000055553763,0.078416996,0.69349396],"study_design_scores_gemma":[0.00030919132,0.00013707097,0.003968486,0.022219088,0.00077472435,0.0004294067,0.000050565748,1.1101119e-7,0.000005917226,0.000007566993,0.9719282,0.00016966255],"about_ca_topic_score_codex":0.0013490352,"about_ca_topic_score_gemma":0.033609465,"teacher_disagreement_score":0.89351124,"about_ca_system_score_codex":0.0003290433,"about_ca_system_score_gemma":0.0029890733,"threshold_uncertainty_score":0.999998},"labels":[],"label_agreement":null},{"id":"W4409527948","doi":"10.1093/mmy/myaf040","title":"Optimization and clinical evaluation of a 5.8S rRNA quantitative PCR assay for the diagnosis of talaromycosis","year":2025,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; Dowager Countess Eleanor Peel Trust; Federation of European Microbiological Societies; National Institute for Health and Care Research","keywords":"Penicillium marneffei; DNA extraction; Biology; Whole blood; Polymerase chain reaction; Blood culture; Microbiology; Real-time polymerase chain reaction; Lysis; Dimorphic fungus; Assay sensitivity; White blood cell; Yeast; Molecular biology; Immunology; Medicine; Pathology; Human immunodeficiency virus (HIV); Antibiotics; Gene","score_opus":0.08103670506118105,"score_gpt":0.4495700096001707,"score_spread":0.36853330453898964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409527948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8985871,0.0023609716,0.08637014,0.010107846,0.00035995766,0.0013980614,0.000019785804,0.000010922637,0.00078521593],"genre_scores_gemma":[0.99526507,0.0012346699,0.0027643163,0.0004899891,0.000032868797,0.00013636803,0.000014313357,0.000004383873,0.000058021],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998261,0.00045243517,0.00054915674,0.00020287842,0.00041862586,0.000115941766],"domain_scores_gemma":[0.99171364,0.0072858618,0.00015617556,0.00019053121,0.00058782566,0.000065985085],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0054752748,0.00006993418,0.0004103825,0.000062446095,0.000046577337,0.0000019384786,0.00008067251,0.00022401861,0.00043028366],"category_scores_gemma":[0.029723968,0.000044822064,0.00011410993,0.0001947577,0.00058638206,0.000022658214,0.000041532163,0.00015305437,6.793092e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011860837,0.00085702405,0.9043193,0.00037346844,0.0005127452,0.0000019237102,0.00020359832,0.000092989845,0.00018625225,0.0064215893,0.004599257,0.0812458],"study_design_scores_gemma":[0.0043130154,0.0014178536,0.8145834,0.0002910407,0.0015884313,0.0000021169237,0.00055698905,0.17404032,0.0006606134,0.0016283884,0.00085203664,0.0000657741],"about_ca_topic_score_codex":0.000032488784,"about_ca_topic_score_gemma":0.0001315068,"teacher_disagreement_score":0.17394732,"about_ca_system_score_codex":0.000032937594,"about_ca_system_score_gemma":0.00047009846,"threshold_uncertainty_score":0.9784491},"labels":[],"label_agreement":null},{"id":"W4409828868","doi":"10.1016/j.ijmmb.2025.100865","title":"A study on the effectiveness of an antifungal stewardship program in immunocompromised patients in a tertiary-care teaching hospital: The antifungal stewardship (TAFS) study","year":2025,"lang":"en","type":"article","venue":"Indian Journal of Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Christian Medical College, Vellore; CMC Microsystems","keywords":"Antifungal; Stewardship (theology); Tertiary care; Medicine; Intensive care medicine; Teaching hospital; Family medicine; Political science","score_opus":0.010077218806463924,"score_gpt":0.3168868402198563,"score_spread":0.30680962141339235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409828868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99382293,0.00037111153,0.000004853274,0.00055560766,0.00049518625,0.004666983,0.000014578525,0.000013492985,0.000055260978],"genre_scores_gemma":[0.99961644,0.000015200339,0.000022255537,0.00016950029,0.000066313085,0.000073126525,0.000011047655,0.000021129772,0.0000049870005],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99067575,0.006427222,0.0013588808,0.000444804,0.0005942482,0.00049907214],"domain_scores_gemma":[0.9966609,0.0018475824,0.00042823193,0.0006179657,0.00029286303,0.00015244783],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.010139066,0.00032015666,0.0010359815,0.000448577,0.00014001103,0.000034633606,0.0010032422,0.00031154393,0.000027499396],"category_scores_gemma":[0.0025426839,0.00017047187,0.00023986462,0.00047985496,0.0004776331,0.00009460622,0.00014488773,0.002594308,0.0000023584955],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036599187,0.01450346,0.95416033,0.00023474984,0.00028249354,0.00086079416,0.012250347,0.0000015728592,0.002953837,0.000020133926,0.000021549633,0.011050809],"study_design_scores_gemma":[0.010925279,0.011471323,0.9393557,0.0020188685,0.000099952435,0.000036686528,0.035081077,0.0000030179153,0.00081329886,0.000030719824,0.000029372542,0.00013474708],"about_ca_topic_score_codex":0.00018554102,"about_ca_topic_score_gemma":0.0007070438,"teacher_disagreement_score":0.022830728,"about_ca_system_score_codex":0.00025871952,"about_ca_system_score_gemma":0.0006681583,"threshold_uncertainty_score":0.99970675},"labels":[],"label_agreement":null},{"id":"W4409919997","doi":"10.3390/antibiotics14050452","title":"The Influence of the Seasonal Variability of Candida spp. Bloodstream Infections and Antifungal Treatment: A Mediterranean Pilot Study","year":2025,"lang":"en","type":"article","venue":"Antibiotics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Alberta; University of Ottawa","funders":"","keywords":"Candida parapsilosis; Candida glabrata; Fluconazole; Candida albicans; Biology; Epidemiology; Corpus albicans; Microbiology; Antifungal; Internal medicine; Medicine","score_opus":0.0148124936243643,"score_gpt":0.29038608116515285,"score_spread":0.27557358754078853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409919997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997774,0.00014492865,0.000013132337,0.00031006354,0.00012873978,0.00069444487,0.000040432686,0.000012221324,0.0008820259],"genre_scores_gemma":[0.9992135,0.00017979997,0.00003055903,0.000038133494,0.00002481672,8.0599995e-7,0.000002345647,0.0000056637878,0.0005043403],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988864,0.00012450013,0.00036183375,0.00022796621,0.00023122584,0.00016806799],"domain_scores_gemma":[0.9984605,0.0005335605,0.00012228417,0.0006266819,0.0002064156,0.000050589224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047860987,0.00013764235,0.00031891288,0.000033944503,0.00024345265,0.000013432155,0.00011697197,0.000044304135,0.0000097590455],"category_scores_gemma":[0.0006836648,0.00007286436,0.00007994594,0.00037355893,0.0006348018,0.00003858196,0.00007779914,0.00014586498,7.207568e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019281353,0.0020323524,0.98926246,0.000120619734,0.00021855581,0.0000022066008,0.00021781966,0.000008027758,0.006786133,0.0004943652,0.00005989766,0.0006047284],"study_design_scores_gemma":[0.0010515905,0.0019220297,0.9904153,0.00013635485,0.0004199761,0.0000039846204,0.00044554763,0.000074567644,0.0052149673,0.00016147012,0.00010182953,0.000052380834],"about_ca_topic_score_codex":0.00090279826,"about_ca_topic_score_gemma":0.0020825453,"teacher_disagreement_score":0.0015711661,"about_ca_system_score_codex":0.000046557816,"about_ca_system_score_gemma":0.0003240331,"threshold_uncertainty_score":0.29713222},"labels":[],"label_agreement":null},{"id":"W4410217049","doi":"10.1097/fbp.0000000000000829","title":"In memory of Dr Emily Jutkiewicz, 1975–2024","year":2025,"lang":"en","type":"article","venue":"Behavioural Pharmacology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Psychology; Psychoanalysis; Materials science","score_opus":0.03407214332247273,"score_gpt":0.37558427225178237,"score_spread":0.34151212892930966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410217049","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98401916,0.0011113373,0.000011505573,0.002392145,0.0011004491,0.0003896707,0.000011486567,0.000024688068,0.01093954],"genre_scores_gemma":[0.96128994,0.00008398046,0.000073061776,0.0019832612,0.00005362906,0.000025590247,0.000008252216,0.0000080419395,0.03647427],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99886286,0.000073943294,0.00040387583,0.0002603737,0.00012801672,0.0002709481],"domain_scores_gemma":[0.9995272,0.000077039535,0.000060990038,0.00017972972,0.00008294366,0.00007206175],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002470002,0.00012690625,0.0004113123,0.00019558563,0.000028021124,0.0000024892022,0.00011341068,0.00012993594,0.001758305],"category_scores_gemma":[0.00003662666,0.000113928276,0.00015145219,0.00031705343,0.00018494128,0.00006138131,0.00006134431,0.0003324992,0.000030579853],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008312732,0.0005409113,0.6296096,0.00019771895,0.00005935945,0.00023017592,0.000105685904,0.000002037867,0.28411883,0.00018582601,0.08205041,0.0020681974],"study_design_scores_gemma":[0.0034208614,0.00019430743,0.89074755,0.000090720234,0.00042140228,0.000012613713,0.00019642268,0.000034903584,0.097580135,0.00017281724,0.0069989585,0.00012933507],"about_ca_topic_score_codex":0.0003061549,"about_ca_topic_score_gemma":0.00013574827,"teacher_disagreement_score":0.26113796,"about_ca_system_score_codex":0.000098054355,"about_ca_system_score_gemma":0.00021954007,"threshold_uncertainty_score":0.9991542},"labels":[],"label_agreement":null},{"id":"W4410299677","doi":"10.3390/antibiotics14050495","title":"New Curcumin Analogue (PAC) Inhibits Candida albicans Virulence, Restricts Its Adhesion Potential, and Relieves Oral Epithelial Cell Inflammation and Defense Mechanisms","year":2025,"lang":"en","type":"article","venue":"Antibiotics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; King Saud University; Université Laval","keywords":"Curcumin; Candida albicans; Virulence; Inflammation; Adhesion; Microbiology; Chemistry; Cell adhesion; Cell biology; Biology; Immunology; Biochemistry","score_opus":0.009472190322143283,"score_gpt":0.25111209048225724,"score_spread":0.24163990016011397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410299677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98853403,0.0010609337,0.008058776,0.0007258023,0.00017474468,0.00042024223,0.000030973384,0.00005616293,0.0009383208],"genre_scores_gemma":[0.9905776,0.0021424636,0.0034170367,0.00023798316,0.00008122535,2.545812e-7,0.000044273616,0.000017554541,0.0034816314],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985138,0.000072468974,0.00038226828,0.00044778103,0.000273344,0.0003103007],"domain_scores_gemma":[0.99916303,0.00007729537,0.00011509094,0.00028693056,0.00014061654,0.0002170129],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002647586,0.00022743134,0.00036971777,0.00019612705,0.0001840954,0.00006118856,0.00006976293,0.00023488211,0.00002164053],"category_scores_gemma":[0.00024849756,0.000200807,0.000061734485,0.00038147782,0.00010387473,0.00016243302,0.00009407507,0.00023938193,0.000015127511],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006606574,0.00012200508,0.044591498,0.0006628746,0.00005875704,0.00012949818,0.00031846465,0.0000089683635,0.9369646,0.004827903,0.002697581,0.008957248],"study_design_scores_gemma":[0.0026753296,0.0006428711,0.21623506,0.00073599885,0.0004564457,0.000028355285,0.00050882314,0.0010722327,0.7729668,0.002789072,0.0015082877,0.0003807196],"about_ca_topic_score_codex":0.00041424262,"about_ca_topic_score_gemma":0.00042330052,"teacher_disagreement_score":0.17164357,"about_ca_system_score_codex":0.000045618497,"about_ca_system_score_gemma":0.00033306066,"threshold_uncertainty_score":0.81886715},"labels":[],"label_agreement":null},{"id":"W4410334596","doi":"10.1101/2025.05.12.653471","title":"Met32 governs transcriptional control of sulfur metabolic flexibility and resistance to reactive sulfur species in the human fungal pathogen <i>Candida albicans</i>","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université Laval; Montreal Heart Institute","funders":"Canadian Institutes of Health Research; University of California, San Francisco; Natural Sciences and Engineering Research Council of Canada; Institut de Cardiologie de Montréal; Fondation Institut de Cardiologie de Montréal; Canada Foundation for Innovation; Concordia University; Julius-Maximilians-Universität Würzburg; Fonds de Recherche du Québec - Santé; Université de Lausanne; Centre Hospitalier Universitaire Vaudois","keywords":"Candida albicans; Fungal pathogen; Sulfur; Microbiology; Pathogen; Biology; Antifungal; Chemistry","score_opus":0.019909414794665892,"score_gpt":0.2570333772259426,"score_spread":0.2371239624312767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410334596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9865137,0.0047509787,0.0007639808,0.0010938793,0.00022667754,0.0021379525,0.0041136676,0.00007412831,0.0003250879],"genre_scores_gemma":[0.9973833,0.00029735774,0.0008446908,0.0008245502,0.00022592863,0.0002506569,0.0000021959795,0.000042567066,0.0001287294],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99564904,0.00051945227,0.0010291018,0.001317505,0.000905356,0.00057954533],"domain_scores_gemma":[0.99667263,0.00033160922,0.00037833594,0.0016636795,0.0006928063,0.00026096657],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0022142187,0.0006121519,0.0014746931,0.00027034665,0.00017281328,0.00007997584,0.00053791964,0.0004184388,0.000057885863],"category_scores_gemma":[0.00070761715,0.00051368965,0.00033970925,0.0007591817,0.0004255861,0.00012689977,0.00015772098,0.0011046893,0.0000034467016],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009495919,0.00039648893,0.20803854,0.00087081926,0.0002502123,0.000058835318,0.00014879221,0.0000044329627,0.77518463,0.01393807,0.00015816581,0.0000014182309],"study_design_scores_gemma":[0.001504402,0.000086787295,0.93297887,0.0006582336,0.00047327732,3.4996166e-8,0.000080342026,0.0000050430235,0.05563408,0.00003404744,0.00813766,0.00040721474],"about_ca_topic_score_codex":0.00031394037,"about_ca_topic_score_gemma":0.00065725617,"teacher_disagreement_score":0.72494036,"about_ca_system_score_codex":0.0003618994,"about_ca_system_score_gemma":0.0010699113,"threshold_uncertainty_score":0.9997315},"labels":[],"label_agreement":null},{"id":"W4410348597","doi":"10.1093/jac/dkaf143","title":"Early use of the novel antifungal rezafungin: a case series and literature review","year":2025,"lang":"en","type":"review","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Echinocandin; Medicine; Dosing; Voriconazole; Adverse effect; Anidulafungin; Echinocandins; Internal medicine; Intensive care medicine; Caspofungin; Antifungal; Fluconazole; Dermatology","score_opus":0.028633287541444122,"score_gpt":0.31628178911155674,"score_spread":0.2876485015701126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410348597","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0028582097,0.99466634,0.000024525527,0.0009436268,0.00033409195,0.00092087855,0.0002030776,0.000007652184,0.000041597978],"genre_scores_gemma":[0.00010262021,0.9948967,0.001228374,0.0013310289,0.00021577468,0.0000016314228,0.0000091232205,0.000043905133,0.00217086],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.997495,0.00016277375,0.0014765237,0.0003052634,0.00031416732,0.00024629815],"domain_scores_gemma":[0.9969557,0.00021232053,0.0014374852,0.00062675984,0.00065347075,0.00011429568],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00059123995,0.00047443868,0.0030850116,0.00020953217,0.000093142815,0.0000813125,0.0002516503,0.00040204087,0.000030486215],"category_scores_gemma":[0.00040062924,0.00026506133,0.0015349058,0.0008072711,0.0002593974,0.00027404024,0.00007131363,0.0011179134,6.5535056e-7],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001340473,0.0007451615,0.0006477972,0.6174256,0.002144504,0.0045178025,0.00035909828,1.1130933e-7,0.0036098831,0.000073355375,0.06395143,0.30518475],"study_design_scores_gemma":[0.00063719135,0.00019820192,0.000090259804,0.38794333,0.0016803113,0.042297903,0.0000054259895,8.897866e-8,0.0001968335,0.0000020827642,0.5667638,0.00018457498],"about_ca_topic_score_codex":0.0000062731465,"about_ca_topic_score_gemma":0.0000049568885,"teacher_disagreement_score":0.5028124,"about_ca_system_score_codex":0.00007410272,"about_ca_system_score_gemma":0.000915867,"threshold_uncertainty_score":0.99998015},"labels":[],"label_agreement":null},{"id":"W4410379637","doi":"10.1101/2025.05.13.653461","title":"Targeted loss of heterozygosity in <i>Candida albicans</i> using CRISPR-Cas9","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Fonds de Recherche du Québec - Santé; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"CRISPR; Biology; Loss of heterozygosity; Genetics; Allele; Cas9; Candida albicans; Genome; Genome editing; Computational biology; Gene","score_opus":0.017791934796433765,"score_gpt":0.2662634566512613,"score_spread":0.24847152185482752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410379637","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99421877,0.0016931671,0.0016243905,0.00014601888,0.00064240163,0.0010346739,0.00045480128,0.00013948332,0.000046310222],"genre_scores_gemma":[0.99544096,0.00029014,0.0036501572,0.00033012303,0.00016261042,0.000041496874,8.468465e-7,0.000061344435,0.000022349523],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9963701,0.00019690148,0.001050197,0.0011620355,0.0005653473,0.0006554169],"domain_scores_gemma":[0.9967453,0.00009824326,0.00046408048,0.0017331284,0.0006789683,0.00028026337],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007832564,0.00059570203,0.0014378004,0.00046780723,0.000090070425,0.000043528788,0.00041824378,0.000748146,0.00009975683],"category_scores_gemma":[0.00045806903,0.0006272725,0.00034983107,0.0008939066,0.0002999088,0.00011124544,0.0004643396,0.0012053234,0.000007919747],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038848395,0.00041963215,0.55350417,0.0025380377,0.00017570426,0.00020399093,0.000017581624,0.000060614224,0.44246078,0.00010152987,0.00012808971,0.0000014065016],"study_design_scores_gemma":[0.0013730576,0.00008175881,0.70776445,0.0027645126,0.00031982618,3.173006e-8,0.000008214081,0.0006316652,0.2857692,0.0000040139516,0.0006802736,0.000603026],"about_ca_topic_score_codex":0.0008221014,"about_ca_topic_score_gemma":0.00006680204,"teacher_disagreement_score":0.1566916,"about_ca_system_score_codex":0.0006625174,"about_ca_system_score_gemma":0.0018456999,"threshold_uncertainty_score":0.9996179},"labels":[],"label_agreement":null},{"id":"W4410404215","doi":"10.1128/aac.00137-25","title":"Antibiofilm activity of manogepix, ibrexafungerp, amphotericin B, rezafungin, and caspofungin against <i>Candida</i> spp. biofilms of reference and clinical strains","year":2025,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Biofilm; Caspofungin; Microbiology; Amphotericin B; Biology; Corpus albicans; Candida albicans; Minimum inhibitory concentration; Candida parapsilosis; Antimicrobial; In vitro; Bacteria; Antifungal; Biochemistry","score_opus":0.01997164311174092,"score_gpt":0.3176851957395196,"score_spread":0.29771355262777865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410404215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99708056,0.00030766585,0.00009186966,0.00093061855,0.000077037424,0.00039471037,0.0001261082,0.000020370404,0.00097107794],"genre_scores_gemma":[0.9807038,0.015647946,0.00062517106,0.0023754719,0.000029879502,9.2316577e-7,0.000021358164,0.00001749442,0.0005779559],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984673,0.000065913846,0.00054388266,0.00051301136,0.00013968165,0.00027020712],"domain_scores_gemma":[0.999136,0.0000851029,0.0002148355,0.00034118415,0.00009976104,0.00012316815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035753046,0.00025092522,0.0007969977,0.00010868307,0.000076656775,0.000021108437,0.00008621155,0.00022810022,0.000044250173],"category_scores_gemma":[0.00003624012,0.00021041822,0.00011628775,0.00021363187,0.0005735541,0.00008827287,0.000070474285,0.00021909722,8.40998e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00092612754,0.00036216585,0.52782494,0.0005212739,0.00018485587,0.000011291876,0.00010328905,7.7367005e-8,0.43749568,0.00005311101,0.0028369145,0.029680256],"study_design_scores_gemma":[0.002784828,0.00035145544,0.87846905,0.00047439875,0.00010229817,0.0000099234385,0.00007679535,0.00006101906,0.11520869,0.000022307568,0.0022576605,0.0001815427],"about_ca_topic_score_codex":0.0001981375,"about_ca_topic_score_gemma":0.00005552564,"teacher_disagreement_score":0.35064414,"about_ca_system_score_codex":0.00001698661,"about_ca_system_score_gemma":0.000107093125,"threshold_uncertainty_score":0.8580606},"labels":[],"label_agreement":null},{"id":"W4410521054","doi":"10.1038/s41467-025-59898-6","title":"Targeting epigenetic regulators to overcome drug resistance in the emerging human fungal pathogen Candida auris","year":2025,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"State Key Laboratory of Pathogen and Biosecurity; Stockholms Universitet; Huashan Hospital; Nanchang University; Recruitment Program of Global Experts; Science for Life Laboratory; Government of Jiangsu Province; Chinese Academy of Sciences; Fudan University; Institute of Microbiology, Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"Candida auris; Biology; Drug resistance; Antifungal drug; Acetylation; Echinocandin; Virulence; Histone; Fungal protein; Microbiology; Epigenetics; Candida albicans; Mutant; Genetics; Gene; Antifungal; Fluconazole","score_opus":0.012664938429037806,"score_gpt":0.3341957509928124,"score_spread":0.3215308125637746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410521054","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9036477,0.03337279,0.00011280233,0.041221585,0.00014003717,0.0010200351,0.000031291773,0.00007517496,0.020378558],"genre_scores_gemma":[0.9914988,0.0002752773,0.0026819657,0.0022714238,0.000039324306,0.00007064038,0.00007243116,0.00001289744,0.0030772113],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984979,0.00030494135,0.0003862556,0.00027587256,0.00026909818,0.0002659023],"domain_scores_gemma":[0.9970688,0.0003442047,0.00006962511,0.0023022704,0.00015039959,0.00006466685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00096086756,0.00014433454,0.0002435764,0.00017267063,0.00057870033,0.000032783864,0.0009112098,0.00015551578,0.00002080859],"category_scores_gemma":[0.00061025686,0.00011421665,0.00009438053,0.0010407376,0.000114908486,0.0000504731,0.0002232592,0.0011241182,0.000007773346],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013750517,0.00038674168,0.85851103,0.00016716038,0.00006898826,0.000018928125,0.0075511686,0.000016172065,0.022993796,0.04284729,0.066520005,0.000781183],"study_design_scores_gemma":[0.0003510177,0.000013004257,0.88652396,0.00028774943,0.00005536683,8.803688e-7,0.0015052207,0.00003307383,0.00025868457,0.0013701785,0.10946051,0.00014032346],"about_ca_topic_score_codex":0.0001354201,"about_ca_topic_score_gemma":0.014321434,"teacher_disagreement_score":0.0878511,"about_ca_system_score_codex":0.00019080714,"about_ca_system_score_gemma":0.00014556624,"threshold_uncertainty_score":0.79916966},"labels":[],"label_agreement":null},{"id":"W4410524812","doi":"10.1101/2025.05.18.654780","title":"<i>Candida auris</i> Metabolism and Growth Preferences in Physiologically Relevant Skin-like Conditions","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Canadian Institute for Advanced Research","keywords":"Candida auris; Microbiology; Metabolism; Fungal growth; Biology; Antifungal; Biochemistry","score_opus":0.013620471138397972,"score_gpt":0.24741194292978405,"score_spread":0.23379147179138607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410524812","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934127,0.0035990959,0.00013172103,0.00039275485,0.00052976504,0.0010622137,0.00052662176,0.00021003638,0.0001351369],"genre_scores_gemma":[0.99336535,0.0038768095,0.0014872338,0.00074899616,0.00020167824,0.00023402968,0.0000021840833,0.000033940603,0.00004977215],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9969362,0.00019821865,0.00068455725,0.0012576283,0.00038120104,0.00054219627],"domain_scores_gemma":[0.9978402,0.00017592052,0.0002637595,0.0009490307,0.00048799443,0.00028309764],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005155991,0.00055054756,0.0011271356,0.00030150908,0.00014409094,0.000092030336,0.00030898498,0.00063318823,0.000077501165],"category_scores_gemma":[0.0004994622,0.00048033035,0.00019025292,0.00051960925,0.00035014297,0.00011856271,0.00042062672,0.0011624652,0.000017460752],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007512418,0.001275729,0.42033187,0.004275243,0.0006216951,0.00029436895,0.00007408134,0.00001247882,0.56357205,0.0063128294,0.0024652702,0.0000131571205],"study_design_scores_gemma":[0.0009177194,0.00007331804,0.97571605,0.0012256565,0.0002543606,1.922162e-8,0.000009547684,0.0000475328,0.019904532,0.00011066606,0.0012684417,0.00047214757],"about_ca_topic_score_codex":0.00021571954,"about_ca_topic_score_gemma":0.000037341237,"teacher_disagreement_score":0.5553842,"about_ca_system_score_codex":0.00016615955,"about_ca_system_score_gemma":0.0009827208,"threshold_uncertainty_score":0.99976486},"labels":[],"label_agreement":null},{"id":"W4410579381","doi":"10.1016/j.rvsc.2025.105710","title":"Treatment of fungal urinary tract disease in dogs and cats: a scoping review","year":2025,"lang":"en","type":"review","venue":"Research in Veterinary Science","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Conestoga College; University of Guelph","funders":"","keywords":"CATS; Urinary system; Disease; Medicine; Physiology; Internal medicine; Microbiology; Biology","score_opus":0.30308360857627475,"score_gpt":0.5547554064764835,"score_spread":0.2516717979002087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410579381","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015763167,0.979659,4.40933e-7,0.00012321021,0.000041274685,0.003630917,0.000028892886,0.0000082344395,0.00074482005],"genre_scores_gemma":[0.017937837,0.98134,0.00007044865,0.00001173743,0.000021890703,0.00027004292,0.000010877515,0.000010850488,0.0003263458],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99600744,0.0006231512,0.00079656456,0.0009447105,0.0009446588,0.00068347267],"domain_scores_gemma":[0.99768716,0.0008405842,0.000108901535,0.00085816503,0.00014308053,0.00036211612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032440762,0.00027820465,0.0017520193,0.0014609335,0.00010849807,0.000027125461,0.00037603453,0.000079723184,0.000027399308],"category_scores_gemma":[0.0011773092,0.00020374409,0.00020203531,0.0036851715,0.0012894787,0.00021411513,0.00028957898,0.0004495576,0.0000067411943],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016662393,0.0011674088,0.0040665995,0.5226378,0.0000062103263,0.0041795913,0.00004338377,5.0818354e-8,0.0000096628555,0.000027857981,0.000005077156,0.46768975],"study_design_scores_gemma":[0.00039594912,0.0035491593,0.018583912,0.9571837,0.00007499901,0.00025832534,0.000019883752,0.000010703201,3.821452e-7,0.000016999136,0.019723054,0.00018291135],"about_ca_topic_score_codex":0.00015168643,"about_ca_topic_score_gemma":0.000007955683,"teacher_disagreement_score":0.46750686,"about_ca_system_score_codex":0.0008667028,"about_ca_system_score_gemma":0.008802741,"threshold_uncertainty_score":0.99681646},"labels":[],"label_agreement":null},{"id":"W4410763538","doi":"10.1139/cjm-2025-0009","title":"A β-amino-ketone that disrupts the fungal plasma membrane exhibits potent activity against pathogenic <i>Trichophyton</i> species","year":2025,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Trichophyton; Microbiology; Membrane; Ketone; Biology; Trichophyton rubrum; Biochemistry; Chemistry; Antifungal; Organic chemistry","score_opus":0.016632876290239573,"score_gpt":0.23717300574615785,"score_spread":0.22054012945591828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410763538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98646575,0.0028488538,0.00008763297,0.0057384833,0.00093134615,0.00028154082,0.0001323234,0.000007902716,0.003506166],"genre_scores_gemma":[0.9930199,0.0003791996,0.00005721974,0.0021580984,0.00020694501,0.0000026048085,0.000013102537,0.000014398174,0.0041485643],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99841136,0.00021697303,0.00043345575,0.00027013943,0.00009793539,0.0005701637],"domain_scores_gemma":[0.9984538,0.0002244975,0.00025450898,0.00039576582,0.0002656532,0.00040580682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061371026,0.00023622077,0.0006112782,0.00029481456,0.00027475285,0.00003344864,0.00032059517,0.00022562689,0.00013634132],"category_scores_gemma":[0.00032540734,0.00015647865,0.0003605149,0.000341682,0.00051079673,0.00008259125,0.000034532226,0.0007248507,0.000021049089],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067169167,0.00008465694,0.08916684,0.00009488163,0.00028801558,0.0011125923,0.0002672032,0.000008933487,0.8863986,0.000105440704,0.013276906,0.00852421],"study_design_scores_gemma":[0.0038003179,0.00062629674,0.63784266,0.0005341025,0.0004620414,0.002599832,0.0010734105,0.000016933973,0.19980043,0.0000784934,0.15274827,0.00041717605],"about_ca_topic_score_codex":0.00033566446,"about_ca_topic_score_gemma":0.022149814,"teacher_disagreement_score":0.6865982,"about_ca_system_score_codex":0.00042001126,"about_ca_system_score_gemma":0.0024695692,"threshold_uncertainty_score":0.9956934},"labels":[],"label_agreement":null},{"id":"W4410769837","doi":"10.1371/journal.ppat.1013220","title":"Adaptive morphological changes link to poor clinical outcomes by conferring echinocandin tolerance in Candida tropicalis","year":2025,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Natural Science Foundation of China","keywords":"Echinocandin; Caspofungin; Echinocandins; Candida tropicalis; Biology; Multidrug tolerance; Microbiology; Antifungal; Bacteria; Biofilm; Fluconazole; Genetics","score_opus":0.05292464684371894,"score_gpt":0.34524753913852474,"score_spread":0.2923228922948058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410769837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9838062,0.0003230895,0.0007146158,0.012339213,0.00015909839,0.00066351524,0.00014959459,0.00007074156,0.0017739263],"genre_scores_gemma":[0.9887701,0.00014545237,0.0011810657,0.008165988,0.00009278936,0.00006151871,0.00002300846,0.0000139021095,0.0015461206],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99808353,0.00015119571,0.00050258223,0.0005925225,0.0002519247,0.00041824082],"domain_scores_gemma":[0.99893934,0.0003091052,0.0000579178,0.0003727864,0.00008852102,0.00023233172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031919178,0.00021686028,0.0007892323,0.000112025686,0.00006672002,0.000016233358,0.00014712602,0.00022921096,0.000106215644],"category_scores_gemma":[0.00094189716,0.00016646532,0.0001662429,0.0002943316,0.00011920856,0.000029206893,0.000087095104,0.0004513542,0.00003996714],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006675984,0.00036981437,0.9800823,0.000038460385,0.000063575324,0.00024605048,0.00012410402,0.0000020979946,0.011347887,0.00024384097,0.0016109897,0.005203288],"study_design_scores_gemma":[0.0015074546,0.0004974639,0.99215937,0.00023705956,0.00007926256,0.0000020813945,0.00021033404,0.0003399499,0.0022457927,0.00012399816,0.0024069804,0.0001902657],"about_ca_topic_score_codex":0.00016298877,"about_ca_topic_score_gemma":0.0016305572,"teacher_disagreement_score":0.012077064,"about_ca_system_score_codex":0.00014161735,"about_ca_system_score_gemma":0.00014654828,"threshold_uncertainty_score":0.67882586},"labels":[],"label_agreement":null},{"id":"W4410773377","doi":"10.1172/jci.insight.176676","title":"A CARD9 deficiency mouse model recapitulates human chronic CNS candidiasis identifying defective monocytic cell responses in immunopathogenesis","year":2025,"lang":"en","type":"article","venue":"JCI Insight","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Christie (Canada); McGill University Health Centre; McGill University","funders":"CSL Behring; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Merck Canada; Janssen Pharmaceuticals; Cidara Therapeutics","keywords":"Immunology; Medicine; Neuroscience; Biology","score_opus":0.03043830953710751,"score_gpt":0.31563439439114005,"score_spread":0.2851960848540325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410773377","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9802825,0.009708909,0.0006308486,0.00006875934,0.0000923854,0.0006140333,0.00001968877,0.00008947835,0.008493404],"genre_scores_gemma":[0.98954034,0.0007495176,0.00022079714,0.00012313166,0.000028903534,0.000079605044,0.000016333921,0.000031416545,0.009209958],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99779725,0.00017638391,0.00054002664,0.0006347326,0.00028719418,0.00056438835],"domain_scores_gemma":[0.99875206,0.00017242039,0.00010178694,0.0007145853,0.0001472329,0.00011188722],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004925255,0.00028286237,0.0005590554,0.0005231941,0.00027863542,0.000058697613,0.00018538379,0.00019738202,0.000040855186],"category_scores_gemma":[0.0002806043,0.00026020413,0.00023687097,0.0006976614,0.00013391535,0.0002049676,0.000107653126,0.00034603014,0.000034948414],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008419783,0.0005309239,0.17579696,0.0007086529,0.00005667057,0.000108547356,0.003005315,0.0006145429,0.8167144,0.00045893237,0.00013615836,0.0010269353],"study_design_scores_gemma":[0.003589578,0.0004450078,0.5185115,0.0007338722,0.00040405287,0.000006843873,0.0016331592,0.004544967,0.46811113,0.0011589552,0.00025873893,0.00060222583],"about_ca_topic_score_codex":0.0010366834,"about_ca_topic_score_gemma":0.0027065657,"teacher_disagreement_score":0.34860328,"about_ca_system_score_codex":0.0015986228,"about_ca_system_score_gemma":0.0010518951,"threshold_uncertainty_score":0.99998504},"labels":[],"label_agreement":null},{"id":"W4410870320","doi":"10.14740/jmc5066","title":"Treatment of Invasive Fungal Disease During Therapy for Acute Lymphoblastic Leukemia","year":2025,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Lymphoblastic Leukemia; Disease; Intensive care medicine; Oncology; Leukemia; Immunology; Internal medicine","score_opus":0.024296255704079416,"score_gpt":0.3407198586170605,"score_spread":0.3164236029129811,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410870320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99219245,0.004760795,0.00034435347,0.0021795055,0.00020197858,0.00023192368,0.000025291216,0.000005720705,0.000057956553],"genre_scores_gemma":[0.99330926,0.005537157,0.00010730979,0.00025207613,0.00026661172,0.000007756616,0.0000033019267,0.000007284854,0.0005092286],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99856937,0.000037148653,0.0005037652,0.00011921178,0.0006092711,0.00016124007],"domain_scores_gemma":[0.9982682,0.00078580633,0.00018761565,0.00015437366,0.00024638267,0.00035763008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018573475,0.00011598513,0.0004911503,0.000109295936,0.00005241854,0.000006845139,0.00009583165,0.00008184148,0.00015017108],"category_scores_gemma":[0.0019508998,0.000071121176,0.00035583696,0.000107362335,0.00013772571,0.0000486968,0.0000133105605,0.00009073116,9.562161e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.10330828,0.005099349,0.74252605,0.0023402034,0.0044769463,0.030177705,0.00073898776,0.000021468433,0.027624954,0.00072322966,0.008205861,0.07475699],"study_design_scores_gemma":[0.030058775,0.008665391,0.9007215,0.0026000312,0.0020911817,0.0014343489,0.0008159678,0.0001885453,0.04989959,0.0004928151,0.002830028,0.00020182494],"about_ca_topic_score_codex":0.000012892618,"about_ca_topic_score_gemma":0.00001422685,"teacher_disagreement_score":0.15819548,"about_ca_system_score_codex":0.0003577967,"about_ca_system_score_gemma":0.0027680574,"threshold_uncertainty_score":0.49104148},"labels":[],"label_agreement":null},{"id":"W4410890544","doi":"10.1007/978-3-031-82202-5_7","title":"The Oral Mucosa-Fungi Interactome","year":2025,"lang":"en","type":"book-chapter","venue":"Springer series on biofilms","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Interactome; Oral mucosa; Biology; Computational biology; Microbiology; Medicine; Pathology; Biochemistry","score_opus":0.017546901270113005,"score_gpt":0.2707435685847817,"score_spread":0.2531966673146687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410890544","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00389983,0.0033484318,0.0000059069744,0.002895238,0.0015092171,0.00066815515,0.00009232355,0.00019538536,0.9873855],"genre_scores_gemma":[0.049004905,0.0029143344,0.00015257094,0.0010209657,0.0002767987,0.000015787436,0.000059204758,0.000059527625,0.9464959],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99806756,0.000018993938,0.00046772184,0.0005910046,0.00045074514,0.00040396745],"domain_scores_gemma":[0.99815285,0.00016515002,0.00016248967,0.001197688,0.00017807883,0.00014371525],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00025417298,0.00047420122,0.0006312686,0.00012914964,0.0002503684,0.00008590437,0.00030311535,0.00040890934,0.00091486494],"category_scores_gemma":[0.00013606124,0.00031010783,0.0004130065,0.00005803719,0.00037727007,0.0000771823,0.00017193043,0.0009325398,0.0006320948],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0071001914,0.00016727553,0.0036603191,0.00095830567,0.0012333036,0.0004934009,0.0002105394,2.6116365e-7,0.0038904864,0.7603157,0.09567817,0.12629203],"study_design_scores_gemma":[0.00030625562,0.00044578887,0.0044064377,0.0008589149,0.00013385744,0.00001022034,0.00006089713,0.0000020199614,0.0018015936,0.0013270746,0.9903245,0.00032242702],"about_ca_topic_score_codex":0.000015783931,"about_ca_topic_score_gemma":0.00019656983,"teacher_disagreement_score":0.89464635,"about_ca_system_score_codex":0.00017015586,"about_ca_system_score_gemma":0.00024247095,"threshold_uncertainty_score":0.99999845},"labels":[],"label_agreement":null},{"id":"W4410948784","doi":"10.21203/rs.3.rs-6270917/v1","title":"Genomic characterization of Candida parapsilosis hospital isolates revealed the spread and persistence of a fluconazole-resistant cluster associated with increased erg11 copies","year":2025,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Medical Research Council; Alliance de recherche numérique du Canada; University of British Columbia; Simon Fraser University; Nanyang Technological University; Sidra Medicine; McMaster University; Hamad Medical Corporation","keywords":"Persistence (discontinuity); Candida parapsilosis; Fluconazole; Biology; Cluster (spacecraft); Microbiology; Antifungal; Computer science","score_opus":0.0295446088332991,"score_gpt":0.3131934717273744,"score_spread":0.28364886289407526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410948784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99419916,0.0013391193,0.000022985405,0.0009037345,0.000036615653,0.002056402,0.0011135389,0.000020947651,0.00030751503],"genre_scores_gemma":[0.9974863,0.0010909004,0.000050421408,0.000035278725,0.000032497705,0.00010837144,0.00044985462,0.000020485959,0.0007259086],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9972464,0.00045129703,0.0005593619,0.00054904463,0.0007933738,0.0004005427],"domain_scores_gemma":[0.99651957,0.0007770659,0.00035559185,0.0007667065,0.0014534913,0.00012755723],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014580216,0.000267781,0.0008235305,0.00025074827,0.0001841978,0.00004376848,0.00027945297,0.00029185595,0.000043756758],"category_scores_gemma":[0.0011800679,0.0001772708,0.00017651948,0.00042176087,0.0008369139,0.000058519032,0.0004349332,0.0008033915,9.707528e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00397077,0.00039651175,0.91903675,0.0056504356,0.0006606493,0.000013328045,0.0024290655,0.0000037748569,0.06739047,0.00007532586,0.00013175492,0.00024119024],"study_design_scores_gemma":[0.0011606637,0.0009135194,0.98549354,0.0062274104,0.0002333761,9.990274e-7,0.001440238,0.00039975476,0.003859995,0.000070597336,0.00003478803,0.00016510198],"about_ca_topic_score_codex":0.0014087666,"about_ca_topic_score_gemma":0.0007103315,"teacher_disagreement_score":0.06645683,"about_ca_system_score_codex":0.00027565844,"about_ca_system_score_gemma":0.001127805,"threshold_uncertainty_score":0.72288936},"labels":[],"label_agreement":null},{"id":"W4410968149","doi":"10.14201/orl.33029","title":"Mucormicosis rino-órbito-cerebral asociada con COVID-19 y factores relacionados a la mortalidad. Revisión sistemática","year":2025,"lang":"es","type":"article","venue":"Revista ORL","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Coronavirus disease 2019 (COVID-19); Medicine; Internal medicine; Disease","score_opus":0.021163168026231086,"score_gpt":0.3446457715339385,"score_spread":0.3234826035077074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410968149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.844847,0.07522892,0.0009675847,0.012024366,0.0008614413,0.0032264167,0.0006455984,0.0005084691,0.061690204],"genre_scores_gemma":[0.96696657,0.00960099,0.0001318517,0.0034091212,0.00038672917,0.000062959036,0.00018612955,0.00007008613,0.019185549],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9939193,0.00096500496,0.0015777013,0.0014312204,0.0010754431,0.0010313323],"domain_scores_gemma":[0.9946419,0.0017337095,0.0005292808,0.0017718091,0.0004194834,0.0009037926],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017195274,0.0008361671,0.0018568638,0.0003258984,0.0005853013,0.00054790225,0.0006046456,0.00077444024,0.0019663577],"category_scores_gemma":[0.0063215857,0.0007575829,0.0009372133,0.0010703595,0.000790233,0.00024941243,0.0003037999,0.0012266855,0.0004902159],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059105805,0.0006938827,0.79880774,0.015332077,0.0006319367,0.00039061368,0.000305497,0.0000018705231,0.0011068869,0.13531803,0.04341701,0.0034033777],"study_design_scores_gemma":[0.0023861388,0.000242556,0.2566029,0.0069914577,0.0014384732,0.000027364864,0.00079689175,0.00007395765,0.0002677097,0.00033678173,0.7300949,0.00074087613],"about_ca_topic_score_codex":0.00049507804,"about_ca_topic_score_gemma":0.00008430675,"teacher_disagreement_score":0.6866779,"about_ca_system_score_codex":0.0013909339,"about_ca_system_score_gemma":0.00281166,"threshold_uncertainty_score":0.9994875},"labels":[],"label_agreement":null},{"id":"W4411149662","doi":"10.1016/j.cub.2025.01.063","title":"Candida","year":2025,"lang":"en","type":"review","venue":"Current Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology","score_opus":0.09925701616358523,"score_gpt":0.4853178422570541,"score_spread":0.38606082609346887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411149662","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000028857908,0.99352825,0.000058205285,0.00002218427,0.0012836021,0.00052751414,0.00009355665,0.000040510437,0.004443286],"genre_scores_gemma":[0.000015236641,0.9965039,0.000015771395,0.00003463711,0.00027320223,0.000049139202,0.0007016691,0.000009442057,0.002396999],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988273,0.000104306324,0.00037069607,0.00040578822,0.000049552364,0.00024237536],"domain_scores_gemma":[0.99918705,0.00015916314,0.000103296115,0.00042098676,0.00004860783,0.00008089825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012040636,0.00024028418,0.0015973551,0.0001289016,0.000034750567,0.000003951623,0.0001232808,0.00031238832,0.0002254221],"category_scores_gemma":[0.0002563155,0.0001557444,0.00049485435,0.00020268801,0.000114036484,0.0000070521505,0.000068252426,0.00045068827,0.00020355752],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006747892,0.00004505714,0.00051195174,0.037803855,0.00005246567,0.0000035509554,0.0000022080317,2.5540983e-10,1.3319114e-7,0.00063822494,0.0051375283,0.95579827],"study_design_scores_gemma":[0.000107421976,0.000049659204,0.00005038881,0.015496344,0.0006191611,0.000006727099,0.0000013404341,8.387532e-8,1.5220424e-7,0.00007518924,0.9834787,0.000114805334],"about_ca_topic_score_codex":0.000006233801,"about_ca_topic_score_gemma":0.000010348714,"teacher_disagreement_score":0.9783412,"about_ca_system_score_codex":0.00010593616,"about_ca_system_score_gemma":0.0008971283,"threshold_uncertainty_score":0.6351073},"labels":[],"label_agreement":null},{"id":"W4411216286","doi":"10.1007/978-1-0716-4627-4_10","title":"Purification of Type IV and Type VI Lipoteichoic Acids from Gram-Positive Mucosal Pathogens via a Two-Step Hot Water–Phenol/Triethylammonium Acetate Extraction Method","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"TransAlta (Canada); University of Alberta","funders":"","keywords":"Phenol; Gram; Extraction (chemistry); Lipoteichoic acid; Chemistry; Chromatography; Microbiology; Biology; Organic chemistry; Bacteria; Staphylococcus aureus","score_opus":0.017718664454217284,"score_gpt":0.394351722978847,"score_spread":0.37663305852462975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411216286","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3949823,0.0014366085,0.60251325,0.00022389618,0.00024618534,0.000307382,0.00001075764,0.0000200657,0.00025957482],"genre_scores_gemma":[0.3943915,0.00018177013,0.6049436,0.00016246644,0.000029479475,0.00001450265,0.00012168029,0.0000159749,0.00013906078],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99653697,0.0019419192,0.0005022692,0.0006078666,0.000102675236,0.00030828814],"domain_scores_gemma":[0.9986143,0.0004239972,0.00012435381,0.00048552745,0.00028037798,0.00007140846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017796601,0.00021895362,0.0006157704,0.00021805923,0.000052128613,0.000009595241,0.00010986374,0.00035681576,0.0000402019],"category_scores_gemma":[0.00072761165,0.00017566365,0.00010224855,0.0004148557,0.00020875742,0.00003940685,0.000083222716,0.0003900883,0.000006271905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014296616,0.00010205566,0.012970641,0.000057154153,0.00012864503,0.000024298766,0.00021077388,0.0000063217663,0.90812045,0.000638197,0.0000039268893,0.07630787],"study_design_scores_gemma":[0.001139137,0.00043795674,0.051215623,0.000058099602,0.0002577422,0.000010542378,0.00012882504,0.0016159471,0.9352193,0.009161225,0.0005829926,0.00017263855],"about_ca_topic_score_codex":0.00038848733,"about_ca_topic_score_gemma":0.000081134014,"teacher_disagreement_score":0.07613523,"about_ca_system_score_codex":0.00008271451,"about_ca_system_score_gemma":0.00009791123,"threshold_uncertainty_score":0.7163356},"labels":[],"label_agreement":null},{"id":"W4411227393","doi":"10.1016/j.cmi.2025.06.001","title":"Survival and quality-of-life in mucormycosis: a multicentric ambispective cohort study","year":2025,"lang":"en","type":"article","venue":"Clinical Microbiology and Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ciena (Canada)","funders":"","keywords":"Mucormycosis; Cohort; Quality of life (healthcare); Medicine; Cohort study; Surgery; Internal medicine; Nursing","score_opus":0.05197707263906798,"score_gpt":0.4104605885161204,"score_spread":0.3584835158770524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411227393","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978655,0.00042331623,0.00011047323,0.00010659834,0.00029315107,0.00061597157,0.0000036442805,0.000015278605,0.0005660932],"genre_scores_gemma":[0.99900186,0.00064474,0.000018857847,0.00018688737,0.000024886955,0.000011288276,0.0000067288383,0.0000026703744,0.00010207386],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99839175,0.00050115236,0.0006406181,0.00033075133,0.00002106232,0.0001146403],"domain_scores_gemma":[0.9988959,0.00072649866,0.00010429996,0.00013802058,0.00008797808,0.000047295674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017317007,0.000086437234,0.00056531373,0.00009871337,0.000046378787,0.0000034244774,0.000018881148,0.00019489467,0.000015553973],"category_scores_gemma":[0.002395066,0.000070888644,0.00006074046,0.00019952239,0.00029673488,0.0000340595,0.000045758712,0.00029534433,0.0000026163975],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010788279,0.0010550414,0.9933901,0.000081677994,0.00011996724,9.683112e-7,0.000051116687,1.2068628e-7,0.0028131404,0.00023793428,0.000028272767,0.001142843],"study_design_scores_gemma":[0.0030652627,0.00056734163,0.9956393,0.000047634447,0.00008176493,0.0000011473159,0.00029244905,0.000009457593,0.00007296542,0.00006720232,0.00009943485,0.000056012952],"about_ca_topic_score_codex":0.0005856987,"about_ca_topic_score_gemma":0.0019690234,"teacher_disagreement_score":0.002740175,"about_ca_system_score_codex":0.000029102326,"about_ca_system_score_gemma":0.00006539297,"threshold_uncertainty_score":0.2890755},"labels":[],"label_agreement":null},{"id":"W4411239718","doi":"10.1080/20523211.2025.2514155","title":"A real-world study based on the FAERS database evaluating adverse drug reactions in three amphotericin B lipid formulations","year":2025,"lang":"en","type":"article","venue":"Journal of Pharmaceutical Policy and Practice","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"Natural Science Foundation of Hebei Province","keywords":"Amphotericin B; Pharmacy; Drug; Adverse drug reaction; Medicine; Adverse effect; Database; Pharmacology; Computer science; Drug reaction; Antifungal; Dermatology; Family medicine","score_opus":0.13855024612948766,"score_gpt":0.5080518880068925,"score_spread":0.36950164187740486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411239718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9030716,0.000075386684,0.00067605707,0.07194302,0.00015244567,0.000796833,0.000010689278,0.000011923635,0.023262052],"genre_scores_gemma":[0.9919636,0.00016256545,0.0009200891,0.006327177,0.00021925611,0.000007684311,0.0000014535719,0.0000074293603,0.0003907175],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979306,0.0006882949,0.0005901665,0.00016174735,0.0004252099,0.00020398502],"domain_scores_gemma":[0.99165154,0.007427132,0.0002740041,0.00026119433,0.00023345748,0.00015269234],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00470551,0.0001240905,0.00025589866,0.00036908235,0.00019858975,0.000028552779,0.000093013965,0.000031322947,0.00009852488],"category_scores_gemma":[0.013133599,0.00008104237,0.00008922566,0.00081578986,0.00009280918,0.00038239177,0.000036853828,0.0009024239,0.0000046376904],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.1137562,0.02333247,0.6522625,0.0013868442,0.00180706,0.0012426696,0.008399588,0.003653462,0.07245192,0.046001706,0.015246888,0.06045867],"study_design_scores_gemma":[0.014678229,0.0015918824,0.8460403,0.0013250301,0.0024459863,0.00011808772,0.010028747,0.07202006,0.0010338797,0.0016820309,0.048691593,0.000344184],"about_ca_topic_score_codex":0.0007428816,"about_ca_topic_score_gemma":0.0005999867,"teacher_disagreement_score":0.19377777,"about_ca_system_score_codex":0.00022198362,"about_ca_system_score_gemma":0.0005984205,"threshold_uncertainty_score":0.9951792},"labels":[],"label_agreement":null},{"id":"W4411242425","doi":"10.1097/mat.0000000000002480","title":"Use of Therapeutic Drug Monitoring to Personalize Antifungals for Blastomycosis in Pediatric Patients on Extracorporeal Membrane Oxygenation: A Case Series","year":2025,"lang":"en","type":"article","venue":"ASAIO Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; Public Health Ontario; Hospital for Sick Children; Children's Hospital of Western Ontario; University of Toronto; Western University","funders":"","keywords":"Extracorporeal membrane oxygenation; Therapeutic drug monitoring; Medicine; Drug; Intensive care medicine; Pharmacology; Internal medicine","score_opus":0.04143301100189378,"score_gpt":0.31906635287582374,"score_spread":0.27763334187392996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411242425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99795794,0.00034916142,0.00019813051,0.00058768893,0.0003484426,0.00038844644,0.000024480501,0.000010806619,0.00013491814],"genre_scores_gemma":[0.99721324,0.00023093194,0.0009982456,0.0001823627,0.00019693481,0.000019044834,0.0000041309386,0.0000126689965,0.0011424166],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99862856,0.000069056674,0.0005036685,0.00021863397,0.00033151114,0.0002485436],"domain_scores_gemma":[0.9988257,0.00029839762,0.00015472983,0.00017505897,0.0004207653,0.00012533885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042343454,0.00015073532,0.00034060204,0.0003755971,0.00013117983,0.000041020692,0.00007373629,0.0000681034,0.000027025055],"category_scores_gemma":[0.00038004192,0.0001260316,0.00016098462,0.00043691465,0.00002919973,0.00021496217,0.000017216986,0.00025233842,0.0000022964236],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021302814,0.0004113006,0.9838702,0.00024122362,0.0000620047,0.0001999659,0.0007510282,0.000040225557,0.0022350638,0.0000950627,0.00057397527,0.009389688],"study_design_scores_gemma":[0.001865384,0.00052396517,0.98845863,0.00035120719,0.00016274829,0.00013501619,0.0006142048,0.000028151153,0.0070416927,0.00010516491,0.0005846079,0.00012925206],"about_ca_topic_score_codex":0.000032113625,"about_ca_topic_score_gemma":0.00010214899,"teacher_disagreement_score":0.009260436,"about_ca_system_score_codex":0.0001562715,"about_ca_system_score_gemma":0.00018702261,"threshold_uncertainty_score":0.513942},"labels":[],"label_agreement":null},{"id":"W4411247977","doi":"10.1007/82_2025_314","title":"Emerging Human Health Problems Caused by Pathogenic and Immuno-activating Fungi","year":2025,"lang":"en","type":"article","venue":"Current topics in microbiology and immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Public Health Ontario","funders":"","keywords":"Human health; Biology; Microbiology; Virology; Computational biology; Medicine; Environmental health","score_opus":0.018987341200884675,"score_gpt":0.32189489462061505,"score_spread":0.30290755341973036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411247977","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8666413,0.13132948,0.00012543124,0.0011535886,0.00030488597,0.0002806909,0.000011558168,0.000020829026,0.00013223615],"genre_scores_gemma":[0.99093646,0.008051619,0.000051288047,0.0002874613,0.000022198807,0.000015904534,0.00011804869,0.0000062797485,0.0005107312],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987591,0.00014587569,0.0003841406,0.00035982637,0.00001706514,0.00033397906],"domain_scores_gemma":[0.99959195,0.00005415995,0.00008941746,0.00020346427,0.000033649838,0.00002737511],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000291143,0.00014874112,0.0004121579,0.00011957919,0.00019387342,0.0000074913223,0.000066319575,0.00017426806,0.000021632135],"category_scores_gemma":[0.000058131518,0.00013596281,0.000036017736,0.00012651269,0.00030940643,0.000035244226,0.000109343935,0.0005070142,0.0000014220616],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005367898,0.00012272461,0.22084244,0.00031999315,0.00006354116,0.0000018053029,0.00043350365,8.315701e-8,0.707801,0.001615131,0.0004511431,0.06829497],"study_design_scores_gemma":[0.0041966382,0.0006992872,0.84510815,0.0010754782,0.000043209147,0.00005158594,0.00083691673,0.000015916086,0.009005572,0.001563358,0.1370345,0.00036935852],"about_ca_topic_score_codex":0.00003642347,"about_ca_topic_score_gemma":0.00009508957,"teacher_disagreement_score":0.69879544,"about_ca_system_score_codex":0.00007912572,"about_ca_system_score_gemma":0.00008986719,"threshold_uncertainty_score":0.55444026},"labels":[],"label_agreement":null},{"id":"W4411346311","doi":"10.1139/cjm-2025-0036","title":"<i>Candida albicans</i>: a historical overview of investigations into an important human pathogen","year":2025,"lang":"en","type":"review","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Candida albicans; Genomics; Computational biology; Genome; CRISPR; Functional genomics; Corpus albicans; Population; Genetics; Microbiology; Gene; Medicine","score_opus":0.06551468212777399,"score_gpt":0.34879091914375115,"score_spread":0.28327623701597715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411346311","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010418253,0.9974343,0.000011049814,0.00018602356,0.00038360723,0.00033826366,0.00037587198,0.000003853852,0.00022516029],"genre_scores_gemma":[0.0006012877,0.99706894,0.00046145055,0.00036838357,0.00020485885,0.000005928037,0.00036234915,0.000027384853,0.00089939364],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99717337,0.00034132527,0.0017700267,0.00029581442,0.0000722452,0.0003472402],"domain_scores_gemma":[0.9970878,0.00011913047,0.0010792675,0.00048551767,0.00038306846,0.00084522174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006533472,0.00031287086,0.0026521087,0.00066045107,0.000115319184,0.0000086731825,0.00038483617,0.0005141996,0.00032122034],"category_scores_gemma":[0.00047476933,0.0002446037,0.000782218,0.00040626456,0.0003426159,0.00004494454,0.000020825273,0.00072877127,0.0000034143798],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001464439,0.0005867898,0.038531866,0.15266949,0.0036191533,0.004957857,0.0017033682,5.5933106e-7,0.024117796,0.005341101,0.12583975,0.64248586],"study_design_scores_gemma":[0.00024013483,0.000448936,0.00015629416,0.011335945,0.0013205295,0.000703422,0.000023909524,3.2286213e-8,0.000008274198,0.0001962852,0.98539454,0.0001716732],"about_ca_topic_score_codex":0.00592475,"about_ca_topic_score_gemma":0.083449736,"teacher_disagreement_score":0.8595548,"about_ca_system_score_codex":0.0014869651,"about_ca_system_score_gemma":0.01651675,"threshold_uncertainty_score":0.99746495},"labels":[],"label_agreement":null},{"id":"W4411597591","doi":"10.36584/cjic.2021.004.02.184.187","title":"Identification of Candida auris in a foreign repatriated patient to Ontario, Canada and infection control strategies to prevent transmission","year":2021,"lang":"en","type":"article","venue":"Canadian Journal of Infection Control","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Candida auris; Transmission (telecommunications); Identification (biology); Infection control; Medicine; Biology; Microbiology; Intensive care medicine; Antifungal; Computer science; Telecommunications; Ecology","score_opus":0.006150680283922204,"score_gpt":0.2282058079321665,"score_spread":0.22205512764824428,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411597591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900597,0.0002003592,0.008123707,0.00072533236,0.00022464039,0.00050200603,0.00002363176,0.0000030565604,0.0001376151],"genre_scores_gemma":[0.9994635,0.000021338814,0.00003544246,0.00033647576,0.000039769562,0.000010515202,0.0000041990925,0.000007963171,0.00008082625],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985712,0.00009756739,0.0007481717,0.00016700255,0.00021640792,0.00019962779],"domain_scores_gemma":[0.9982787,0.000055337652,0.00023894684,0.00013371755,0.0007041913,0.0005891589],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041396893,0.00011274419,0.00038288225,0.0002977806,0.000071407354,0.00003401025,0.00002388407,0.00007573191,0.00013438032],"category_scores_gemma":[0.00037863557,0.00010492136,0.00009107237,0.00031254438,0.000019489311,0.00013286939,0.000002141473,0.0002063599,4.950568e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007835498,0.00008831622,0.9600443,0.0000950418,0.00013152997,0.00019008035,0.0012502227,0.0028862697,0.025583664,0.000058958136,0.00082535547,0.008062662],"study_design_scores_gemma":[0.0021878341,0.00068330526,0.987525,0.000281138,0.00012524656,0.00009188291,0.00027128146,0.00015341803,0.005516976,0.00008321861,0.0029771216,0.00010360595],"about_ca_topic_score_codex":0.9749808,"about_ca_topic_score_gemma":0.99941707,"teacher_disagreement_score":0.02748062,"about_ca_system_score_codex":0.0013637772,"about_ca_system_score_gemma":0.009029689,"threshold_uncertainty_score":0.9965882},"labels":[],"label_agreement":null},{"id":"W4411777960","doi":"10.1101/2025.06.28.660404","title":"Characterization of <i>ORF19.7608</i> ( <i>PPP1</i> ), a Biofilm-induced Gene of <i>Candida albicans</i>","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Concordia University","keywords":"Biofilm; Candida albicans; Microbiology; Gene; Chemistry; Biology; Genetics; Bacteria","score_opus":0.014234730053920615,"score_gpt":0.23794059033932805,"score_spread":0.22370586028540743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411777960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99440783,0.0005690793,0.0008879035,0.0002453716,0.0007574606,0.0013470295,0.0015042132,0.00017438568,0.000106744796],"genre_scores_gemma":[0.9964762,0.000754157,0.0017784328,0.00048652643,0.00025690914,0.000100945224,0.000007310248,0.000081432976,0.000058083348],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9961716,0.00011981878,0.0013458959,0.0011094102,0.00071254856,0.000540704],"domain_scores_gemma":[0.99518836,0.000085153224,0.0010484979,0.0020764566,0.0013077729,0.00029377942],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006838143,0.000643452,0.0016248551,0.00040825657,0.00008416449,0.00003469768,0.00048441257,0.00081981026,0.00008877044],"category_scores_gemma":[0.00033286464,0.0006570453,0.00045408754,0.0009721934,0.00025235154,0.00012313778,0.00038266374,0.00078736205,0.00001075441],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003811666,0.0004475762,0.04271494,0.0028719662,0.00029768035,0.00002350358,0.000015896938,0.0000013871729,0.9529094,0.00024049032,0.00008885412,0.000007130631],"study_design_scores_gemma":[0.00088131457,0.00014118897,0.18043734,0.0014702477,0.00041243312,1.7939762e-8,0.0000031975067,0.000039886516,0.8149344,0.0000010532714,0.0012861771,0.0003927691],"about_ca_topic_score_codex":0.00016132557,"about_ca_topic_score_gemma":0.0000076084057,"teacher_disagreement_score":0.13797504,"about_ca_system_score_codex":0.00022333962,"about_ca_system_score_gemma":0.0021404335,"threshold_uncertainty_score":0.9995881},"labels":[],"label_agreement":null},{"id":"W4411927841","doi":"10.1093/jacamr/dlaf106","title":"Understanding the mechanisms of resistance to azole antifungals in <i>Candida</i> species","year":2025,"lang":"en","type":"review","venue":"JAC-Antimicrobial Resistance","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"China Scholarship Council; Medical Research Council Canada; Department of Health and Social Care; Medical Research Council; National Institute for Health and Care Research","keywords":"Azole; Candida glabrata; Candida tropicalis; Candida auris; Candida parapsilosis; Candida albicans; Biology; Drug resistance; Microbiology; Antifungal drugs; Antifungal; Fluconazole; Systemic candidiasis; Corpus albicans","score_opus":0.08306615353683501,"score_gpt":0.33023403200472573,"score_spread":0.24716787846789073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411927841","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000764726,0.9661767,0.007354468,0.0011523763,0.0006728272,0.0038768721,0.0007405874,0.00009373281,0.019855984],"genre_scores_gemma":[0.008401319,0.92946553,0.0018436292,0.00075213227,0.00015147761,0.00010664422,0.00011197181,0.000110184585,0.059057135],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.9939558,0.00047360378,0.0022281364,0.0014138161,0.0008862108,0.0010424536],"domain_scores_gemma":[0.9953731,0.001245721,0.0008697746,0.002026202,0.00026103292,0.00022420762],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013349298,0.00096023164,0.0042795492,0.00074127805,0.00030526757,0.000109082226,0.0010380676,0.0006186857,0.000098040655],"category_scores_gemma":[0.0012573549,0.0007109867,0.0012175619,0.0030083854,0.0004675943,0.00013030897,0.00029212158,0.0011448974,0.00006371055],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0061579123,0.0015229016,0.0010822854,0.43546814,0.0016160335,0.0009056895,0.0015035779,0.0000150858805,0.009636948,0.1215462,0.4064665,0.014078704],"study_design_scores_gemma":[0.0009021474,0.00007409418,0.00051249453,0.13877197,0.0011512185,0.000010931219,0.00036306487,5.3247794e-7,0.0012430843,0.0014048527,0.85467553,0.0008901034],"about_ca_topic_score_codex":0.000027686967,"about_ca_topic_score_gemma":0.0034508177,"teacher_disagreement_score":0.448209,"about_ca_system_score_codex":0.0013005934,"about_ca_system_score_gemma":0.0017789557,"threshold_uncertainty_score":0.99953413},"labels":[],"label_agreement":null},{"id":"W4411977747","doi":"10.1038/s41467-025-60991-z","title":"Colistin enhances caspofungin antifungal efficacy against Aspergillus fumigatus by modulating calcium homeostasis and stress responses","year":2025,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; International Development Research Centre; National Institutes of Health; RIKEN; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Ministry of Education, Culture, Sports, Science and Technology; Fundação de Amparo à Pesquisa do Estado de São Paulo; Canadian Institutes of Health Research; Azrieli Foundation; Conselho Nacional de Desenvolvimento Científico e Tecnológico; National Natural Science Foundation of China; LifeArc; Canadian Institute for Advanced Research; GlaxoSmithKline","keywords":"Aspergillus fumigatus; Caspofungin; Colistin; Antifungal; Aspergillosis; Calcium; Microbiology; Antifungal drug; Homeostasis; Chemistry; Medicine; Voriconazole; Pharmacology; Antibiotics; Biology; Immunology; Internal medicine","score_opus":0.024855929088135758,"score_gpt":0.3533429680086072,"score_spread":0.32848703892047143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411977747","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91268367,0.07462303,0.00013855497,0.004673376,0.00013693114,0.0005176172,0.0005186806,0.00012870347,0.006579422],"genre_scores_gemma":[0.9910078,0.0038767403,0.0019131453,0.00082964374,0.00003583373,0.000029057544,0.0004232597,0.000019600317,0.0018648915],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983639,0.00026024607,0.00040170102,0.0004039756,0.0002545106,0.00031564833],"domain_scores_gemma":[0.9964555,0.0012418511,0.000112557966,0.0017487197,0.00029869718,0.00014267364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039293323,0.00022752603,0.00040825692,0.0001672928,0.0006302034,0.00006707823,0.00046298618,0.0003697777,0.000018681461],"category_scores_gemma":[0.0018548081,0.00020973496,0.00012971942,0.00062653935,0.00044951323,0.00010854597,0.00032281666,0.0012112244,0.000005587322],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020402654,0.002034028,0.5779413,0.0006825199,0.00074024405,0.000043026015,0.0013626515,0.000014416675,0.27749434,0.013762488,0.04621119,0.07767351],"study_design_scores_gemma":[0.0017285425,0.000111114576,0.9155988,0.00083554786,0.00028910034,0.00000833617,0.001353631,0.0010111292,0.029334767,0.00008796283,0.04923351,0.00040756215],"about_ca_topic_score_codex":0.00007274322,"about_ca_topic_score_gemma":0.00058618555,"teacher_disagreement_score":0.33765748,"about_ca_system_score_codex":0.00012697041,"about_ca_system_score_gemma":0.00023348632,"threshold_uncertainty_score":0.8552744},"labels":[],"label_agreement":null},{"id":"W4412091446","doi":"10.3390/jof11070507","title":"Recognizing the Early Risk-Based Clinical Manifestations of Mucormycosis: Cornerstones for Improved Survival and Therapeutic Outcomes","year":2025,"lang":"en","type":"editorial","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Allergan; Shionogi; Sick Kids Foundation; Astellas Pharma; Amplyx; Gilead Sciences","keywords":"Mucormycosis; Intensive care medicine; Medicine; Surgery","score_opus":0.04037365310697019,"score_gpt":0.3742983971959372,"score_spread":0.333924744088967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412091446","genre_codex":"editorial","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21723303,0.012928856,0.0046698814,0.001985501,0.7600279,0.0017035617,0.0010941637,0.00002799494,0.00032914965],"genre_scores_gemma":[0.5775391,0.013905129,0.006266032,0.00048184834,0.39685082,0.000041427033,0.00011417,0.00013010197,0.004671366],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99741966,0.0002721429,0.0013821197,0.00023114563,0.00049072184,0.00020421622],"domain_scores_gemma":[0.98501045,0.011454726,0.0016502197,0.00032995472,0.0014463214,0.000108356275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032362142,0.00023241957,0.0011326041,0.00015267647,0.0001263259,0.000032942353,0.00020997,0.00045319513,0.000011330201],"category_scores_gemma":[0.0060521183,0.0001365404,0.00077019,0.00012569809,0.00018439822,0.00005240913,0.00002499263,0.0011652032,5.885913e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011831054,0.0008631324,0.48479724,0.0018291563,0.003802509,0.000044515557,0.00032576776,0.0000024744909,0.0005142919,0.00005877882,0.41714612,0.07878497],"study_design_scores_gemma":[0.011377386,0.0053985594,0.81977725,0.0022108469,0.009683887,0.000012064108,0.0013751687,0.00038115852,0.00011116487,0.0010068383,0.1482095,0.00045619826],"about_ca_topic_score_codex":0.00005380644,"about_ca_topic_score_gemma":0.000114240356,"teacher_disagreement_score":0.36317703,"about_ca_system_score_codex":0.00006324677,"about_ca_system_score_gemma":0.0013019056,"threshold_uncertainty_score":0.7245388},"labels":[],"label_agreement":null},{"id":"W4412116165","doi":"10.1128/jcm.00796-25","title":"Accuracy of plasma cell-free DNA PCR for non-invasive diagnosis of mucormycosis","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Mucorales; Mucormycosis; Internal medicine; Medicine; Immunosuppression; Gastroenterology; Biomarker; Pathology; Biology","score_opus":0.04149573574072626,"score_gpt":0.3818507122863926,"score_spread":0.3403549765456664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412116165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949957,0.0006465089,0.0004808905,0.0021169798,0.0007374628,0.00035012024,0.00011409837,0.0000033257359,0.00055491686],"genre_scores_gemma":[0.9929844,0.0022885222,0.0035212757,0.0006768476,0.00018455874,0.0000058838286,0.000008323982,0.000009469956,0.00032071472],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968589,0.00015113613,0.0024771008,0.00021653199,0.00007169113,0.0002246397],"domain_scores_gemma":[0.98689705,0.009863641,0.0017064803,0.00044149283,0.000979379,0.00011197798],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0014848629,0.00014591494,0.0015199907,0.00015520345,0.000029836952,0.0000028379532,0.00037170268,0.0003704608,0.00009546018],"category_scores_gemma":[0.015978472,0.000104964005,0.0010111082,0.00016876456,0.00041146722,0.000053987616,0.000103106366,0.000417176,0.0000034005266],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005955085,0.0015462621,0.5227812,0.00091149146,0.00051026116,0.000013817879,0.00006896755,0.0000016503351,0.4106626,0.00008664798,0.04972642,0.007735631],"study_design_scores_gemma":[0.012294429,0.005686277,0.16054626,0.0012414037,0.0009279291,0.000038282924,0.00034179303,0.000010002905,0.79561013,0.0011395607,0.022011483,0.00015246117],"about_ca_topic_score_codex":0.000008590592,"about_ca_topic_score_gemma":0.00004497478,"teacher_disagreement_score":0.3849475,"about_ca_system_score_codex":0.000039174265,"about_ca_system_score_gemma":0.000914209,"threshold_uncertainty_score":0.99231035},"labels":[],"label_agreement":null},{"id":"W4412363265","doi":"10.1016/j.celrep.2025.115976","title":"White-Brown switching controls phenotypic plasticity and virulence of Candida auris","year":2025,"lang":"en","type":"article","venue":"Cell Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"LEO Fondet; Austrian Science Fund; ASEAN-European Academic University Network; European Society of Clinical Microbiology and Infectious Diseases; Canadian Institute for Advanced Research","keywords":"Biology; Virulence; Phenotypic switching; Candida auris; Morphogenesis; Phenotype; Adaptation (eye); Genetics; White (mutation); Gene; Fungal pathogen; Phenotypic plasticity; Antifungal drug; Fungus; Microbiology; Antifungal; Neuroscience; Botany","score_opus":0.007099587703218198,"score_gpt":0.24779016457483533,"score_spread":0.24069057687161713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412363265","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96951133,0.00079432246,0.0014678515,0.00011013113,0.000102630234,0.00024812357,0.000002301817,0.000025087553,0.027738225],"genre_scores_gemma":[0.9908356,0.00006536982,0.0002463596,0.00015637928,0.00002624963,0.00000520817,0.0000026585192,0.0000064252304,0.008655746],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989401,0.000015901682,0.00037845213,0.0003077655,0.00018262873,0.00017515746],"domain_scores_gemma":[0.99925303,0.00011446814,0.00014633678,0.00028889056,0.0001071022,0.00009014089],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025854184,0.000113183705,0.00036628655,0.000046267767,0.00006570228,0.000011065053,0.00003268042,0.00007689265,0.0001830215],"category_scores_gemma":[0.00034320707,0.00009389008,0.00006433348,0.0001207707,0.00008503677,0.00004800347,0.000029396375,0.00015058556,0.0000022686345],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025118198,0.00009800275,0.9103712,0.00049316545,0.00002948466,0.00023686534,0.00015029788,0.000006623665,0.08410566,0.000059879745,0.00070542505,0.0034922122],"study_design_scores_gemma":[0.00078163214,0.000113253176,0.95914316,0.00038495864,0.00018534348,0.00003497345,0.00015423693,0.00019990093,0.036483057,0.0006083812,0.0017850294,0.00012605182],"about_ca_topic_score_codex":0.00015459936,"about_ca_topic_score_gemma":0.0000891461,"teacher_disagreement_score":0.048771985,"about_ca_system_score_codex":0.000039891285,"about_ca_system_score_gemma":0.00019380584,"threshold_uncertainty_score":0.38287264},"labels":[],"label_agreement":null},{"id":"W4412488720","doi":"10.1111/hdi.70007","title":"Exploring Oral Candidiasis in Hemodialysis Patients: <i>Candida</i> Species and Associated Risk Factors","year":2025,"lang":"en","type":"article","venue":"Hemodialysis International","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Candida albicans; Dialysis; Hemodialysis; Internal medicine; Logistic regression; Candida glabrata; Gastroenterology; Antifungal; Microbiology; Dermatology; Biology","score_opus":0.03962186822456192,"score_gpt":0.2752546842705221,"score_spread":0.23563281604596015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412488720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992964,0.00006894735,0.00020046056,0.00033682163,0.0003537805,0.00017862872,0.00010284792,0.000042676198,0.0057517863],"genre_scores_gemma":[0.9974357,0.00066396734,0.0001300534,0.00020708896,0.000053783628,0.000031537023,0.00025885087,0.000012057914,0.001206959],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982503,0.00010381011,0.0004766859,0.00044250189,0.00046869394,0.00025802728],"domain_scores_gemma":[0.9990247,0.00025487487,0.00013992623,0.0002339803,0.00025231575,0.00009420354],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037486877,0.00020393604,0.00050757494,0.0005344053,0.00011059745,0.000072790244,0.00012863368,0.00009418534,0.000237949],"category_scores_gemma":[0.0015713167,0.00018322517,0.00021799402,0.00061159616,0.00010433655,0.00034043862,0.00008851885,0.00025389623,0.00000765988],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019791366,0.00030822094,0.9936606,0.000014171747,0.0003973794,0.0000059343392,0.0004676846,0.000023390126,0.0001719385,0.00012666074,0.0004083831,0.0042176843],"study_design_scores_gemma":[0.0019220694,0.0000318987,0.99380076,0.00007897228,0.00024634902,1.6967053e-7,0.00060168013,0.00059080205,0.0013125894,0.00015922038,0.0011112173,0.00014428241],"about_ca_topic_score_codex":0.0012859968,"about_ca_topic_score_gemma":0.0024262539,"teacher_disagreement_score":0.004544827,"about_ca_system_score_codex":0.00055896083,"about_ca_system_score_gemma":0.000091031376,"threshold_uncertainty_score":0.74717057},"labels":[],"label_agreement":null},{"id":"W4412556438","doi":"10.1038/s41467-025-62097-y","title":"Candida albicans Ssy1 is the extracellular sensor of gut microbiota-derived peptidoglycan fragments mediating invasive hyphal growth in the host","year":2025,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Stockholms Universitet; Ministry of Education, India; KU Leuven; Ministry of Education - Singapore; National Research Foundation; Nanyang Technological University; Concordia University; National Research Foundation Singapore; University of Exeter","keywords":"Peptidoglycan; Candida albicans; Microbiology; Commensalism; Host (biology); Extracellular; Biology; Gut flora; Bacteria; Cell biology; Immunology; Ecology; Genetics","score_opus":0.01703626301337795,"score_gpt":0.3023040785314531,"score_spread":0.2852678155180751,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412556438","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93621355,0.010287291,0.000032952998,0.04584104,0.00008534723,0.00091724814,0.00010421638,0.000019158517,0.0064991903],"genre_scores_gemma":[0.993551,0.0012819909,0.0011450975,0.0032662125,0.0000277605,0.00004372894,0.000093751616,0.00001055119,0.0005798916],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99856085,0.00035720292,0.00040443547,0.0002134706,0.00025223737,0.00021183139],"domain_scores_gemma":[0.99616116,0.0014420138,0.00016433896,0.0019116065,0.00028250262,0.000038390837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005865559,0.000151456,0.0002757675,0.000099140154,0.00033257197,0.000021455582,0.0010590804,0.0002274919,0.00003952843],"category_scores_gemma":[0.0012126567,0.00009392109,0.00013758049,0.0006691088,0.00045643025,0.000049091617,0.00021479,0.0013632824,0.0000051992492],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013601841,0.0006251839,0.41572,0.00019191488,0.00023461325,0.000009940238,0.012736373,0.0000010939824,0.55649084,0.006014873,0.0074024186,0.00043676852],"study_design_scores_gemma":[0.0010724994,0.0000568855,0.9620142,0.00036657983,0.00021189875,0.00000810349,0.01302697,0.00008009741,0.015586878,0.00025084012,0.0071756896,0.0001493839],"about_ca_topic_score_codex":0.0005691442,"about_ca_topic_score_gemma":0.005409644,"teacher_disagreement_score":0.5462942,"about_ca_system_score_codex":0.00010399868,"about_ca_system_score_gemma":0.00034087198,"threshold_uncertainty_score":0.592286},"labels":[],"label_agreement":null},{"id":"W4412557434","doi":"10.1128/mbio.02303-24","title":"Breaking down biofilms across critical priority fungal pathogens: proteomics and computational innovation for mechanistic insights and new target discovery","year":2025,"lang":"en","type":"review","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Biofilm; Proteomics; Cryptococcal meningitis; Antifungal; Identification (biology); Computational biology; Drug discovery; Antifungal drug; Biology; Microbiology; Bioinformatics; Bacteria; Human immunodeficiency virus (HIV); Immunology; Ecology","score_opus":0.0516308564336294,"score_gpt":0.381739456112607,"score_spread":0.3301085996789776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412557434","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00228365,0.8819755,0.11168815,0.00013352079,0.00026240776,0.0026031688,0.0009482912,0.000046607176,0.000058756108],"genre_scores_gemma":[0.0102660535,0.9247817,0.060120095,0.00043655685,0.00068711146,0.0002270512,0.0022145973,0.00007059254,0.0011962781],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99820167,0.000060738806,0.0006229362,0.0006116852,0.00021866155,0.00028432303],"domain_scores_gemma":[0.99873555,0.0005426804,0.00015905857,0.00021506447,0.00024803274,0.00009961656],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003519019,0.00032398035,0.001129297,0.0001255318,0.00023526471,0.00014850617,0.000067344736,0.00036526337,0.000005642652],"category_scores_gemma":[0.0013394145,0.00025966717,0.00014492727,0.0003654504,0.00016511988,0.0001811437,0.0001045933,0.00032846438,0.0000016196145],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004907109,0.00032937233,0.0010304276,0.17161526,0.00034792756,0.00008224237,0.00039907623,5.10585e-7,0.0003983592,0.12577076,0.0005773259,0.69895804],"study_design_scores_gemma":[0.007314563,0.0021385646,0.009657169,0.10791874,0.006001545,0.0005989649,0.00050852256,0.0014369669,0.0003072681,0.14160787,0.71892697,0.0035828687],"about_ca_topic_score_codex":0.000015733118,"about_ca_topic_score_gemma":0.000017048107,"teacher_disagreement_score":0.71834964,"about_ca_system_score_codex":0.00011784762,"about_ca_system_score_gemma":0.0009870981,"threshold_uncertainty_score":0.9999856},"labels":[],"label_agreement":null},{"id":"W4412596159","doi":"10.1128/aac.00427-25","title":"Osh2 mediates <i>Candida</i> species resistance to miltefosine by regulating zymosterol accumulation","year":2025,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Natural Science Foundation of China","keywords":"Biology; Miltefosine; Ergosterol; Microbiology; Drug resistance; Candida glabrata; Candida albicans; Biochemistry; Genetics","score_opus":0.01666207587808905,"score_gpt":0.29449306595713204,"score_spread":0.277830990079043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412596159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97251874,0.00016128503,0.00065154553,0.022971286,0.00011936492,0.00044025516,0.00003347169,0.000054717366,0.003049319],"genre_scores_gemma":[0.94598484,0.0005829175,0.0006531988,0.029088179,0.00009623003,0.000005490969,0.000058229667,0.000019526064,0.023511373],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9988289,0.000024130444,0.00031141026,0.00040386227,0.00015957234,0.0002721647],"domain_scores_gemma":[0.9994328,0.000041232746,0.00006842438,0.00026872737,0.000088336004,0.000100472564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014219322,0.00019681337,0.00033886966,0.00007233189,0.00017532693,0.000062376384,0.00008540914,0.000099392724,0.00012869557],"category_scores_gemma":[0.000040557126,0.00016981864,0.00007523646,0.00026677636,0.00008985139,0.00008814106,0.000034303008,0.00010324002,0.000008763278],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093016156,0.00014866794,0.2795713,0.00019685508,0.00008270509,0.0000040713167,0.0004191635,0.0000013662122,0.28734377,0.000074258154,0.42674372,0.0044839834],"study_design_scores_gemma":[0.0029019257,0.000093778144,0.583853,0.0005602382,0.00005911805,0.000002381205,0.000121287165,0.00004537577,0.13227944,0.00011144214,0.2797008,0.0002712312],"about_ca_topic_score_codex":0.00003225057,"about_ca_topic_score_gemma":0.00006576909,"teacher_disagreement_score":0.3042817,"about_ca_system_score_codex":0.000053925072,"about_ca_system_score_gemma":0.00003923077,"threshold_uncertainty_score":0.69250035},"labels":[],"label_agreement":null},{"id":"W4412650548","doi":"10.1093/jac/dkaf261","title":"Classifying patients with invasive fungal disease: towards a unified case definition?","year":2025,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Ambiguity; Antifungal; Computer science; Modalities; Artificial intelligence; Machine learning; Intensive care medicine; Medicine","score_opus":0.014887591848324918,"score_gpt":0.2663260540632606,"score_spread":0.25143846221493565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412650548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945049,0.00013962643,0.00074268563,0.002994518,0.0001635795,0.00025882194,0.000024127787,0.0000164943,0.0011552122],"genre_scores_gemma":[0.9934514,0.00022254264,0.0021019583,0.0037664606,0.000107810956,0.0000010157014,0.000010626993,0.000020393165,0.00031778408],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998799,0.00004786728,0.00046784815,0.0001891133,0.0002720635,0.00022409136],"domain_scores_gemma":[0.99857056,0.00006841069,0.00027805753,0.00022271114,0.0006809856,0.00017927519],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019490115,0.0001863664,0.00044060187,0.00018868325,0.00012596846,0.00004321373,0.000097134944,0.000085997075,0.00009717226],"category_scores_gemma":[0.00012998206,0.00013320913,0.00022390767,0.0003091452,0.00013689508,0.00016575721,0.000015918937,0.0003316878,0.0000034327768],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.021697264,0.001966438,0.9231771,0.0006648577,0.00075312884,0.0052218856,0.00039694816,0.000007872629,0.023498304,0.00026216733,0.016024124,0.0063298712],"study_design_scores_gemma":[0.01936482,0.0010612494,0.9437843,0.0022582947,0.00057978736,0.001079813,0.000360841,0.000009582722,0.02776855,0.00030783404,0.003035703,0.00038924578],"about_ca_topic_score_codex":0.000011605326,"about_ca_topic_score_gemma":0.000024768022,"teacher_disagreement_score":0.020607138,"about_ca_system_score_codex":0.00015368342,"about_ca_system_score_gemma":0.0009832709,"threshold_uncertainty_score":0.5432111},"labels":[],"label_agreement":null},{"id":"W4412720221","doi":"10.1097/01.jaa.0000000000000089","title":"Acute invasive fungal sinusitis in a new diagnosis of type 1 diabetes mellitus","year":2025,"lang":"en","type":"article","venue":"JAAPA","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital","funders":"","keywords":"Medicine; Diabetic ketoacidosis; Immunosuppression; Diabetes mellitus; Meningitis; Fluconazole; Sinusitis; Ketoacidosis; Malignancy; Intensive care medicine; Disease; Type 1 diabetes; Cellulitis; Type 2 Diabetes Mellitus; Sepsis; Brain abscess; Coronary artery disease; Surgery; Dermatology; Antifungal; Internal medicine; Abscess","score_opus":0.014265744567072913,"score_gpt":0.2849036004909245,"score_spread":0.2706378559238516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412720221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885852,0.0034938736,0.000009234514,0.0011259018,0.00014281069,0.00023879757,0.000012444667,0.000017893952,0.0063738637],"genre_scores_gemma":[0.99455184,0.001092284,0.00027670412,0.00064493384,0.000042922384,0.000008800459,0.000011248142,0.0000072120492,0.0033640317],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99915314,0.00003245174,0.00025410834,0.00021301552,0.00014521883,0.00020208131],"domain_scores_gemma":[0.99926525,0.00024169628,0.00004501459,0.00027896377,0.000094501025,0.0000745419],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011769625,0.00010139835,0.00035735124,0.000117903706,0.000019117882,0.0000065067693,0.000077186,0.00009209135,0.00025580183],"category_scores_gemma":[0.0004695651,0.00008920854,0.000088068926,0.0005019988,0.000068713896,0.000050859624,0.000041660325,0.0001408977,0.00003162114],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021939275,0.00013901824,0.97217935,0.00017756413,0.000093002185,0.000052716237,0.00022085501,5.6415587e-7,0.0067413715,0.00045033274,0.00853718,0.011188635],"study_design_scores_gemma":[0.0011401024,0.0002679047,0.925512,0.0006265207,0.00015994224,0.0000010748033,0.00015255183,0.000020005225,0.06825142,0.0011704799,0.0025963646,0.000101639365],"about_ca_topic_score_codex":0.00017195698,"about_ca_topic_score_gemma":0.0007007429,"teacher_disagreement_score":0.06151005,"about_ca_system_score_codex":0.00007371421,"about_ca_system_score_gemma":0.00049014395,"threshold_uncertainty_score":0.36378187},"labels":[],"label_agreement":null},{"id":"W4412814170","doi":"10.18280/ijdne.200618","title":"Molecular Detection, Sequencing, and Expression Analysis of ALS Genes in Clinical Candida spp. Isolates with Antifungal Resistance","year":2025,"lang":"en","type":"article","venue":"International Journal of Design & Nature and Ecodynamics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"University of Baghdad","keywords":"Biology; Antifungal; Gene; Microbiology; Genetics; Computational biology","score_opus":0.01058495173730058,"score_gpt":0.3105454192723433,"score_spread":0.29996046753504274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412814170","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9551472,0.004987572,0.0392396,0.0002756607,0.00013372515,0.00009013913,0.000009401698,0.0000033895387,0.000113304755],"genre_scores_gemma":[0.9939364,0.0019038374,0.0038366744,0.0001733813,0.000036655667,8.1434405e-7,0.0000045431234,0.0000058621154,0.00010178762],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99870723,0.00009387571,0.00064218044,0.0001905365,0.00026503718,0.00010113483],"domain_scores_gemma":[0.99867815,0.00023803175,0.00034417113,0.00011423802,0.0005627034,0.000062729254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007370954,0.00011175114,0.00045828774,0.00053789426,0.000027924729,0.000024458599,0.000107226035,0.00018838266,0.000006987875],"category_scores_gemma":[0.00027992346,0.000082287275,0.00012187835,0.00038636784,0.00010681552,0.00012398942,0.000025943646,0.00044753272,6.377889e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004503424,0.00013214207,0.89361,0.00007653764,0.0017802999,0.0002800008,0.00012822132,0.00087129127,0.09526662,0.00027451973,0.00007960601,0.0029973555],"study_design_scores_gemma":[0.002720237,0.00047793004,0.9436292,0.0012805546,0.0013342076,0.00008179009,0.00041327954,0.015567402,0.032816418,0.0012784929,0.0002084327,0.00019205478],"about_ca_topic_score_codex":0.000019579491,"about_ca_topic_score_gemma":0.00068096817,"teacher_disagreement_score":0.062450204,"about_ca_system_score_codex":0.00009468544,"about_ca_system_score_gemma":0.00020645253,"threshold_uncertainty_score":0.33555776},"labels":[],"label_agreement":null},{"id":"W4413009102","doi":"10.1159/000547799","title":"Role of a Therapeutic Drug Monitoring-Guided Strategy of Isavuconazole for Optimizing Efficacy/Safety Outcomes in Onco-Hematological Pediatric Patients: A Systematic Review","year":2025,"lang":"en","type":"review","venue":"Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Observational study; MEDLINE; Retrospective cohort study; Intensive care medicine; Randomized controlled trial; Cohort study; Internal medicine","score_opus":0.042806024219208705,"score_gpt":0.3786683147170755,"score_spread":0.3358622904978668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413009102","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001521045,0.9898142,0.000031855834,0.000032235257,0.00007556846,0.00824597,0.00006322221,0.00003140307,0.00018447026],"genre_scores_gemma":[0.0033101805,0.9953135,0.00039617365,0.00009332753,0.00004121869,0.00042950953,0.000059130733,0.00005076417,0.00030618176],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99568754,0.0002640691,0.0027380832,0.000546524,0.00041076186,0.00035300263],"domain_scores_gemma":[0.99591815,0.001567574,0.0012768118,0.0008413048,0.00031160054,0.00008452491],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000835861,0.0005674748,0.007456071,0.00024471385,0.00003276691,0.000008101409,0.00038424786,0.0003373981,0.000030139074],"category_scores_gemma":[0.0006924973,0.00037121784,0.0014778036,0.00061647437,0.00007441639,0.000043637152,0.000036990048,0.00033907386,0.000002501885],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010083808,0.0009102681,0.0056432714,0.9677195,0.0003564485,0.000001351732,0.00008413728,4.5306524e-7,0.0000030591732,0.000041279796,0.000048831338,0.025090544],"study_design_scores_gemma":[0.0045951363,0.00037659757,0.003449706,0.98184097,0.0064194207,0.0000046760388,0.00018800204,0.0000071632835,0.00008524747,0.00009056826,0.0023227292,0.00061981234],"about_ca_topic_score_codex":0.0000071199493,"about_ca_topic_score_gemma":0.0000017319604,"teacher_disagreement_score":0.024470732,"about_ca_system_score_codex":0.0002096394,"about_ca_system_score_gemma":0.0005614805,"threshold_uncertainty_score":0.999874},"labels":[],"label_agreement":null},{"id":"W4413104788","doi":"10.1093/mmy/myaf072","title":"Spectrum of clinically significant melanized fungi in NIH hospitalized patients and their antifungal susceptibility profiles","year":2025,"lang":"en","type":"article","venue":"Medical Mycology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institutes of Health","keywords":"Micafungin; Voriconazole; Microbiology; Amphotericin B; Terbinafine; Biology; Phaeohyphomycosis; Antifungal; Internal transcribed spacer; Itraconazole; Ribosomal RNA; Genetics","score_opus":0.008152657075625966,"score_gpt":0.28967741632952887,"score_spread":0.2815247592539029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413104788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935618,0.0002981968,0.00023037463,0.0022510272,0.00030398765,0.0009488919,0.000027180626,0.000040575826,0.002337947],"genre_scores_gemma":[0.9983153,0.00034236445,0.00022807962,0.00075628393,0.00004376727,0.000026273301,0.00003886812,0.000012109818,0.00023697478],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968857,0.0003916774,0.0012657655,0.0006299832,0.00037795407,0.00044889862],"domain_scores_gemma":[0.99789083,0.0010740133,0.0001804432,0.00043581316,0.00016403264,0.00025486574],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0018824541,0.00022883646,0.0011329855,0.00017246681,0.00004569374,0.000005915549,0.0002020838,0.00048027228,0.001016836],"category_scores_gemma":[0.0059082797,0.00016140658,0.00015703336,0.0004011314,0.0009280789,0.000039147617,0.0001684956,0.00057161396,0.000009039131],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024525204,0.0013370387,0.98508817,0.00032730636,0.00007144107,0.000038588067,0.00014263538,5.044301e-8,0.0041930056,0.00074180803,0.000732468,0.0048749703],"study_design_scores_gemma":[0.00526604,0.001292729,0.9887941,0.00021572961,0.00004621548,0.0000020720918,0.00018618618,0.00011514003,0.0017928884,0.0019477715,0.00021733652,0.00012378296],"about_ca_topic_score_codex":0.000099229605,"about_ca_topic_score_gemma":0.00022794641,"teacher_disagreement_score":0.00475346,"about_ca_system_score_codex":0.000088489476,"about_ca_system_score_gemma":0.0006207453,"threshold_uncertainty_score":0.99989635},"labels":[],"label_agreement":null},{"id":"W4413112632","doi":"10.1093/genetics/iyaf154","title":"Targeted loss of heterozygosity in <i>Candida albicans</i> using CRISPR-Cas9 reveals the functional impact of allelic variation","year":2025,"lang":"en","type":"article","venue":"Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Cambridge Arts Council; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Lauku atbalsta dienests; Canada Research Chairs; Methuselah Foundation; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Biology; Loss of heterozygosity; CRISPR; Genetics; Allele; Candida albicans; Genetic variation; Variation (astronomy); Gene","score_opus":0.024150543742557238,"score_gpt":0.32448329682086935,"score_spread":0.3003327530783121,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413112632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926515,0.0005717398,0.006072202,0.00015489497,0.000071533905,0.00024194011,0.000026591983,0.000004798986,0.00020477764],"genre_scores_gemma":[0.99897206,0.00008380374,0.00062969746,0.00013662186,0.000031968793,0.0000021657224,0.000012797518,0.000005345127,0.0001255371],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990753,0.00007827116,0.0003593059,0.00014808496,0.00019866743,0.00014037253],"domain_scores_gemma":[0.99927974,0.00008607232,0.00011372907,0.00030364646,0.00018552986,0.00003128721],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030816588,0.00008787379,0.00025177668,0.00007102224,0.0000357326,0.0000038529824,0.000066879715,0.000076729026,0.000087846485],"category_scores_gemma":[0.00013032525,0.000062183135,0.00012279852,0.00031279563,0.00010443273,0.000020490223,0.000031519365,0.000113756396,7.760303e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002817841,0.00010792218,0.81712914,0.00009408467,0.00007205127,0.0000016761113,0.0001621037,0.0011130222,0.18047133,0.000049229206,0.00031656184,0.00020106573],"study_design_scores_gemma":[0.00058376906,0.000104242405,0.9898874,0.00007675768,0.000072929084,0.0000021043966,0.000048269736,0.0013677173,0.007289878,0.0004814639,0.000041213825,0.000044242806],"about_ca_topic_score_codex":0.0003366262,"about_ca_topic_score_gemma":0.00020963099,"teacher_disagreement_score":0.17318146,"about_ca_system_score_codex":0.00011210385,"about_ca_system_score_gemma":0.00027123117,"threshold_uncertainty_score":0.25357547},"labels":[],"label_agreement":null},{"id":"W4413141259","doi":"10.1080/21505594.2025.2546067","title":"Intrinsic and extrinsic factors affecting the evolution of virulence in the HIV-associated opportunistic human fungal pathogen <i>Cryptococcus neoformans</i>","year":2025,"lang":"en","type":"article","venue":"Virulence","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Natural Science Foundation of China","keywords":"Virulence; Biology; Pathogen; Opportunistic pathogen; Human pathogen; Fungal pathogen; Microbiology; Virology; Virulence factor; Human immunodeficiency virus (HIV); Immunology; Genetics; Gene","score_opus":0.018027930439899264,"score_gpt":0.2830894534991048,"score_spread":0.26506152305920555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413141259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99623746,0.00061069557,0.0002996807,0.00024049918,0.00008134737,0.0007476945,0.000048016165,0.00003263363,0.0017019989],"genre_scores_gemma":[0.9994147,0.00010919356,0.0000127114,0.00021734144,0.000024064562,0.00002001288,0.000018015044,0.000008113792,0.00017585418],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99835354,0.0002409861,0.00043005132,0.00031515263,0.00033498142,0.00032526572],"domain_scores_gemma":[0.9986861,0.0005141956,0.00017359536,0.00046846672,0.000106379586,0.000051301497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012160164,0.00018446892,0.00031960863,0.00011941005,0.00030399451,0.000025122308,0.00025758127,0.00010762223,0.000017110058],"category_scores_gemma":[0.0007811186,0.00011031835,0.00008794403,0.00066896155,0.0003488208,0.00012749826,0.00009383799,0.00041634394,0.000005142247],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008982828,0.00016553834,0.9311859,0.00017006275,0.0000252061,0.000023116698,0.0014057963,0.0000016266866,0.059524555,0.003376511,0.00014811382,0.0038837434],"study_design_scores_gemma":[0.00055615907,0.00015121608,0.9921265,0.00047197586,0.00008709761,0.000004255203,0.0048117707,0.000092557195,0.00081325154,0.0006420454,0.00013668381,0.000106447296],"about_ca_topic_score_codex":0.00033901026,"about_ca_topic_score_gemma":0.00044835408,"teacher_disagreement_score":0.06094064,"about_ca_system_score_codex":0.0002072908,"about_ca_system_score_gemma":0.00020328363,"threshold_uncertainty_score":0.44986516},"labels":[],"label_agreement":null},{"id":"W4413179746","doi":"10.3389/fphar.2025.1632488","title":"Unveiling the hidden risk of caspofungin: insights from three adverse event reporting systems and network pharmacology integration","year":2025,"lang":"en","type":"article","venue":"Frontiers in Pharmacology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Adverse Event Reporting System; Pharmacovigilance; Caspofungin; Adverse effect; Medicine; Database; Pharmacology; Odds ratio; Internal medicine; Fluconazole; Antifungal; Computer science","score_opus":0.014006166307359165,"score_gpt":0.309759629335066,"score_spread":0.29575346302770683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413179746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95485175,0.021894712,0.015287235,0.00039202903,0.0058962028,0.0009261486,0.00001108013,0.000029550729,0.0007113236],"genre_scores_gemma":[0.99653125,0.001214416,0.001153557,0.00040225,0.00036744872,0.00006171519,0.000019224717,0.000011469214,0.00023866433],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99767125,0.00037688247,0.0011230969,0.00039419663,0.00014272422,0.00029185845],"domain_scores_gemma":[0.9984629,0.00035440602,0.00077394146,0.00021772235,0.00012383125,0.000067167166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009361702,0.00017745189,0.0006551734,0.0001487302,0.0001303974,0.0000056770136,0.00012867236,0.00017689985,0.00005121741],"category_scores_gemma":[0.00027392525,0.00012888461,0.00012674154,0.00038618868,0.00026169245,0.00007045231,0.000082649036,0.00056252995,0.0000016789784],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001529966,0.00011840393,0.9295384,0.00014530424,0.00074799196,0.00012792603,0.000603953,0.00125293,0.014910781,0.0001867824,0.04306895,0.007768553],"study_design_scores_gemma":[0.0064244317,0.000291923,0.8315706,0.000531255,0.002855228,0.00001911412,0.0057500135,0.1283575,0.010750932,0.004561983,0.008543019,0.00034397247],"about_ca_topic_score_codex":0.00043430034,"about_ca_topic_score_gemma":0.00032200708,"teacher_disagreement_score":0.12710457,"about_ca_system_score_codex":0.00019148833,"about_ca_system_score_gemma":0.00022159939,"threshold_uncertainty_score":0.52557623},"labels":[],"label_agreement":null},{"id":"W4413258197","doi":"10.1038/s41467-025-62642-9","title":"Author Correction: Colistin enhances caspofungin antifungal efficacy against Aspergillus fumigatus by modulating calcium homeostasis and stress responses","year":2025,"lang":"en","type":"erratum","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Aspergillus fumigatus; Caspofungin; Colistin; Antifungal; Aspergillosis; Microbiology; Calcium; Biology; Medicine; Voriconazole; Immunology; Antibiotics; Internal medicine","score_opus":0.030905045287439866,"score_gpt":0.35587877457051925,"score_spread":0.3249737292830794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413258197","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07935708,0.73993605,0.00031710858,0.0205124,0.035056796,0.0041941,0.012288472,0.0010675625,0.10727043],"genre_scores_gemma":[0.7048316,0.014833932,0.0009397586,0.0006166983,0.00050025375,0.00008445577,0.0074775536,0.00007132861,0.27064443],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99627733,0.00063823303,0.000868554,0.00096266245,0.00066992023,0.0005832966],"domain_scores_gemma":[0.99294746,0.001974126,0.00045558656,0.00349172,0.00081584544,0.00031528375],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00066076085,0.000660226,0.001167123,0.0004067904,0.0012201209,0.00016845518,0.0009710425,0.0021485782,0.000060609003],"category_scores_gemma":[0.004768104,0.0006387604,0.00038017344,0.001022989,0.00072202436,0.00014471341,0.00066515384,0.0065382123,0.000011173981],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046543955,0.0004501354,0.0051861987,0.00047301195,0.00033513553,0.000023045272,0.00028753572,0.0000019975546,0.0014189299,0.00020739585,0.9784686,0.012682587],"study_design_scores_gemma":[0.0009949328,0.00018511862,0.100729145,0.0034657049,0.00081754656,0.000027429094,0.001026421,0.0012923472,0.0013672112,0.000016438551,0.8892647,0.0008129951],"about_ca_topic_score_codex":0.00018694683,"about_ca_topic_score_gemma":0.0019726143,"teacher_disagreement_score":0.7251021,"about_ca_system_score_codex":0.00042699603,"about_ca_system_score_gemma":0.0012039201,"threshold_uncertainty_score":0.9996064},"labels":[],"label_agreement":null},{"id":"W4413425595","doi":"10.1038/s41467-025-62953-x","title":"Coordinated regulation of pH alkalinization by two transcription factors promotes fungal commensalism and pathogenicity","year":2025,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"University of California, San Francisco; State Key Laboratory of Pathogen and Biosecurity; National Natural Science Foundation of China; Natural Science Foundation of Shanghai","keywords":"Candida albicans; Transcription factor; Biology; Commensalism; Mutant; Regulator; Corpus albicans; Cell biology; Microbiology; Phenotype; Phagolysosome; Gene; Effector; Regulation of gene expression; Genetics; Bacteria; Phagosome; Intracellular","score_opus":0.01741855896471711,"score_gpt":0.31724745722897785,"score_spread":0.29982889826426073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413425595","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9848904,0.0058052926,0.0015823785,0.005578812,0.0000728989,0.00057206885,0.00012340015,0.00007348588,0.001301287],"genre_scores_gemma":[0.99700165,0.0003769644,0.0010388937,0.00026166043,0.000007422826,0.000010292402,0.0009465858,0.000008987679,0.00034753486],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990967,0.00016903585,0.0003159999,0.00017950582,0.00013597403,0.00010281204],"domain_scores_gemma":[0.998424,0.00019896362,0.00011328434,0.0008266997,0.00039092044,0.000046136058],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027922238,0.000113717884,0.00023882804,0.000097809985,0.00019817385,0.000013190946,0.00017409422,0.00024851644,0.00001563172],"category_scores_gemma":[0.0003209158,0.00010305206,0.0000651781,0.00044534274,0.00020800474,0.00010873544,0.00005383842,0.00047611588,5.6535504e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001419413,0.00044118793,0.43142703,0.00012936875,0.00009024229,1.7975262e-7,0.00054325897,0.0000011851553,0.54650563,0.014589875,0.0037513669,0.002378704],"study_design_scores_gemma":[0.0013766369,0.000086432374,0.9487173,0.00018555387,0.00024759016,0.0000020224327,0.00034312555,0.0018451947,0.04119385,0.0011808207,0.0046893186,0.00013213103],"about_ca_topic_score_codex":0.000061969506,"about_ca_topic_score_gemma":0.0002720555,"teacher_disagreement_score":0.5172903,"about_ca_system_score_codex":0.000056943012,"about_ca_system_score_gemma":0.00006531897,"threshold_uncertainty_score":0.42023408},"labels":[],"label_agreement":null},{"id":"W4413686120","doi":"10.1111/myc.70104","title":"Appearance of Environment‐Linked Azole Resistance in the <i>Aspergillus fumigatus</i> Complex in New Zealand","year":2025,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Environment Research Council; Medical Research Council; Wellcome Trust; Canadian Institute for Advanced Research","keywords":"Azole; Aspergillus fumigatus; Genotyping; Microbiology; Biology; Fungicide; Genotype; Aspergillus; Gene; Genetics; Antifungal; Horticulture","score_opus":0.01911733449853634,"score_gpt":0.2755547618958864,"score_spread":0.25643742739735004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413686120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9811766,0.004320018,0.000032606244,0.0028925226,0.000033303797,0.00038297783,0.000012633738,0.000012159389,0.011137147],"genre_scores_gemma":[0.9908483,0.00050344085,0.00023644342,0.0009946646,0.000025168907,0.000007650962,0.000012958659,0.000006297091,0.007365093],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988858,0.000078465855,0.00034756825,0.00024192742,0.0002251072,0.00022113693],"domain_scores_gemma":[0.99934494,0.00011342978,0.000055039538,0.00043666025,0.000014087706,0.00003580963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030352967,0.000116072806,0.00032543144,0.000076718046,0.000030831397,0.000007593761,0.00016857262,0.00006459937,0.0000708584],"category_scores_gemma":[0.0001053955,0.0000846027,0.000064480155,0.00033558824,0.00013403167,0.000042538035,0.00003064787,0.00020190855,0.000014447722],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012132202,0.00036804576,0.95687914,0.00028232328,0.000020288562,0.0000484279,0.0012227675,0.000020108104,0.02047429,0.0016785288,0.016239202,0.0015536766],"study_design_scores_gemma":[0.0016921995,0.000038801085,0.9397008,0.00037803344,0.000015011606,7.4330325e-7,0.0003431001,0.000018445062,0.0009837291,0.0011979481,0.055562276,0.000068926885],"about_ca_topic_score_codex":0.00032890995,"about_ca_topic_score_gemma":0.0028713893,"teacher_disagreement_score":0.039323077,"about_ca_system_score_codex":0.00006477257,"about_ca_system_score_gemma":0.0001226479,"threshold_uncertainty_score":0.34499982},"labels":[],"label_agreement":null},{"id":"W4413802664","doi":"10.1111/hdi.70022","title":"Commentary on “Exploring Oral Candidiasis in Hemodialysis Patients: Candida Species and Associated Risk Factors”","year":2025,"lang":"en","type":"letter","venue":"Hemodialysis International","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Hemodialysis; Medicine; Intensive care medicine; Internal medicine","score_opus":0.031587618998489254,"score_gpt":0.2699587632105733,"score_spread":0.23837114421208408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413802664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84405124,0.000053241485,0.000022155271,0.15029092,0.0009264204,0.0003940293,0.0016010159,0.000053943717,0.002607045],"genre_scores_gemma":[0.79328597,0.0007698122,0.00005648567,0.19378987,0.0010255823,0.00007222168,0.00855753,0.00004089951,0.0024016134],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964814,0.00028821692,0.00077629084,0.00086364406,0.001128648,0.00046178137],"domain_scores_gemma":[0.9979851,0.0007508205,0.00036251405,0.0004806278,0.00031466145,0.00010623615],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038601365,0.0005229517,0.001156563,0.0010334457,0.00015314808,0.00011766031,0.0002754031,0.0005276784,0.0006054217],"category_scores_gemma":[0.0012306968,0.00047476275,0.00048468693,0.00046532016,0.0001484395,0.0002142398,0.00015309452,0.0017168864,0.000012925324],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001641459,0.00022042116,0.6149624,0.000044196848,0.00086133624,0.000065685366,0.00022344034,0.00001018686,0.0000036845638,0.0000033472088,0.38252893,0.0009121987],"study_design_scores_gemma":[0.0029694336,0.0001397421,0.8343355,0.0004987622,0.0010286348,4.9473874e-7,0.00021171608,0.00029601404,0.00019356013,0.000093993745,0.15971676,0.0005153571],"about_ca_topic_score_codex":0.004695135,"about_ca_topic_score_gemma":0.0033106941,"teacher_disagreement_score":0.22281218,"about_ca_system_score_codex":0.0018402324,"about_ca_system_score_gemma":0.0001333197,"threshold_uncertainty_score":0.9997704},"labels":[],"label_agreement":null},{"id":"W4413848852","doi":"10.1007/s11046-025-00988-w","title":"Genotypic and Phenotypic Investigation of Clinical Aspergillus isolates from Iran Indicates Nosocomial Transmission Events of Aspergillus flavus","year":2025,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Aspergillosis; Aspergillus flavus; Biology; Aspergillus; Microbiology; Genotyping; Amphotericin B; Aspergillus fumigatus; Itraconazole; Genotype; Immunology; Genetics; Antifungal","score_opus":0.0334117489666728,"score_gpt":0.33003226511242345,"score_spread":0.29662051614575063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413848852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949628,0.0023165778,0.0011281818,0.00027581828,0.00019364014,0.00039309298,0.000037152295,0.00003886043,0.00065385597],"genre_scores_gemma":[0.99510795,0.0004454493,0.003934127,0.00018721787,0.000058269005,0.000006476584,0.000055742934,0.000012117475,0.0001926697],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99793494,0.00023856148,0.000979019,0.00044730728,0.00020243785,0.00019771115],"domain_scores_gemma":[0.9987806,0.0003561706,0.00027756902,0.0003471334,0.00011864403,0.00011984829],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072942075,0.00018785047,0.0007902742,0.0001249352,0.00007010016,0.000004672128,0.00013794411,0.0003457966,0.0001036708],"category_scores_gemma":[0.0005743152,0.00014847411,0.00017305161,0.00025925998,0.00044826607,0.00006706717,0.00006532363,0.0003209338,0.000007280171],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011274999,0.00012765695,0.7895686,0.00021175743,0.000053424577,0.000009158728,0.0004418729,0.0000013300349,0.18668815,0.000110366374,0.000075946766,0.02158422],"study_design_scores_gemma":[0.0019380082,0.00040639678,0.95296514,0.00037614763,0.00020184046,0.00000223055,0.00016526852,0.0001356916,0.040624626,0.0029979032,0.000080240105,0.0001065103],"about_ca_topic_score_codex":0.00012553779,"about_ca_topic_score_gemma":0.000024505627,"teacher_disagreement_score":0.16339652,"about_ca_system_score_codex":0.000028924633,"about_ca_system_score_gemma":0.00017708482,"threshold_uncertainty_score":0.60545987},"labels":[],"label_agreement":null},{"id":"W4413901804","doi":"10.1186/s13223-025-00985-0","title":"Duo biologic therapy using mepolizumab and omalizumab in refractory ABPA: two cases","year":2025,"lang":"en","type":"article","venue":"Allergy Asthma and Clinical Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Mepolizumab; Omalizumab; Medicine; Exacerbation; Allergic bronchopulmonary aspergillosis; Adverse effect; Refractory (planetary science); Concomitant; Dupilumab; Intensive care medicine; Benralizumab; Asthma; Internal medicine; Immunology; Dermatology; Eosinophil; Antibody; Immunoglobulin E","score_opus":0.05225185464108357,"score_gpt":0.3943757425971287,"score_spread":0.34212388795604515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413901804","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97648346,0.020715024,0.000036409823,0.0007507899,0.00024021236,0.000177168,0.0000019702977,0.00003170989,0.0015632369],"genre_scores_gemma":[0.978823,0.019405527,0.0002060858,0.0009936873,0.000053115342,0.000006303873,0.000007978199,0.000009147621,0.00049514684],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9981746,0.0003189361,0.0006247313,0.0005023177,0.00006121472,0.00031821866],"domain_scores_gemma":[0.99863195,0.00081083033,0.00009846625,0.00033273862,0.000058909518,0.000067120236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039871415,0.00018448691,0.0006345673,0.00011736875,0.000109778615,0.000011637574,0.00008226297,0.00035702382,0.00010124751],"category_scores_gemma":[0.00056180416,0.00014235056,0.00010644959,0.00016093146,0.00087668217,0.000052944866,0.00011128106,0.0004717758,0.000004812384],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008557212,0.0012244727,0.7708004,0.000036163292,0.0009278472,0.0007573455,0.00015223157,9.615297e-7,0.011053031,0.007836874,0.00012691274,0.19852653],"study_design_scores_gemma":[0.0054742,0.0014575552,0.9756439,0.00010205139,0.000019089523,0.00016155928,0.00041726368,0.000102674574,0.00012592967,0.0011436441,0.015204065,0.00014807668],"about_ca_topic_score_codex":0.00069221243,"about_ca_topic_score_gemma":0.0012063251,"teacher_disagreement_score":0.20484348,"about_ca_system_score_codex":0.000045607096,"about_ca_system_score_gemma":0.00016531059,"threshold_uncertainty_score":0.58048874},"labels":[],"label_agreement":null},{"id":"W4413920237","doi":"10.1016/j.cmi.2025.08.024","title":"‘Survival and quality-of-life in mucormycosis’—author's reply","year":2025,"lang":"en","type":"letter","venue":"Clinical Microbiology and Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ciena (Canada)","funders":"","keywords":"Mucormycosis; Quality of life (healthcare); Intensive care medicine; Medicine; Surgery; Nursing","score_opus":0.09503628573886629,"score_gpt":0.4092668733727619,"score_spread":0.3142305876338956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413920237","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8693051,0.0010413824,0.00008284026,0.12673016,0.0011792451,0.0003818484,0.00004164259,0.00003055161,0.0012072689],"genre_scores_gemma":[0.611217,0.004192417,0.00010576573,0.37970793,0.0012427677,0.000015386622,0.00047508947,0.000018952655,0.003024657],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99717605,0.0007360152,0.0012386292,0.0006002716,0.00003691813,0.00021211202],"domain_scores_gemma":[0.9977963,0.0014167525,0.0003153319,0.00031022908,0.00010535832,0.000056036657],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0018414548,0.00020225091,0.0011883085,0.00015146822,0.000048892565,0.0000060865705,0.000040374536,0.0016705922,0.000043890293],"category_scores_gemma":[0.0031414856,0.00016956616,0.0001917966,0.00013225652,0.00063197594,0.000036511694,0.00007812316,0.0019423516,0.0000060941707],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005421541,0.00010447675,0.8718554,0.00095077424,0.000095271665,0.00000710138,0.000012293165,2.2016495e-8,0.0014941653,0.00007890062,0.1229755,0.0018839792],"study_design_scores_gemma":[0.0012927962,0.00045193022,0.69094145,0.0003526639,0.00010098797,0.000009259618,0.000011944069,0.000001399329,0.00004782152,0.00018029293,0.30646366,0.00014582406],"about_ca_topic_score_codex":0.00029775448,"about_ca_topic_score_gemma":0.00024953653,"teacher_disagreement_score":0.25808805,"about_ca_system_score_codex":0.00003084418,"about_ca_system_score_gemma":0.00016679485,"threshold_uncertainty_score":0.99962544},"labels":[],"label_agreement":null},{"id":"W4413946392","doi":"10.1128/spectrum.02042-25","title":"First report of infections due to <i>Candidozyma</i> (formerly <i>Candida</i> ) <i>auris</i> in Botswana, 2022–2024","year":2025,"lang":"en","type":"letter","venue":"Microbiology Spectrum","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto; University of British Columbia","funders":"Centers for Disease Control and Prevention","keywords":"Candida auris; Biology; Microbiology; Antifungal","score_opus":0.006308443719720362,"score_gpt":0.24629736694743998,"score_spread":0.2399889232277196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413946392","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07220092,0.0014928465,0.00041621298,0.89053243,0.0037917818,0.0027050565,0.001504592,0.0001658564,0.027190285],"genre_scores_gemma":[0.0798554,0.00068388105,0.0005456348,0.71996796,0.0027842892,0.00031472166,0.0038445487,0.00018536627,0.19181821],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9956427,0.00014927749,0.001524511,0.0013807219,0.00020153115,0.0011012477],"domain_scores_gemma":[0.997474,0.00029610333,0.00043417115,0.0015009125,0.0001536337,0.00014115783],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0005780322,0.00069551147,0.002070906,0.00094962015,0.00015303634,0.000022249695,0.0003947843,0.0016778868,0.0008376586],"category_scores_gemma":[0.000290054,0.0006475397,0.0005950874,0.0012762682,0.00041937808,0.00006442285,0.00023183768,0.0030202107,0.00016181987],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024002469,0.00023203716,0.04017208,0.0008476443,0.00024392261,0.0060190884,0.00007195543,0.0000021223934,0.0121155735,0.000022621034,0.93997073,0.00006220846],"study_design_scores_gemma":[0.0010107642,0.00070942723,0.004509427,0.0009247275,0.00027926013,0.0024029224,0.000039334624,7.903378e-7,0.006609337,0.00023083338,0.98275477,0.0005284257],"about_ca_topic_score_codex":0.001936236,"about_ca_topic_score_gemma":0.0150329815,"teacher_disagreement_score":0.1705645,"about_ca_system_score_codex":0.00059914635,"about_ca_system_score_gemma":0.0010579673,"threshold_uncertainty_score":0.9996182},"labels":[],"label_agreement":null},{"id":"W4414023025","doi":"10.3390/jof11090656","title":"The Prognostic Value of (1→3)-β-D-Glucan in COVID-19 Patients with and Without Secondary Fungal Disease","year":2025,"lang":"en","type":"article","venue":"Journal of Fungi","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Coronavirus disease 2019 (COVID-19); Value (mathematics); Disease; Microbiology; Glucan; 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Medicine; Biology; Internal medicine; Virology; Mathematics; Infectious disease (medical specialty); Statistics; Biochemistry; Outbreak","score_opus":0.0075840689792573855,"score_gpt":0.28282620849095486,"score_spread":0.27524213951169746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414023025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99259514,0.0054117055,0.00012085117,0.0010616028,0.00008084344,0.0002831981,0.0000106308,0.0000032879764,0.0004327546],"genre_scores_gemma":[0.9988131,0.00026931983,0.00015179075,0.00044748685,0.000027779171,0.000002150118,0.0000018065947,0.000006007361,0.00028056902],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989438,0.00008028113,0.00040829685,0.00011073823,0.0003094366,0.00014745141],"domain_scores_gemma":[0.99887854,0.00029193476,0.00021302639,0.00016684094,0.0002101972,0.00023943951],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005142404,0.00009419006,0.00028732457,0.000109554196,0.000067381865,0.000017151071,0.00008294894,0.000034239583,0.000017931854],"category_scores_gemma":[0.000978131,0.000051713687,0.000064956555,0.00018705615,0.00016629268,0.0000969156,0.000024163619,0.00027539267,3.956573e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0046893996,0.00021167962,0.9881564,0.00032175024,0.00007395864,0.0000404298,0.00012449487,0.0000060876714,0.000083484236,0.0002004324,0.00048679372,0.00560511],"study_design_scores_gemma":[0.002851192,0.0004534759,0.99437815,0.00057278876,0.00015719548,0.000007648628,0.00024234527,0.000039519196,0.000038955633,0.00043799722,0.0007724717,0.000048233254],"about_ca_topic_score_codex":0.000011075846,"about_ca_topic_score_gemma":0.000066162196,"teacher_disagreement_score":0.006221798,"about_ca_system_score_codex":0.00009408874,"about_ca_system_score_gemma":0.0012559006,"threshold_uncertainty_score":0.22279137},"labels":[],"label_agreement":null},{"id":"W4414082528","doi":"10.1128/mbio.01419-25","title":"Epistasis at the cell surface: what is the role of Erg3 loss-of-function in acquired echinocandin resistance?","year":2025,"lang":"en","type":"article","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; PROTEO","funders":"","keywords":"Echinocandin; Drug resistance; Sterol; Epistasis; Mutation; Gene; Resistance mutation; Phenotype","score_opus":0.009372253662492223,"score_gpt":0.26016602818424206,"score_spread":0.25079377452174983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414082528","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97273403,0.014007798,0.000044985427,0.0028832173,0.00014616667,0.00035743648,0.000019959913,0.000010685734,0.009795699],"genre_scores_gemma":[0.97917014,0.00094338326,0.000036647685,0.00042170638,0.000015370946,0.0000055049813,0.000009767083,0.000007676566,0.0193898],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988771,0.00010123564,0.00035566706,0.0002330337,0.00024980435,0.00018313118],"domain_scores_gemma":[0.99889207,0.00021785958,0.000116923,0.0006534067,0.000092333576,0.000027422038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005701485,0.00011505766,0.00028000024,0.00004258192,0.00010084729,0.000015320022,0.00015251237,0.000095027644,0.0002656236],"category_scores_gemma":[0.00006683073,0.00006646853,0.00013768602,0.0004278341,0.00028677177,0.00008065767,0.00006463294,0.0001182821,0.000014111698],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035086581,0.00028582205,0.88478386,0.00045790581,0.00009055533,0.000006071887,0.001996216,0.000012825081,0.09306732,0.001253854,0.009291189,0.0052457135],"study_design_scores_gemma":[0.0013339159,0.0001229643,0.5280655,0.0005585803,0.00016535848,6.7190814e-7,0.0056248102,0.000070671296,0.42768398,0.004863281,0.03138493,0.00012530705],"about_ca_topic_score_codex":0.00025412935,"about_ca_topic_score_gemma":0.002181592,"teacher_disagreement_score":0.35671833,"about_ca_system_score_codex":0.00013546803,"about_ca_system_score_gemma":0.00011630335,"threshold_uncertainty_score":0.29083923},"labels":[],"label_agreement":null},{"id":"W4414281487","doi":"10.1101/2025.09.15.676225","title":"Body temperature drives azole tolerance in <i>Candida albicans</i> by hindering the autophagic degradation of Erg11","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"National Key Research and Development Program of China; Shanghai Municipal Education Commission; National Natural Science Foundation of China","keywords":"Autophagy; Degradation (telecommunications); Azole; Endoplasmic reticulum; Mitochondrion; Reactive oxygen species; Oxygen","score_opus":0.007302515856985555,"score_gpt":0.2303121827687583,"score_spread":0.22300966691177276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414281487","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99233407,0.0048701754,0.00024076653,0.00067123683,0.00047512972,0.0009674676,0.00026797096,0.00011746272,0.000055747485],"genre_scores_gemma":[0.9978302,0.000730259,0.0005484288,0.00045969247,0.00012936053,0.00011591447,0.0000018000851,0.000042646523,0.00014167672],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99735844,0.00015363857,0.0007258701,0.0008466763,0.0004785304,0.00043684183],"domain_scores_gemma":[0.99773103,0.00011292886,0.00034222807,0.0013226684,0.00035680545,0.00013434676],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00059697585,0.00046185544,0.0008240329,0.00017980325,0.00012327309,0.00007009723,0.00044518034,0.0005174914,0.000041768082],"category_scores_gemma":[0.0002610543,0.00038077316,0.00019512964,0.0006729563,0.00020895807,0.00011860559,0.00022326717,0.0012288751,0.000004358367],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016402685,0.00023452609,0.12315915,0.0011613916,0.00010862544,0.000026020742,0.00003547213,0.000075684286,0.87373024,0.0002635746,0.0010355549,0.0000057072725],"study_design_scores_gemma":[0.0008701417,0.000050482096,0.5935158,0.0017739473,0.00013495232,1.563954e-8,0.000020121714,0.000424058,0.40066218,0.0000028140792,0.002165251,0.00038020074],"about_ca_topic_score_codex":0.00020981782,"about_ca_topic_score_gemma":0.00004240767,"teacher_disagreement_score":0.4730681,"about_ca_system_score_codex":0.00030367,"about_ca_system_score_gemma":0.0010158828,"threshold_uncertainty_score":0.9998644},"labels":[],"label_agreement":null},{"id":"W4414299478","doi":"10.3389/fimmu.2025.1620545","title":"Immune-modulating therapy with granulocyte-macrophage colony-stimulating factor (GM-CSF) in refractory rhino-orbital-cerebral mucormycosis – a case report","year":2025,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"","keywords":"Mucormycosis; Refractory (planetary science); Antifungal; Salvage therapy; Therapeutic approach; Mycosis; Combination therapy","score_opus":0.01215193053324457,"score_gpt":0.2802821507900958,"score_spread":0.2681302202568512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414299478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869993,0.0070215296,0.0018167442,0.00021277694,0.0007868467,0.0009951817,0.0000127433295,0.00010084551,0.0020540443],"genre_scores_gemma":[0.9912989,0.00017332274,0.006744562,0.00019591642,0.000034068325,0.00008111964,0.00004217771,0.000043866392,0.0013860774],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9968265,0.00025829178,0.0011260691,0.0008052458,0.00023827818,0.0007455957],"domain_scores_gemma":[0.9983077,0.00020792524,0.00032425133,0.0009284795,0.00016047439,0.00007114415],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005979483,0.00039860074,0.0011338295,0.00060561596,0.00019669988,0.00003074191,0.00019570958,0.000431569,0.00008308065],"category_scores_gemma":[0.0006934015,0.00034731356,0.00017470763,0.0008540292,0.0004021476,0.0002455778,0.0001025217,0.0010878568,0.0000046625705],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036402808,0.00043015816,0.93387663,0.00010342237,0.00025665745,0.034327835,0.0009670224,0.000042567863,0.010721485,0.000033038745,0.00018650998,0.015414385],"study_design_scores_gemma":[0.007706723,0.00090148277,0.97851825,0.00046677914,0.000052499927,0.0032665625,0.0028959871,0.0022435975,0.0027261027,0.00023658074,0.0005421896,0.00044325876],"about_ca_topic_score_codex":0.0020949768,"about_ca_topic_score_gemma":0.00076184835,"teacher_disagreement_score":0.0446416,"about_ca_system_score_codex":0.0007675819,"about_ca_system_score_gemma":0.0004128285,"threshold_uncertainty_score":0.9998979},"labels":[],"label_agreement":null},{"id":"W4414302770","doi":"10.1016/j.mmcr.2025.100727","title":"Rasamsonia argillacea brain abscess in a lung transplant recipient: an unexpected infection by an unusual fungal pathogen","year":2025,"lang":"en","type":"article","venue":"Medical Mycology Case Reports","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de Santé Publique du Québec; Université de Montréal; Montreal General Hospital","funders":"bioMérieux","keywords":"Brain abscess; Lung; Lung abscess; Pathogen; Abscess; Aspergillus; Pathogenic organism","score_opus":0.008824023353480497,"score_gpt":0.3238312586103249,"score_spread":0.31500723525684443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414302770","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944493,0.0005472131,0.0009894692,0.0014279116,0.00067629264,0.0007021285,0.000028377062,0.00015614115,0.0010231746],"genre_scores_gemma":[0.9974514,0.00010539137,0.00004580366,0.0013232768,0.00013443171,0.00008388904,0.00033586702,0.000022823306,0.0004970729],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9963598,0.0005684522,0.001018907,0.0009131094,0.00055908726,0.00058063166],"domain_scores_gemma":[0.9981743,0.00031195336,0.00017298435,0.0005997368,0.00013831563,0.00060267665],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002078495,0.0002804543,0.00071495,0.00030049114,0.00016591967,0.000017515365,0.00006498634,0.0007509129,0.0005483842],"category_scores_gemma":[0.0017064239,0.0002454227,0.00012282866,0.00068929495,0.00029475958,0.00014888299,0.00003717531,0.00080317934,0.0000038007902],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008493144,0.0012312593,0.68901074,0.0001993579,0.00007412771,0.28745252,0.0005224221,0.0000032052606,0.013368017,0.00006215913,0.002541881,0.004684991],"study_design_scores_gemma":[0.004081274,0.001165585,0.89454883,0.0005536925,0.00030435974,0.08775728,0.00041411968,0.0025389916,0.0023237416,0.00026677334,0.0055513764,0.0004939965],"about_ca_topic_score_codex":0.0012925789,"about_ca_topic_score_gemma":0.009245706,"teacher_disagreement_score":0.20553805,"about_ca_system_score_codex":0.00037293075,"about_ca_system_score_gemma":0.0009219378,"threshold_uncertainty_score":0.9999998},"labels":[],"label_agreement":null},{"id":"W4414378618","doi":"10.1093/genetics/iyaf201","title":"Identification and characterization of components of the <i>Candida albicans</i> inner kinetochore","year":2025,"lang":"en","type":"article","venue":"Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canada Research Chairs","keywords":"Kinetochore; Schizosaccharomyces pombe; Candida albicans; Saccharomyces cerevisiae; Centromere; Schizosaccharomyces; Genome; Genetic screen; Mutant","score_opus":0.01031608425884551,"score_gpt":0.2555988675994069,"score_spread":0.24528278334056142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414378618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99818915,0.00011665387,0.0007645526,0.0004296168,0.000067751156,0.00019150181,0.000015608393,0.0000029968382,0.00022216237],"genre_scores_gemma":[0.99884826,0.00012315143,0.000048277398,0.00011390927,0.000010475762,0.0000021872338,0.000023092163,0.0000026951375,0.0008279376],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995564,0.000018526933,0.00019292462,0.00008362843,0.000102592225,0.000045915607],"domain_scores_gemma":[0.9995772,0.000011122797,0.00008072381,0.00021647394,0.000100567384,0.000013890473],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006486518,0.000038968723,0.00010509552,0.000024606812,0.000021042957,0.0000027283909,0.000045062916,0.00003397665,0.000008571529],"category_scores_gemma":[0.000027311224,0.000027826567,0.00002484013,0.0001369704,0.00010701749,0.000010141031,0.000026577787,0.000036240264,3.4841142e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027518317,0.000026244881,0.28656077,0.0001008316,0.00000979551,4.952005e-8,0.000053212385,6.221491e-7,0.71166605,0.00013315186,0.000047037283,0.0013747109],"study_design_scores_gemma":[0.00018262943,0.000013894291,0.81335807,0.000055496366,0.000038356466,2.6544177e-7,0.000019569388,0.00011260643,0.18535097,0.00009472269,0.0007572362,0.000016177577],"about_ca_topic_score_codex":0.0000071573136,"about_ca_topic_score_gemma":0.000013298664,"teacher_disagreement_score":0.5267973,"about_ca_system_score_codex":0.0000089964915,"about_ca_system_score_gemma":0.00003090594,"threshold_uncertainty_score":0.113473445},"labels":[],"label_agreement":null},{"id":"W4414407719","doi":"10.3389/froh.2025.1661524","title":"Signs and symptoms of oral candidiasis associated with health factors and resistant Candida infections in a Northern Ontario patient cohort","year":2025,"lang":"en","type":"article","venue":"Frontiers in Oral Health","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Health Sciences North; NOSM University; McMaster University; Laurentian University","funders":"Natural Sciences and Engineering Research Council of Canada; Northern Ontario Heritage Fund Corporation; Northern Ontario Academic Medicine Association","keywords":"Cohort; Signs and symptoms; Mycosis; Invasive candidiasis; Cohort study; Incidence (geometry); Disease; Epidemiology","score_opus":0.012421543248581928,"score_gpt":0.27661084772716926,"score_spread":0.26418930447858735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414407719","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996829,0.0012364973,0.00017108834,0.00054476917,0.00012321213,0.000923832,0.00004219067,0.000017773307,0.00011168263],"genre_scores_gemma":[0.9990179,0.00013454577,0.000295177,0.0003234351,0.0000023606003,0.000018129676,0.000050569415,0.000011300852,0.00014656121],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99831384,0.0001797896,0.0005402076,0.00034891116,0.00021444759,0.00040278316],"domain_scores_gemma":[0.9992876,0.00006049819,0.00018867549,0.0001869668,0.000070145245,0.00020608843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005163357,0.00018040523,0.0008327445,0.0003003496,0.000120357574,0.000011031849,0.000034553337,0.000094515504,0.0000046746236],"category_scores_gemma":[0.00010848184,0.00014162116,0.000035740562,0.00052416144,0.00017353575,0.00006908941,0.000024366975,0.00032726445,6.0753486e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005854116,0.00028842466,0.9905114,0.00021053698,0.00008077521,0.000006894909,0.0029272884,0.000003988669,0.0000024693393,0.000015101642,0.0005021683,0.0048655346],"study_design_scores_gemma":[0.0016465992,0.0027082227,0.99232453,0.0006814064,0.000027303178,9.256422e-7,0.0022271539,0.00002394481,0.000005657255,0.000056375433,0.00019520972,0.000102664024],"about_ca_topic_score_codex":0.45587128,"about_ca_topic_score_gemma":0.98835194,"teacher_disagreement_score":0.53248066,"about_ca_system_score_codex":0.0025828811,"about_ca_system_score_gemma":0.002654666,"threshold_uncertainty_score":0.67541444},"labels":[],"label_agreement":null},{"id":"W4414454030","doi":"10.1101/2025.09.19.677366","title":"<i>Candida albicans</i> infiltrates colon and rectal cancers causing therapeutic resistance and decreased survival","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"ASTER","funders":"","keywords":"Colorectal cancer; Radiation therapy; Cancer; Immune system; Hypoxia (environmental); Mouse model of colorectal and intestinal cancer; Microbiome; Metabolomics; Cytokine","score_opus":0.014880973142811456,"score_gpt":0.25147857551696895,"score_spread":0.2365976023741575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414454030","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9860391,0.011006132,0.00028090025,0.0004633308,0.00052038184,0.00094491,0.00033252296,0.00020832813,0.00020442129],"genre_scores_gemma":[0.9947933,0.002903833,0.0011288321,0.00072421,0.00019206849,0.000085886364,0.0000011829137,0.00006182689,0.00010887953],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99711263,0.00018792036,0.00052790204,0.0011940332,0.0004174771,0.00056004565],"domain_scores_gemma":[0.99774367,0.00025533588,0.0002708382,0.0009049385,0.00042491037,0.00040029857],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006654777,0.0005797545,0.0009974648,0.00018880352,0.00026347875,0.00016811496,0.00014741451,0.00051428145,0.000028714745],"category_scores_gemma":[0.00030142348,0.0005827025,0.00011819081,0.00042762444,0.00047245977,0.00010725679,0.00020954873,0.0008372057,0.0000016919779],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015890005,0.00014746269,0.46264252,0.004388303,0.0007567526,0.00018591153,0.000056580968,0.000005640662,0.52909106,0.00072661054,0.0003928624,0.00001726891],"study_design_scores_gemma":[0.0021014975,0.00014007995,0.9422913,0.0033690038,0.00094915926,9.7865055e-8,0.00003553647,0.00013500711,0.0437936,0.000014750069,0.006142926,0.0010270482],"about_ca_topic_score_codex":0.0006080971,"about_ca_topic_score_gemma":0.00050028274,"teacher_disagreement_score":0.48529747,"about_ca_system_score_codex":0.00061607314,"about_ca_system_score_gemma":0.0022958647,"threshold_uncertainty_score":0.99966246},"labels":[],"label_agreement":null},{"id":"W4414589609","doi":"10.1080/21501203.2025.2561612","title":"Research advances and public health strategies in China on WHO priority fungal pathogens","year":2025,"lang":"en","type":"review","venue":"Mycology&#58 An International Journal on Fungal Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"China; Public health; Global health; Web of science; Strategic planning; Intervention (counseling)","score_opus":0.10275169532390457,"score_gpt":0.4903463974057618,"score_spread":0.3875947020818572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414589609","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021692991,0.96659297,0.000032189197,0.002665333,0.0018086567,0.0010004682,0.00038003697,0.000040104733,0.005787281],"genre_scores_gemma":[0.029158736,0.96812093,0.00012296814,0.0007672099,0.0009641521,0.000057058423,0.00024314657,0.00002970055,0.00053611764],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99275875,0.0031674937,0.0013549776,0.0010319704,0.0006784723,0.0010083435],"domain_scores_gemma":[0.99643105,0.0014288265,0.00057711743,0.00045738593,0.000612259,0.0004933442],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0044007925,0.00053697504,0.0022459708,0.0020667734,0.0003526037,0.00018611123,0.00077626004,0.0008386065,0.00024459502],"category_scores_gemma":[0.0015880859,0.00039553904,0.000382681,0.0005630241,0.00060341426,0.00032097087,0.00022016132,0.0041967114,0.000038892285],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010858786,0.0011705974,0.03251,0.003084578,0.00040236962,0.0010245648,0.00017112847,0.0000014160114,0.000011301006,0.034280736,0.000721065,0.92553633],"study_design_scores_gemma":[0.00127784,0.0064279744,0.06519981,0.0077515543,0.00007047772,0.00094278547,0.00047650267,0.0000055547675,9.565182e-7,0.002489534,0.91497564,0.0003813911],"about_ca_topic_score_codex":0.0000645576,"about_ca_topic_score_gemma":0.00051041326,"teacher_disagreement_score":0.925155,"about_ca_system_score_codex":0.0013192259,"about_ca_system_score_gemma":0.0046944045,"threshold_uncertainty_score":0.9998497},"labels":[],"label_agreement":null},{"id":"W4414679454","doi":"10.1101/2025.09.29.679244","title":"Aneuploidy promotes transient stress adaptation and metabolic flexibility in the human fungal pathogen <i>Aspergillus fumigatus</i>","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Institute of General Medical Sciences; Canadian Institute for Advanced Research","keywords":"Aneuploidy; Drug resistance; Gene; Transcriptome; Chromosome; Adaptation (eye); Antifungal drug; Genome; Resistome; Gene duplication","score_opus":0.02709840089503106,"score_gpt":0.26094796285231003,"score_spread":0.23384956195727896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414679454","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99062896,0.0052301995,0.00020148273,0.00044659522,0.0002556698,0.0022183517,0.00080128806,0.00017186064,0.000045615147],"genre_scores_gemma":[0.99795115,0.00049535494,0.0006776093,0.0003559276,0.00020595579,0.00024835014,0.0000043057767,0.000047444944,0.00001391156],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9961368,0.0004719858,0.0008138656,0.001355385,0.0006454846,0.0005765242],"domain_scores_gemma":[0.997351,0.00013021148,0.00024185286,0.0016289217,0.00042924067,0.00021876497],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016191619,0.0006079774,0.0009583816,0.00024780686,0.00024056404,0.00013190719,0.00040551377,0.00054327236,0.000022463775],"category_scores_gemma":[0.00027770933,0.00048978586,0.00023031724,0.0006195989,0.0003012027,0.00013299542,0.00019863775,0.0012966082,0.000004375815],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037049912,0.001444745,0.41266996,0.0042606173,0.00028382067,0.00030833928,0.0006892043,0.00007139723,0.57742107,0.0023602515,0.0000794101,0.000040695093],"study_design_scores_gemma":[0.0010019769,0.00011564256,0.95060694,0.0008205419,0.00040768003,6.122758e-8,0.00009011954,0.00038850398,0.04541839,0.000014060143,0.00065935234,0.00047674368],"about_ca_topic_score_codex":0.0002529269,"about_ca_topic_score_gemma":0.00020547955,"teacher_disagreement_score":0.537937,"about_ca_system_score_codex":0.00018287601,"about_ca_system_score_gemma":0.00074412074,"threshold_uncertainty_score":0.9997554},"labels":[],"label_agreement":null},{"id":"W4414737151","doi":"10.1021/acs.estlett.5c00795","title":"Public Health Implications of Airborne <i>Candida</i>: Viability, Drug Resistance, and Genetic Links to Clinical Strains","year":2025,"lang":"en","type":"article","venue":"Environmental Science & Technology Letters","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Ten Thousand Talent Program; Hong Kong Polytechnic University; Research Grants Council, University Grants Committee; National Natural Science Foundation of China; Canadian Institute for Advanced Research","keywords":"Transmission (telecommunications); Public health; Airborne transmission; Candida parapsilosis; Isolation (microbiology); Phylogenetic tree; Antifungal; Hazard","score_opus":0.020230224508939545,"score_gpt":0.3095576021700358,"score_spread":0.2893273776610963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414737151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79906476,0.00022821563,0.0017468327,0.19808358,0.000055681754,0.0004924571,0.000015387668,0.00004862698,0.0002644659],"genre_scores_gemma":[0.9847323,0.00013461978,0.005356679,0.009508235,0.000012713984,0.000028382874,0.000003250202,0.0000062580334,0.00021757447],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980164,0.00004700826,0.00052489614,0.0006991025,0.00025951143,0.00045308733],"domain_scores_gemma":[0.9988286,0.000051687195,0.00011065511,0.0007584593,0.000015788875,0.00023483628],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00088162697,0.00013235677,0.0003385304,0.0004288399,0.00026740463,0.000014063458,0.0003608567,0.00012893968,0.000024128443],"category_scores_gemma":[0.00020102796,0.00012215704,0.00006266258,0.0011683387,0.0047808453,0.00008150833,0.00027412217,0.0004065758,0.0000085792135],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016289605,0.00021269766,0.88796616,0.000027817827,0.000010618845,0.0000024905396,0.000075800635,6.55141e-7,0.0915085,0.0008365338,0.0010279503,0.018314512],"study_design_scores_gemma":[0.00034346178,0.00010370059,0.99176115,0.000035402212,0.000012427168,0.0000041621174,0.00022087603,0.000003995331,0.0019235032,0.00052691996,0.0049800496,0.000084355925],"about_ca_topic_score_codex":0.00001271051,"about_ca_topic_score_gemma":0.00013139169,"teacher_disagreement_score":0.18857534,"about_ca_system_score_codex":0.00030411812,"about_ca_system_score_gemma":0.00024633898,"threshold_uncertainty_score":0.99792755},"labels":[],"label_agreement":null},{"id":"W4414905722","doi":"10.1139/cjm-2025-0153","title":"High prevalence of <i>Candida</i> species in the respiratory tract of patients diagnosed with SARS-CoV-2","year":2025,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Coinfection; Respiratory tract; Bronchoalveolar lavage; Respiratory system; Isolation (microbiology); Respiratory tract infections; Prevalence; Pneumonia","score_opus":0.015461158678487283,"score_gpt":0.2505156981347587,"score_spread":0.23505453945627142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414905722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979978,0.0010583022,0.000008798759,0.0002950291,0.000099473735,0.00016073031,0.000091245405,6.1452715e-7,0.00028796378],"genre_scores_gemma":[0.99880195,0.000054499975,0.000042151078,0.0010241409,0.00001882168,8.7197054e-7,0.0000032735209,0.0000036787176,0.000050624636],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99913335,0.00010256895,0.00044516427,0.000095197545,0.000052674008,0.00017104176],"domain_scores_gemma":[0.99911964,0.00014581662,0.00024799682,0.00018633265,0.00025395153,0.000046263303],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039963794,0.00008184746,0.00035011917,0.00021253765,0.000024385223,0.0000027185642,0.00019341221,0.00007815667,0.0000335079],"category_scores_gemma":[0.0002512199,0.000050009876,0.000072883864,0.00020122006,0.00040385325,0.000032724714,0.0000049788373,0.0002267531,6.220247e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028332285,0.00009061423,0.88595325,0.00016778217,0.00003060972,0.0000737353,0.0002862293,0.0000011623341,0.10954263,0.00011864306,0.0032915273,0.0001604964],"study_design_scores_gemma":[0.0013262529,0.00071746454,0.9663625,0.00037637443,0.0000566088,0.00001557407,0.00022235238,5.0034977e-8,0.026897555,0.00003538235,0.003949723,0.00004017234],"about_ca_topic_score_codex":0.0012660876,"about_ca_topic_score_gemma":0.027424466,"teacher_disagreement_score":0.08264507,"about_ca_system_score_codex":0.00009161458,"about_ca_system_score_gemma":0.0013293695,"threshold_uncertainty_score":0.99032253},"labels":[],"label_agreement":null},{"id":"W4414952307","doi":"10.1111/myc.70125","title":"Evaluating the Potential of Galactosaminogalactan as a Diagnostic Target for Invasive <scp> <i>Aspergillosis</i> </scp>","year":2025,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; GLS Industries (Canada); McGill University Health Centre","funders":"MSD Life Science Foundation, Public Interest Incorporated Foundation; Japan Agency for Medical Research and Development","keywords":"Aspergillosis; Pulmonary aspergillosis; Mycosis; Urine; Respiratory disease","score_opus":0.025465360505223068,"score_gpt":0.3415667453005217,"score_spread":0.31610138479529865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414952307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891731,0.0018329262,0.00071639137,0.00065481884,0.00024401373,0.0011059401,0.000052325493,0.00003913725,0.0061813407],"genre_scores_gemma":[0.994141,0.0002033594,0.0009297101,0.0009131697,0.00011624825,0.00010764728,0.000043055723,0.000017299837,0.0035285454],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985011,0.00009826534,0.00039371254,0.00032650473,0.00036410367,0.00031630663],"domain_scores_gemma":[0.99416524,0.0047893417,0.00014422326,0.00045324044,0.00037484095,0.00007311918],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0005699248,0.0001775153,0.00039637435,0.00007587004,0.00019129168,0.000023429233,0.00017764122,0.000099707104,0.00007054854],"category_scores_gemma":[0.021260502,0.0001211122,0.00025853337,0.00027055145,0.00017671646,0.00006857174,0.000070117625,0.00016638177,0.000016984486],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060557306,0.0007346485,0.46916768,0.0015579424,0.00050405785,0.00003303247,0.00084597914,0.000113130634,0.49530298,0.0024530098,0.023439888,0.005242093],"study_design_scores_gemma":[0.0027914732,0.0021208888,0.64724696,0.0008454004,0.0009430051,0.000012472267,0.0032474876,0.00053432677,0.33093482,0.007240433,0.003969535,0.00011318855],"about_ca_topic_score_codex":0.00006556707,"about_ca_topic_score_gemma":0.000044057553,"teacher_disagreement_score":0.17807929,"about_ca_system_score_codex":0.00006139682,"about_ca_system_score_gemma":0.00050595694,"threshold_uncertainty_score":0.98698384},"labels":[],"label_agreement":null},{"id":"W4414967953","doi":"10.1080/21505594.2025.2569630","title":"Manganese homeostasis modulates glucan and chitin unmasking in the opportunistic yeast <i>Candida albicans</i>","year":2025,"lang":"en","type":"article","venue":"Virulence","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Institut de Cardiologie de Montréal; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fondation Institut de Cardiologie de Montréal; Canada Foundation for Innovation","keywords":"Mutant; Cell wall; Virulence; Biogenesis; Yeast; Homeostasis; Chitin; Saccharomyces cerevisiae; Intracellular","score_opus":0.013587805376490082,"score_gpt":0.28548264206594415,"score_spread":0.2718948366894541,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414967953","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98981076,0.0012257717,0.0001486407,0.0020369468,0.000049749793,0.00026258064,0.000024200424,0.000023708657,0.0064176293],"genre_scores_gemma":[0.9968712,0.0004969078,0.000075544645,0.0017376179,0.00002758592,0.000015630214,0.0000100519965,0.0000065968084,0.0007588651],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99904877,0.0000615186,0.00020133631,0.00027757973,0.00018454759,0.00022626895],"domain_scores_gemma":[0.99941087,0.00012547537,0.000036461814,0.00033725455,0.000028687433,0.0000612306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036454175,0.00011951771,0.00020592334,0.00008345462,0.00009777751,0.000031592845,0.00012781174,0.000051659747,0.0000503245],"category_scores_gemma":[0.00019949263,0.0000829971,0.000040339433,0.0003460634,0.00019286474,0.000055667108,0.000041090734,0.00019430726,0.0000066303473],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032038317,0.00025250704,0.8916332,0.0004887301,0.000043792377,0.00035868122,0.001600116,0.0000038888434,0.011877749,0.007185637,0.0010541035,0.08518121],"study_design_scores_gemma":[0.00068852346,0.00008466173,0.9890017,0.0005997795,0.00006774872,0.000024992263,0.002275846,0.00046051084,0.0007867001,0.0012878276,0.004569822,0.00015191731],"about_ca_topic_score_codex":0.00033863657,"about_ca_topic_score_gemma":0.00042533953,"teacher_disagreement_score":0.097368464,"about_ca_system_score_codex":0.000038415285,"about_ca_system_score_gemma":0.000113310634,"threshold_uncertainty_score":0.33845237},"labels":[],"label_agreement":null},{"id":"W4415216767","doi":"10.1111/hdi.70028","title":"Response to Commentary on “Exploring Oral Candidiasis in Hemodialysis Patients: <i>Candida</i> Species and Associated Risk Factor”","year":2025,"lang":"en","type":"letter","venue":"Hemodialysis International","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Hemodialysis; MEDLINE; Risk assessment; Infection risk; Mycosis","score_opus":0.028787580892822722,"score_gpt":0.27792022971872526,"score_spread":0.24913264882590255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415216767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.69894946,0.000031612806,0.00004157987,0.29650572,0.00063912134,0.00046714192,0.0022005695,0.00004874923,0.0011160552],"genre_scores_gemma":[0.6252514,0.00040239064,0.00012720776,0.3681105,0.00071066356,0.000099287565,0.0019952608,0.000042746327,0.0032605126],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9958406,0.00062620314,0.00081710063,0.00096591533,0.0012543526,0.00049579487],"domain_scores_gemma":[0.99734175,0.0012629089,0.0002936329,0.000575332,0.00037086383,0.00015549411],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007585515,0.0005207199,0.0011317842,0.0014089617,0.00015873015,0.00013098371,0.0003188272,0.00047668722,0.0005117897],"category_scores_gemma":[0.0022345877,0.0004990642,0.00044133485,0.000652655,0.00010712153,0.00020884215,0.00016225784,0.0014826265,0.000034035507],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026795187,0.00027607524,0.49159446,0.000037985537,0.0007852766,0.00012880877,0.00045305365,0.000015860482,0.00004297258,0.0000020621883,0.50115657,0.002827341],"study_design_scores_gemma":[0.0029166162,0.0002395677,0.6252622,0.00051627844,0.00046689936,6.1205986e-7,0.00011906448,0.00009088153,0.00032558548,0.000037893176,0.36956295,0.00046145727],"about_ca_topic_score_codex":0.0013088085,"about_ca_topic_score_gemma":0.0021340162,"teacher_disagreement_score":0.13366775,"about_ca_system_score_codex":0.0020267528,"about_ca_system_score_gemma":0.00020118218,"threshold_uncertainty_score":0.9997461},"labels":[],"label_agreement":null},{"id":"W4415285396","doi":"10.1371/journal.pbio.3003409","title":"Expansion of the functional genomics GRACE library reveals genes relevant for temperature-dependent fitness in Candida albicans","year":2025,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Canada Excellence Research Chairs, Government of Canada; Canadian Institute for Advanced Research","keywords":"Candida albicans; Functional genomics; Gene; Virulence; Adaptation (eye); Genomics; Phenotype; Corpus albicans","score_opus":0.018790413629795756,"score_gpt":0.26667609858598496,"score_spread":0.2478856849561892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415285396","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945558,0.0013762729,0.000078532605,0.0028213037,0.00023852607,0.00055217743,0.00008767282,0.000014569958,0.00027519453],"genre_scores_gemma":[0.99516404,0.00029767214,0.00023680768,0.0006716656,0.00006133872,0.00004770617,0.00006149476,0.000008415439,0.0034508894],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9991637,0.000084904874,0.00028006354,0.00024778012,0.00006317404,0.00016037424],"domain_scores_gemma":[0.9993544,0.00021625849,0.00006392123,0.00027956575,0.000058291436,0.00002751344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014885924,0.00009271461,0.0002833884,0.00006263226,0.000055346925,0.0000033773438,0.00010286581,0.0001564074,0.000063000436],"category_scores_gemma":[0.00019363662,0.000057546684,0.000089170484,0.00015004046,0.00012178393,0.000028637967,0.00006275043,0.00014381815,0.0000012892864],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063989795,0.00008354697,0.46880054,0.00014799983,0.000033928354,0.0000011355061,0.000052464457,0.000005004897,0.527345,0.0018976845,0.00070242083,0.00029037448],"study_design_scores_gemma":[0.0012959047,0.0001768511,0.7894262,0.00022353217,0.00007160034,0.000003231258,0.00028569886,0.00008202651,0.20188092,0.004014602,0.00244145,0.000097964854],"about_ca_topic_score_codex":0.00003724126,"about_ca_topic_score_gemma":0.00019642984,"teacher_disagreement_score":0.32546407,"about_ca_system_score_codex":0.0000519782,"about_ca_system_score_gemma":0.00035712591,"threshold_uncertainty_score":0.23466857},"labels":[],"label_agreement":null},{"id":"W4415388552","doi":"10.1101/2025.10.20.683421","title":"HyperdCas12a-Based Multiplexed Genetic Regulation in <i>Candida albicans</i>","year":2025,"lang":"","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Genetic screen; Gene; Functional genomics; Mutant; Ergosterol; Genomics; Phenotype; Efflux; Systems biology","score_opus":0.012719696837870225,"score_gpt":0.2367528108841423,"score_spread":0.22403311404627207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415388552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9820392,0.0044986084,0.0053926446,0.0007528254,0.0021932703,0.0040022107,0.0006078264,0.00038415255,0.00012923063],"genre_scores_gemma":[0.987615,0.0008422264,0.009011722,0.0010938498,0.0006607593,0.00043548332,0.0000025492345,0.00017752346,0.00016088328],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99069107,0.00072562293,0.0024458591,0.0031634213,0.0012811535,0.0016929032],"domain_scores_gemma":[0.99256957,0.0005257967,0.00090771745,0.003923252,0.0012850432,0.000788649],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.0017163192,0.0015424131,0.0022569692,0.0010740645,0.0003569909,0.00021570153,0.00092924596,0.0017514932,0.00068630325],"category_scores_gemma":[0.0015898386,0.0017419858,0.0006407894,0.0023513462,0.00061323104,0.00021666827,0.0004279928,0.0021792282,0.00018400868],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012118702,0.0009768164,0.3905725,0.0029258104,0.0002130442,0.00034374013,0.000023575005,0.0011753953,0.60214853,0.00012654372,0.0002551619,0.000027027148],"study_design_scores_gemma":[0.004530819,0.0001814246,0.8427203,0.0044374266,0.0005230752,1.7515097e-8,0.000012347572,0.0110052,0.13040352,0.0000026717619,0.0048450474,0.0013381442],"about_ca_topic_score_codex":0.00071576994,"about_ca_topic_score_gemma":0.00021508215,"teacher_disagreement_score":0.471745,"about_ca_system_score_codex":0.002060874,"about_ca_system_score_gemma":0.0056784963,"threshold_uncertainty_score":0.9999584},"labels":[],"label_agreement":null},{"id":"W4415404831","doi":"10.22541/au.176109489.98319484/v1","title":"Candida albicans phylogenetics: historical context and recent advances","year":2025,"lang":"","type":"preprint","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"University of Manitoba; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Candida albicans; Context (archaeology); Opportunistic pathogen; Genotype; Human pathogen; Pathogen","score_opus":0.022412526981100765,"score_gpt":0.2988235126895658,"score_spread":0.27641098570846506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415404831","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05895702,0.698403,0.008668462,0.012616413,0.007255429,0.003485326,0.00032128044,0.00016677096,0.21012628],"genre_scores_gemma":[0.5386836,0.3343684,0.00077063614,0.0017131468,0.00045146115,0.000067015644,0.000043905275,0.00002549145,0.12387633],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99488187,0.00024923624,0.0013596204,0.0019527482,0.0007202505,0.0008362797],"domain_scores_gemma":[0.99640095,0.00048959843,0.0003418699,0.0013822619,0.0006775853,0.00070772105],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006062746,0.00084062305,0.0018944021,0.00019284521,0.0002810295,0.000059762988,0.0003761345,0.00079353945,0.00452016],"category_scores_gemma":[0.0008536121,0.0007255917,0.00034790405,0.00029398943,0.00056997326,0.000066413384,0.00068460003,0.0013833662,0.000049093753],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018045381,0.0006197703,0.20943575,0.0030864866,0.00046382681,0.00007022222,0.0009181207,0.000010459344,0.00038805083,0.001374098,0.013009096,0.7688196],"study_design_scores_gemma":[0.0017189739,0.00053986313,0.036957495,0.001162373,0.00072786974,0.0000072142248,0.0019054224,0.00018717778,0.00059668283,0.0010671628,0.95440394,0.0007258486],"about_ca_topic_score_codex":0.0018526504,"about_ca_topic_score_gemma":0.008750641,"teacher_disagreement_score":0.9413948,"about_ca_system_score_codex":0.0025041234,"about_ca_system_score_gemma":0.0018399316,"threshold_uncertainty_score":0.9995195},"labels":[],"label_agreement":null},{"id":"W4415470253","doi":"10.1155/crdi/5543654","title":"<i>Candida blankii</i> : The Difficult Capture of a Fungus With Pathogenic Potential","year":2025,"lang":"en","type":"article","venue":"Case Reports in Infectious Diseases","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Pathogen; Bronchoalveolar lavage; Pulmonary disease; Disease; Identification (biology); Human pathogen; Fungus","score_opus":0.0032532230656974323,"score_gpt":0.23659336048552054,"score_spread":0.23334013741982312,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415470253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99260163,0.0030882335,0.00019247335,0.00009342007,0.00018159101,0.00057038385,0.000028196857,0.000057590158,0.0031864617],"genre_scores_gemma":[0.9989787,0.000083137,0.0000067924675,0.00023529794,0.000050237133,0.000053293454,0.000020195906,0.000011552037,0.0005607975],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987612,0.000059761845,0.00041256796,0.0003276158,0.00022908054,0.00020977463],"domain_scores_gemma":[0.9988429,0.000088131004,0.00016597542,0.00059372676,0.0002178084,0.00009146132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014833314,0.00016352514,0.0003448353,0.00009471479,0.00010990503,0.000016620013,0.000029289366,0.00007850756,0.000052583888],"category_scores_gemma":[0.0003749282,0.000095586016,0.0001541649,0.00050876825,0.0002370874,0.000041757718,0.00003478871,0.0001869819,8.8303375e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037860783,0.00053729,0.9045698,0.0003149406,0.00012116963,0.09120536,0.00011375457,0.00009258345,0.00069646124,0.000076813056,0.00072080875,0.0011723888],"study_design_scores_gemma":[0.0016166209,0.00024915492,0.9539441,0.00050110446,0.0009776833,0.04000554,0.0010416401,0.000044251694,0.00038443223,0.00047238267,0.00055166765,0.00021143907],"about_ca_topic_score_codex":0.00042135554,"about_ca_topic_score_gemma":0.0010628953,"teacher_disagreement_score":0.051199824,"about_ca_system_score_codex":0.00009778353,"about_ca_system_score_gemma":0.0005000211,"threshold_uncertainty_score":0.38978845},"labels":[],"label_agreement":null},{"id":"W4415474938","doi":"10.1681/asn.20257g7h67ht","title":"Oral Voriconazole vs. Amphotericin B Plus Flucytosine for Fungal Peritonitis in Peritoneal Dialysis: A Multicenter Randomized Noninferiority Trial with Stratification by Fungal Type","year":2025,"lang":"en","type":"article","venue":"Journal of the American Society of Nephrology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Voriconazole; Flucytosine; Amphotericin B; Peritonitis; Randomized controlled trial; Mycosis; Adverse effect","score_opus":0.013099782135547385,"score_gpt":0.30460053111632424,"score_spread":0.2915007489807768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415474938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99000096,0.00033182374,0.0026766085,0.0056877695,0.00019554848,0.0010394272,0.000024479039,0.000007261687,0.000036141824],"genre_scores_gemma":[0.99260545,0.00026789526,0.0041128625,0.0025531736,0.0001916386,0.000028614002,0.000008203194,0.000013739294,0.00021843285],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9978659,0.00039268017,0.0009137938,0.0002301009,0.0003118935,0.0002856417],"domain_scores_gemma":[0.9977065,0.00046826384,0.0009889646,0.00028747704,0.00047630395,0.00007251812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010846833,0.00019794914,0.001647837,0.000071469425,0.00009802064,0.000018562025,0.00022370798,0.000107597545,0.000020098709],"category_scores_gemma":[0.00025320472,0.000125718,0.0007406207,0.0005061146,0.0011753094,0.000095790645,0.000039786126,0.00043478896,3.7553667e-7],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.86007315,0.0006148631,0.029113691,0.00010997887,0.0008034116,0.0000058316673,0.0008391116,0.000026224361,0.099949665,0.000020989914,0.0071032,0.0013399014],"study_design_scores_gemma":[0.69561476,0.0072172834,0.2746965,0.00024039036,0.0020642953,0.00008224665,0.0038164519,0.006234904,0.005593538,0.000095991774,0.004029896,0.00031376444],"about_ca_topic_score_codex":0.0003720127,"about_ca_topic_score_gemma":0.00014155926,"teacher_disagreement_score":0.2455828,"about_ca_system_score_codex":0.00024669824,"about_ca_system_score_gemma":0.0007519605,"threshold_uncertainty_score":0.51266307},"labels":[],"label_agreement":null},{"id":"W4415567666","doi":"10.1177/01455613251387879","title":"Oral Cavity Involvement in Mucormycosis: A Systematic Review","year":2025,"lang":"en","type":"article","venue":"Ear Nose & Throat Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Oral cavity; Mucormycosis; MEDLINE; Identification (biology); Nasal cavity","score_opus":0.019475521434818687,"score_gpt":0.33110862883626974,"score_spread":0.31163310740145106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415567666","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8118496,0.17228529,0.0006825499,0.006376958,0.00062636065,0.0026157796,0.000006203675,0.000059882455,0.005497404],"genre_scores_gemma":[0.9800656,0.013062214,0.0003045168,0.004590448,0.000060483842,0.000025815369,0.000003290129,0.000010658627,0.0018769889],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.998096,0.00023960044,0.00076112483,0.00020550407,0.00040421332,0.0002935428],"domain_scores_gemma":[0.99908453,0.000059570084,0.00016565608,0.00038833724,0.00016467663,0.00013723614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017975378,0.00016072702,0.00084501965,0.00012835098,0.000107005886,0.000036877842,0.00014548168,0.00006816951,0.00026605002],"category_scores_gemma":[0.0006826395,0.0001137324,0.00022843074,0.00039331676,0.00005430277,0.00012171447,0.000048280635,0.00055251684,0.00008768745],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004387861,0.0015212287,0.42630762,0.53074294,0.0005871974,0.0013107382,0.0010354222,0.0000022518752,0.0023555022,0.0008655146,0.032592382,0.002240403],"study_design_scores_gemma":[0.0029963527,0.00035316497,0.41224414,0.57785386,0.0014576552,0.00031837684,0.0015645577,0.00007556391,0.00040218508,0.0009743466,0.0014107968,0.00034901718],"about_ca_topic_score_codex":0.0000573846,"about_ca_topic_score_gemma":0.00024021609,"teacher_disagreement_score":0.16821602,"about_ca_system_score_codex":0.00035400974,"about_ca_system_score_gemma":0.00034726123,"threshold_uncertainty_score":0.4637873},"labels":[],"label_agreement":null},{"id":"W4415607043","doi":"10.15264/cpho.2025.32.2.33","title":"Mucormycosis in a Pediatric Oncology Population - Review of Cases and the Literature","year":2025,"lang":"en","type":"article","venue":"Imsang soa hyeoraek jong-yang/Imsang soa hyeol'aeg jong'yang/Clinical pediatric hematology-oncology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa","funders":"","keywords":"Mucormycosis; Incidence (geometry); Myeloid leukemia; Cancer; Population; Amphotericin B; Pediatric cancer; Retrospective cohort study; Lymphoblastic Leukemia","score_opus":0.0289605126276765,"score_gpt":0.4099360203316706,"score_spread":0.3809755077039941,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415607043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7625146,0.21219215,0.00010073387,0.014573692,0.0017939651,0.003726937,0.00018319735,0.00028155936,0.004633198],"genre_scores_gemma":[0.85122657,0.1343859,0.0013237774,0.010214787,0.0011813832,0.00038365772,0.00046314465,0.00010972801,0.0007110602],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9850063,0.0041857883,0.0058945906,0.00222761,0.0009405132,0.0017452496],"domain_scores_gemma":[0.96964055,0.02426601,0.002333618,0.0019355944,0.0011032526,0.00072094233],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.008940783,0.001186284,0.005869244,0.001403473,0.0004375655,0.000065350956,0.0009725262,0.0028023035,0.00037170068],"category_scores_gemma":[0.02852503,0.00089860574,0.0014445758,0.0044410643,0.0017900555,0.00045744257,0.0007307861,0.0034731706,0.00017409345],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033534882,0.0022843413,0.9249669,0.011441373,0.0003562003,0.002175512,0.00057013205,0.00000175276,0.00002338661,0.005085961,0.03856079,0.011180221],"study_design_scores_gemma":[0.031514548,0.0052144923,0.8857211,0.006062202,0.007854714,0.003443809,0.0019397762,0.0003133043,0.00005255098,0.005774931,0.04995874,0.002149858],"about_ca_topic_score_codex":0.0006472565,"about_ca_topic_score_gemma":0.0015733879,"teacher_disagreement_score":0.088712,"about_ca_system_score_codex":0.0008522244,"about_ca_system_score_gemma":0.0027090788,"threshold_uncertainty_score":0.99934644},"labels":[],"label_agreement":null},{"id":"W4415700246","doi":"10.1017/ice.2025.10228","title":"Preparedness for <i>Candida auris</i> in Canadian Nosocomial Infection Surveillance Program (CNISP) hospitals, 2024","year":2025,"lang":"en","type":"article","venue":"Infection Control and Hospital Epidemiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"West Park Healthcare Centre; McMaster University; Surrey Memorial Hospital; Island Health; Saskatchewan Health; Stollery Children's Hospital; BC Children's Hospital; Fraser Health; University Health Network; University of Alberta; The Scarborough Hospital; Public Health Ontario; University of Calgary; Health Sciences Centre; Alberta Health Services; Jewish General Hospital; Sunnybrook Health Science Centre; BC Centre for Disease Control; Public Health Agency of Canada; McGill University Health Centre; North York General Hospital; Sinai Health System; Institut National de Santé Publique du Québec; Moncton Hospital; Dalhousie University; Saskatchewan Health Authority; Provincial Health Services Authority; B.C. Women's Hospital & Health Centre; Vancouver Coastal Health; Western University","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Preparedness; MEDLINE; Epidemiologic Surveillance; Infection control; Public health; Resource constraints","score_opus":0.010528254107702566,"score_gpt":0.33036685205973443,"score_spread":0.31983859795203184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415700246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98275334,0.0009845317,0.0021184527,0.0065326802,0.0017409808,0.0027055307,0.00005940922,0.000113466485,0.002991625],"genre_scores_gemma":[0.996452,0.00045675767,0.000111683876,0.0013855587,0.00023769257,0.00074778177,0.000053291587,0.000013411421,0.00054184],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979128,0.00022584999,0.0006102347,0.0005571602,0.000058689126,0.00063524384],"domain_scores_gemma":[0.99844664,0.0007440721,0.00013267351,0.0002291459,0.00019992843,0.0002475071],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013846655,0.00022772749,0.0008173011,0.00025174837,0.00018068332,0.000019949517,0.000042292395,0.00036654185,0.000022520064],"category_scores_gemma":[0.0030693638,0.0002048019,0.00019348733,0.00028278134,0.00020773495,0.00010925152,0.000017869132,0.00030390485,0.0000057712055],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043239145,0.0001878236,0.96977645,0.0001752923,0.00008452228,0.000004742748,0.000055824614,0.00002632346,0.00003386901,0.0016626922,0.0048868065,0.02267325],"study_design_scores_gemma":[0.0026020166,0.0012781426,0.934236,0.00007644523,0.00005382694,0.00000461065,0.000016695461,0.0019033471,0.00000740023,0.0024419616,0.057198692,0.0001808646],"about_ca_topic_score_codex":0.2513757,"about_ca_topic_score_gemma":0.53670526,"teacher_disagreement_score":0.28532955,"about_ca_system_score_codex":0.00038904988,"about_ca_system_score_gemma":0.0004932777,"threshold_uncertainty_score":0.83515793},"labels":[],"label_agreement":null},{"id":"W4415700958","doi":"10.1128/jcm.01236-24","title":"Non-invasive diagnosis of invasive fungal disease with cell-free DNA PCR","year":2025,"lang":"en","type":"review","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Infectious Diseases Centre; University of British Columbia; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Polymerase chain reaction; Fungal disease; Real-time polymerase chain reaction; Mycosis; Diagnostic test; Gold standard (test); Aspergillosis","score_opus":0.05590345537021714,"score_gpt":0.3862893338487032,"score_spread":0.33038587847848605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415700958","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017307822,0.97950894,0.000027886033,0.00038754972,0.00083176617,0.0009387315,0.00047195933,0.000007789369,0.00051757006],"genre_scores_gemma":[0.0058361217,0.99148476,0.0004899739,0.0005245915,0.0007008293,0.000019541381,0.00007826142,0.000038607148,0.0008273392],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99393487,0.00070395507,0.0041673854,0.00058537454,0.00018744147,0.00042096886],"domain_scores_gemma":[0.9839349,0.009361031,0.0040246714,0.0010799877,0.0010430166,0.00055639516],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001509287,0.0005471904,0.0067760968,0.00032662103,0.000050406306,0.00001026785,0.0008007021,0.000898954,0.00020545586],"category_scores_gemma":[0.010285292,0.00032602294,0.003013983,0.00037317522,0.0008488702,0.00006480107,0.00026206532,0.0018876914,0.000027781476],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012534988,0.0074839867,0.34400314,0.23608904,0.0071802223,0.0057340637,0.00009234952,0.0000014277874,0.00036107554,0.00006702045,0.12354326,0.26290944],"study_design_scores_gemma":[0.008666769,0.008914539,0.012227946,0.16033147,0.021453643,0.00069042225,0.000112176735,1.0431588e-7,0.00041132787,0.00017192434,0.7861772,0.00084246276],"about_ca_topic_score_codex":0.0000048879383,"about_ca_topic_score_gemma":0.000060438204,"teacher_disagreement_score":0.66263396,"about_ca_system_score_codex":0.00011703463,"about_ca_system_score_gemma":0.008855636,"threshold_uncertainty_score":0.9999192},"labels":[],"label_agreement":null},{"id":"W4415890430","doi":"10.1016/j.jhin.2025.10.024","title":"Detection of Candidozyma (formerly Candida) auris from ward wastewater during an outbreak using culture and molecular methods","year":2025,"lang":"en","type":"article","venue":"Journal of Hospital Infection","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; Gilead UK and Ireland Corporate Contributions; Gilead Sciences","keywords":"Outbreak; Wastewater; Medical waste; Candida auris; Infection control; Cross infection","score_opus":0.008791368663236727,"score_gpt":0.31957402137023283,"score_spread":0.3107826527069961,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415890430","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98306125,0.0005684659,0.015598811,0.00005474476,0.00047905606,0.00013032985,0.00000284745,0.000009394105,0.00009510377],"genre_scores_gemma":[0.9970096,0.00012220367,0.002664789,0.000023160697,0.00011046594,9.462438e-7,0.000002033881,0.0000090259255,0.0000578053],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990544,0.00009087536,0.0004115084,0.00014238052,0.00017707843,0.00012378649],"domain_scores_gemma":[0.99920845,0.000018053606,0.0002681472,0.00012688615,0.00028912874,0.00008932506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030366043,0.000119173994,0.00034676425,0.00016898068,0.00008434141,0.000024843253,0.000030317362,0.00013240386,0.000010318056],"category_scores_gemma":[0.0001204283,0.000090332884,0.00014338948,0.00017141993,0.000055640197,0.00034008306,0.000019622052,0.00026320454,2.1194772e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041980803,0.000108875014,0.22192723,0.0001046168,0.00015170105,0.000018727089,0.0005663508,0.000026748894,0.7728348,0.0000040244113,0.0000053796857,0.0038317514],"study_design_scores_gemma":[0.000894716,0.0011672135,0.44320694,0.00023035305,0.00027181534,0.000038389186,0.00039028274,0.00022103246,0.5531842,0.00025950943,0.00006226869,0.00007326058],"about_ca_topic_score_codex":0.0011780065,"about_ca_topic_score_gemma":0.00014778036,"teacher_disagreement_score":0.2212797,"about_ca_system_score_codex":0.00018066226,"about_ca_system_score_gemma":0.000076081385,"threshold_uncertainty_score":0.3683668},"labels":[],"label_agreement":null},{"id":"W4416019837","doi":"10.1101/2025.11.06.686417","title":"The Unique Efg1 Fungal Virulence Regulon in the Catheterized Bladder Environment","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; University of Notre Dame; Deutsche Forschungsgemeinschaft; National Institutes of Health; Open Philanthropy Project; Good Ventures Foundation","keywords":"Regulon; Virulence; Pathogenesis; Transcription factor; Fungus; Urinary system","score_opus":0.013294487177471956,"score_gpt":0.2376109397389684,"score_spread":0.22431645256149646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416019837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904206,0.003238795,0.0005846408,0.002785129,0.00052110606,0.0020474184,0.00013346788,0.00013322032,0.00013563393],"genre_scores_gemma":[0.9949084,0.0027163704,0.0006604019,0.00090640737,0.00021758222,0.00041527356,4.5978948e-7,0.000045797184,0.00012933384],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9964922,0.0005200375,0.000685798,0.0009998329,0.0006690743,0.0006330341],"domain_scores_gemma":[0.99630576,0.0003543958,0.00027674562,0.0027595018,0.0001534424,0.00015017918],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002136315,0.0005304849,0.00062146666,0.00012520506,0.00031254077,0.00014967957,0.0008695145,0.0005052992,0.0000472766],"category_scores_gemma":[0.00041211882,0.00034222752,0.00027686427,0.0003600241,0.00041770886,0.00006782419,0.00045310258,0.0015437306,0.000051149782],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021304225,0.0017738537,0.18347876,0.0021972135,0.0008698648,0.00081842794,0.00035991435,0.00007583092,0.7985,0.005975124,0.003739774,0.00008081545],"study_design_scores_gemma":[0.0011750463,0.0001516974,0.91026783,0.0010827495,0.0003138316,6.8636254e-8,0.000054765926,0.0002328831,0.054719687,0.000020527601,0.031296723,0.0006841798],"about_ca_topic_score_codex":0.000102115526,"about_ca_topic_score_gemma":0.000029339919,"teacher_disagreement_score":0.7437803,"about_ca_system_score_codex":0.00047547862,"about_ca_system_score_gemma":0.0008663898,"threshold_uncertainty_score":0.99990296},"labels":[],"label_agreement":null},{"id":"W4416070112","doi":"10.2147/idr.s551470","title":"First Report of Cystobasidium slooffiae in Human Wounds from China: Molecular Identification and Clinical Insights","year":2025,"lang":"en","type":"article","venue":"Infection and Drug Resistance","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Peking Union Medical College; Nanjing Medical University; Peking Union Medical College Hospital; Chinese Academy of Medical Sciences","keywords":"Echinocandins; Identification (biology); Pathogen; Human pathogen; Fungal pathogen","score_opus":0.009428861885064862,"score_gpt":0.3173449272632998,"score_spread":0.30791606537823496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416070112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917705,0.0016762796,0.0014646065,0.00061451865,0.00016192022,0.00023526694,0.0000032554433,0.0000297903,0.00404386],"genre_scores_gemma":[0.9957868,0.0004720275,0.00010809081,0.00006368035,0.00002693022,0.000009410747,0.000021039881,0.0000063399248,0.0035057222],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986279,0.000090561545,0.0006488821,0.00038959045,0.00014542667,0.00009765868],"domain_scores_gemma":[0.9992294,0.000106571584,0.00017318643,0.00034067716,0.00009217868,0.00005801486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052983523,0.00010641727,0.00032018663,0.00012550241,0.00010192441,0.000021661568,0.000030514067,0.00011188598,0.000009585826],"category_scores_gemma":[0.00041750923,0.000100339974,0.000068383786,0.00027007892,0.00020118714,0.00008858249,0.000027414944,0.00019162922,9.421005e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027789068,0.00022049896,0.9830661,0.00025331444,0.00003906658,0.00008230306,0.00014651925,0.0000011849962,0.012896802,0.002056228,0.00051786896,0.000442219],"study_design_scores_gemma":[0.0008375386,0.000021256197,0.9880086,0.00035671034,0.000054245327,0.0000035452135,0.00004153555,0.0000331781,0.0035083557,0.0030279616,0.0040300163,0.00007705427],"about_ca_topic_score_codex":0.00083021674,"about_ca_topic_score_gemma":0.013547737,"teacher_disagreement_score":0.012717521,"about_ca_system_score_codex":0.00005762706,"about_ca_system_score_gemma":0.00006357729,"threshold_uncertainty_score":0.7559956},"labels":[],"label_agreement":null},{"id":"W4416079781","doi":"10.1073/pnas.2505310122","title":"Synergistic interactions between <i>Candida albicans</i> and <i>Enterococcus faecalis</i> promote toxin-dependent host cell damage","year":2025,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Dental and Craniofacial Research; National Institutes of Health; Bundesministerium für Bildung und Forschung; Deutsche Forschungsgemeinschaft","keywords":"Cytolysin; Host (biology); Bacteria; Fungus; Population; Yeast; Pathogen","score_opus":0.02588294467685936,"score_gpt":0.32149581839169256,"score_spread":0.2956128737148332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416079781","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9741933,0.0001222796,0.000014697677,0.0038166035,0.000023788436,0.0002922539,0.000042885884,0.000012044666,0.02148216],"genre_scores_gemma":[0.9970484,0.000034272518,0.00030925512,0.0005274243,0.000049380244,0.00000865878,3.9922776e-7,0.0000032615383,0.0020189723],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984684,0.0000072803846,0.00035769088,0.00029427017,0.000719195,0.00015315767],"domain_scores_gemma":[0.99928015,0.00015699744,0.00023611877,0.000015511614,0.00025422807,0.000056983634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007201713,0.000106211606,0.00023472353,0.00014652096,0.00019961873,0.000027477823,0.000334349,0.00006335692,0.000019319425],"category_scores_gemma":[0.0004403073,0.00007068283,0.00007636048,0.0005362408,0.00080339477,0.00024704944,0.00015208982,0.000241683,9.327432e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054535063,0.00010824004,0.25395045,0.0003342564,0.000031709515,3.349729e-8,0.00016295865,0.0000015487589,0.7399,0.004027964,0.0011177462,0.0003105293],"study_design_scores_gemma":[0.0004402189,0.00008256951,0.51341754,0.0004325774,0.000097560296,0.0000021113049,0.00034132367,0.00011011709,0.475164,0.008943544,0.00088517496,0.00008324385],"about_ca_topic_score_codex":0.000034021745,"about_ca_topic_score_gemma":0.0000012960944,"teacher_disagreement_score":0.26473603,"about_ca_system_score_codex":0.000056413428,"about_ca_system_score_gemma":0.0000643994,"threshold_uncertainty_score":0.29601416},"labels":[],"label_agreement":null},{"id":"W4416114022","doi":"10.1371/journal.pone.0335473","title":"Characterization of ORF19.7608 (PPP1), a biofilm-induced gene of Candida albicans","year":2025,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Concordia University; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biofilm; Candida albicans; Corpus albicans; Gene; Phenotype; Protein subunit; Subcellular localization; Green fluorescent protein; Vacuole","score_opus":0.03913516197520698,"score_gpt":0.2629702310522951,"score_spread":0.22383506907708814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416114022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967769,0.000066486755,0.000096193384,0.000517412,0.000027440923,0.00033978542,0.000050866154,0.000021445345,0.0021034777],"genre_scores_gemma":[0.99690723,0.00010606432,0.00041780173,0.00016529442,0.00003459277,0.0000103175935,0.00007396314,0.000008451662,0.0022762679],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99908817,0.000020448326,0.00032878944,0.00017790738,0.0002517485,0.00013291546],"domain_scores_gemma":[0.99922705,0.00003338564,0.00011550296,0.00033694445,0.00023578861,0.000051323885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001197094,0.00008757532,0.00040928522,0.00010411037,0.000024231482,0.0000026994662,0.000066704335,0.00008266259,0.00019713234],"category_scores_gemma":[0.00018538328,0.000078437166,0.00006447406,0.00032497477,0.00006408179,0.000040033665,0.000023943277,0.00009041366,0.00000615632],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025668181,0.00096080505,0.13119726,0.0005550898,0.0001822046,0.0000021609333,0.00011409654,2.1275111e-8,0.8660889,0.00015701965,0.000013166508,0.000472553],"study_design_scores_gemma":[0.0004394302,0.00013582101,0.31405213,0.0003660154,0.00017385007,1.8024977e-7,0.00003336414,0.000034932305,0.68468106,0.000020124002,0.0000226197,0.0000404541],"about_ca_topic_score_codex":0.00015119818,"about_ca_topic_score_gemma":0.00007372456,"teacher_disagreement_score":0.18285488,"about_ca_system_score_codex":0.00004397047,"about_ca_system_score_gemma":0.00020488117,"threshold_uncertainty_score":0.31985748},"labels":[],"label_agreement":null},{"id":"W4416127421","doi":"10.1002/exp.20240482","title":"Global Stress Responses Identify the Functionally Divergent Regulators Required for <i>Candida auris</i> Commensalism and Pathogenicity","year":2025,"lang":"en","type":"article","venue":"Exploration","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Shanghai Jiao Tong University; Program of Shanghai Academic Research Leader; Government of Jiangsu Province; State Key Laboratory of Pathogen and Biosecurity; National Natural Science Foundation of China","keywords":"Commensalism; Regulon; Virulence; Fight-or-flight response; Host (biology); Pathogenicity; Gene; Mutualism (biology); Experimental evolution","score_opus":0.03196191186108261,"score_gpt":0.3319826286472673,"score_spread":0.3000207167861847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416127421","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.967285,0.0006355994,0.02181808,0.008597269,0.0004484166,0.0007275149,0.00017397391,0.00005086621,0.00026332412],"genre_scores_gemma":[0.9965972,0.00010993145,0.00017508848,0.0010361383,0.00010684727,0.0000786189,0.0001356301,0.0000053730355,0.0017551818],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990647,0.00010042898,0.00023867442,0.00024842337,0.00021078806,0.00013701472],"domain_scores_gemma":[0.9992685,0.00014613575,0.00006912993,0.00027450707,0.00019169779,0.00005006156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043924432,0.00010474983,0.00015649945,0.000031327265,0.00031621876,0.00004576541,0.000056835583,0.000070518,0.000013903406],"category_scores_gemma":[0.0003501363,0.00007559611,0.000078842175,0.00018501238,0.00010141109,0.00019267629,0.00004392353,0.000056632354,0.0000030186468],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010389999,0.0003705788,0.82067,0.00038066972,0.0003050647,0.000011726401,0.0012137195,0.00004482127,0.016682591,0.030499151,0.10820681,0.01122485],"study_design_scores_gemma":[0.0014171712,0.0001697346,0.9701361,0.00011663352,0.00017889215,0.0000023880177,0.0013551752,0.0002940418,0.0028714798,0.011244506,0.012098125,0.00011574759],"about_ca_topic_score_codex":0.000034671975,"about_ca_topic_score_gemma":0.00035097418,"teacher_disagreement_score":0.14946608,"about_ca_system_score_codex":0.000109498484,"about_ca_system_score_gemma":0.00012920395,"threshold_uncertainty_score":0.30827197},"labels":[],"label_agreement":null},{"id":"W4416223852","doi":"10.1101/2025.11.13.688365","title":"Distinct Ire1-driven transcriptional responses control morphogenesis in <i>Candida albicans</i>","year":2025,"lang":"","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of Toronto","keywords":"Morphogenesis; Transcriptome; Transmembrane protein; Transcription factor; Transcriptional regulation; Gene; Downregulation and upregulation; Fungal protein","score_opus":0.014123861966905108,"score_gpt":0.2430163649729398,"score_spread":0.2288925030060347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416223852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9730059,0.008309936,0.0046857074,0.0016180676,0.0023325146,0.003477996,0.0061206724,0.00033301808,0.00011621536],"genre_scores_gemma":[0.99334943,0.0021983592,0.0010766606,0.0012765848,0.0008247242,0.0007222952,0.0000031629008,0.00017867661,0.00037012342],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.98919433,0.0013336018,0.0026390175,0.003330894,0.001559234,0.0019429242],"domain_scores_gemma":[0.99274653,0.0010469023,0.00079430215,0.003072867,0.0013269073,0.0010124652],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","research_integrity"],"category_scores_codex":[0.0025797097,0.0017819317,0.0029724156,0.0010499158,0.00050030736,0.00024194783,0.0012260375,0.001591678,0.0011585372],"category_scores_gemma":[0.0019303652,0.0019325365,0.0010346768,0.0019341008,0.0010153097,0.00030911292,0.00031654237,0.002362527,0.00017614805],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005295646,0.0010553517,0.454722,0.0018394564,0.00062408904,0.0005571836,0.000029796982,0.000069926944,0.53484374,0.00067210605,0.0002826172,0.000008068148],"study_design_scores_gemma":[0.006381159,0.00031732323,0.95330286,0.0039677606,0.0011982027,5.997659e-8,0.000023663646,0.000981139,0.020380702,0.0000030650174,0.011863194,0.0015808436],"about_ca_topic_score_codex":0.000692482,"about_ca_topic_score_gemma":0.00029354883,"teacher_disagreement_score":0.51446307,"about_ca_system_score_codex":0.0019832216,"about_ca_system_score_gemma":0.0067970324,"threshold_uncertainty_score":0.9999391},"labels":[],"label_agreement":null},{"id":"W4416451317","doi":"10.1093/jimmun/vkaf283.1649","title":"Differential type I IFN signaling is involved in regulating neutrophil anti-fungal host responses to Aspergillus fumigatus 3902","year":2025,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Aspergillus fumigatus; Immune system; Aspergillosis; Fungus; Respiratory burst; Hypha; Aspergillus; Reactive oxygen species; Immunity","score_opus":0.0207256252952801,"score_gpt":0.29450360681561316,"score_spread":0.27377798152033306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416451317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914939,0.002451116,0.00013320442,0.0049654157,0.000540967,0.00017241413,0.0000024537665,0.000011332106,0.0002292209],"genre_scores_gemma":[0.9976469,0.00034158689,0.00015896259,0.00082963053,0.00012805208,8.3504995e-7,9.3435733e-7,0.00001324207,0.0008798307],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99824506,0.00038284046,0.00068190444,0.00015299581,0.00021254086,0.00032465547],"domain_scores_gemma":[0.99858445,0.0004370409,0.00022409357,0.00036456154,0.00033049038,0.000059355054],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007287835,0.0001599908,0.000561477,0.00032791882,0.00012820316,0.000016072221,0.000269637,0.00014566134,0.00015520444],"category_scores_gemma":[0.00089879066,0.00010593265,0.00013361608,0.0005059838,0.0001761373,0.000067312256,0.0001171349,0.000698778,0.000013126383],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011115335,0.00012279517,0.09151345,0.000033626573,0.00020987987,0.00008411533,0.0009584041,0.000019962923,0.89430344,0.00015921058,0.00033137106,0.001148409],"study_design_scores_gemma":[0.0017078955,0.00091836933,0.92008436,0.0005081087,0.00014775105,0.000095024516,0.001497377,0.000041360243,0.074338146,0.00024529835,0.00031281557,0.00010349362],"about_ca_topic_score_codex":0.00007827878,"about_ca_topic_score_gemma":0.000056396402,"teacher_disagreement_score":0.8285709,"about_ca_system_score_codex":0.00015727649,"about_ca_system_score_gemma":0.0003359946,"threshold_uncertainty_score":0.43198082},"labels":[],"label_agreement":null},{"id":"W4416695890","doi":"10.1128/spectrum.01803-25","title":"Phylogenomic analysis and genetic mechanisms of antifungal resistance in clinical isolates of <i>Candida glabrata</i> ( <i>Nakaseomyces glabratus</i> ) from across Canada, 2013–2020","year":2025,"lang":"en","type":"article","venue":"Microbiology Spectrum","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dr. Georges-L.-Dumont University Hospital Centre; Public Health Ontario; Newfoundland and Labrador Centre for Applied Health Research; BC Centre for Disease Control; Nova Scotia Cancer Centre; Queen Elizabeth II Health Sciences Centre; Public Health Agency of Canada; Health PEI; St. John’s Health Sciences Centre; University of Toronto; London Health Sciences Centre; Manitoba Health; Provincial Laboratory of Public Health; University of Calgary; Institut National de Santé Publique du Québec; University of Manitoba; Nova Scotia Health Authority","funders":"","keywords":"Genome; Genetic diversity; Antifungal; Drug resistance; Gene; Genetic variation; Phylogenetics; Clade; Phylogenetic tree","score_opus":0.004997168697401469,"score_gpt":0.2587446412420258,"score_spread":0.2537474725446243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416695890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99053425,0.005965551,0.00061026064,0.0010383723,0.0002054765,0.00028132545,0.0012497295,0.00001119488,0.00010384432],"genre_scores_gemma":[0.9965421,0.0007856758,0.0015352763,0.0005796021,0.000032717886,0.000004212617,0.00015551128,0.00001192154,0.00035299262],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974501,0.00015427392,0.0011585199,0.0007204073,0.00007410454,0.00044255433],"domain_scores_gemma":[0.9985754,0.00032970333,0.00032489377,0.0006001416,0.00008000626,0.00008986628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038533425,0.00025386616,0.0013265512,0.00010482717,0.00006567997,0.000008716699,0.00022713303,0.00027610577,0.00009148385],"category_scores_gemma":[0.00010107431,0.00022975415,0.00021727922,0.00080613815,0.00055469805,0.00003157155,0.00013651596,0.00033024626,0.0000016926932],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007241969,0.00009796955,0.58944553,0.00008327047,0.00051431474,0.00003947338,0.00004917275,0.0000020697985,0.40805295,0.000086587585,0.0008123133,0.00009214459],"study_design_scores_gemma":[0.0014078752,0.0001449368,0.8343009,0.00009886166,0.00045832095,0.000004211988,0.0002021884,0.000026520422,0.16188519,0.0008058778,0.00050217926,0.00016296768],"about_ca_topic_score_codex":0.15878204,"about_ca_topic_score_gemma":0.9216526,"teacher_disagreement_score":0.7628706,"about_ca_system_score_codex":0.00010201593,"about_ca_system_score_gemma":0.0005497933,"threshold_uncertainty_score":0.9369103},"labels":[],"label_agreement":null},{"id":"W4416787654","doi":"10.21203/rs.3.rs-5744219/v1","title":"Stress-driven emergence of heritable non-genetic drug resistance","year":2025,"lang":"en","type":"preprint","venue":"Research Square","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"School of Medicine, Stanford University; Universidade de Macau; Crohn's and Colitis Foundation; Damon Runyon Cancer Research Foundation; National Institutes of Health; National Science Foundation","keywords":"Epigenetics; Histone; Histone deacetylase; Chromatin; Drug resistance; Regulator; Mechanism (biology); Drug; Chromatin remodeling","score_opus":0.04590527959759882,"score_gpt":0.4051072809896493,"score_spread":0.3592020013920505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416787654","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8954807,0.0149095785,0.00083499955,0.0022141978,0.0005324426,0.00488978,0.0013165353,0.00012296965,0.07969881],"genre_scores_gemma":[0.9233898,0.0029694655,0.0025667667,0.000021527056,0.00015269747,0.00018902165,0.00012921393,0.00003141542,0.07055011],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9951514,0.0003887273,0.0007404538,0.0010344553,0.0018608208,0.00082415075],"domain_scores_gemma":[0.9951565,0.0003582973,0.00017075962,0.0020725913,0.0019507019,0.0002911528],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001185243,0.00032818032,0.0009107636,0.00039840658,0.00019100645,0.00003762044,0.0006905755,0.00036690358,0.000847246],"category_scores_gemma":[0.0010558772,0.00030215608,0.0003670167,0.00084595743,0.0004903624,0.00005114254,0.0010960241,0.0018781194,0.00004979373],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023529134,0.001486876,0.7709365,0.08051457,0.00048536508,0.00040279378,0.002311376,0.0005521582,0.00711223,0.0006569164,0.13040811,0.0027801767],"study_design_scores_gemma":[0.0018558699,0.0004270037,0.9117278,0.03481968,0.00023704566,0.000002229847,0.005903051,0.0015436958,0.023280565,0.005151718,0.014107357,0.00094398286],"about_ca_topic_score_codex":0.0007339677,"about_ca_topic_score_gemma":0.00227236,"teacher_disagreement_score":0.1407913,"about_ca_system_score_codex":0.00022092108,"about_ca_system_score_gemma":0.0022743258,"threshold_uncertainty_score":0.9999431},"labels":[],"label_agreement":null},{"id":"W4417032522","doi":"10.1111/myc.70135","title":"The Importance of Early Mycological Clearance of Uncomplicated Candidaemia and Its Implications for Clinical Practice","year":2025,"lang":"en","type":"article","venue":"Mycoses","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Servier; Shionogi; Astellas Pharma; Deutsche Forschungsgemeinschaft; Cidara Therapeutics; Deutsches Zentrum für Infektionsforschung; Novo Nordisk; Bundesministerium für Bildung und Forschung; Medpace; Mundipharma Research Limited; Gilead Sciences; Daiichi Sankyo Europe; Asahi Kasei Pharma Corporation; Sanofi; Pfizer","keywords":"Clinical Practice; Antifungal; Antifungal drugs; Invasive candidiasis; Critically ill; Psychological intervention; Limiting; Health care","score_opus":0.07217446437091976,"score_gpt":0.44238043005888583,"score_spread":0.37020596568796604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417032522","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877568,0.004906779,0.00029316838,0.0042938744,0.000040084236,0.0005710985,0.000032084237,0.000014854871,0.002091257],"genre_scores_gemma":[0.99677056,0.0015151247,0.00076349487,0.00045492002,0.000020759291,0.00003755865,0.000003730491,0.0000040882564,0.00042979015],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99907076,0.00005261467,0.00047426493,0.00020027482,0.0000770849,0.0001250248],"domain_scores_gemma":[0.9967131,0.0023467727,0.00019014906,0.000290909,0.00041613422,0.0000429092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006039724,0.000065793414,0.00027523265,0.000017352992,0.00010448312,0.0000061399946,0.00009426719,0.00007806212,0.0000038845683],"category_scores_gemma":[0.0041066734,0.00004227599,0.0000804896,0.00017715937,0.00020865082,0.000043314012,0.00003394241,0.00011707227,7.874743e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019624184,0.00020210668,0.9572104,0.0001536581,0.00008221951,6.944593e-7,0.00002857747,2.598698e-7,0.0077526984,0.024052173,0.002706388,0.0058483654],"study_design_scores_gemma":[0.0005033476,0.00029883167,0.9870116,0.00006069129,0.00009444291,0.0000021925234,0.00008942685,0.000025851728,0.001018467,0.001403926,0.009456249,0.000034970355],"about_ca_topic_score_codex":0.000014316229,"about_ca_topic_score_gemma":0.000049550323,"teacher_disagreement_score":0.029801162,"about_ca_system_score_codex":0.000016726806,"about_ca_system_score_gemma":0.00015327067,"threshold_uncertainty_score":0.49163684},"labels":[],"label_agreement":null},{"id":"W4417150772","doi":"10.2147/jir.s551135","title":"Exploring the Mechanism of CaoHuangGuiXiang Formula in Ameliorating Systemic Candida albicans Infection: A Study Integrating Network Pharmacology and Animal Experiments","year":2025,"lang":"en","type":"article","venue":"Journal of Inflammation Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Candida albicans; Mechanism (biology); Drug; Antifungal; Mechanism of action","score_opus":0.1319429617382998,"score_gpt":0.43714018097584545,"score_spread":0.3051972192375456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417150772","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99770564,0.00034058033,0.00039619612,0.00034716,0.00015457871,0.0006374394,2.907854e-7,0.000004186199,0.00041393607],"genre_scores_gemma":[0.9993532,0.00019006689,0.00011798746,0.000015845097,0.00021119785,0.00004498328,4.1239036e-7,0.000005540094,0.00006078074],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99795365,0.0004973759,0.00075410446,0.00011367239,0.000467416,0.00021376055],"domain_scores_gemma":[0.9984794,0.00041740105,0.00024119344,0.00011333739,0.0006970871,0.000051538613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0044205445,0.00008010697,0.00030484327,0.00037933755,0.00018033404,0.000030416046,0.000088750094,0.00003887749,0.000020329764],"category_scores_gemma":[0.0005902548,0.00005346203,0.00004548675,0.00070332264,0.00006949639,0.00024317643,0.000073571486,0.00061271834,5.3315335e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017058074,0.0001971777,0.65733284,0.00048958906,0.00022039378,0.00010567335,0.012387352,0.00026738038,0.31558964,0.0024423436,0.00018000518,0.009081794],"study_design_scores_gemma":[0.006476395,0.0035710982,0.8022,0.004194417,0.0001641043,0.000119367694,0.11159238,0.00871321,0.061954986,0.00064513664,0.00018364647,0.00018522941],"about_ca_topic_score_codex":0.00040823853,"about_ca_topic_score_gemma":0.0005860425,"teacher_disagreement_score":0.25363463,"about_ca_system_score_codex":0.00024119114,"about_ca_system_score_gemma":0.0002998362,"threshold_uncertainty_score":0.26619905},"labels":[],"label_agreement":null},{"id":"W4417227204","doi":"10.18280/ijdne.201007","title":"Protective Efficacy with Purified β-glucan Against Systemic Candidiasis","year":2025,"lang":"","type":"article","venue":"International Journal of Design & Nature and Ecodynamics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Systemic candidiasis; Invasive candidiasis; Immune system; Candida albicans; Vulvovaginal Candidiasis","score_opus":0.008992315124729354,"score_gpt":0.274309434905378,"score_spread":0.26531711978064865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417227204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8694847,0.018951407,0.102139816,0.003281881,0.003075137,0.0012999324,0.0000679059,0.000021587211,0.0016776077],"genre_scores_gemma":[0.992622,0.004287932,0.00109098,0.0007828391,0.00055475614,0.000007699799,0.000013292252,0.000030364274,0.0006100931],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9968787,0.00025061626,0.0010900624,0.00044558884,0.00095000945,0.00038506897],"domain_scores_gemma":[0.9957633,0.0006001311,0.0009082334,0.0002836725,0.002191425,0.000253216],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011699361,0.00042008693,0.0008606835,0.0007235094,0.0001677726,0.0002304654,0.0005343668,0.00061273307,0.000026390167],"category_scores_gemma":[0.0008389462,0.0003162988,0.00027946534,0.00045557073,0.00025376573,0.00041052588,0.00007738947,0.0021766233,0.0000037861118],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.1664678,0.007011381,0.23979273,0.0040743193,0.04717133,0.014053034,0.011885889,0.012084408,0.058981612,0.018153666,0.007301966,0.41302186],"study_design_scores_gemma":[0.07124162,0.013807039,0.71012235,0.07914939,0.009845421,0.00847333,0.024712447,0.04788701,0.014306742,0.011013467,0.0053788796,0.0040623434],"about_ca_topic_score_codex":0.000029451552,"about_ca_topic_score_gemma":0.00012781202,"teacher_disagreement_score":0.47032958,"about_ca_system_score_codex":0.0009043782,"about_ca_system_score_gemma":0.0018897073,"threshold_uncertainty_score":0.9999289},"labels":[],"label_agreement":null},{"id":"W4417239819","doi":"10.1128/mbio.02141-25","title":"Immunomodulatory functions of fungal melanins in respiratory infections","year":2025,"lang":"en","type":"review","venue":"mBio","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Columbia College","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Antifungal; Immune system; Respiratory tract; Melanin; Virulence; Pathogenicity; Respiratory tract infections","score_opus":0.04454848308792451,"score_gpt":0.3624773418982764,"score_spread":0.3179288588103519,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417239819","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00073305337,0.98356575,0.00003375669,0.000008485008,0.00037460885,0.0006835255,0.0000970085,0.00004298617,0.014460852],"genre_scores_gemma":[0.0025663392,0.9906504,0.000013080914,0.000047288515,0.00009555141,0.000079648074,0.00007612256,0.00002402645,0.0064475136],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983022,0.00015104174,0.00077541434,0.00037074415,0.00018243547,0.00021812231],"domain_scores_gemma":[0.99871796,0.00020142076,0.00018513748,0.0007238204,0.000105445746,0.0000662189],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003673186,0.00025822292,0.0015110169,0.00050836976,0.00006094265,0.0000065141394,0.00010914551,0.0003927084,0.00022316618],"category_scores_gemma":[0.0003316994,0.00022094963,0.0006131904,0.00079945975,0.00012366951,0.000043650583,0.00006214168,0.000663965,0.00008862214],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005854602,0.0012048745,0.03982228,0.07687682,0.00053599174,0.00007634452,0.000076172386,7.453791e-7,0.00003533377,0.000750649,0.006698002,0.87386423],"study_design_scores_gemma":[0.00029852852,0.00017211481,0.017735675,0.015525102,0.00067200675,0.0000054292736,0.00003235623,3.12677e-7,0.0000035621836,0.000014174333,0.96538055,0.00016018837],"about_ca_topic_score_codex":0.00006388739,"about_ca_topic_score_gemma":0.00034626227,"teacher_disagreement_score":0.95868254,"about_ca_system_score_codex":0.0003062061,"about_ca_system_score_gemma":0.0015459765,"threshold_uncertainty_score":0.9010064},"labels":[],"label_agreement":null},{"id":"W4417304690","doi":"10.1038/s41467-025-66482-5","title":"Sterol-C4-methyl-oxidase Erg251 governs Candida albicans hypoxic growth, commensalism and virulence","year":2025,"lang":"en","type":"article","venue":"Nature Communications","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University; Population Health Research Institute; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Brock University; Canadian Institute for Advanced Research; Canadian Institutes of Health Research; Genome Canada; Foundation for the National Institutes of Health","keywords":"Candida albicans; Virulence; Corpus albicans; Commensalism; In vitro; Colonization; Sterol","score_opus":0.012753335318087741,"score_gpt":0.3238051073659088,"score_spread":0.31105177204782103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417304690","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8444296,0.034523904,0.0003519983,0.07873133,0.00027225798,0.0009378737,0.00025514874,0.00021200543,0.040285897],"genre_scores_gemma":[0.98338753,0.0038572825,0.0024903896,0.007467764,0.000028949167,0.000041586703,0.00009504235,0.000015453807,0.0026159822],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987094,0.00018327628,0.0003100929,0.0003199143,0.00022838956,0.0002489695],"domain_scores_gemma":[0.9966024,0.00065210817,0.00008626169,0.002234652,0.00027403038,0.00015055908],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033827432,0.00018882833,0.000330525,0.000109997694,0.00040830276,0.000041956748,0.0006025472,0.00032554226,0.000049045095],"category_scores_gemma":[0.00074492337,0.0001694948,0.00009575458,0.00047148342,0.00043841262,0.00011833613,0.00038726686,0.0012922897,0.000015362097],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005450655,0.0014172159,0.70273346,0.0005259445,0.0005206371,0.000026236321,0.0014238638,5.58944e-7,0.04069123,0.15054487,0.08600498,0.015565907],"study_design_scores_gemma":[0.0015681015,0.00011233565,0.81005055,0.000385415,0.00030320298,0.000015904692,0.00066728576,0.00022065028,0.0016672243,0.0020303868,0.18268728,0.0002916359],"about_ca_topic_score_codex":0.0003306341,"about_ca_topic_score_gemma":0.003663974,"teacher_disagreement_score":0.1485145,"about_ca_system_score_codex":0.00014956572,"about_ca_system_score_gemma":0.00019475844,"threshold_uncertainty_score":0.69117975},"labels":[],"label_agreement":null},{"id":"W4417519291","doi":"10.64898/2025.12.19.695452","title":"Crosstalk between the Ino80 complex and TOR signaling drives fungal adaptation to hypoxia through chromatin remodeling","year":2025,"lang":"","type":"article","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Montreal Heart Institute; Université de Montréal","funders":"","keywords":"Crosstalk; Chromatin; Adaptation (eye); Chromatin remodeling; Transcriptome; TOR signaling; Mutant; Gene; Metabolic adaptation","score_opus":0.031805505224106495,"score_gpt":0.2734650105504563,"score_spread":0.2416595053263498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417519291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9623284,0.0042976765,0.028837431,0.0018936009,0.0005198057,0.0016858656,0.000179089,0.00019833566,0.000059826536],"genre_scores_gemma":[0.98793066,0.0003009409,0.0094568655,0.0013497558,0.00076955603,0.00006199065,5.9353556e-7,0.000092729795,0.00003689698],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9951346,0.00038400703,0.0013207671,0.001380527,0.0007342548,0.0010458272],"domain_scores_gemma":[0.99629414,0.0006864005,0.00038543163,0.0013373361,0.0008779655,0.00041874294],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015951055,0.00073361536,0.0010578866,0.00021938256,0.00129695,0.00048315013,0.0004955019,0.00041409218,0.00012025127],"category_scores_gemma":[0.0013165422,0.00064452237,0.00021240735,0.0015386229,0.0005895555,0.00052537,0.0003170373,0.0007577633,0.00006379021],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003222597,0.00014078736,0.08404474,0.0007738478,0.00033931006,0.000027483327,0.0005424762,0.00013115547,0.9122223,0.0010265005,0.00032524546,0.00010385643],"study_design_scores_gemma":[0.001581778,0.00029616308,0.8640583,0.0019241807,0.0006652299,2.6781091e-8,0.0005865355,0.005791462,0.12086167,0.000013219735,0.0034649097,0.00075652834],"about_ca_topic_score_codex":0.00018307651,"about_ca_topic_score_gemma":0.000020046164,"teacher_disagreement_score":0.7913607,"about_ca_system_score_codex":0.00045326553,"about_ca_system_score_gemma":0.0009872053,"threshold_uncertainty_score":0.9996006},"labels":[],"label_agreement":null},{"id":"W572885427","doi":"10.1007/s40262-015-0297-8","title":"Therapeutic Drug Monitoring of Voriconazole in the Management of Invasive Fungal Infections: A Critical Review","year":2015,"lang":"en","type":"review","venue":"Clinical Pharmacokinetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Voriconazole; Therapeutic drug monitoring; CYP2C19; Medicine; Intensive care medicine; Adverse effect; Drug; Pharmacogenetics; Internal medicine; Aspergillosis; Pharmacotherapy; Pharmacology; Antifungal; Immunology; Biology; Genotype","score_opus":0.2798601075472593,"score_gpt":0.532563529680355,"score_spread":0.2527034221330957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W572885427","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003030224,0.99549556,0.000015745532,0.0002094377,0.000615699,0.0018353586,0.000028515373,0.000013623917,0.0014830298],"genre_scores_gemma":[0.0064952336,0.99238116,0.00021366551,0.00029277438,0.00033611464,0.00010440491,0.000017205748,0.000031732397,0.00012772928],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9953668,0.00088356383,0.002423469,0.00042040335,0.00063174043,0.00027399985],"domain_scores_gemma":[0.99554235,0.0026272214,0.0005199061,0.0007672878,0.0003931151,0.00015009797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034908052,0.0003322673,0.0025658244,0.000096965516,0.00002478238,0.0000066845814,0.00042184023,0.00019554718,0.00007322676],"category_scores_gemma":[0.000835029,0.00021020282,0.0009011586,0.0006924041,0.00042219827,0.00003814819,0.00013701372,0.0011355936,0.000026049034],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059053487,0.0018029733,0.009942269,0.28651336,0.00056269695,0.00011662666,0.000043829612,2.6053712e-7,6.398093e-7,0.0002549992,0.0027156472,0.6979877],"study_design_scores_gemma":[0.0012037704,0.00046154897,0.005433814,0.1777647,0.012806238,0.000034729994,0.0001716159,0.0000030137019,0.000006376543,0.00028517816,0.80151683,0.0003121758],"about_ca_topic_score_codex":0.0000037765535,"about_ca_topic_score_gemma":0.0000010233244,"teacher_disagreement_score":0.7988012,"about_ca_system_score_codex":0.00008231287,"about_ca_system_score_gemma":0.00040061728,"threshold_uncertainty_score":0.85718226},"labels":[],"label_agreement":null},{"id":"W603429933","doi":"10.1503/cmaj.141025","title":"Voriconazole-induced periostitis","year":2015,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Voriconazole; Medicine; Periostitis; Surgery; Anesthesia; Dermatology","score_opus":0.021619314357374516,"score_gpt":0.27667714391171094,"score_spread":0.2550578295543364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W603429933","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9211645,0.00024233252,0.00006191768,0.04411592,0.0011127183,0.00009318481,0.000008191318,0.000022675342,0.033178564],"genre_scores_gemma":[0.9847059,0.000043250184,0.00008382399,0.011073283,0.0016760916,0.0000017617301,0.0000062326985,0.000010148405,0.002399484],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99760693,0.00008892494,0.00030512095,0.00012476942,0.0014747048,0.00039952956],"domain_scores_gemma":[0.9952928,0.0000599911,0.00009584568,0.000104737985,0.00071772264,0.0037289297],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016434314,0.000087050976,0.00021918937,0.00010254492,0.000140145,0.000050467614,0.00009977484,0.00030994756,0.0031133546],"category_scores_gemma":[0.0059556128,0.000075610755,0.000096641365,0.00018098687,0.000025025085,0.0000974615,0.000008047841,0.0008060704,0.0005202525],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024800167,0.000031410447,0.7711204,0.0000072288412,0.000060177787,0.0009912436,0.00027790235,2.103312e-7,0.000054051063,0.00022437355,0.20919946,0.018008733],"study_design_scores_gemma":[0.0017068264,0.00016663228,0.6077682,0.0000769102,0.00003192029,0.00064205925,0.0010068099,0.00009040895,0.00003685834,0.00019521634,0.38814643,0.000131768],"about_ca_topic_score_codex":0.0023382448,"about_ca_topic_score_gemma":0.02736936,"teacher_disagreement_score":0.17894696,"about_ca_system_score_codex":0.0018120826,"about_ca_system_score_gemma":0.008730914,"threshold_uncertainty_score":0.9977979},"labels":[],"label_agreement":null},{"id":"W638544933","doi":"10.1016/s1166-8598(20)30164-2","title":"10.1016/s1166-8598(20)30164-2","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Psychology","score_opus":0.007349358776014165,"score_gpt":0.20614572719505714,"score_spread":0.19879636841904297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W638544933","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011208764,0.00014616415,0.0000016978045,0.00069646304,0.0000013861865,0.0002767285,0.000014758875,0.00013597259,0.9875181],"genre_scores_gemma":[0.0050664516,9.1020615e-7,0.00014371557,0.00018525164,0.00018361484,0.0000109910925,0.000025661086,0.00002462336,0.9943588],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988588,0.000029346578,0.00021558089,0.00030884836,0.00026947656,0.00031792483],"domain_scores_gemma":[0.9991221,0.000043869626,0.00002113965,0.00048051518,0.0000723644,0.0002600351],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00017755428,0.00014876938,0.00027836332,0.000051565406,0.00007037589,0.000016750793,0.000112034475,0.000086374435,0.99808437],"category_scores_gemma":[0.00008658055,0.00012734835,0.00011075376,0.00020237369,0.000060069797,0.0000628136,0.000022157798,0.0001555411,0.99493545],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007986987,0.00015274476,0.000018243045,0.0000330524,0.000029043897,0.00003916836,0.000024697925,0.000003974682,0.0007278407,0.000001097858,0.4917872,0.50638425],"study_design_scores_gemma":[0.00045895265,0.0003002015,0.0020508752,0.00005102734,0.000042115527,0.000011541297,0.0000029514404,0.00004823811,0.00026701702,0.000008563552,0.9966168,0.00014171941],"about_ca_topic_score_codex":0.000017511242,"about_ca_topic_score_gemma":0.0000010621295,"teacher_disagreement_score":0.5062425,"about_ca_system_score_codex":0.00006103681,"about_ca_system_score_gemma":0.000073291754,"threshold_uncertainty_score":0.51931155},"labels":[],"label_agreement":null},{"id":"W648597035","doi":"10.71781/30000","title":"Sensibilisation à l'Aspergillus fumigatus et devenir fonctionnel de l'asthme : Aspergillus et calibre bronchique","year":2006,"lang":"fr","type":"dissertation","venue":"Open MIND","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Aspergillus fumigatus; Aspergillus; Medicine; Microbiology; Biology","score_opus":0.03345778545394939,"score_gpt":0.35044433814692644,"score_spread":0.31698655269297704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W648597035","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8938612,0.001840243,0.0016382963,0.001251469,0.002355273,0.0023057598,0.00044531206,0.000019660089,0.09628279],"genre_scores_gemma":[0.8669624,0.00037813035,0.0077105206,0.0007294013,0.0009741717,0.00007670111,0.009123175,0.00016645988,0.11387905],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99369735,0.0010237405,0.0014910995,0.0017220656,0.0008836361,0.0011821389],"domain_scores_gemma":[0.9962425,0.00048493617,0.000700401,0.0011804029,0.00082409696,0.0005676207],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.002437327,0.0009981005,0.0013881557,0.00023706415,0.0004761306,0.0004207005,0.00058295584,0.001492017,0.0060697617],"category_scores_gemma":[0.0012843643,0.0010102344,0.00051029533,0.000567534,0.0002756501,0.00084871874,0.0001871087,0.0016359233,0.0013263349],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012392617,0.0058123996,0.20237608,0.003553382,0.0019845362,0.0027496829,0.06151297,0.0063197734,0.17396514,0.008951989,0.02945606,0.49092537],"study_design_scores_gemma":[0.0061188955,0.00111491,0.7880817,0.00448426,0.0014637097,0.0002600474,0.022528788,0.004750019,0.04167161,0.0012675783,0.1259056,0.00235289],"about_ca_topic_score_codex":0.012110122,"about_ca_topic_score_gemma":0.12933211,"teacher_disagreement_score":0.5857056,"about_ca_system_score_codex":0.0017793325,"about_ca_system_score_gemma":0.0047958097,"threshold_uncertainty_score":0.99980426},"labels":[],"label_agreement":null},{"id":"W6901583858","doi":"10.6068/dp14ba88cfe9141","title":"Trend 1976 - 2009. Statistics Canada. CANSIM: Agriculture - Food and Nutrition | Country: Canada | Table: Nutrients in the food supply, by source of nutritional equivalent and commodity | Variable: Tomatoes, pulp, paste and puree, Riboflavin, Nutrients available adjusted for losses | Units: Milligrams, 1976-2009. Data-Planet™ Statistical Ready Reference by Conquest Systems, Inc. Dataset-ID: 075-001-005.","year":2015,"lang":"en","type":"other","venue":"Data Planet","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Agriculture; Economic statistics; Census; Official statistics; Commodity; Food security; Summary statistics; Food supply","score_opus":0.0258938209032235,"score_gpt":0.24312080738756184,"score_spread":0.21722698648433833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901583858","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000039826373,0.024852786,0.000016751846,0.000016521853,0.00014603022,0.0020626727,0.97262186,0.00002402227,0.00021953962],"genre_scores_gemma":[0.00042301515,0.0062751085,0.00015599655,0.00026646937,0.00014426028,0.0000701034,0.99164754,0.00008557299,0.00093195547],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99576795,0.0003238509,0.0009062469,0.0010874032,0.0012072405,0.0007073068],"domain_scores_gemma":[0.9965247,0.00087568717,0.0005586309,0.0013820903,0.00016987465,0.0004890344],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00060304924,0.0006496393,0.0011815896,0.00008291739,0.00018995459,0.00014862783,0.0007384146,0.00050005526,0.00030395604],"category_scores_gemma":[0.00017943856,0.00050777744,5.2930636e-7,0.0003470858,0.00038247122,0.0002050276,0.00029873292,0.000646092,0.0000012259035],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006756298,0.0006354246,0.00074437365,0.0046359412,0.00027485917,0.000072737916,0.0000040606274,3.667326e-7,0.000010700955,0.00022483637,0.9926759,0.00004519699],"study_design_scores_gemma":[0.0042938706,0.0006600428,0.00006463597,0.00044082446,0.0006159654,0.00016996445,0.0005493372,0.0002413402,5.282602e-7,0.0000021156436,0.9924394,0.0005219906],"about_ca_topic_score_codex":0.99019957,"about_ca_topic_score_gemma":0.99480045,"teacher_disagreement_score":0.01902567,"about_ca_system_score_codex":0.0001695265,"about_ca_system_score_gemma":0.0032456722,"threshold_uncertainty_score":0.9997374},"labels":[],"label_agreement":null},{"id":"W6901835223","doi":"10.60692/k6d2k-zpk22","title":"Genomic Analysis of the Basal Lineage Fungus Rhizopus oryzae Reveals a Whole-Genome Duplication","year":2009,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Gene duplication; Gene; Rhizopus oryzae; Genome; Gene family; Fungal protein; Pyricularia; Aspergillus oryzae; Gene dosage","score_opus":0.024075747095688053,"score_gpt":0.23751404101507373,"score_spread":0.21343829391938568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901835223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923033,0.000015971102,0.0044717123,0.0001894363,0.00007317818,0.0005679447,0.0002122298,0.00006562207,0.0021005652],"genre_scores_gemma":[0.9986711,3.7518285e-7,0.000109190594,0.0004580214,0.00005631412,0.000013438938,0.00010070095,0.0000053379063,0.00058552047],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99836475,0.000063110085,0.0008651518,0.00016029262,0.00035796425,0.00018875921],"domain_scores_gemma":[0.99830806,0.000009053338,0.00048699326,0.00081791374,0.00029369438,0.00008430791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052388676,0.00014770363,0.00045670735,0.00030035505,0.000102017526,0.000038131093,0.00016635655,0.00011254115,0.000032966665],"category_scores_gemma":[0.000052036517,0.00009643377,0.00030069138,0.00086966524,0.000037960654,0.00021694998,0.000026184125,0.000109566776,0.0001741507],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000295978,0.000009872221,0.97885966,0.0003330998,0.0003375997,0.0000012988645,0.016887957,0.00021072282,0.002583381,0.00014227367,0.000072756484,0.0002654249],"study_design_scores_gemma":[0.00051767845,0.00005965471,0.994137,0.00007723449,0.00060003286,0.000004532103,0.0021483172,0.0016406775,0.0005698758,9.865508e-7,0.00015216446,0.000091885646],"about_ca_topic_score_codex":0.000006261926,"about_ca_topic_score_gemma":7.376175e-7,"teacher_disagreement_score":0.015277325,"about_ca_system_score_codex":0.00017130817,"about_ca_system_score_gemma":0.000063796164,"threshold_uncertainty_score":0.3932455},"labels":[],"label_agreement":null},{"id":"W6902183023","doi":"10.6084/m9.figshare.26682730","title":"Additional file 1 of Age difference of patients with and without invasive aspergillosis: a systematic review and meta-analysis","year":2024,"lang":"en","type":"article","venue":"Open MIND","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Funnel plot; Table (database); Checklist; Outlier; Meta-analysis; Plot (graphics)","score_opus":0.049057990347932824,"score_gpt":0.3062353160893459,"score_spread":0.25717732574141305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902183023","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21581784,0.049007174,0.00002679642,0.00030537986,0.00000879734,0.006499447,0.72001344,0.00000463771,0.008316497],"genre_scores_gemma":[0.9848042,0.00018749281,0.0020101832,0.00008572228,0.0000022885768,0.00023879259,0.0067122504,0.000007657136,0.005951376],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9991377,0.000056177276,0.00030654517,0.00022798403,0.00021154372,0.000060042043],"domain_scores_gemma":[0.9990418,0.0004281417,0.00012949928,0.00021913779,0.0001296035,0.000051826817],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001223261,0.00009580284,0.0012755082,0.00005144215,0.000016720549,0.000019911547,0.00006283397,0.00002440208,0.33635366],"category_scores_gemma":[0.00048527482,0.000051977593,0.00013905462,0.00023497718,0.00010760413,0.000066746616,0.000049727096,0.000050673632,0.000009669218],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038524583,0.0007634655,0.037602365,0.61735475,0.25194183,0.000068509165,0.0012998572,3.8735132e-7,0.00008186636,0.000035903446,0.089984074,0.00048176633],"study_design_scores_gemma":[0.00039458027,0.00049174024,0.18660364,0.039206497,0.77206254,0.0000057867255,0.00032024877,0.000023397322,0.00008613272,0.00002557919,0.0005649202,0.00021493508],"about_ca_topic_score_codex":0.000010224009,"about_ca_topic_score_gemma":0.0001248174,"teacher_disagreement_score":0.7689864,"about_ca_system_score_codex":0.000008282969,"about_ca_system_score_gemma":0.00006999172,"threshold_uncertainty_score":0.664253},"labels":[],"label_agreement":null},{"id":"W6902250888","doi":"10.6084/m9.figshare.26682730.v1","title":"Additional file 1 of Age difference of patients with and without invasive aspergillosis: a systematic review and meta-analysis","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Funnel plot; Table (database); Checklist; Outlier; Meta-analysis; Plot (graphics)","score_opus":0.04486347481456673,"score_gpt":0.273762760509178,"score_spread":0.2288992856946113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902250888","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00040154433,0.015112865,2.1953043e-7,0.000018388615,5.659795e-7,0.00051057513,0.98370886,0.00000814329,0.00023882206],"genre_scores_gemma":[0.38786736,0.00006054982,0.00011483657,0.00015786914,0.0000031673385,0.00069629296,0.60948896,0.000008598652,0.0016023845],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9992227,0.000038523583,0.00025216554,0.00019092842,0.00023327876,0.00006240237],"domain_scores_gemma":[0.99883026,0.0006037815,0.00012086769,0.00019325656,0.00020047142,0.00005136634],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000027616425,0.000100431476,0.0010640522,0.000058123554,0.000014328358,0.000007998081,0.00003560334,0.000029246365,0.8844609],"category_scores_gemma":[0.0022070599,0.00005583816,0.0001966117,0.00024941404,0.000024030785,0.000041996744,0.000027023314,0.000058711823,0.000022465118],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014165501,0.00004494566,0.0007151624,0.4905452,0.020640893,0.000007499621,0.00005078067,4.5421707e-8,0.0000012695982,0.000002204577,0.48797345,0.0000043554032],"study_design_scores_gemma":[0.00024819054,0.00036805478,0.31863573,0.27091917,0.40812072,0.00000542913,0.00009247173,0.000034212964,0.000023097731,0.000018213554,0.0012935934,0.00024110836],"about_ca_topic_score_codex":0.0000018890494,"about_ca_topic_score_gemma":0.000029453702,"teacher_disagreement_score":0.88443846,"about_ca_system_score_codex":0.000008402704,"about_ca_system_score_gemma":0.000052705516,"threshold_uncertainty_score":0.2642216},"labels":[],"label_agreement":null},{"id":"W6920252192","doi":"10.60692/6tkc0-wfc47","title":"Is Natural Population of Candida tropicalis Sexual, Parasexual, and/or Asexual?","year":2021,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Candida tropicalis; Sexual reproduction; Asexual reproduction; Genetic diversity; Population; Reproduction; Natural population growth; Adaptation (eye); Asexuality","score_opus":0.04451626014541444,"score_gpt":0.27562553458878475,"score_spread":0.23110927444337032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920252192","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99843514,0.00003201777,0.0005356741,0.000111092704,0.00015359075,0.00022373737,0.00012229542,0.000054775417,0.00033166952],"genre_scores_gemma":[0.9984098,6.3933163e-7,0.0002365363,0.00034311388,0.000053074502,0.000009279766,0.00012751734,0.0000062190206,0.0008137982],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99873286,0.000036088113,0.00059226906,0.00015647225,0.00032463577,0.00015765762],"domain_scores_gemma":[0.99910426,0.000012917304,0.00019593626,0.00032930248,0.0002612273,0.000096332085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014257796,0.0001292037,0.00034354627,0.000067755245,0.000073417476,0.000043406984,0.000037057733,0.00010005472,0.00008149274],"category_scores_gemma":[0.00008677916,0.000091376445,0.000047204412,0.00020255968,0.00003756699,0.0003317484,0.000028685414,0.0000966077,0.000039077753],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003732528,0.000005176556,0.9841243,0.001375436,0.000050027647,0.00001262766,0.012821023,0.0000010044569,0.000046014855,0.00007077003,0.00025548518,0.00086488744],"study_design_scores_gemma":[0.0012802783,0.00013164536,0.97595143,0.0001809355,0.00007060191,0.000093408955,0.019717108,0.00070514844,0.00149391,6.42265e-7,0.0002523898,0.0001225017],"about_ca_topic_score_codex":0.0000843836,"about_ca_topic_score_gemma":0.000009497898,"teacher_disagreement_score":0.008172866,"about_ca_system_score_codex":0.00007603593,"about_ca_system_score_gemma":0.000069146394,"threshold_uncertainty_score":0.3726223},"labels":[],"label_agreement":null},{"id":"W6920402751","doi":"10.60692/75p60-h8v38","title":"Chemogenomic Profiling of the Fungal Pathogen Candida albicans","year":2018,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Candida albicans; Caspofungin; Fluconazole; Antifungal drug; Corpus albicans; Gene; Drug resistance; Drug","score_opus":0.026266948359481682,"score_gpt":0.22467488272934039,"score_spread":0.1984079343698587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920402751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98703027,0.0000033346812,0.0011640496,0.00003914057,0.00021119635,0.00045950132,0.00009860267,0.000043593842,0.010950335],"genre_scores_gemma":[0.9992312,5.7057353e-8,0.00017468713,0.00013435267,0.00012254308,0.000012555466,0.000007727782,0.0000060012703,0.0003108509],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99899495,0.000030714324,0.00045611666,0.00009638481,0.00025796998,0.0001638718],"domain_scores_gemma":[0.99902415,0.0000037951393,0.00021767347,0.00043713162,0.00025778424,0.00005945351],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002992208,0.00009996155,0.00020713342,0.00005524207,0.00010782632,0.00001793199,0.00010715006,0.000072256065,0.000047731563],"category_scores_gemma":[0.000037227965,0.00005997382,0.00010206575,0.0001624382,0.0001018608,0.00013582002,0.00003958279,0.00007407642,0.00018695625],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016326502,0.0000017310265,0.9816646,0.00042420143,0.000028790499,7.2591644e-7,0.01660799,0.0000010762603,0.00081388257,0.00009151537,0.00004563303,0.00015658494],"study_design_scores_gemma":[0.0009946462,0.00010450747,0.9322629,0.0002826064,0.00007556014,0.000047810787,0.012325649,0.00056815747,0.052899975,8.6882653e-7,0.00032108286,0.00011621149],"about_ca_topic_score_codex":0.000013161836,"about_ca_topic_score_gemma":0.0000014871255,"teacher_disagreement_score":0.052086093,"about_ca_system_score_codex":0.00010999866,"about_ca_system_score_gemma":0.00013123633,"threshold_uncertainty_score":0.24456613},"labels":[],"label_agreement":null},{"id":"W6920491491","doi":"10.60692/fy6gb-r7x11","title":"Cinnamomum zeylanicum bark essential oil induces cell wall remodelling and spindle defects in Candida albicans","year":2018,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Regina Qu'Appelle Health Region; University of Regina","funders":"","keywords":"Essential oil; Candida albicans; Cell wall; Bark (sound); Cinnamaldehyde; Corpus albicans; Cell; Viability assay","score_opus":0.021205306715461617,"score_gpt":0.2275679740964956,"score_spread":0.20636266738103398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920491491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9846219,0.000015731388,0.0019569462,0.00003947022,0.0001841794,0.00020263354,0.000016232341,0.000070436516,0.012892517],"genre_scores_gemma":[0.99901277,0.0000015520282,0.00014583136,0.00018788138,0.00013439392,0.000011945362,0.000016311775,0.000010592125,0.0004787487],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986041,0.000046747133,0.0005561224,0.00020742281,0.0002853786,0.00030019233],"domain_scores_gemma":[0.99920183,0.0000080431655,0.000170745,0.00030585658,0.00017474347,0.00013875702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003996972,0.00017423923,0.00031491875,0.00020323474,0.00011717512,0.000078684185,0.00007560503,0.00015456168,0.00003725244],"category_scores_gemma":[0.000022437689,0.00014071136,0.00005505069,0.00020902084,0.00007311076,0.00040626162,0.000037366397,0.00015356528,0.0002062964],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007472835,0.000015345313,0.9024771,0.0026565932,0.00003941482,0.000023162991,0.092374,0.000026423617,0.0007195683,0.00008814002,0.00015244978,0.0006805437],"study_design_scores_gemma":[0.0079949945,0.0006447414,0.89787227,0.0023482295,0.00019558327,0.00012581913,0.044268135,0.02451545,0.02021148,0.0000067703886,0.0009171305,0.0008994187],"about_ca_topic_score_codex":0.00018813853,"about_ca_topic_score_gemma":0.0000396857,"teacher_disagreement_score":0.048105862,"about_ca_system_score_codex":0.00012655457,"about_ca_system_score_gemma":0.00010064733,"threshold_uncertainty_score":0.57380426},"labels":[],"label_agreement":null},{"id":"W6920521932","doi":"10.60692/zf17x-jsh80","title":"Clonal Expansion and Emergence of Environmental Multiple-Triazole-Resistant Aspergillus fumigatus Strains Carrying the TR34/L98H Mutations in the cyp51A Gene in India","year":2012,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Aspergillus fumigatus; Genotype; Itraconazole; Strain (injury); Microsatellite; Crop; Population; Gene; Biological dispersal","score_opus":0.029488377342801256,"score_gpt":0.23476505864026287,"score_spread":0.20527668129746163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920521932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983005,0.00008661345,0.00025631225,0.000040006897,0.000096618154,0.00066367746,0.0001698161,0.0000121259845,0.00037432066],"genre_scores_gemma":[0.99971277,0.0000034378877,0.00006597676,0.00007518414,0.000041625313,0.00004607556,0.000039245715,0.0000056932886,0.0000099886865],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998442,0.00013184577,0.0006784003,0.0001062536,0.00039296158,0.00024854363],"domain_scores_gemma":[0.9994003,0.00003812785,0.00019567118,0.00027499674,0.000025741168,0.00006513428],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008454985,0.00013610006,0.00022179016,0.00014064835,0.00011597287,0.0000203992,0.00009596572,0.000084276806,0.000020582596],"category_scores_gemma":[0.00004907441,0.000079602614,0.000060411006,0.00020212165,0.00010301257,0.00037890935,0.000031087104,0.00016665923,0.000015647982],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016433457,0.000013522952,0.8646489,0.00016488314,0.000013506447,0.0000029688463,0.13344577,0.00003071218,0.0011203724,0.000065383436,0.0000033283952,0.0003263364],"study_design_scores_gemma":[0.0009904373,0.00003470032,0.8814584,0.000097013326,0.0000237591,0.000019458234,0.1159755,0.0005863394,0.00072981924,5.610444e-7,0.000012219846,0.00007179253],"about_ca_topic_score_codex":0.000040420953,"about_ca_topic_score_gemma":0.000009217114,"teacher_disagreement_score":0.017470269,"about_ca_system_score_codex":0.000090067704,"about_ca_system_score_gemma":0.0000389871,"threshold_uncertainty_score":0.32461002},"labels":[],"label_agreement":null},{"id":"W6925008049","doi":"10.17605/osf.io/pt9xk","title":"Psychosocial Determinants Associated with the Incarceration of First Nations Male Youth in Australia: A Systematic Literature Review","year":2025,"lang":"en","type":"other","venue":"Open Science Framework","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Psychosocial; Vulnerability (computing); Mental health; Systematic review; Coping (psychology); Poison control; Suicide prevention; Empirical evidence","score_opus":0.029795052001526223,"score_gpt":0.36522393449438156,"score_spread":0.33542888249285535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6925008049","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011659693,0.037700634,0.00039408516,0.0048293825,0.0006785778,0.022213588,0.00063393655,0.00007632691,0.9218138],"genre_scores_gemma":[0.4333742,0.0055437796,0.00072765385,0.00075226894,0.00007695612,0.00022597607,0.00004747968,0.00005846917,0.55919325],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99818695,0.00013630104,0.00038937115,0.000418745,0.0006455163,0.00022314186],"domain_scores_gemma":[0.9982214,0.00024942952,0.00044992357,0.0007458692,0.0002797572,0.000053596767],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015604121,0.00018322689,0.0007515782,0.00021680813,0.00022214137,0.00014585363,0.00090060174,0.00028366662,0.00030614485],"category_scores_gemma":[0.0038134798,0.00010482484,0.00007135582,0.002877978,0.0004561125,0.00010696095,0.000114221875,0.00048091175,0.000010270812],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031217077,0.0013047381,0.34700954,0.39879447,0.0003452779,0.00016372801,0.009529887,0.000002395623,0.000019965491,0.00531957,0.23661608,0.0005821477],"study_design_scores_gemma":[0.0003081984,0.00009483474,0.016846951,0.9808768,0.00035687603,0.0000030449391,0.0005798905,0.000010543922,0.000005872917,0.00007873243,0.00066069106,0.00017757746],"about_ca_topic_score_codex":0.00015925808,"about_ca_topic_score_gemma":0.011338945,"teacher_disagreement_score":0.58208233,"about_ca_system_score_codex":0.0001547378,"about_ca_system_score_gemma":0.00055186125,"threshold_uncertainty_score":0.6327397},"labels":[],"label_agreement":null},{"id":"W6926968009","doi":"10.25549/wpacards-m103105","title":"WPA block face card for household census (block 759) of Cimarron, Wilton Streets, in Los Angeles","year":2012,"lang":"en","type":"dataset","venue":"University of Southern California Digital Library","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Census; Block (permutation group theory); Face (sociological concept); Quarter (Canadian coin)","score_opus":0.015565053070525114,"score_gpt":0.19824270148087839,"score_spread":0.18267764841035328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926968009","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07517936,0.0005584074,0.000003960462,0.000050326747,0.000029347555,0.00053268374,0.9232194,0.000043718686,0.00038282896],"genre_scores_gemma":[0.08962161,0.0001008435,0.000090788664,0.00003813053,0.00009588412,4.7721403e-7,0.9094024,0.000045966743,0.00060392526],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983451,0.00003573695,0.0004114061,0.00042677685,0.0003786142,0.00040238214],"domain_scores_gemma":[0.99860847,0.00013356097,0.00035303336,0.0006061208,0.000067358305,0.00023145582],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009060522,0.00035526027,0.0008705352,0.00023070956,0.000052998534,0.00001878252,0.00038174866,0.00044067667,0.000051036397],"category_scores_gemma":[0.000059951435,0.00035310976,0.00040747973,0.00020580854,0.00035177343,0.00020683413,0.00023569021,0.00034188808,0.00007271145],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014992043,0.0004956291,0.065299936,0.0016451518,0.00012154809,0.000055140976,0.000029798284,0.0000049118066,0.000028465061,9.910628e-7,0.9304594,0.0003598537],"study_design_scores_gemma":[0.0013333752,0.00014143535,0.0012668768,0.0006219797,0.00026356624,0.000005180178,0.0021506813,0.0000061685464,0.00012953504,0.00002230513,0.99372977,0.00032915457],"about_ca_topic_score_codex":0.00013995598,"about_ca_topic_score_gemma":0.0001184517,"teacher_disagreement_score":0.064033054,"about_ca_system_score_codex":0.000076272605,"about_ca_system_score_gemma":0.00025625664,"threshold_uncertainty_score":0.9998921},"labels":[],"label_agreement":null},{"id":"W6929383193","doi":"10.48550/arxiv.0904.2409","title":"Critical velocity of a clean one-dimensional superconductor","year":2009,"lang":"en","type":"preprint","venue":"arXiv (Cornell University)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Critical ionization velocity; Superconductivity; Metastability; Superfluidity; Ginzburg–Landau theory; Phase (matter); Scattering; Critical current; Critical phenomena","score_opus":0.10978646944988066,"score_gpt":0.24294725760292302,"score_spread":0.13316078815304236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929383193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99407506,0.00010498797,0.0019073089,0.00024958694,0.00016399281,0.00028154592,0.000061400504,0.00007153587,0.0030845786],"genre_scores_gemma":[0.99733526,0.00008377628,0.0010530137,0.00021637653,0.000103971346,2.126441e-7,0.000047672896,0.00001777107,0.001141933],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.9982844,0.00011168,0.00029397558,0.0008110954,0.00018053428,0.00031833487],"domain_scores_gemma":[0.9981405,0.00016103339,0.00009233003,0.0008291453,0.0005003205,0.0002766837],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002758435,0.00026441194,0.00068693096,0.00014427662,0.00007644411,0.000010416331,0.00025026524,0.00043662163,0.0005480585],"category_scores_gemma":[0.00039811808,0.00028789803,0.0004010503,0.00022194949,0.0004737952,0.00011298313,0.00029726684,0.0007975731,0.000052617608],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01333229,0.011895088,0.40418562,0.008776997,0.0021222865,0.0061003887,0.0012047951,0.0056268666,0.034989096,0.49344233,0.008184546,0.010139707],"study_design_scores_gemma":[0.004206847,0.0014001481,0.85212135,0.0025446748,0.002272099,0.00003331569,0.0010678293,0.02117862,0.012121691,0.10104032,0.00042516118,0.0015879412],"about_ca_topic_score_codex":0.00015001674,"about_ca_topic_score_gemma":0.00007865876,"teacher_disagreement_score":0.44793573,"about_ca_system_score_codex":0.00021924074,"about_ca_system_score_gemma":0.000510993,"threshold_uncertainty_score":0.9999573},"labels":[],"label_agreement":null},{"id":"W6930094634","doi":"10.5281/zenodo.11805461","title":"bel ami maupassant livre pdf","year":2024,"lang":"fr","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Filter (signal processing); Paraphernalia; Subject (documents); Frame (networking)","score_opus":0.02954329563073513,"score_gpt":0.2677028445420946,"score_spread":0.23815954891135946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930094634","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007958641,0.0061478056,0.00125564,0.0018722871,0.0010229462,0.0010422374,0.00062695245,0.0009020194,0.98633426],"genre_scores_gemma":[0.06456348,0.0019915577,0.00019422424,0.00035310647,0.0018919221,7.189147e-8,0.0020978397,0.00898698,0.9199208],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958404,0.0005194839,0.00059793453,0.0012133882,0.0008618637,0.00096693676],"domain_scores_gemma":[0.9973698,0.00003710699,0.00018624701,0.0011912334,0.0006384028,0.00057721254],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0010854917,0.0005027131,0.0006030402,0.0004553387,0.0012575199,0.0008799625,0.0010978283,0.0004514885,0.6600619],"category_scores_gemma":[0.0013777796,0.00049539603,0.00027879456,0.0008401074,0.0006558954,0.00014487938,0.0014483919,0.0012861395,0.68603003],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016918936,0.0003862161,0.000015147223,0.0019635074,0.00031389671,0.0003495999,0.00086977833,0.0000028146994,0.0017545653,0.0104958825,0.85925454,0.12442485],"study_design_scores_gemma":[0.0005988272,0.00058597734,0.0014163336,0.0016127587,0.00025859295,0.00018633259,0.00083711254,0.0002098892,0.00009907585,0.0003667351,0.9933773,0.000451058],"about_ca_topic_score_codex":0.0000615244,"about_ca_topic_score_gemma":0.0000063385714,"teacher_disagreement_score":0.13412276,"about_ca_system_score_codex":0.0007415307,"about_ca_system_score_gemma":0.000026828639,"threshold_uncertainty_score":0.9997498},"labels":[],"label_agreement":null},{"id":"W6931711449","doi":"10.5281/zenodo.7764302","title":"Families of Modular Arithmetic Progressions with an Interval of Distance Multiplicities","year":2023,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Multiset; Class (philosophy); Interval (graph theory); Arithmetic progression; Property (philosophy); Integer (computer science); Modular arithmetic; Interval arithmetic","score_opus":0.0401856397600607,"score_gpt":0.28685966658923345,"score_spread":0.24667402682917275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931711449","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9889718,0.00006600215,0.002648134,0.00017357821,0.000017438331,0.00037356737,0.00015697839,0.00032606258,0.007266418],"genre_scores_gemma":[0.9978848,0.00008126348,0.0005806959,0.000013854825,0.000022036025,5.3889643e-8,0.00045217414,0.0003228281,0.0006422852],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99885654,0.00011500376,0.00023263798,0.00024082097,0.0003587501,0.00019624663],"domain_scores_gemma":[0.99879694,0.00002198945,0.000090214926,0.0004175641,0.00057069614,0.00010259708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003508162,0.00009031457,0.0002128353,0.00016938576,0.00034961256,0.000040733285,0.00026977903,0.00003617287,0.0006880018],"category_scores_gemma":[0.00039061622,0.00007265967,0.000045610235,0.00059239165,0.00045930603,0.00012380224,0.0002336437,0.00013199683,0.00015723422],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008235195,0.004298866,0.02451166,0.007130916,0.00076899654,0.000274798,0.033338066,0.00051265844,0.3254134,0.024462204,0.030019809,0.54103345],"study_design_scores_gemma":[0.0059417607,0.009889007,0.499065,0.0028266052,0.0002573337,0.00015215468,0.039366256,0.014009819,0.040229466,0.0009414329,0.38648638,0.0008347657],"about_ca_topic_score_codex":0.000015322159,"about_ca_topic_score_gemma":0.0000016710237,"teacher_disagreement_score":0.5401987,"about_ca_system_score_codex":0.000035733843,"about_ca_system_score_gemma":0.0000067532633,"threshold_uncertainty_score":0.7533137},"labels":[],"label_agreement":null},{"id":"W6939157262","doi":"10.60692/r6j9c-xba53","title":"Clonal Expansion and Emergence of Environmental Multiple-Triazole-Resistant Aspergillus fumigatus Strains Carrying the TR34/L98H Mutations in the cyp51A Gene in India","year":2012,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Aspergillus fumigatus; Genotype; Itraconazole; Strain (injury); Microsatellite; Crop; Population; Gene; Biological dispersal","score_opus":0.029488377342801256,"score_gpt":0.23476505864026287,"score_spread":0.20527668129746163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939157262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983005,0.00008661345,0.00025631225,0.000040006897,0.000096618154,0.00066367746,0.0001698161,0.0000121259845,0.00037432066],"genre_scores_gemma":[0.99971277,0.0000034378877,0.00006597676,0.00007518414,0.000041625313,0.00004607556,0.000039245715,0.0000056932886,0.0000099886865],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998442,0.00013184577,0.0006784003,0.0001062536,0.00039296158,0.00024854363],"domain_scores_gemma":[0.9994003,0.00003812785,0.00019567118,0.00027499674,0.000025741168,0.00006513428],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008454985,0.00013610006,0.00022179016,0.00014064835,0.00011597287,0.0000203992,0.00009596572,0.000084276806,0.000020582596],"category_scores_gemma":[0.00004907441,0.000079602614,0.000060411006,0.00020212165,0.00010301257,0.00037890935,0.000031087104,0.00016665923,0.000015647982],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016433457,0.000013522952,0.8646489,0.00016488314,0.000013506447,0.0000029688463,0.13344577,0.00003071218,0.0011203724,0.000065383436,0.0000033283952,0.0003263364],"study_design_scores_gemma":[0.0009904373,0.00003470032,0.8814584,0.000097013326,0.0000237591,0.000019458234,0.1159755,0.0005863394,0.00072981924,5.610444e-7,0.000012219846,0.00007179253],"about_ca_topic_score_codex":0.000040420953,"about_ca_topic_score_gemma":0.000009217114,"teacher_disagreement_score":0.017470269,"about_ca_system_score_codex":0.000090067704,"about_ca_system_score_gemma":0.0000389871,"threshold_uncertainty_score":0.32461002},"labels":[],"label_agreement":null},{"id":"W6939731954","doi":"10.6084/m9.figshare.22608494","title":"Additional file 1 of Amino acid substitutions in specific proteins correlate with farnesol unresponsiveness in Candida albicans","year":2023,"lang":"en","type":"article","venue":"Open MIND","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec; Université de Montréal; Université Laval","funders":"","keywords":"Amino acid; Candida albicans; Farnesol; Strain (injury); Yeast; Peptide sequence; Escherichia coli","score_opus":0.03927967915849995,"score_gpt":0.29573395966295507,"score_spread":0.2564542805044551,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939731954","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86575395,0.000022248098,0.000014593224,0.00019599947,0.000025731006,0.0012172894,0.11777682,0.0000035467044,0.014989837],"genre_scores_gemma":[0.9565524,0.000010118489,0.0013435748,0.00001843336,0.000021656675,0.00043318648,0.024751173,0.000012486809,0.016856998],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9989944,0.000055329947,0.00025464088,0.00028071523,0.00020507333,0.00020985406],"domain_scores_gemma":[0.9992278,0.00031241647,0.00006756618,0.00024912477,0.000076639786,0.00006643224],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016893618,0.000100924415,0.0002709479,0.00016994977,0.000044147204,0.000014398046,0.00013217762,0.00006714637,0.56541556],"category_scores_gemma":[0.0003419853,0.00008383148,0.00003061222,0.0008712622,0.00018972688,0.00010843048,0.00005147954,0.00018029264,0.00055649533],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011392172,0.0018577145,0.11376488,0.00020042213,0.00012437729,0.0036916628,0.0034959156,0.0003145223,0.015255531,0.00022328162,0.8126421,0.037037417],"study_design_scores_gemma":[0.0010299642,0.00016004792,0.7682242,0.00082778616,0.0000079889,0.00001254547,0.0009784922,0.00006527915,0.00090680673,0.00001727789,0.22766058,0.000109044035],"about_ca_topic_score_codex":0.00023790647,"about_ca_topic_score_gemma":0.010535332,"teacher_disagreement_score":0.6544593,"about_ca_system_score_codex":0.00010121258,"about_ca_system_score_gemma":0.0006688823,"threshold_uncertainty_score":0.7152808},"labels":[],"label_agreement":null},{"id":"W6957854456","doi":"10.60692/hc6at-6nr96","title":"Chemogenomic Profiling of the Fungal Pathogen Candida albicans","year":2018,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Candida albicans; Caspofungin; Fluconazole; Antifungal drug; Corpus albicans; Gene; Drug resistance; Drug","score_opus":0.026266948359481682,"score_gpt":0.22467488272934039,"score_spread":0.1984079343698587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6957854456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98703027,0.0000033346812,0.0011640496,0.00003914057,0.00021119635,0.00045950132,0.00009860267,0.000043593842,0.010950335],"genre_scores_gemma":[0.9992312,5.7057353e-8,0.00017468713,0.00013435267,0.00012254308,0.000012555466,0.000007727782,0.0000060012703,0.0003108509],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99899495,0.000030714324,0.00045611666,0.00009638481,0.00025796998,0.0001638718],"domain_scores_gemma":[0.99902415,0.0000037951393,0.00021767347,0.00043713162,0.00025778424,0.00005945351],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002992208,0.00009996155,0.00020713342,0.00005524207,0.00010782632,0.00001793199,0.00010715006,0.000072256065,0.000047731563],"category_scores_gemma":[0.000037227965,0.00005997382,0.00010206575,0.0001624382,0.0001018608,0.00013582002,0.00003958279,0.00007407642,0.00018695625],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016326502,0.0000017310265,0.9816646,0.00042420143,0.000028790499,7.2591644e-7,0.01660799,0.0000010762603,0.00081388257,0.00009151537,0.00004563303,0.00015658494],"study_design_scores_gemma":[0.0009946462,0.00010450747,0.9322629,0.0002826064,0.00007556014,0.000047810787,0.012325649,0.00056815747,0.052899975,8.6882653e-7,0.00032108286,0.00011621149],"about_ca_topic_score_codex":0.000013161836,"about_ca_topic_score_gemma":0.0000014871255,"teacher_disagreement_score":0.052086093,"about_ca_system_score_codex":0.00010999866,"about_ca_system_score_gemma":0.00013123633,"threshold_uncertainty_score":0.24456613},"labels":[],"label_agreement":null},{"id":"W6958030900","doi":"10.60692/chfbm-xkp82","title":"Genomic Analysis of the Basal Lineage Fungus Rhizopus oryzae Reveals a Whole-Genome Duplication","year":2009,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Gene duplication; Gene; Rhizopus oryzae; Genome; Gene family; Fungal protein; Pyricularia; Aspergillus oryzae; Gene dosage","score_opus":0.024075747095688053,"score_gpt":0.23751404101507373,"score_spread":0.21343829391938568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958030900","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923033,0.000015971102,0.0044717123,0.0001894363,0.00007317818,0.0005679447,0.0002122298,0.00006562207,0.0021005652],"genre_scores_gemma":[0.9986711,3.7518285e-7,0.000109190594,0.0004580214,0.00005631412,0.000013438938,0.00010070095,0.0000053379063,0.00058552047],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99836475,0.000063110085,0.0008651518,0.00016029262,0.00035796425,0.00018875921],"domain_scores_gemma":[0.99830806,0.000009053338,0.00048699326,0.00081791374,0.00029369438,0.00008430791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052388676,0.00014770363,0.00045670735,0.00030035505,0.000102017526,0.000038131093,0.00016635655,0.00011254115,0.000032966665],"category_scores_gemma":[0.000052036517,0.00009643377,0.00030069138,0.00086966524,0.000037960654,0.00021694998,0.000026184125,0.000109566776,0.0001741507],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000295978,0.000009872221,0.97885966,0.0003330998,0.0003375997,0.0000012988645,0.016887957,0.00021072282,0.002583381,0.00014227367,0.000072756484,0.0002654249],"study_design_scores_gemma":[0.00051767845,0.00005965471,0.994137,0.00007723449,0.00060003286,0.000004532103,0.0021483172,0.0016406775,0.0005698758,9.865508e-7,0.00015216446,0.000091885646],"about_ca_topic_score_codex":0.000006261926,"about_ca_topic_score_gemma":7.376175e-7,"teacher_disagreement_score":0.015277325,"about_ca_system_score_codex":0.00017130817,"about_ca_system_score_gemma":0.000063796164,"threshold_uncertainty_score":0.3932455},"labels":[],"label_agreement":null},{"id":"W6958109250","doi":"10.60692/c9tmv-npk39","title":"Tracing the evolutionary history and global expansion of Candida auris using population genomic analyses","year":2020,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Candida auris; Clade; Phylogenetic tree; Context (archaeology); Population; Phylogeography; Phylogenetics","score_opus":0.09009381801402398,"score_gpt":0.27680781730269105,"score_spread":0.18671399928866705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958109250","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936106,0.00011177492,0.005537425,0.000053082655,0.000068053705,0.0002202056,0.00003771025,0.00003431774,0.00032682653],"genre_scores_gemma":[0.99951774,4.060962e-7,0.00026617505,0.00013798013,0.00004797845,0.0000023626974,0.00001732214,0.0000029999057,0.0000070603423],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99917245,0.000032195592,0.00041088078,0.00009034807,0.0002056906,0.000088412744],"domain_scores_gemma":[0.9994842,0.000004728667,0.0002116012,0.00014138792,0.00009426877,0.00006381036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012993433,0.00008330609,0.00019755954,0.000042046835,0.00007795389,0.000010368263,0.000035233083,0.00005250553,0.000011716198],"category_scores_gemma":[0.000027836828,0.000056380966,0.000058767593,0.00011054033,0.0000374786,0.0002540512,0.000020582314,0.000049967257,0.000008519073],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022968369,8.675865e-7,0.9802251,0.00065181556,0.000030575342,0.0000013740308,0.018073622,0.0002726445,0.00022834355,0.000026235128,0.000059389917,0.00020036598],"study_design_scores_gemma":[0.00040135882,0.000036772333,0.96697456,0.00013454231,0.000096116906,0.0000229608,0.008991139,0.023141123,0.00011465865,5.339944e-7,0.000027647626,0.000058568243],"about_ca_topic_score_codex":0.00020004778,"about_ca_topic_score_gemma":0.00000110772,"teacher_disagreement_score":0.022868479,"about_ca_system_score_codex":0.0004253357,"about_ca_system_score_gemma":0.000080309714,"threshold_uncertainty_score":0.2299149},"labels":[],"label_agreement":null},{"id":"W6958309343","doi":"10.60692/h2ef4-jzd89","title":"Emergence of Azole-Resistant Aspergillus fumigatus Strains due to Agricultural Azole Use Creates an Increasing Threat to Human Health","year":2013,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Aspergillus fumigatus; Aspergillosis; Itraconazole; Azole; Incidence (geometry); Aspergillus","score_opus":0.04947275870728557,"score_gpt":0.27218642349146266,"score_spread":0.2227136647841771,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958309343","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99516904,0.000007510693,0.000999387,0.00020347083,0.0001166545,0.0015166673,0.00018630068,0.00015786721,0.0016431],"genre_scores_gemma":[0.99813217,3.085312e-7,0.0009241905,0.00042755337,0.000077278346,0.000071286384,0.00010321781,0.000015283347,0.00024870562],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973942,0.00012500073,0.001165771,0.0002825353,0.00054517,0.00048730357],"domain_scores_gemma":[0.9977428,0.000011371989,0.00032673532,0.00061634753,0.0006443033,0.00065845606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004887436,0.00029085792,0.0006386042,0.0002509079,0.00027017487,0.00015781795,0.0001775935,0.000113068294,0.00013223942],"category_scores_gemma":[0.0000834633,0.00020567064,0.00012739375,0.00041731985,0.00004646202,0.0012643838,0.000068443216,0.00012935654,0.0003521965],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007134438,0.00005169059,0.80848074,0.0023641675,0.00014802074,0.000012390714,0.17817955,0.00015804733,0.006344281,0.00066843035,0.0017468286,0.0011324154],"study_design_scores_gemma":[0.00053851714,0.0005211611,0.93278724,0.00059745903,0.000028104767,0.00003215251,0.063111275,0.000102564714,0.0020361065,9.070525e-7,0.000028955536,0.0002155679],"about_ca_topic_score_codex":0.001757891,"about_ca_topic_score_gemma":0.00005837083,"teacher_disagreement_score":0.1243065,"about_ca_system_score_codex":0.00020135196,"about_ca_system_score_gemma":0.000110274304,"threshold_uncertainty_score":0.83870053},"labels":[],"label_agreement":null},{"id":"W6976415002","doi":"10.60692/6dnx5-s0847","title":"Is Natural Population of Candida tropicalis Sexual, Parasexual, and/or Asexual?","year":2021,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Candida tropicalis; Sexual reproduction; Asexual reproduction; Genetic diversity; Population; Reproduction; Natural population growth; Adaptation (eye); Asexuality","score_opus":0.04451626014541444,"score_gpt":0.27562553458878475,"score_spread":0.23110927444337032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6976415002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99843514,0.00003201777,0.0005356741,0.000111092704,0.00015359075,0.00022373737,0.00012229542,0.000054775417,0.00033166952],"genre_scores_gemma":[0.9984098,6.3933163e-7,0.0002365363,0.00034311388,0.000053074502,0.000009279766,0.00012751734,0.0000062190206,0.0008137982],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99873286,0.000036088113,0.00059226906,0.00015647225,0.00032463577,0.00015765762],"domain_scores_gemma":[0.99910426,0.000012917304,0.00019593626,0.00032930248,0.0002612273,0.000096332085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014257796,0.0001292037,0.00034354627,0.000067755245,0.000073417476,0.000043406984,0.000037057733,0.00010005472,0.00008149274],"category_scores_gemma":[0.00008677916,0.000091376445,0.000047204412,0.00020255968,0.00003756699,0.0003317484,0.000028685414,0.0000966077,0.000039077753],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003732528,0.000005176556,0.9841243,0.001375436,0.000050027647,0.00001262766,0.012821023,0.0000010044569,0.000046014855,0.00007077003,0.00025548518,0.00086488744],"study_design_scores_gemma":[0.0012802783,0.00013164536,0.97595143,0.0001809355,0.00007060191,0.000093408955,0.019717108,0.00070514844,0.00149391,6.42265e-7,0.0002523898,0.0001225017],"about_ca_topic_score_codex":0.0000843836,"about_ca_topic_score_gemma":0.000009497898,"teacher_disagreement_score":0.008172866,"about_ca_system_score_codex":0.00007603593,"about_ca_system_score_gemma":0.000069146394,"threshold_uncertainty_score":0.3726223},"labels":[],"label_agreement":null},{"id":"W6976638588","doi":"10.60692/rfxxf-9ss08","title":"Emergence of Azole-Resistant Aspergillus fumigatus Strains due to Agricultural Azole Use Creates an Increasing Threat to Human Health","year":2013,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Aspergillus fumigatus; Aspergillosis; Itraconazole; Azole; Incidence (geometry); Aspergillus","score_opus":0.04947275870728557,"score_gpt":0.27218642349146266,"score_spread":0.2227136647841771,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6976638588","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99516904,0.000007510693,0.000999387,0.00020347083,0.0001166545,0.0015166673,0.00018630068,0.00015786721,0.0016431],"genre_scores_gemma":[0.99813217,3.085312e-7,0.0009241905,0.00042755337,0.000077278346,0.000071286384,0.00010321781,0.000015283347,0.00024870562],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9973942,0.00012500073,0.001165771,0.0002825353,0.00054517,0.00048730357],"domain_scores_gemma":[0.9977428,0.000011371989,0.00032673532,0.00061634753,0.0006443033,0.00065845606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004887436,0.00029085792,0.0006386042,0.0002509079,0.00027017487,0.00015781795,0.0001775935,0.000113068294,0.00013223942],"category_scores_gemma":[0.0000834633,0.00020567064,0.00012739375,0.00041731985,0.00004646202,0.0012643838,0.000068443216,0.00012935654,0.0003521965],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007134438,0.00005169059,0.80848074,0.0023641675,0.00014802074,0.000012390714,0.17817955,0.00015804733,0.006344281,0.00066843035,0.0017468286,0.0011324154],"study_design_scores_gemma":[0.00053851714,0.0005211611,0.93278724,0.00059745903,0.000028104767,0.00003215251,0.063111275,0.000102564714,0.0020361065,9.070525e-7,0.000028955536,0.0002155679],"about_ca_topic_score_codex":0.001757891,"about_ca_topic_score_gemma":0.00005837083,"teacher_disagreement_score":0.1243065,"about_ca_system_score_codex":0.00020135196,"about_ca_system_score_gemma":0.000110274304,"threshold_uncertainty_score":0.83870053},"labels":[],"label_agreement":null},{"id":"W6979951768","doi":"","title":"Antifungal susceptibility of 50 Candida isolates from invasive mycoses in Chile","year":2007,"lang":"en","type":"other","venue":"Universidad de Chile","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Candida glabrata; Fluconazole; Itraconazole; Candida albicans; Candida parapsilosis; Amphotericin B; Antifungal; Mycosis","score_opus":0.010372148415238171,"score_gpt":0.2663122032016186,"score_spread":0.25594005478638043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6979951768","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54470474,0.002399639,0.000068614114,0.000041136398,0.00013991393,0.00059164234,0.0007174786,0.00010149672,0.45123535],"genre_scores_gemma":[0.86973786,0.0007677296,0.0006413999,0.00014084303,0.00023624954,0.0000016417941,0.00041576472,0.00017730224,0.12788121],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9980463,0.00008744377,0.0004081946,0.00066991494,0.00030633117,0.00048184855],"domain_scores_gemma":[0.9983562,0.00026539166,0.0002898766,0.00078837166,0.00008423577,0.00021591355],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024295639,0.0003810897,0.00093871215,0.0006921598,0.000042717496,0.000010253815,0.00025484816,0.00063405914,0.012013592],"category_scores_gemma":[0.00024105246,0.00037407156,0.0002710459,0.0004179021,0.0003445065,0.00006428609,0.00009304384,0.0005775272,0.000098241864],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082862313,0.0005433845,0.87362343,0.00049610704,0.00025945262,0.00024363407,0.0007074353,0.0000022272466,0.0078419205,0.00012375528,0.11479022,0.00053978857],"study_design_scores_gemma":[0.0040222607,0.0004704914,0.8980859,0.0030725235,0.00041697198,0.000012393884,0.002515863,0.000019031564,0.011647976,0.00024559532,0.07871529,0.0007757116],"about_ca_topic_score_codex":0.015215398,"about_ca_topic_score_gemma":0.038195156,"teacher_disagreement_score":0.32503313,"about_ca_system_score_codex":0.0003839909,"about_ca_system_score_gemma":0.00067232223,"threshold_uncertainty_score":0.99987113},"labels":[],"label_agreement":null},{"id":"W6995929737","doi":"","title":"Qc History X : esclavage et présence afro-descendante au Québec et au Canada","year":2021,"lang":"fr","type":"other","venue":"Bibliothèque et Archives nationales du Québec (Québec government)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Government (linguistics); Context (archaeology); Relation (database)","score_opus":0.013052928710681817,"score_gpt":0.2326944573823633,"score_spread":0.2196415286716815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6995929737","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07921585,0.0569676,0.0009226952,0.036240857,0.0020920136,0.0012411153,0.0011770733,0.00015734296,0.8219855],"genre_scores_gemma":[0.47035754,0.0025538893,0.0004264618,0.007105305,0.0011278996,0.00012763243,0.00017947317,0.00032541004,0.5177964],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99036896,0.0012291548,0.0016023607,0.0020413904,0.0032779803,0.0014801385],"domain_scores_gemma":[0.9829369,0.013075091,0.001201759,0.0015196159,0.0002448312,0.001021797],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.0011477538,0.0014938326,0.0016984366,0.0009397178,0.0004363642,0.00018683306,0.0012748566,0.00038798287,0.054228112],"category_scores_gemma":[0.010171336,0.0015063325,0.00081471476,0.0007840336,0.0014068118,0.00047992863,0.0007447024,0.0019184862,0.00042996404],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.0006926836,0.001286271,0.4698847,0.0026360496,0.0011313539,0.00088874495,0.013298206,0.00007971698,0.00413176,0.028388018,0.47666255,0.00091994647],"study_design_scores_gemma":[0.0011182468,0.00014792096,0.40296298,0.0022734893,0.00023380748,0.000069540125,0.0005358925,0.00014170779,0.00017902355,0.000022695955,0.59144664,0.00086805463],"about_ca_topic_score_codex":0.9989034,"about_ca_topic_score_gemma":0.9999975,"teacher_disagreement_score":0.5822167,"about_ca_system_score_codex":0.12466235,"about_ca_system_score_gemma":0.706879,"threshold_uncertainty_score":0.9997811},"labels":[],"label_agreement":null},{"id":"W6997068272","doi":"","title":"Transcriptional regulation of carbohydrate metabolism in «Candida albicans»","year":2010,"lang":"en","type":"other","venue":"Library and Archives Canada (Government of Canada)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Glycolysis; Carbohydrate metabolism; Transcriptional regulation; Transcription factor; Saccharomyces cerevisiae; Facultative; Regulation of gene expression; Metabolic pathway; Anaerobic glycolysis","score_opus":0.0033219563867268103,"score_gpt":0.15958704062263981,"score_spread":0.156265084235913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6997068272","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05001824,0.0013998495,0.00002274258,0.0012292321,0.0002405485,0.0003333878,0.000589298,0.000009114914,0.9461576],"genre_scores_gemma":[0.7597107,0.00026288276,0.0004726465,0.00025748342,0.000079730366,0.00000466128,0.000037107093,0.000062543746,0.23911221],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99797976,0.00003803256,0.0003268394,0.00024105719,0.0012281915,0.00018609488],"domain_scores_gemma":[0.9993643,0.000058984766,0.00018744454,0.00023008262,6.540169e-7,0.00015851381],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000012574138,0.00018595697,0.00049074634,0.000060747192,0.00002352477,0.0000034066684,0.000093326256,0.00008928149,0.00055409124],"category_scores_gemma":[0.0000037275413,0.00017014587,0.00004708273,0.00008252518,0.00013050123,0.00006875219,0.00002266467,0.00023388909,1.5476604e-9],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028425953,0.00018692935,0.13016054,0.0025186273,0.0003877097,0.00013151205,0.00016388114,0.000010567659,0.72462165,0.113012016,0.0184332,0.0075307763],"study_design_scores_gemma":[0.0009873009,0.00005168612,0.74325734,0.00064090814,0.000101620186,0.0000029771961,0.00035874126,0.00016971686,0.03455406,0.00065179524,0.21895476,0.00026910336],"about_ca_topic_score_codex":0.015141779,"about_ca_topic_score_gemma":0.34924814,"teacher_disagreement_score":0.7096925,"about_ca_system_score_codex":0.0000056482786,"about_ca_system_score_gemma":0.001951078,"threshold_uncertainty_score":0.99141645},"labels":[],"label_agreement":null},{"id":"W7000798020","doi":"","title":"Glyceraldehyde 3-Phosphate Dehydrogenase on the Surface of Candida albicans and Nakaseomyces glabratus Cells—A Moonlighting Protein That Binds Human Vitronectin and Plasminogen and Can Adsorb to Pathogenic Fungal Cells via Major Adhesins Als3 and Epa6","year":2024,"lang":"en","type":"article","venue":"Bristol Research (University of Bristol)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Bacterial adhesin; Candida albicans; Vitronectin; Glyceraldehyde 3-phosphate dehydrogenase; Corpus albicans; Virulence","score_opus":0.031770580901075936,"score_gpt":0.276400823713696,"score_spread":0.24463024281262008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7000798020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927305,0.0037792514,0.0000319656,0.0016087589,0.000025411395,0.0012240692,0.0003493506,0.000033735156,0.00021696562],"genre_scores_gemma":[0.9969316,0.00043090543,0.0003814302,0.000040245977,0.000022369619,0.0000028521329,0.000013946297,0.00003326207,0.0021433854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99729913,0.00028540907,0.00025746058,0.0008236709,0.00075209845,0.00058221497],"domain_scores_gemma":[0.9982525,0.00043848457,0.00011660747,0.00044419026,0.00020500588,0.00054322276],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012746436,0.00028159682,0.0005783634,0.0002967087,0.00070153625,0.00008110986,0.00021892063,0.00016258254,0.000060009555],"category_scores_gemma":[0.000102809565,0.0002576406,0.000098569544,0.000526741,0.0011035107,0.00016051283,0.00034392133,0.0005651591,0.0000050698504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017816554,0.00014314259,0.018012745,0.0011095622,0.00018895388,0.0006450232,0.0029928838,0.0000021392748,0.9706446,0.00019255043,0.0010311118,0.0032556131],"study_design_scores_gemma":[0.0038280142,0.004632915,0.09530395,0.001981833,0.00053081295,0.00017696571,0.02051684,0.0023394201,0.864833,0.0003505688,0.004566773,0.00093890546],"about_ca_topic_score_codex":0.011827077,"about_ca_topic_score_gemma":0.008646069,"teacher_disagreement_score":0.10581162,"about_ca_system_score_codex":0.00021630806,"about_ca_system_score_gemma":0.00034129067,"threshold_uncertainty_score":0.9999876},"labels":[],"label_agreement":null},{"id":"W7001485653","doi":"","title":"Journey into C. albicans Biofilms: Proteomic and functional&#13;\\ngenomic approaches to uncovering mechanisms of&#13;\\nadherence","year":2016,"lang":"en","type":"dissertation","venue":"TSpace (University of Toronto)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Amgen (Canada)","funders":"","keywords":"Biofilm; Candida albicans; Corpus albicans; Yeast; Strain (injury); Tetracycline; Pathogen; Extracellular; Fungal protein","score_opus":0.04014262638426371,"score_gpt":0.24805355144350835,"score_spread":0.20791092505924463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7001485653","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98002183,0.0006139974,0.002359245,0.0003832211,0.00017058416,0.00081725226,0.000039680737,0.00003029997,0.015563879],"genre_scores_gemma":[0.98021305,0.00041197884,0.0028799938,0.000015452786,0.00004550342,0.0000022054453,0.00007971091,0.000026130943,0.016325964],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986266,0.000046205547,0.00020455146,0.00051737326,0.00036360373,0.00024167857],"domain_scores_gemma":[0.99881566,0.00004320689,0.00033105814,0.00040153434,0.00017837348,0.00023015894],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00022297126,0.00027158103,0.0006592088,0.00009952786,0.00015525214,0.00000845134,0.00018443969,0.00029998453,0.0034259532],"category_scores_gemma":[0.000058576137,0.00027440256,0.00018118256,0.00007473809,0.00012064193,0.00023385872,0.00007391119,0.00017559245,0.000024148401],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008123125,0.00029798984,0.01625943,0.0035620122,0.0007745568,0.000028758881,0.02619733,0.0000089728765,0.907864,0.0015274929,0.0006790313,0.034677304],"study_design_scores_gemma":[0.0013734996,0.00073209114,0.9397967,0.0011658664,0.000401261,0.0000046235764,0.040318035,0.000024274768,0.015135774,0.00048126504,0.00014655135,0.00042007407],"about_ca_topic_score_codex":0.062043704,"about_ca_topic_score_gemma":0.17590024,"teacher_disagreement_score":0.92353725,"about_ca_system_score_codex":0.00045944157,"about_ca_system_score_gemma":0.00042891357,"threshold_uncertainty_score":0.9999708},"labels":[],"label_agreement":null},{"id":"W7006095035","doi":"","title":"2SLGBTQ+ community health needs: an advanced practicum report","year":2023,"lang":"en","type":"dissertation","venue":"Lu Zone Ul (Laurentian University)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Practicum; Public health; Health policy; Equity (law); Health equity; Health promotion; Community health; Health education; Social determinants of health; International health","score_opus":0.023292285752899808,"score_gpt":0.30180394789998455,"score_spread":0.2785116621470847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7006095035","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9625923,0.00033301208,0.00039064782,0.0006902598,0.0014659895,0.0010769448,0.00007641432,0.0006377131,0.03273669],"genre_scores_gemma":[0.60503155,0.0005376633,0.00049144105,0.00016478798,0.00014693053,0.0000022894935,0.0143916905,0.0001017327,0.37913188],"study_design_codex":"design_other","study_design_gemma":"qualitative","domain_scores_codex":[0.9972436,0.00043782135,0.0005296969,0.00060463016,0.0006163335,0.000567937],"domain_scores_gemma":[0.9965625,0.000119705306,0.00075168203,0.0015785313,0.0004516629,0.0005359282],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006392527,0.00043822164,0.00092159875,0.00088096893,0.0007053188,0.000043454358,0.00039271163,0.0004599539,0.00024540914],"category_scores_gemma":[0.0003135535,0.0005005001,0.000343818,0.0014056393,0.000110959605,0.0004286984,0.00007349463,0.0017797633,0.000108080305],"study_design_candidate":"qualitative","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.050175168,0.022411143,0.2260525,0.03913361,0.008519118,0.056905366,0.17334035,0.000104090475,0.018134132,0.01636844,0.14433207,0.24452403],"study_design_scores_gemma":[0.0036708738,0.0019495275,0.18213396,0.0022922857,0.0012515099,0.00016437638,0.61098254,0.000029828518,0.0005769374,0.00020694987,0.19546926,0.0012719829],"about_ca_topic_score_codex":0.0031076516,"about_ca_topic_score_gemma":0.15012379,"teacher_disagreement_score":0.43764216,"about_ca_system_score_codex":0.0005667003,"about_ca_system_score_gemma":0.0013172324,"threshold_uncertainty_score":0.99974465},"labels":[],"label_agreement":null},{"id":"W7007989375","doi":"","title":"Alberta Legal Services Mapping Project: Brief Overview","year":2007,"lang":"en","type":"article","venue":"eYLS (Yale Law School)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Legal research; Legal service; Economic Justice; General partnership; Legal action; Criminal justice; Action (physics); Legal profession","score_opus":0.02447901962550313,"score_gpt":0.297199089053238,"score_spread":0.27272006942773486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7007989375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80489165,0.003315691,0.00017948357,0.00084905606,0.00027026783,0.0006920451,0.000010034852,0.00014414244,0.1896476],"genre_scores_gemma":[0.96922266,0.00016564758,0.0010485068,0.005941523,0.0005153467,0.000009520373,0.000044104614,0.000037502425,0.0230152],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978162,0.00004810969,0.0004957117,0.00053190655,0.0004955706,0.0006124688],"domain_scores_gemma":[0.9985752,0.00013569793,0.00011213472,0.0007067051,0.00015329545,0.00031693402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007919292,0.00025401844,0.00045396728,0.00007682224,0.00019497646,0.00008058815,0.0002077381,0.00017618471,0.00071437977],"category_scores_gemma":[0.00012925382,0.00022033462,0.00020350316,0.0004036164,0.00011364572,0.000368821,0.00008628569,0.00042584227,0.0004997206],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002116386,0.0013446325,0.775786,0.007277914,0.00053795456,0.0011947007,0.0024430968,0.000002167305,0.036466278,0.13320762,0.020603064,0.019020183],"study_design_scores_gemma":[0.0012268169,0.00014812135,0.22857565,0.0006903637,0.00007356929,0.0000601879,0.00084708474,0.000029566765,0.0020957175,0.0002688254,0.76566184,0.00032225973],"about_ca_topic_score_codex":0.021682465,"about_ca_topic_score_gemma":0.047290824,"teacher_disagreement_score":0.7450588,"about_ca_system_score_codex":0.00013035524,"about_ca_system_score_gemma":0.00018258058,"threshold_uncertainty_score":0.9848322},"labels":[],"label_agreement":null},{"id":"W7011680411","doi":"","title":"\\nImproving the efficacy of antifungal therapy: preclinical studies.","year":2006,"lang":"en","type":"dissertation","venue":"Radboud Repository (Radboud University)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Valeant Pharmaceuticals International","keywords":"Antifungal; Drug; Immune system; Potency; Antibiotics","score_opus":0.033099322729907996,"score_gpt":0.3086567859343225,"score_spread":0.2755574632044145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7011680411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93722296,0.017901177,0.000023912118,0.000059896778,0.0026028706,0.0012285605,0.000021680624,0.00012728285,0.04081166],"genre_scores_gemma":[0.8180393,0.0023314212,0.000085002284,0.000025288304,0.00069463154,0.0000028515879,0.00020965676,0.00006832369,0.17854351],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9966833,0.00034917053,0.0008337512,0.0008702493,0.00080188306,0.00046165148],"domain_scores_gemma":[0.99631083,0.0008016827,0.00081803976,0.0011576746,0.0007527327,0.00015903944],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004333667,0.00052387256,0.0012145679,0.00031222883,0.0005841886,0.000053566295,0.0005213307,0.00065578154,0.000019234492],"category_scores_gemma":[0.00027806632,0.00039897728,0.0007387376,0.0006208674,0.0005848234,0.00013339939,0.00007534368,0.0010587104,0.000008029168],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.07899063,0.014958979,0.40989798,0.01273928,0.021876536,0.010074913,0.013814799,0.001108754,0.2587939,0.017639965,0.11084028,0.049263988],"study_design_scores_gemma":[0.009729827,0.0021783682,0.76041836,0.0025384857,0.0040278467,0.00010410631,0.01743113,0.00022334368,0.022335324,0.00004729613,0.17930917,0.0016567562],"about_ca_topic_score_codex":0.00033662812,"about_ca_topic_score_gemma":0.0000671625,"teacher_disagreement_score":0.35052034,"about_ca_system_score_codex":0.00034886197,"about_ca_system_score_gemma":0.00096065743,"threshold_uncertainty_score":0.9998462},"labels":[],"label_agreement":null},{"id":"W7014581773","doi":"","title":"The Prospective Antifungal Therapy Alliance® registry: A two-centre Canadian experience","year":2014,"lang":"en","type":"article","venue":"PubMed Central","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Antifungal; Antifungal drugs; MEDLINE; Prospective cohort study; Antibiotics","score_opus":0.014677045893154104,"score_gpt":0.25166571760968437,"score_spread":0.23698867171653026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7014581773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9787642,0.0006536378,0.000071838396,0.0035036837,0.00064293947,0.0009936921,0.000012824976,0.00006467514,0.015292559],"genre_scores_gemma":[0.99330175,0.00027517634,0.00007031058,0.0008606642,0.0005972548,0.00009887227,0.000011000053,0.000020816296,0.004764172],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9970704,0.00008108325,0.00022575996,0.0004326551,0.00035209232,0.0018380296],"domain_scores_gemma":[0.99813706,0.00007718506,0.000070397706,0.000616446,0.00010111333,0.0009978043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004923189,0.0001940139,0.00023715067,0.000026826016,0.0004003914,0.00009482412,0.00024064729,0.00007714924,0.00010855884],"category_scores_gemma":[0.000552878,0.00012798,0.00012353044,0.00020188665,0.00033971303,0.000103342456,0.000017738064,0.00028149795,0.000025404326],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034698725,0.0000611758,0.9707592,0.000009828111,0.000038732636,0.00002416338,0.0010601905,0.0000016268899,0.0002373147,0.002543626,0.0034732388,0.02144389],"study_design_scores_gemma":[0.0011143584,0.00004095837,0.8980124,0.00002098053,0.0000119445085,0.000010328688,0.0006023619,0.00011612269,0.0014895652,0.00018960676,0.09824695,0.0001444479],"about_ca_topic_score_codex":0.00805647,"about_ca_topic_score_gemma":0.082158536,"teacher_disagreement_score":0.09477371,"about_ca_system_score_codex":0.00055372616,"about_ca_system_score_gemma":0.0005155923,"threshold_uncertainty_score":0.998549},"labels":[],"label_agreement":null},{"id":"W7015268935","doi":"","title":"The secrets of Candida albicans: cell cycle genes and the underlying mechanisms of mating","year":2012,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Signal transduction; Gene; Cell division; Mitosis; Candida albicans; Cell cycle; Mutant; Model organism; Function (biology); Mating","score_opus":0.01930109875132354,"score_gpt":0.26483996164419454,"score_spread":0.245538862892871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7015268935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96103007,0.004212871,0.0000018540844,0.000025600288,0.00034606873,0.0008819452,0.00019321317,0.000033575736,0.033274777],"genre_scores_gemma":[0.99468166,0.0010562312,0.00036028473,0.00007048443,0.00002379036,0.00005012254,0.00011789914,0.00008281726,0.0035567365],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970132,0.00028217642,0.000960553,0.00046942104,0.0007802546,0.000494369],"domain_scores_gemma":[0.9968229,0.0009161511,0.0009073252,0.00077678857,0.00039552405,0.0001813423],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002034969,0.0004241626,0.0008951227,0.00009908256,0.000946612,0.00002783649,0.00033841468,0.00040777354,0.00010423661],"category_scores_gemma":[0.00068966957,0.000263304,0.00033517033,0.00025921245,0.00026740256,0.0001901069,0.00008617464,0.00083758426,0.000008067218],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026720732,0.00022150019,0.00088436104,0.0038161608,0.0005255444,0.000013208364,0.00018083391,0.000005305735,0.6848991,0.17708336,0.0000019993504,0.12969656],"study_design_scores_gemma":[0.0068494747,0.00057335576,0.044437893,0.0029888414,0.0026781082,0.000045190955,0.019800052,0.0001682995,0.8113664,0.107162714,0.0026922936,0.0012374228],"about_ca_topic_score_codex":0.0010177747,"about_ca_topic_score_gemma":0.0032426747,"teacher_disagreement_score":0.12845914,"about_ca_system_score_codex":0.00014747794,"about_ca_system_score_gemma":0.000094251496,"threshold_uncertainty_score":0.99998194},"labels":[],"label_agreement":null},{"id":"W7019487233","doi":"","title":"Genomic and Epidemiological Analyses of Candida auris: Unraveling Insights into a Critical Human Fungal Pathogen","year":2023,"lang":"en","type":"dissertation","venue":"MacSphere (McMaster University)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"University Grants Commission","keywords":"Candida auris; Human pathogen; Epidemiology; Fungal pathogen; Antifungal drugs; Transmission (telecommunications); Antifungal; Candida infections","score_opus":0.05023923544622001,"score_gpt":0.32802869791523775,"score_spread":0.27778946246901776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7019487233","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.953849,0.0012580499,0.00008649881,0.000042613556,0.00012397039,0.0002746307,0.00002600157,0.000069703055,0.044269495],"genre_scores_gemma":[0.8802708,0.00031327875,0.00037616634,0.000045735134,0.00009664371,0.0000011679867,0.0003223774,0.0000358997,0.11853795],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981384,0.00015618553,0.00045747054,0.0006699561,0.00026015975,0.00031778667],"domain_scores_gemma":[0.9987588,0.00030411346,0.00018596037,0.00030425412,0.00020708847,0.0002398015],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018827929,0.00034400632,0.0009803243,0.0002742135,0.00020744037,0.000017284221,0.00017713697,0.00050409755,0.0050230157],"category_scores_gemma":[0.000304397,0.00030821643,0.00028045542,0.00040868053,0.00024051897,0.000076440156,0.000097558426,0.00048444894,0.000021941305],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004892778,0.00051951717,0.44095555,0.007251694,0.0015465739,0.00374571,0.0072688037,0.000023973216,0.45796192,0.0058438415,0.0008223135,0.0691673],"study_design_scores_gemma":[0.0018987771,0.00088968826,0.9529628,0.0015537805,0.0022261387,0.000011786895,0.026773373,0.00020383424,0.0029684892,0.0017408892,0.007973871,0.0007965721],"about_ca_topic_score_codex":0.0009300797,"about_ca_topic_score_gemma":0.0040565864,"teacher_disagreement_score":0.51200724,"about_ca_system_score_codex":0.00017300852,"about_ca_system_score_gemma":0.00019768266,"threshold_uncertainty_score":0.999937},"labels":[],"label_agreement":null},{"id":"W7027262205","doi":"","title":"CANDIDA PARAPSILOSIS: CARATTERIZZAZIONE GENOTIPICA E FENOTIPICA DI UN PATOGENO OPPORTUNISTA EMERGENTE","year":2008,"lang":"it","type":"article","venue":"Electronic Theses and Dissertations Repository (University of Pisa)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Candida parapsilosis; Candida albicans; Thiobacillus ferrooxidans; Antifungal","score_opus":0.014984999765796456,"score_gpt":0.21688603750120783,"score_spread":0.20190103773541138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7027262205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877124,0.007637015,0.00053683383,0.00053706084,0.00016454047,0.00043368523,0.00006229277,0.00005292001,0.0028632553],"genre_scores_gemma":[0.98017526,0.005723679,0.00009017692,0.00004760485,0.00007019854,0.0000020365392,0.00009532425,0.00003068731,0.013765015],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9976792,0.000187364,0.00041675425,0.00065700046,0.00037695377,0.00068274717],"domain_scores_gemma":[0.99824107,0.00011413192,0.00033598466,0.00063697004,0.0002557874,0.0004160439],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.00014542464,0.000355868,0.00064721715,0.00012763853,0.0016810298,0.000024279372,0.00027177128,0.00021056258,0.0004658061],"category_scores_gemma":[0.000041355106,0.00039607182,0.0003123017,0.00036313676,0.0005981369,0.00024346123,0.00007294344,0.0003770103,0.00002033281],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0044946666,0.0022675053,0.7099406,0.0007734737,0.0026431796,0.0011176317,0.027048146,0.000038443042,0.23873632,0.008186192,0.0018073595,0.0029464741],"study_design_scores_gemma":[0.0021948337,0.0016055095,0.937204,0.00027485422,0.001462533,0.00021026854,0.040986035,0.00041888835,0.010407488,0.00016762299,0.004334245,0.0007337353],"about_ca_topic_score_codex":0.0029984806,"about_ca_topic_score_gemma":0.0010190415,"teacher_disagreement_score":0.22832884,"about_ca_system_score_codex":0.00019791485,"about_ca_system_score_gemma":0.0010408547,"threshold_uncertainty_score":0.99984914},"labels":[],"label_agreement":null},{"id":"W7039232451","doi":"","title":"The 8LI calibration source and through-going muon analysis in the Sudbury Neutrino Observatory","year":2001,"lang":"en","type":"dissertation","venue":"The Atrium (University of Guelph)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Muon; Neutrino; Zenith; Observatory; Calibration; Flux (metallurgy); Neutrino detector; Neutrino oscillation; Solar neutrino","score_opus":0.021002351674336072,"score_gpt":0.25272084669249123,"score_spread":0.23171849501815517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7039232451","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913649,0.0021145146,0.00029735581,0.0018827531,0.000067087356,0.00039285736,0.000007721712,0.00001978906,0.0038530193],"genre_scores_gemma":[0.98293215,0.0022029497,0.00003233272,0.00013525912,0.000063756175,5.225973e-7,0.0001878106,0.000011458292,0.014433735],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986109,0.00026112984,0.00021332435,0.00028819553,0.0004086622,0.00021775404],"domain_scores_gemma":[0.99850893,0.00044127688,0.00026355826,0.00062869384,0.00011875393,0.000038776747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077825243,0.00017789696,0.0004052379,0.00010751036,0.00054927194,0.000029368397,0.0003949459,0.00020687345,0.00003864244],"category_scores_gemma":[0.0000665005,0.00011324311,0.0002938591,0.0009134775,0.00023855806,0.00017339061,0.0000468817,0.0004801206,0.0000040006776],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00979259,0.0005938417,0.8265239,0.0016996327,0.0034078197,0.00034890228,0.094931126,0.0004111203,0.028305465,0.0043862583,0.009522109,0.020077255],"study_design_scores_gemma":[0.00042062282,0.000064401574,0.9148413,0.00006648643,0.0015489733,0.0000026260705,0.07813465,0.0007403067,0.00004217769,0.00017541899,0.0038488123,0.000114237606],"about_ca_topic_score_codex":0.0023190652,"about_ca_topic_score_gemma":0.015970958,"teacher_disagreement_score":0.0883174,"about_ca_system_score_codex":0.00006842082,"about_ca_system_score_gemma":0.0001265934,"threshold_uncertainty_score":0.89121693},"labels":[],"label_agreement":null},{"id":"W7066087921","doi":"","title":"Genetic analysis of differential susceptibility to infection with Candida albicans in mice","year":2004,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Candida albicans; Congenic; Genetic analysis; Gene; Population; Corpus albicans; Host (biology); Mutation","score_opus":0.010973133586723688,"score_gpt":0.26175800807214816,"score_spread":0.25078487448542447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7066087921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991666,0.00007704701,0.000003672062,0.0000106591915,0.00024513397,0.0012799336,0.0006633845,0.00007737993,0.0059767766],"genre_scores_gemma":[0.9961893,0.00011177729,0.0003677189,0.000082811275,0.000028584276,0.00009302721,0.0011347878,0.00009859231,0.0018934197],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9953393,0.000284073,0.0012563702,0.0014141874,0.001044495,0.0006616045],"domain_scores_gemma":[0.9972497,0.00013072764,0.0005051229,0.0009980592,0.0006670746,0.00044929545],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005485,0.00070033927,0.0018133298,0.0014146992,0.00025201737,0.000026798425,0.00025675193,0.0006931982,0.00069871],"category_scores_gemma":[0.0005614013,0.0006398405,0.0006435605,0.0030019784,0.00010411003,0.00018804907,0.000051900923,0.001177407,0.0000305632],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011876498,0.0030283586,0.5866309,0.003478562,0.0048229774,0.00024168663,0.00014613979,0.0013407157,0.3498157,0.002301336,0.0000019534891,0.036315203],"study_design_scores_gemma":[0.001597353,0.0007743892,0.9676049,0.0007603569,0.0039315703,0.000005321214,0.0002226252,0.000022216083,0.02390752,0.0003561812,0.0002104886,0.000607109],"about_ca_topic_score_codex":0.017576965,"about_ca_topic_score_gemma":0.46894208,"teacher_disagreement_score":0.4513651,"about_ca_system_score_codex":0.0017828455,"about_ca_system_score_gemma":0.000291273,"threshold_uncertainty_score":0.9996053},"labels":[],"label_agreement":null},{"id":"W7067690693","doi":"","title":"Morphogenetic signaling in Candida albicans.","year":2006,"lang":"en","type":"article","venue":"NPARC","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"","score_opus":0.00960328454541899,"score_gpt":0.24522825772792378,"score_spread":0.2356249731825048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7067690693","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95108575,0.0001756404,0.00009947683,0.00036543427,0.000028487388,0.00012272458,0.000003401606,0.000017160068,0.04810195],"genre_scores_gemma":[0.99595267,0.000010261252,0.0010448961,0.00020667525,0.000087662054,0.000006490167,0.000011393557,0.000008737043,0.0026712096],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992919,0.000017530883,0.00016835428,0.00016948505,0.00015948557,0.00019323574],"domain_scores_gemma":[0.9997077,0.000027848337,0.000019976622,0.00016750878,0.000027639664,0.00004935711],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000121533594,0.00006979102,0.00015584168,0.000047842703,0.000023341592,0.0000060310067,0.00003835768,0.00004541434,0.0011880613],"category_scores_gemma":[0.000030774612,0.000060899096,0.000045055538,0.0001406993,0.000045937937,0.00001864524,0.000009062415,0.00010065078,0.000040706014],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006684016,0.0000749761,0.5122097,0.00003056245,0.0000036970462,0.00008441148,0.000032962515,0.000017681203,0.48436835,0.00028497505,0.0012502568,0.0015755565],"study_design_scores_gemma":[0.0009995528,0.000085247986,0.95891917,0.000087030596,0.000022804612,0.000010272188,0.00008849627,0.00023343883,0.03240678,0.003827755,0.0032070787,0.000112395195],"about_ca_topic_score_codex":0.00043446952,"about_ca_topic_score_gemma":0.0008140097,"teacher_disagreement_score":0.45196158,"about_ca_system_score_codex":0.00006564124,"about_ca_system_score_gemma":0.00007526945,"threshold_uncertainty_score":0.999725},"labels":[],"label_agreement":null},{"id":"W7071522699","doi":"","title":"Specifications of the ACMG/AMP Variant Classification Guidelines for Germline DICER1 Variant Curation","year":2023,"lang":"en","type":"article","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Germline; Genome; Key (lock); Genomics; Mutation","score_opus":0.35612713581760375,"score_gpt":0.4188560276692924,"score_spread":0.06272889185168867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7071522699","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34484583,0.00018607837,0.46391064,0.16534613,0.0009883426,0.004452002,0.00027794053,0.00046727314,0.019525759],"genre_scores_gemma":[0.9750031,0.00014379676,0.007118628,0.00044640896,0.00028930718,0.000076820106,0.00022019433,0.000015672083,0.016686056],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99871653,0.000035145564,0.0005675381,0.00025443456,0.00027044042,0.00015592309],"domain_scores_gemma":[0.9979889,0.00018997797,0.00016432077,0.00069933763,0.0009049168,0.000052588544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065741077,0.000096920245,0.0001924216,0.000066751985,0.00014000149,0.0000127496205,0.0001339106,0.00008010131,0.0001840301],"category_scores_gemma":[0.0019205599,0.000058944996,0.00015211289,0.00053228484,0.00008018862,0.00009337085,0.000028635988,0.000075896736,0.00006540381],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004557891,0.00044226024,0.01754841,0.0003729636,0.00012401074,0.0000029551131,0.00043801143,0.000069890506,0.5329991,0.2536889,0.18340078,0.010456898],"study_design_scores_gemma":[0.0010893857,0.00009556252,0.8882309,0.00012017234,0.00018757989,0.000009346674,0.0010450826,0.02283303,0.0067509874,0.004951793,0.074519195,0.00016696086],"about_ca_topic_score_codex":0.000035789388,"about_ca_topic_score_gemma":0.00014399683,"teacher_disagreement_score":0.8706825,"about_ca_system_score_codex":0.00004684168,"about_ca_system_score_gemma":0.0001835716,"threshold_uncertainty_score":0.2403707},"labels":[],"label_agreement":null},{"id":"W7083300679","doi":"10.5281/zenodo.17197873","title":"Forecasting Gold Price Trends in Vietnam in the Fourth Quarter of 2025 Using the Arima Model","year":2025,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Autoregressive integrated moving average; Context (archaeology); Quarter (Canadian coin); Profitability index; Time series; Predictability; Box–Jenkins","score_opus":0.07415011446824188,"score_gpt":0.3067748377509396,"score_spread":0.23262472328269773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7083300679","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.73209083,0.00016951672,0.009900936,0.0035979475,0.00004186049,0.00064809277,0.00003563975,0.000082822684,0.25343233],"genre_scores_gemma":[0.99826014,0.000017810902,0.00027239977,0.00025248682,0.00002249568,4.2068116e-8,0.000060939354,0.00012584937,0.0009878272],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9987203,0.0002530882,0.00029668637,0.00022678758,0.00026553957,0.00023758523],"domain_scores_gemma":[0.99923795,0.00005160528,0.00007136973,0.00040880198,0.00019917467,0.000031087802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012275554,0.000088725465,0.00016079878,0.00025410476,0.0003460803,0.00009386481,0.0004376714,0.00004555073,0.00058866077],"category_scores_gemma":[0.0005015059,0.00005984151,0.00005530932,0.0011968475,0.0001284538,0.00009835767,0.00023892388,0.00032158798,0.000032526936],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040799533,0.0033900777,0.017832091,0.0020225788,0.00032022965,0.00019198991,0.050896093,0.01663855,0.043135796,0.04170033,0.28913996,0.53065234],"study_design_scores_gemma":[0.0040142285,0.0005937053,0.10036221,0.0008901705,0.00012574183,0.000085155465,0.013616084,0.75697786,0.0005537175,0.0016156881,0.12078066,0.0003847552],"about_ca_topic_score_codex":0.0000352767,"about_ca_topic_score_gemma":0.000010235546,"teacher_disagreement_score":0.74033934,"about_ca_system_score_codex":0.00012214306,"about_ca_system_score_gemma":0.000012326995,"threshold_uncertainty_score":0.6445423},"labels":[],"label_agreement":null},{"id":"W7083892690","doi":"","title":"Roy Clark, country guitar virtuoso, âHee Hawâ star, has died NO CAPTION","year":2018,"lang":"en","type":"other","venue":"Internet Archive (Internet Archive)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Guitar; Quarter (Canadian coin); Craft; Sight; Star (game theory)","score_opus":0.01930675884817786,"score_gpt":0.26089973374419656,"score_spread":0.2415929748960187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7083892690","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007382134,0.0007982361,0.008083186,0.00017766673,0.0020513514,0.0018547578,0.0016449327,0.0006450246,0.9773627],"genre_scores_gemma":[0.048480038,0.00048239742,0.0033114671,0.00096755143,0.0029457852,0.00010133468,0.0030636897,0.00092503475,0.9397227],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9937836,0.00042537288,0.0012600459,0.0020628248,0.001166525,0.001301633],"domain_scores_gemma":[0.9961466,0.0003394053,0.00072308566,0.001856076,0.00020470528,0.00073012605],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["metaepi_narrow","insufficient_payload"],"category_scores_codex":[0.0004560179,0.0013731135,0.0018053792,0.00077754643,0.00008649929,0.00020039285,0.0011508269,0.00060974254,0.052725457],"category_scores_gemma":[0.0004354921,0.0012109391,0.0008761926,0.00017283876,0.0020101548,0.00013582564,0.0007755317,0.001584509,0.02459011],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033438646,0.00049727876,0.006980303,0.00083590584,0.0011259179,0.0004812193,0.0012410517,3.8999903e-7,0.0016799079,0.0011969323,0.982221,0.00039619248],"study_design_scores_gemma":[0.0021986407,0.0017641055,0.007938959,0.0040695705,0.00045143755,0.0000921422,0.000121878045,0.0014156838,0.0003421569,0.00074557035,0.97974974,0.0011101335],"about_ca_topic_score_codex":0.019403188,"about_ca_topic_score_gemma":0.069137186,"teacher_disagreement_score":0.049734,"about_ca_system_score_codex":0.00029623514,"about_ca_system_score_gemma":0.00044230948,"threshold_uncertainty_score":0.99990195},"labels":[],"label_agreement":null},{"id":"W7084626804","doi":"","title":"PERSCOL - Persévérance dans l’enseignement secondaire à distance en France. Etude sur la persévérance des élèves du CNED.: Rapport intermédiaire (décembre 2024)","year":2024,"lang":"fr","type":"report","venue":"HAL (Le Centre pour la Communication Scientifique Directe)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski; Université Laval","funders":"","keywords":"Measure (data warehouse); Context (archaeology); Field (mathematics)","score_opus":0.013287815892322119,"score_gpt":0.24124554569220177,"score_spread":0.22795772979987966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7084626804","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39202005,0.14651062,0.027222445,0.008121975,0.0029367083,0.0025219594,0.0009463878,0.0006210839,0.4190988],"genre_scores_gemma":[0.66178733,0.025680846,0.0020627195,0.00017684235,0.000251485,0.00023534571,0.00048537692,0.00020453437,0.3091155],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98625827,0.0055663153,0.0020072104,0.0027484247,0.0018614093,0.0015583594],"domain_scores_gemma":[0.98718065,0.0028115718,0.0010132662,0.0037539378,0.004385809,0.00085476204],"candidate_categories":["metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.011382642,0.001454917,0.0018911842,0.00033435234,0.001115959,0.0006657506,0.0018309382,0.0010802492,0.0023559495],"category_scores_gemma":[0.004672122,0.0014761968,0.001352875,0.0012002126,0.003022983,0.00064103,0.00086239015,0.002615687,0.0003364973],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075883965,0.0059493114,0.19164942,0.03096963,0.0029250323,0.0036533608,0.2645832,0.00007401634,0.020189652,0.028294656,0.097981066,0.35297182],"study_design_scores_gemma":[0.0028063834,0.000022755987,0.21376695,0.05545781,0.0015152125,0.0007143917,0.021487614,0.008047309,0.009384305,0.00057220383,0.6833259,0.002899208],"about_ca_topic_score_codex":0.0021467612,"about_ca_topic_score_gemma":0.008504139,"teacher_disagreement_score":0.5853448,"about_ca_system_score_codex":0.0018121144,"about_ca_system_score_gemma":0.005590185,"threshold_uncertainty_score":0.99982005},"labels":[],"label_agreement":null},{"id":"W7093298993","doi":"10.63209/2025.1546","title":"Évaluation de l’usage du voriconazole au Centre intégré universitaire de santé et de services sociaux de l’Estrie–Centre hospitalier universitaire de Sherbrooke","year":2025,"lang":"","type":"article","venue":"Pharmactuel","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke","funders":"Université de Montréal","keywords":"Context (archaeology); Hospital ward; Ile de france","score_opus":0.012987943546956005,"score_gpt":0.30504370524901997,"score_spread":0.292055761702064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7093298993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9600397,0.002139486,0.009156883,0.0085422825,0.00043490116,0.00085377635,0.00015870099,0.00019703682,0.018477233],"genre_scores_gemma":[0.98404145,0.00470162,0.0010161143,0.003506046,0.0004425879,0.0000053372573,0.00013212237,0.00006821216,0.006086537],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9943193,0.0013180919,0.0006199821,0.00096565177,0.00068380445,0.0020931778],"domain_scores_gemma":[0.99695,0.00065850833,0.00033940212,0.0006124529,0.00047445268,0.0009651954],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0025833407,0.0007417798,0.00078346167,0.00027863288,0.00093460514,0.00014889476,0.000769073,0.00057570037,0.0014170576],"category_scores_gemma":[0.00037941785,0.0008677634,0.0005274654,0.000846351,0.0003535445,0.00080412306,0.0003520276,0.0011409268,0.00009215304],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.0016403501,0.0010123922,0.9164839,0.0021073462,0.0009417405,0.0007629786,0.027458725,0.00054009724,0.012609124,0.0015433785,0.011003236,0.023896737],"study_design_scores_gemma":[0.008392874,0.0002048898,0.8444245,0.0018965813,0.0037640312,0.0000292236,0.07845813,0.030094875,0.017621955,0.0035693347,0.010508876,0.0010347299],"about_ca_topic_score_codex":0.0022213089,"about_ca_topic_score_gemma":0.0019119744,"teacher_disagreement_score":0.07205939,"about_ca_system_score_codex":0.01229165,"about_ca_system_score_gemma":0.011086299,"threshold_uncertainty_score":0.9994958},"labels":[],"label_agreement":null},{"id":"W7097630301","doi":"","title":"clinical isolates of the opportunist fungal pathogen","year":2015,"lang":"en","type":"article","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Virulence; Locus (genetics); Microsatellite; Genotype; Allele; Gene; Phylogenetic tree; Aspergillus fumigatus","score_opus":0.12297144392331123,"score_gpt":0.37262358530737383,"score_spread":0.2496521413840626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7097630301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9264927,0.0001514676,0.00012616006,0.0011597611,0.00019301439,0.00015603512,0.0000075845455,0.000021627333,0.07169163],"genre_scores_gemma":[0.98683846,0.000021722832,0.00041990596,0.0006512299,0.00008973771,0.0000010783,0.0000028181646,0.000005708118,0.011969339],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99917585,0.00006293527,0.0003261504,0.00013974255,0.00018437128,0.00011097845],"domain_scores_gemma":[0.999124,0.00006131773,0.00006423843,0.00042440687,0.00016033002,0.000165718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072963635,0.00006103022,0.00021464031,0.000009537008,0.000023803135,0.000003490488,0.00009463909,0.00007108376,0.00017960531],"category_scores_gemma":[0.00039481057,0.000031575924,0.00015984962,0.00007951592,0.00019235749,0.00002712272,0.000053842938,0.00012990147,0.000036039055],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016893349,0.00013879442,0.98545974,0.000017173996,0.000023173596,0.0000067581527,0.000046789988,8.2457426e-8,0.0017168366,0.0008059911,0.009076378,0.0025393565],"study_design_scores_gemma":[0.0008851296,0.00034772846,0.97963774,0.000035601606,0.000083903506,0.000013962897,0.00063540606,0.00010734085,0.0011035347,0.00048599878,0.016595332,0.00006833672],"about_ca_topic_score_codex":0.000024397465,"about_ca_topic_score_gemma":0.00004343886,"teacher_disagreement_score":0.06034574,"about_ca_system_score_codex":0.000015147835,"about_ca_system_score_gemma":0.0003021167,"threshold_uncertainty_score":0.19665523},"labels":[],"label_agreement":null},{"id":"W7098649129","doi":"","title":"Tax Effects in Canadian Equity Option Markets","year":2016,"lang":"en","type":"article","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Equity (law); Investment (military); Tax avoidance; Double taxation; Dividend tax; Income tax; State income tax","score_opus":0.014543953781872359,"score_gpt":0.30194456546448906,"score_spread":0.2874006116826167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7098649129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92411965,0.000050751292,0.00061787793,0.0021368738,0.000073051815,0.00022932114,0.0000032190023,0.000020145573,0.07274912],"genre_scores_gemma":[0.98619676,0.000020078189,0.00018167809,0.00047435195,0.000034460067,0.0000063725406,0.0000018496027,0.0000049669784,0.01307951],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99930483,0.000030577765,0.00010112481,0.00015766225,0.00011449389,0.00029132163],"domain_scores_gemma":[0.999441,0.00007396052,0.000011247875,0.00018638159,0.000029215134,0.00025814277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035661808,0.000060085426,0.00012121229,0.000072715164,0.00002156768,0.000004517413,0.000037543163,0.000064507956,0.0006612005],"category_scores_gemma":[0.00038024862,0.000035272908,0.000033586297,0.00008392796,0.000033914053,0.000060482627,0.00001551386,0.000051481093,0.00019877248],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014745661,0.000035014258,0.92884785,0.000072823874,0.000005729758,0.00008844539,0.0000177508,2.6255178e-8,0.012286233,0.0029270146,0.002992247,0.0525794],"study_design_scores_gemma":[0.00065455434,0.00005423614,0.9931595,0.0001268042,0.0000054374773,0.0000024055307,0.0000098922765,0.000015555279,0.0018637055,0.00087792816,0.0031758414,0.00005414274],"about_ca_topic_score_codex":0.08253647,"about_ca_topic_score_gemma":0.71272635,"teacher_disagreement_score":0.6301899,"about_ca_system_score_codex":0.0003727914,"about_ca_system_score_gemma":0.00025326587,"threshold_uncertainty_score":0.923573},"labels":[],"label_agreement":null},{"id":"W7099240354","doi":"","title":"RESEARCH ARTICLE a","year":2016,"lang":"en","type":"article","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Candida albicans; Adhesion; Yeast; Regulator; Gene; Cell adhesion; Corpus albicans; Cell","score_opus":0.09352119578240306,"score_gpt":0.4219613698499957,"score_spread":0.3284401740675926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7099240354","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86965775,0.000032210508,0.00061798486,0.005499857,0.000012475012,0.00007436301,3.7173479e-7,0.000034076897,0.124070875],"genre_scores_gemma":[0.9365783,0.000015329673,0.00027340456,0.00017802943,0.000045581717,0.000003198136,9.494926e-8,0.0000032970322,0.062902786],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993962,0.00002623693,0.000066304514,0.00011522119,0.00021746322,0.00017855882],"domain_scores_gemma":[0.9994629,0.000107259075,0.0000035652058,0.00021808373,0.00012028284,0.00008792022],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00045643272,0.000024797584,0.00005810653,0.000029272174,0.000035762496,0.000003883357,0.000027419477,0.000024603009,0.0027159087],"category_scores_gemma":[0.00025418852,0.00001147544,0.000026565598,0.00011624959,0.000102504746,0.000037588994,0.000017480856,0.000052626398,0.0018137696],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002600015,0.00011988837,0.47886863,0.000014323365,0.000009145371,0.000027758924,0.000046092395,3.7025663e-9,0.43844154,0.013831996,0.025783312,0.042597298],"study_design_scores_gemma":[0.0007553938,0.00019040676,0.88713187,0.00005014827,0.000004120227,0.0000058356945,0.0002756143,0.0000060572015,0.08988565,0.0028573268,0.01879562,0.00004196132],"about_ca_topic_score_codex":0.000014017242,"about_ca_topic_score_gemma":0.00002856234,"teacher_disagreement_score":0.4082632,"about_ca_system_score_codex":0.000035005185,"about_ca_system_score_gemma":0.0000486749,"threshold_uncertainty_score":0.9989634},"labels":[],"label_agreement":null},{"id":"W7100098767","doi":"","title":"Wild-Type MIC Distributions and Epidemiological Cutoff Values","year":2011,"lang":"en","type":"article","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cutoff; Aspergillus terreus; Population; Epidemiology; Amphotericin B; Aspergillus niger","score_opus":0.08560164510137452,"score_gpt":0.32410552355065364,"score_spread":0.23850387844927912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7100098767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9771021,0.0004232716,0.0016839851,0.00046114673,0.000047800924,0.00011624896,0.00000567071,0.000069613576,0.020090155],"genre_scores_gemma":[0.99408,0.00019160127,0.002532641,0.00043981345,0.00003661216,0.0000020756847,0.000017862685,0.000003397785,0.0026960038],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99938744,0.000029822926,0.00015775891,0.0001964883,0.000065045184,0.00016345632],"domain_scores_gemma":[0.9995176,0.00008842643,0.000020709085,0.00018821096,0.000061152256,0.00012388418],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024979835,0.00007783358,0.0002098483,0.000014399748,0.00006604118,0.0000030413914,0.000033609784,0.0000771178,0.0009231179],"category_scores_gemma":[0.0006485786,0.000048188704,0.00005221882,0.00007453569,0.00019892813,0.000037789378,0.000027287038,0.00010876205,0.00008074647],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016363566,0.00011718113,0.9797622,0.000018389024,0.000021426058,0.000013956523,0.00006782201,9.627702e-9,0.0021933028,0.010463714,0.0060716392,0.0011067004],"study_design_scores_gemma":[0.00018948154,0.0002424004,0.99055475,0.000015223785,0.00004204787,0.000015243677,0.00012367788,0.000034964763,0.0010506643,0.0062533827,0.0014159605,0.00006222087],"about_ca_topic_score_codex":0.00007142427,"about_ca_topic_score_gemma":0.000016876835,"teacher_disagreement_score":0.017394152,"about_ca_system_score_codex":0.000017826975,"about_ca_system_score_gemma":0.00002865892,"threshold_uncertainty_score":0.99999017},"labels":[],"label_agreement":null},{"id":"W7104037084","doi":"10.17169/refubium-49865","title":"Expansion of the functional genomics GRACE library reveals genes relevant for temperature-dependent fitness in Candida albicans","year":2025,"lang":"en","type":"article","venue":"Refubium (Universitätsbibliothek der Freien Universität Berlin)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; University of Toronto; Government of Ontario; Canadian Institute for Advanced Research; Innovation, Science and Economic Development Canada; Canadian Institutes of Health Research; Alliance de recherche numérique du Canada; Genome Canada","keywords":"Candida albicans; Functional genomics; Gene; Virulence; Adaptation (eye); Phenotype; Genomics; Corpus albicans","score_opus":0.011769086955639097,"score_gpt":0.23486537768736265,"score_spread":0.22309629073172355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7104037084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868137,0.001285149,0.0021376547,0.0035647622,0.0004181154,0.0010988032,0.00020631745,0.000063365034,0.0044120885],"genre_scores_gemma":[0.95636487,0.0007302266,0.0011187237,0.00046093564,0.000057587058,0.0000042337238,0.000094260715,0.000032396434,0.041136768],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99805856,0.00012963093,0.0003645513,0.00062779384,0.00039222857,0.00042722296],"domain_scores_gemma":[0.9983552,0.00026438423,0.00020255767,0.0007818928,0.0002548549,0.00014107433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026966797,0.00028611088,0.00055322074,0.0016726505,0.00034584344,0.00003611505,0.00049502274,0.0003000462,0.00028175555],"category_scores_gemma":[0.000059321206,0.00024509165,0.00034494925,0.0033225536,0.00027833524,0.0013367073,0.0002887243,0.00038368243,0.0000052162027],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011710665,0.0011311207,0.42010054,0.0021051478,0.0013398821,0.00031153776,0.0024861393,0.0014710961,0.43598673,0.09352216,0.02650179,0.003333192],"study_design_scores_gemma":[0.020218674,0.0007631756,0.79170793,0.0023515432,0.0021756482,0.000074167336,0.02612325,0.0020308,0.0697149,0.0069351876,0.0764248,0.0014799198],"about_ca_topic_score_codex":0.00016953313,"about_ca_topic_score_gemma":0.00043087732,"teacher_disagreement_score":0.3716074,"about_ca_system_score_codex":0.00046226676,"about_ca_system_score_gemma":0.0011426464,"threshold_uncertainty_score":0.99945474},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W7111595881","doi":"","title":"Aspergillus and Aspergillosis","year":2015,"lang":"en","type":"book-chapter","venue":"Research Explorer (The University of Manchester)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"","score_opus":0.20078534460677772,"score_gpt":0.3288558430226324,"score_spread":0.12807049841585466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7111595881","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2249327,0.013047117,0.00008855309,0.008125703,0.00018273538,0.0023795709,0.00010644876,0.00013788328,0.7509993],"genre_scores_gemma":[0.696066,0.007898699,0.0002613683,0.00007349741,0.00020619227,8.8667184e-7,0.00004753405,0.00007176063,0.29537404],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99764043,0.00009685953,0.00019648018,0.0005054864,0.0011955955,0.00036514696],"domain_scores_gemma":[0.9976943,0.00024382203,0.00009799419,0.000859415,0.0007809292,0.00032349935],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001203245,0.00023860455,0.0005734085,0.0002474968,0.00025159176,0.000014501542,0.0003495,0.00032760078,0.0009686394],"category_scores_gemma":[0.00013054191,0.00019346838,0.0002105801,0.00007900221,0.0016890583,0.000110591594,0.00047563843,0.0009508395,0.00034205822],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015436911,0.0010377783,0.033768296,0.008331201,0.0046932492,0.004946402,0.12658778,0.000008341147,0.0033576689,0.1892525,0.48878717,0.12379271],"study_design_scores_gemma":[0.0017846473,0.00097028364,0.019678175,0.0012600354,0.00037652985,0.000042968997,0.013506312,0.000035772537,0.00010141005,0.009346961,0.9524743,0.0004226348],"about_ca_topic_score_codex":0.000014180447,"about_ca_topic_score_gemma":0.00001407307,"teacher_disagreement_score":0.47113335,"about_ca_system_score_codex":0.0003108744,"about_ca_system_score_gemma":0.00033304383,"threshold_uncertainty_score":0.9999446},"labels":[],"label_agreement":null},{"id":"W7112005103","doi":"","title":"Performance of two Aspergillus IgG antibody EIA assays compared to the precipitin test in chronic and allergic aspergillosis","year":2012,"lang":"en","type":"article","venue":"Research Explorer (The University of Manchester)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Precipitin; Aspergillosis; Antibody; Aspergillus fumigatus; Aspergillus; Immune system; Allergy; Immunoglobulin E","score_opus":0.0731703834218359,"score_gpt":0.33854316258382855,"score_spread":0.26537277916199264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7112005103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961979,0.0007178043,0.000025048006,0.0015301857,0.000029317345,0.0006521529,0.000009386235,0.000011952077,0.00082627335],"genre_scores_gemma":[0.998446,0.0011192061,0.00014235379,0.00003239931,0.00007901824,0.0000024279543,0.000008992851,0.000012884707,0.00015675127],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979588,0.00028227153,0.00023043665,0.00027596168,0.00069620076,0.0005563792],"domain_scores_gemma":[0.9982644,0.000577268,0.000072774215,0.0006453295,0.00024423303,0.00019605151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020856129,0.0001429229,0.00036585858,0.00019284904,0.00023609321,0.00000898899,0.00041397932,0.00006720456,0.000164727],"category_scores_gemma":[0.00021691441,0.00009995894,0.000088373876,0.0005376067,0.00069534365,0.00023425661,0.0003749461,0.0004419403,0.000066340246],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000666337,0.0003170953,0.9478951,0.0003607502,0.00006143624,0.0000102612175,0.022112558,0.00006792971,0.025915785,0.00009928817,0.00067233184,0.0018211436],"study_design_scores_gemma":[0.0012421513,0.00048385406,0.978582,0.0003797361,0.000034207187,0.000005694179,0.011494897,0.0014123173,0.0032001114,0.000009992199,0.003048975,0.00010601121],"about_ca_topic_score_codex":0.000096789816,"about_ca_topic_score_gemma":0.00013279286,"teacher_disagreement_score":0.030686967,"about_ca_system_score_codex":0.00030924834,"about_ca_system_score_gemma":0.00016390097,"threshold_uncertainty_score":0.40762073},"labels":[],"label_agreement":null},{"id":"W7112042610","doi":"","title":"Differential proinflammatory responses to Aspergillus fumigatus by airway epithelial cells in vitro are protease dependant","year":2021,"lang":"en","type":"article","venue":"Research Explorer (The University of Manchester)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Proteases; Aspergillus fumigatus; Proinflammatory cytokine; Protease; Cysteine protease; Interleukin 8; Cytokine; Immune system","score_opus":0.041662325202678305,"score_gpt":0.28548311625057493,"score_spread":0.2438207910478966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7112042610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995606,0.00015173762,0.00017060214,0.00280437,0.00005184224,0.0010133368,0.00008491175,0.00002622435,0.000090954236],"genre_scores_gemma":[0.9981282,0.00015488772,0.00022291354,0.00006129783,0.00006288778,0.0000067031538,0.000020114509,0.000020821137,0.0013222225],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968904,0.000750711,0.0002446577,0.00054563547,0.000976544,0.0005920195],"domain_scores_gemma":[0.9981027,0.0002980408,0.00006984242,0.000759801,0.00042841953,0.00034117865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083057804,0.00017733294,0.00042260808,0.00021334802,0.00024042976,0.000023100645,0.00035636008,0.0001233833,0.0003440357],"category_scores_gemma":[0.00045299504,0.00015195,0.00017431524,0.00045509904,0.00042444016,0.00013807333,0.00040962457,0.00066778704,0.00017434558],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010561887,0.00055191276,0.013068682,0.00037950862,0.000055764376,0.0013544124,0.009999951,0.0000022950762,0.9594369,0.00001744476,0.0024704274,0.002100799],"study_design_scores_gemma":[0.002023838,0.00028238096,0.15991125,0.00034258913,0.000034885263,0.0000103344455,0.027806923,0.000052889354,0.79959506,0.000045632056,0.0096958205,0.00019839844],"about_ca_topic_score_codex":0.000033885335,"about_ca_topic_score_gemma":0.000048412207,"teacher_disagreement_score":0.15984185,"about_ca_system_score_codex":0.00033440313,"about_ca_system_score_gemma":0.00053702976,"threshold_uncertainty_score":0.6196341},"labels":[],"label_agreement":null},{"id":"W7112052621","doi":"","title":"Molecular epidemiology of Aspergillus fumigatus in chronic pulmonary aspergillosis patients","year":2021,"lang":"en","type":"article","venue":"Research Explorer (The University of Manchester)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Aspergillus fumigatus; Genotyping; Aspergillosis; Aspergillus; Pulmonary aspergillosis; Molecular epidemiology","score_opus":0.08422276698712614,"score_gpt":0.331172202105669,"score_spread":0.24694943511854286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7112052621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99578154,0.0018170598,0.00007680581,0.0012151964,0.000027175642,0.00028917068,0.000008009018,0.000008575953,0.0007764762],"genre_scores_gemma":[0.99835455,0.0012130582,0.00022600491,0.00005202198,0.00001940686,0.0000010938428,0.000029929208,0.0000115990415,0.00009231076],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99754494,0.0008002676,0.00029747968,0.00038984205,0.0005105149,0.00045693936],"domain_scores_gemma":[0.9979575,0.00056194526,0.000086747415,0.0006965939,0.00056407566,0.00013311578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012269004,0.000116942996,0.00049352174,0.00017916583,0.00009170599,0.0000014941147,0.0002865919,0.00013883348,0.00024450393],"category_scores_gemma":[0.0008057918,0.000102596394,0.00020799092,0.00057017617,0.00077464076,0.00009715737,0.00032816117,0.0004905191,0.000037167163],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068539614,0.0005385311,0.9726097,0.0005506262,0.000101934675,0.00046735106,0.0031999084,0.000056807363,0.015959246,0.00063266896,0.0001981684,0.0049996367],"study_design_scores_gemma":[0.0010230124,0.0003286748,0.9821171,0.00032204087,0.000032811866,0.000004529176,0.00662519,0.00021445868,0.007441917,0.00044505348,0.001356294,0.000088906265],"about_ca_topic_score_codex":0.000055708908,"about_ca_topic_score_gemma":0.000033142238,"teacher_disagreement_score":0.009507387,"about_ca_system_score_codex":0.00045747464,"about_ca_system_score_gemma":0.00047458694,"threshold_uncertainty_score":0.41837594},"labels":[],"label_agreement":null},{"id":"W7113083723","doi":"","title":"Comparison of two genotyping methods reveals clusters of resistant Aspergillus fumigatus from chronic pulmonary aspergillosis patients in the UK","year":2018,"lang":"en","type":"article","venue":"Research Explorer (The University of Manchester)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Genotyping; Aspergillus fumigatus; Aspergillosis; Genotype; Aspergillus; Polymerase chain reaction","score_opus":0.12091337462111895,"score_gpt":0.41387722248889136,"score_spread":0.2929638478677724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7113083723","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968767,0.00080355426,0.000394526,0.00045336847,0.000047673653,0.00066395756,0.000024472687,0.000007920073,0.00072783354],"genre_scores_gemma":[0.9975392,0.00029338335,0.0019975617,0.000031524385,0.00006507865,0.0000015561369,0.000023972772,0.000014297142,0.000033431334],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99617195,0.001460674,0.0004979136,0.00039799904,0.0010281843,0.00044328382],"domain_scores_gemma":[0.9968351,0.0011344282,0.0002507498,0.0010215469,0.0006577731,0.00010036307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029227575,0.000162979,0.00063347095,0.00024092925,0.00023371752,0.000007354984,0.000753683,0.00011634689,0.0002011711],"category_scores_gemma":[0.0003694592,0.00011697557,0.0002073686,0.00068307016,0.0016241188,0.0001229727,0.00035895084,0.00052267755,0.000016149219],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034191224,0.00075928326,0.85440534,0.00053981505,0.00020365365,0.000022135127,0.059646837,0.000014208362,0.07053314,0.0001915609,0.0006809649,0.009583914],"study_design_scores_gemma":[0.001434984,0.0009365273,0.9442016,0.0006968741,0.00009898027,5.975711e-7,0.039191533,0.0005470188,0.011771713,0.00043889164,0.00056581234,0.000115507704],"about_ca_topic_score_codex":0.0005820585,"about_ca_topic_score_gemma":0.00030121263,"teacher_disagreement_score":0.0897962,"about_ca_system_score_codex":0.00036558034,"about_ca_system_score_gemma":0.00019608003,"threshold_uncertainty_score":0.5984133},"labels":[],"label_agreement":null},{"id":"W7113533519","doi":"","title":"Mucormicosis rino-órbito-cerebral asociada con COVID-19 y factores relacionados a la mortalidad. Revisión sistemática","year":2025,"lang":"es","type":"article","venue":"Dialnet (Universidad de la Rioja)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Confidence interval; Odds ratio; Diabetes mellitus; Complication; Mortality rate; Relative risk; Logistic regression; Meta-analysis","score_opus":0.013836158385761401,"score_gpt":0.30860261414010864,"score_spread":0.29476645575434723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7113533519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8801405,0.0052410816,0.0009228714,0.0061065895,0.00052473,0.0010936446,0.0003768061,0.00030448558,0.10528933],"genre_scores_gemma":[0.9807866,0.0033203857,0.00022572932,0.0029516947,0.00026698565,0.000019678204,0.00017935107,0.00006119152,0.012188341],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9947086,0.0014130058,0.00070308754,0.001196077,0.0009022233,0.0010770009],"domain_scores_gemma":[0.9943142,0.002840615,0.0003996192,0.0011829721,0.00028380298,0.0009787785],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014770866,0.00071705674,0.0012933437,0.00059113186,0.0007204028,0.000353991,0.00067513797,0.0012532903,0.0016682753],"category_scores_gemma":[0.0027477504,0.0007718666,0.0007814139,0.0011893092,0.0012690186,0.0004069782,0.00032835442,0.0013714839,0.0002221349],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001086122,0.0007018466,0.81365556,0.002684312,0.00078536704,0.001384916,0.0019074546,0.000016781933,0.0014791789,0.13904795,0.034252618,0.0029978787],"study_design_scores_gemma":[0.0051416303,0.0002798514,0.6826497,0.0019018903,0.0015486253,0.000038237453,0.0060562133,0.00031743103,0.00030729474,0.0016862543,0.29923812,0.0008347928],"about_ca_topic_score_codex":0.0022699663,"about_ca_topic_score_gemma":0.0005151373,"teacher_disagreement_score":0.26498547,"about_ca_system_score_codex":0.0018840699,"about_ca_system_score_gemma":0.003435272,"threshold_uncertainty_score":0.9994732},"labels":[],"label_agreement":null},{"id":"W7114913827","doi":"10.63483/rp.v33i4.291","title":"MUCORMICOSE NO TRANSPLANTE PULMONAR","year":2025,"lang":"","type":"article","venue":"Revista Pulmão","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Computed tomography; Helical scan; Transplantation","score_opus":0.008281312698331636,"score_gpt":0.2858622729443708,"score_spread":0.2775809602460391,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7114913827","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4640506,0.17091547,0.0059470874,0.0045086015,0.003801688,0.004287297,0.0006832761,0.00038681744,0.34541917],"genre_scores_gemma":[0.86929643,0.016232485,0.00016226129,0.0013761607,0.0004571461,0.000026353315,0.000109910514,0.00004954448,0.11228972],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9953876,0.00026779794,0.0013751293,0.0012230235,0.0006348808,0.0011115695],"domain_scores_gemma":[0.99695975,0.00028745542,0.00022312228,0.0016189337,0.00047519951,0.00043552325],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0010108609,0.0006754894,0.0013958483,0.00028498197,0.00036530464,0.00018335039,0.000524651,0.0004659034,0.0029839713],"category_scores_gemma":[0.000596979,0.00062934286,0.0007215881,0.00111876,0.0004646708,0.00023000043,0.00009940906,0.0009124249,0.0028953734],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011860462,0.0044179736,0.40174332,0.04616609,0.0020799907,0.004213435,0.00082257396,0.0000032266964,0.10049833,0.07858809,0.08475904,0.26484746],"study_design_scores_gemma":[0.0028092607,0.00054877525,0.10814521,0.010506487,0.0017121071,0.000048806178,0.0003049232,0.000860413,0.0019288353,0.0003535794,0.87186325,0.0009183871],"about_ca_topic_score_codex":0.000085562155,"about_ca_topic_score_gemma":0.000026838248,"teacher_disagreement_score":0.7871042,"about_ca_system_score_codex":0.00040694748,"about_ca_system_score_gemma":0.0009594368,"threshold_uncertainty_score":0.9996158},"labels":[],"label_agreement":null},{"id":"W7115378380","doi":"","title":"Global Analysis of the Evolution and Mechanism of Echinocandin Resistance in Candida glabrata","year":2012,"lang":"en","type":"article","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Toronto","funders":"","keywords":"Echinocandin; Candida glabrata; Drug resistance; Mutation; Caspofungin; Mutant; Echinocandins; Antifungal drug","score_opus":0.01079783394485475,"score_gpt":0.2706901645471831,"score_spread":0.25989233060232836,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7115378380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880133,0.0010286045,0.0015791889,0.00010167056,0.00003202978,0.00013042586,0.00003149588,0.000004510061,0.009078754],"genre_scores_gemma":[0.99907696,0.000021614134,0.0003151466,0.000037941358,0.000008496263,0.0000012156194,0.0000031981388,0.0000019519791,0.0005334552],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992852,0.000045682442,0.00023005034,0.0001120139,0.00019277244,0.00013427854],"domain_scores_gemma":[0.99950594,0.000028278942,0.0000783295,0.00029158534,0.000046569512,0.00004927656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034822957,0.00006117614,0.00027278817,0.000052286367,0.000020727994,0.0000015707042,0.00005376857,0.000051081064,0.00005923491],"category_scores_gemma":[0.000091574795,0.000037949023,0.000079339225,0.0009222918,0.0000855409,0.000057640696,0.000032113483,0.00004606816,2.8128449e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012708124,0.00007444142,0.9149375,0.000046482448,0.00009538044,2.650064e-7,0.0001158749,6.9972737e-7,0.0016430009,0.08287335,0.000046957794,0.000038937807],"study_design_scores_gemma":[0.00029069197,0.000018549335,0.9960775,0.000037071735,0.000404875,4.0656997e-7,0.00038103038,0.00013412292,0.0011069052,0.0015035198,0.000010624453,0.000034698773],"about_ca_topic_score_codex":0.0020667913,"about_ca_topic_score_gemma":0.043749742,"teacher_disagreement_score":0.08136983,"about_ca_system_score_codex":0.00012631615,"about_ca_system_score_gemma":0.0000748773,"threshold_uncertainty_score":0.97369933},"labels":[],"label_agreement":null},{"id":"W7116840615","doi":"10.1128/jcm.01550-25","title":"Reaffirming the importance of nomenclature stability for <i>Candida auris</i> and its associated disease of candidiasis","year":2025,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; Institut National de Santé Publique du Québec","funders":"","keywords":"Nomenclature; Disease; Mycosis; MEDLINE","score_opus":0.045139834035469874,"score_gpt":0.3909182015141656,"score_spread":0.3457783674786957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7116840615","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926728,0.0035824487,0.00006948564,0.00290911,0.00026534713,0.00029390317,0.00014020369,0.0000024148146,0.00006430175],"genre_scores_gemma":[0.9984529,0.00051878905,0.00016210816,0.0006682797,0.00007364802,0.0000018098086,0.0000074239433,0.0000043782557,0.00011063243],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979028,0.00021830031,0.001497788,0.00016972612,0.00005657347,0.00015478818],"domain_scores_gemma":[0.9956982,0.002303753,0.001069285,0.00021089538,0.00061473285,0.000103103586],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0025981497,0.00009675387,0.00089813455,0.000042069638,0.000042462725,0.000002839858,0.00012583162,0.00019269121,0.000023272709],"category_scores_gemma":[0.0086210985,0.000056558365,0.00038194808,0.00013596629,0.0003370092,0.000038641545,0.000041975523,0.00037409973,1.0231117e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0042339396,0.00035604576,0.9553013,0.00027490658,0.00027334344,0.0000046898444,0.000057443707,3.2522593e-7,0.037132792,0.00014602448,0.0015183031,0.00070091384],"study_design_scores_gemma":[0.002970853,0.00083505566,0.98568296,0.00037791557,0.0005474459,0.0000067298292,0.00017066485,0.000015412259,0.0056973407,0.0010501628,0.0025796848,0.00006578704],"about_ca_topic_score_codex":0.00000493616,"about_ca_topic_score_gemma":0.00009287431,"teacher_disagreement_score":0.031435452,"about_ca_system_score_codex":0.000036668403,"about_ca_system_score_gemma":0.00062285655,"threshold_uncertainty_score":0.9997297},"labels":[],"label_agreement":null},{"id":"W7124764658","doi":"10.1093/jac/dkaf473","title":"Liposomal amphotericin B and renal safety: review of the evidence and clinical considerations","year":2025,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Gilead Sciences","keywords":"Nephrotoxicity; Dosing; Toxicity; Concomitant; Amphotericin B; Acute kidney injury; Amphotericin B deoxycholate; Therapeutic index","score_opus":0.023040160492055473,"score_gpt":0.3501466299765011,"score_spread":0.3271064694844456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7124764658","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94074017,0.018352233,0.00024173946,0.040038563,0.00017332133,0.0002530477,0.000003946988,0.0000032867845,0.00019367688],"genre_scores_gemma":[0.83340925,0.14899717,0.0015251212,0.015756305,0.000085464046,1.6765112e-7,2.434248e-7,0.0000054791576,0.00022077895],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99875045,0.00011668932,0.000786964,0.00012104144,0.00013749492,0.00008736434],"domain_scores_gemma":[0.9987796,0.0003366275,0.0003483927,0.00018678913,0.00029523604,0.00005333595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00090618414,0.000090499416,0.00050954864,0.00004003056,0.00007005955,0.000013279252,0.00006349629,0.00006729361,0.000053769185],"category_scores_gemma":[0.0007831358,0.00005476158,0.00019612903,0.00013295644,0.00033174176,0.00008029297,0.00002732789,0.00025953446,2.529621e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029621425,0.0005091595,0.40532953,0.0050573503,0.00052579865,0.000034662364,0.00019737016,4.823869e-7,0.5036793,0.00031548392,0.064701155,0.016687592],"study_design_scores_gemma":[0.0037083414,0.0006127653,0.8678722,0.056004018,0.00053662364,0.00061352167,0.00003888133,0.000013873242,0.060326427,0.0002812102,0.009851941,0.00014019203],"about_ca_topic_score_codex":0.000006764885,"about_ca_topic_score_gemma":0.000010456682,"teacher_disagreement_score":0.46254268,"about_ca_system_score_codex":0.000024076446,"about_ca_system_score_gemma":0.0003755848,"threshold_uncertainty_score":0.22331123},"labels":[],"label_agreement":null},{"id":"W7132888356","doi":"","title":"CRISPR-based Diagnostics for the Rapid Identification of Invasive Fungal Pathogens and Antimicrobial Resistance Biomarkers","year":2025,"lang":"","type":"dissertation","venue":"TSpace","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Echinocandin; Drug resistance; Invasive candidiasis; CRISPR; Antifungal; Candida infections; Antimicrobial; Antibiotic resistance; Infectious disease (medical specialty)","score_opus":0.023335151462913074,"score_gpt":0.3325518975542815,"score_spread":0.3092167460913684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132888356","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9141778,0.046760406,0.019675953,0.004919503,0.0029416233,0.008226348,0.0021079765,0.00006278476,0.0011276496],"genre_scores_gemma":[0.97090805,0.016744468,0.0005944317,0.00026016362,0.00017827569,0.00018424305,0.0011814607,0.000058684644,0.009890224],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963533,0.0002547515,0.0013003031,0.0010197602,0.00053326396,0.00053861784],"domain_scores_gemma":[0.9897914,0.006182724,0.0012107715,0.0011411409,0.0015243582,0.00014959175],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014334229,0.0005886792,0.0009994928,0.00026714194,0.0006156824,0.00008821634,0.00037042156,0.000581329,0.00009478557],"category_scores_gemma":[0.008959428,0.00049984816,0.0004772288,0.0006348662,0.00055162335,0.0000825652,0.000043204134,0.00043168067,0.000005450325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.026319591,0.0011277058,0.030844526,0.043541104,0.0021735579,0.00005015622,0.0115703745,0.000046094836,0.8228401,0.0009408976,0.04810283,0.012443089],"study_design_scores_gemma":[0.0047837193,0.0005156048,0.29318872,0.007297943,0.00618533,0.0000019848646,0.032189913,0.00096276484,0.65156996,0.00011921727,0.0022843524,0.0009004619],"about_ca_topic_score_codex":0.00012220179,"about_ca_topic_score_gemma":0.0022361213,"teacher_disagreement_score":0.2623442,"about_ca_system_score_codex":0.00016277186,"about_ca_system_score_gemma":0.0018729493,"threshold_uncertainty_score":0.9997453},"labels":[],"label_agreement":null},{"id":"W7133037566","doi":"","title":"Population genomics of drug resistance in the pathogenic yeast Candida Albicans","year":2002,"lang":"","type":"dissertation","venue":"TSpace","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Pfizer Canada; Promotion and Mutual Aid Corporation for Private Schools of Japan; Pfizer","keywords":"Drug resistance; Candida albicans; Population genomics; Population; Genotype; Experimental evolution; Fluconazole; Corpus albicans; Genetic variation","score_opus":0.01839682746676489,"score_gpt":0.3121176881980952,"score_spread":0.2937208607313303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7133037566","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9705476,0.011289224,0.000026974263,0.0005858597,0.00039108866,0.0012768054,0.00006900763,0.00001500869,0.015798394],"genre_scores_gemma":[0.9376129,0.0024435248,0.00018042959,0.00010906732,0.00019323085,0.00003819518,0.0007182783,0.000058272926,0.05864614],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.996207,0.0004331743,0.0011308716,0.00074403157,0.0009092255,0.000575696],"domain_scores_gemma":[0.99737537,0.00024673628,0.0008112449,0.001190491,0.00024915987,0.00012701383],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011313547,0.0005034302,0.0010262871,0.00021829893,0.00018318303,0.0000329954,0.00045587117,0.00040018634,0.0007799576],"category_scores_gemma":[0.00043168323,0.00041648533,0.00035811833,0.00077854213,0.0001576909,0.000086863634,0.000022696164,0.00086282176,0.000053857268],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007589194,0.0019485388,0.49068415,0.0077913683,0.00038423605,0.00029090774,0.43421134,0.00008817906,0.04126806,0.0037101554,0.0055699684,0.006463884],"study_design_scores_gemma":[0.0012464523,0.00008655876,0.93001854,0.0013915797,0.00043009323,0.0000030654223,0.06288651,0.00016352952,0.00047584446,0.00026968546,0.0025795077,0.0004486623],"about_ca_topic_score_codex":0.004535376,"about_ca_topic_score_gemma":0.10617325,"teacher_disagreement_score":0.43933436,"about_ca_system_score_codex":0.0005157643,"about_ca_system_score_gemma":0.00037815562,"threshold_uncertainty_score":0.9998287},"labels":[],"label_agreement":null},{"id":"W7133189512","doi":"10.2310/derm.1.2005.2120","title":"An Alarming Complication of <i>Candida albicans</i> Antigen Treatment of Recalcitrant Warts","year":2005,"lang":"en","type":"article","venue":"Dermatitis","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Complication; Antigen; MEDLINE; Cosmetic Techniques","score_opus":0.02137809838142842,"score_gpt":0.30353227460742754,"score_spread":0.28215417622599914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7133189512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946474,0.00045922791,0.0010836053,0.0010326374,0.000018477856,0.00025521193,0.000043965483,0.00002031522,0.0024391564],"genre_scores_gemma":[0.99640006,0.00049331225,0.0025293694,0.00034520906,0.00004732855,0.000008026099,0.000068302346,0.000008227792,0.000100138735],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992319,0.000022443328,0.00032378556,0.00013947352,0.00016423698,0.000118179436],"domain_scores_gemma":[0.9993724,0.00002894778,0.00010289341,0.0003286289,0.00009061499,0.00007650498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000062366365,0.00008416134,0.00028836538,0.00004334917,0.000031899242,0.0000032718044,0.000044715827,0.00004300248,0.00015419102],"category_scores_gemma":[0.000010164724,0.00007012092,0.00008225278,0.00008803737,0.00007833086,0.000088970126,0.000003530478,0.000027343347,0.000008869174],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008871172,0.0014747161,0.5668277,0.00027577253,0.000109741406,0.000016269178,0.0030175715,0.000022440365,0.1858697,0.0005005721,0.0014912059,0.2403056],"study_design_scores_gemma":[0.0008001621,0.0003763818,0.78614336,0.00009100991,0.000052306208,0.000018746263,0.00012096905,0.0006209209,0.1875396,0.000033861015,0.024129368,0.00007332782],"about_ca_topic_score_codex":0.00023080083,"about_ca_topic_score_gemma":0.00023192748,"teacher_disagreement_score":0.24023227,"about_ca_system_score_codex":0.00005295731,"about_ca_system_score_gemma":0.00004857192,"threshold_uncertainty_score":0.28594482},"labels":[],"label_agreement":null},{"id":"W7135022428","doi":"10.36584/cjic.2025.004.01.169.171","title":"Should routine testing for Candidozyma auris be implemented in Canadian healthcare facilities?","year":2025,"lang":"","type":"article","venue":"Canadian Journal of Infection Control","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Candida auris; Fungal pathogen; Health care; Human ear; Clade; Transmission (telecommunications); Human health","score_opus":0.05173131749090173,"score_gpt":0.34029425980361183,"score_spread":0.2885629423127101,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7135022428","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89129734,0.009032156,0.0045023547,0.07771003,0.0056593884,0.00390723,0.0037849115,0.000020521346,0.0040860525],"genre_scores_gemma":[0.9914723,0.0000761289,0.00005511463,0.0059523885,0.0005581738,0.00003811011,0.000031974505,0.00002940958,0.0017864198],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99527556,0.00031004276,0.0019519716,0.0004142276,0.0002934896,0.0017547342],"domain_scores_gemma":[0.99303526,0.00071036903,0.00056662294,0.00035566086,0.0023702695,0.0029618393],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0029344808,0.00041207316,0.001156324,0.0021971338,0.00074032973,0.0001449739,0.00018864959,0.00042132474,0.00066639844],"category_scores_gemma":[0.008301308,0.0004288628,0.0004149583,0.0011833953,0.00019157438,0.00027225795,0.000007702424,0.0011413025,0.0000038822727],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.00047133554,0.00003378772,0.97716683,0.0006153876,0.00029113254,0.00019184363,0.0005663058,0.00012701048,0.00007951944,0.0006484872,0.008939053,0.010869306],"study_design_scores_gemma":[0.010890609,0.001646101,0.80047077,0.0019201306,0.0003920784,0.00007702433,0.0019204151,0.0019780751,0.000069705544,0.00029608485,0.17996259,0.00037638584],"about_ca_topic_score_codex":0.9843585,"about_ca_topic_score_gemma":0.99947894,"teacher_disagreement_score":0.17669603,"about_ca_system_score_codex":0.007881516,"about_ca_system_score_gemma":0.052406684,"threshold_uncertainty_score":0.9998163},"labels":[],"label_agreement":null},{"id":"W7135910869","doi":"","title":"<i>Candida albicans</i> colonization and community development","year":2011,"lang":"en","type":"book-chapter","venue":"Explore Bristol Research","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Colonization; Community development; Indigenous; Process (computing); Work (physics)","score_opus":0.24743477730658445,"score_gpt":0.37780968990325964,"score_spread":0.1303749125966752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7135910869","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06523365,0.0029858996,0.00021373449,0.00038713837,0.000106789696,0.001426608,0.000035355213,0.00010055083,0.9295103],"genre_scores_gemma":[0.42246842,0.0014142503,0.00032771,0.00013007988,0.00011336892,0.00004828311,0.0002521371,0.00008206532,0.57516366],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973501,0.00025655088,0.000436381,0.00045932463,0.0010364589,0.0004611844],"domain_scores_gemma":[0.9975433,0.00033415805,0.00010082335,0.0008231154,0.00083359634,0.00036503296],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0022396557,0.00029381714,0.0005698048,0.00028881337,0.00081743114,0.000042625383,0.00024696765,0.00041565634,0.0010821174],"category_scores_gemma":[0.00045458853,0.00027325808,0.00008213869,0.00009665084,0.00083687797,0.00008020374,0.00033606673,0.0027601088,0.00033290943],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011043645,0.002825614,0.059645563,0.009377422,0.0017395739,0.0019934594,0.06205818,2.9065717e-7,0.0019032973,0.07166732,0.3860601,0.39168555],"study_design_scores_gemma":[0.0008267374,0.0007990078,0.022533638,0.0010718,0.000061518345,0.000036984493,0.000833436,0.0000025222678,0.00045927142,0.007161355,0.96579593,0.0004177949],"about_ca_topic_score_codex":0.00032255144,"about_ca_topic_score_gemma":0.0008851008,"teacher_disagreement_score":0.5797359,"about_ca_system_score_codex":0.0004543371,"about_ca_system_score_gemma":0.0009897099,"threshold_uncertainty_score":0.999972},"labels":[],"label_agreement":null},{"id":"W7136098979","doi":"","title":"Rhino-orbital-cerebral mucormycosis associated with COVID-19 and mortality-related factors: a systematic review","year":2025,"lang":"","type":"article","venue":"Gredos (University of Salamanca)","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Diabetes mellitus; Confidence interval; Odds ratio; Mucormycosis; Complication; Mortality rate; Systematic review; MEDLINE","score_opus":0.018464080256239274,"score_gpt":0.25626845869994086,"score_spread":0.2378043784437016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7136098979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95508206,0.036980838,0.0005144012,0.0017251272,0.0001687293,0.0033869823,0.00025661304,0.00014699738,0.0017382592],"genre_scores_gemma":[0.9843878,0.007642815,0.000051684146,0.00052575977,0.000009571788,0.0000023496013,0.00012638775,0.000028540942,0.007225063],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9957941,0.00064755435,0.00096203503,0.0010379822,0.00088615355,0.0006721682],"domain_scores_gemma":[0.99584985,0.00071228854,0.0011210236,0.0011438389,0.0005255397,0.0006474665],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014877549,0.0006224477,0.0029684377,0.0003975006,0.00065084186,0.000035432877,0.00046884897,0.0005004991,0.00081140106],"category_scores_gemma":[0.0024031592,0.0005998156,0.0005157882,0.0017176399,0.0012088639,0.00047164047,0.00027972794,0.00066352513,0.000026519792],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000310669,0.0005021828,0.57295567,0.417031,0.0036197656,0.00034033094,0.0027981873,0.0000018584027,0.00006135239,0.0007925552,0.0015606217,0.000025800064],"study_design_scores_gemma":[0.005274553,0.00066087965,0.67094153,0.28689867,0.01709474,0.00002027241,0.017445887,0.00062790024,0.000015430345,0.00028370097,0.000036548292,0.00069987815],"about_ca_topic_score_codex":0.0011841164,"about_ca_topic_score_gemma":0.0018965492,"teacher_disagreement_score":0.1301323,"about_ca_system_score_codex":0.00080957497,"about_ca_system_score_gemma":0.0011801433,"threshold_uncertainty_score":0.99964535},"labels":[],"label_agreement":null},{"id":"W7161950203","doi":"10.82308/26217","title":"Manipulating the innate and adaptive immune responses to develop novel therapies for «Aspergillus fumigatus» pulmonary infections","year":2019,"lang":"en","type":"dissertation","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Aspergillus fumigatus; Immune system; Lung; Aspergillosis; Acquired immune system; Innate immune system; Airway","score_opus":0.039788143251736116,"score_gpt":0.31811921589124464,"score_spread":0.2783310726395085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7161950203","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9867179,0.0016322993,0.0017703682,0.0005712988,0.0003734527,0.0021366228,0.00004924762,0.00006086741,0.006687942],"genre_scores_gemma":[0.912243,0.00016360193,0.001754024,0.00032155216,0.000090266825,0.0001673338,0.00030083093,0.000050515064,0.08490885],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986459,0.000044692675,0.00039054576,0.0004337968,0.00022223424,0.000262842],"domain_scores_gemma":[0.99827105,0.00049466605,0.00013199035,0.00037062814,0.00066054566,0.00007114942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004465874,0.00028685346,0.0004329189,0.00014437857,0.0003421871,0.00003961403,0.000093771756,0.00023017272,0.00004859609],"category_scores_gemma":[0.0008104074,0.00018602343,0.00011592544,0.0003312897,0.00005201282,0.00006266071,0.0000377419,0.00029540795,0.000015131067],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.054389786,0.0012557156,0.18834661,0.0035698195,0.0028694202,0.000033206965,0.026145939,0.000040302115,0.60643023,0.025307775,0.0016896606,0.089921564],"study_design_scores_gemma":[0.00053597917,0.0005236984,0.9771487,0.000469141,0.00016391839,0.0000180008,0.015872888,0.0002418582,0.0021716442,0.00012709232,0.0024199286,0.00030712658],"about_ca_topic_score_codex":0.00022448579,"about_ca_topic_score_gemma":0.0009506123,"teacher_disagreement_score":0.78880215,"about_ca_system_score_codex":0.000075061995,"about_ca_system_score_gemma":0.00037527966,"threshold_uncertainty_score":0.7585815},"labels":[],"label_agreement":null},{"id":"W7161998478","doi":"10.82308/33104","title":"The secrets of Candida albicans: cell cycle genes and the underlying mechanisms of mating","year":2012,"lang":"en","type":"dissertation","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Signal transduction; Gene; Cell division; Mitosis; Candida albicans; Cell cycle; Mutant; Model organism; Function (biology); Mating","score_opus":0.017833814185117244,"score_gpt":0.2897483875266334,"score_spread":0.27191457334151614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7161998478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9596134,0.005808911,0.00040459097,0.00008339502,0.00013052576,0.0004766709,0.000006870836,0.000009700329,0.033465926],"genre_scores_gemma":[0.98939705,0.0006006169,0.00031996574,0.000031386782,0.000023090097,0.000011378424,0.000042099065,0.000016284024,0.009558121],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900407,0.00004712758,0.0003694624,0.00013897881,0.00028014806,0.00016019143],"domain_scores_gemma":[0.9988444,0.0003917028,0.00029887306,0.00029153147,0.0001296396,0.000043854136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006053116,0.00013238662,0.0003744119,0.000024826719,0.00014000147,0.000009624807,0.00009093968,0.00012156969,0.00012726699],"category_scores_gemma":[0.00009425488,0.000062921994,0.00010727152,0.00006636734,0.0001242258,0.00002927722,0.00001573895,0.00015542611,0.0000012081807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0052260244,0.00026418467,0.018933306,0.010868327,0.0007420503,0.000005107405,0.017559601,0.0000047103495,0.7622177,0.10637411,0.00026332022,0.077541545],"study_design_scores_gemma":[0.006182949,0.00047697124,0.2650085,0.0021283338,0.0023037095,0.000012079112,0.2316026,0.0013471482,0.45551857,0.034389477,0.00033438756,0.00069524976],"about_ca_topic_score_codex":0.0011312068,"about_ca_topic_score_gemma":0.003498572,"teacher_disagreement_score":0.30669913,"about_ca_system_score_codex":0.00001625193,"about_ca_system_score_gemma":0.000110596804,"threshold_uncertainty_score":0.25658843},"labels":[],"label_agreement":null},{"id":"W757845036","doi":"10.1155/2013/363250","title":"Pulmonary Mucormycosis in a Patient with Crohn Disease on Immunosuppressive Medications including Infliximab","year":2013,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Infliximab; Chills; Past medical history; Medical history; Azathioprine; Bronchiectasis; Surgery; Crohn's disease; Internal medicine; Lung; Disease","score_opus":0.005861378843924852,"score_gpt":0.23093941536673393,"score_spread":0.22507803652280908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W757845036","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933405,0.0030508884,0.000020710066,0.002689506,0.00013236073,0.0002884847,0.000044860048,0.0000065030667,0.00042622272],"genre_scores_gemma":[0.997248,0.00035062063,0.00001373401,0.0022360631,0.00007508386,0.00002347618,0.000023386432,0.000011190424,0.000018467916],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988607,0.0000870352,0.00041519763,0.00018753261,0.00012419744,0.00032531275],"domain_scores_gemma":[0.9974874,0.00016651022,0.00015571341,0.00015441756,0.00022114986,0.0018147791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010939396,0.00014502871,0.00034982635,0.00030375656,0.00012470823,0.000017730692,0.00008566432,0.00009915932,0.00073017774],"category_scores_gemma":[0.0008678271,0.00009812592,0.00008651694,0.00016484743,0.00047791982,0.00008877188,0.00001960165,0.0003760804,0.000010429601],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041954155,0.00035170294,0.97213286,0.00008867396,0.00012379167,0.00699162,0.00022574139,0.000004451719,0.0006663528,0.00011527072,0.0011795311,0.017700484],"study_design_scores_gemma":[0.0013934604,0.0007445702,0.99215776,0.00081652903,0.00011980672,0.0025630696,0.00035420473,0.000025158744,0.00002246751,0.00026048374,0.0014115388,0.00013097508],"about_ca_topic_score_codex":0.0036045432,"about_ca_topic_score_gemma":0.0038189273,"teacher_disagreement_score":0.020024898,"about_ca_system_score_codex":0.00022841591,"about_ca_system_score_gemma":0.0023744954,"threshold_uncertainty_score":0.79949343},"labels":[],"label_agreement":null},{"id":"W84298080","doi":"10.1007/978-3-642-59681-0_2","title":"Antimicrobial Chemotherapy — Today","year":2000,"lang":"en","type":"book-chapter","venue":"","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juravinski Hospital; Hamilton General Hospital","funders":"","keywords":"Chemotherapy; Antimicrobial; Antimicrobial chemotherapy; Medicine; Immunotherapy; Intensive care medicine; Antibiotics; Immunity; Vaccination; Disease; Immunology; Internal medicine; Immune system; Biology; Microbiology","score_opus":0.015181237274812362,"score_gpt":0.2547677880807089,"score_spread":0.23958655080589653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W84298080","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012207291,0.0002973767,0.000033262666,0.000994151,0.00009170038,0.00033400697,0.000020250924,0.000112173984,0.9968963],"genre_scores_gemma":[0.020404926,0.0020358786,0.0003463787,0.0045288885,0.0003972288,0.0000010631057,0.00007490499,0.000064820015,0.9721459],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99888885,0.000003650746,0.00027482669,0.00040256683,0.00022594328,0.00020419034],"domain_scores_gemma":[0.99923927,0.000018547003,0.000054320597,0.0005121487,0.00006112825,0.000114603274],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000071843126,0.00028129728,0.0005336643,0.00006406886,0.000041099058,0.000012861714,0.00008054599,0.000414882,0.047952585],"category_scores_gemma":[0.0000051291822,0.00022274214,0.000314642,0.0000142840745,0.00012719416,0.00002593762,0.000012699171,0.00035096414,0.0017828014],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036091185,0.00034591628,0.0025104561,0.00062925846,0.000733832,0.0006488587,0.00017726827,2.9725717e-7,0.007000335,0.090506025,0.6794382,0.21440044],"study_design_scores_gemma":[0.00079258013,0.00011043636,0.0011722922,0.0002683315,0.000089952904,0.000033894594,0.0000022734914,0.0000013189748,0.0009370275,0.0027510873,0.9935536,0.00028723505],"about_ca_topic_score_codex":0.000011402242,"about_ca_topic_score_gemma":0.000028206814,"teacher_disagreement_score":0.31411538,"about_ca_system_score_codex":0.00006857273,"about_ca_system_score_gemma":0.00015315766,"threshold_uncertainty_score":0.9989944},"labels":[],"label_agreement":null},{"id":"W86594966","doi":"10.4137/cmc.s874","title":"Fever and Peripheral Emboli in an Immunocompetent Host: A Case of Aspergillus Endocarditis","year":2008,"lang":"en","type":"article","venue":"Clinical medicine Cardiology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Hamilton Health Sciences","funders":"","keywords":"Medicine; Endocarditis; Infective endocarditis; Chills; Surgery; Embolectomy; Petechial rash; Aortic valve; Pulmonary embolism","score_opus":0.07723060875004382,"score_gpt":0.3951877836198712,"score_spread":0.3179571748698274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W86594966","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933697,0.0031461213,0.00012621083,0.000496185,0.00047111374,0.00035739632,0.000010165632,0.000024514726,0.001998582],"genre_scores_gemma":[0.9958037,0.0022782092,0.0002946611,0.0007548944,0.0007102582,0.000014642622,0.000016712947,0.000016626844,0.000110280715],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974879,0.00048686008,0.001022607,0.0005143208,0.00016331216,0.000324975],"domain_scores_gemma":[0.99822795,0.00060988223,0.00012084975,0.00056562794,0.00018261775,0.0002930409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010014621,0.00019093661,0.0016952155,0.00009009561,0.000058785397,0.0000011352004,0.000082834275,0.00026392506,0.00013776257],"category_scores_gemma":[0.0015823847,0.00014048282,0.00023083895,0.00013701951,0.0021497207,0.000054854947,0.00006451991,0.0005181756,0.0000039415368],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048807697,0.00010774716,0.9721112,0.000059119902,0.00011252081,0.018582335,0.00051526865,0.0000019879578,0.0011082774,0.00011984405,0.00043367673,0.006359898],"study_design_scores_gemma":[0.004372051,0.0025213917,0.97541285,0.000097920594,0.00011277473,0.01518486,0.0009133481,0.000055373337,0.00001723653,0.000068520414,0.0011249174,0.00011873903],"about_ca_topic_score_codex":0.00025736183,"about_ca_topic_score_gemma":0.00007643044,"teacher_disagreement_score":0.006241159,"about_ca_system_score_codex":0.00004775101,"about_ca_system_score_gemma":0.00013893898,"threshold_uncertainty_score":0.79207355},"labels":[],"label_agreement":null}]}